메뉴 건너뛰기




Volumn 10, Issue , 2010, Pages

Validation of reference genes as internal control for studying viral infections in cereals by quantitative real-time RT-PCR

Author keywords

[No Author keywords available]

Indexed keywords

AVENA; BARLEY YELLOW DWARF VIRUS; EUKARYOTA; HORDEUM; LUTEOVIRUS; TRITICUM AESTIVUM;

EID: 79959903517     PISSN: None     EISSN: 14712229     Source Type: Journal    
DOI: 10.1186/1471-2229-10-146     Document Type: Article
Times cited : (166)

References (20)
  • 1
    • 28544433382 scopus 로고    scopus 로고
    • Relationships of Barley yellow dwarf virus-PAV and Cereal yellow dwarf virus-RPV from Iran with viruses of the family Luteoviridae
    • 4
    • Rastgou M, Khatabi B, Kvarnheden A, Izadpanah K. Relationships of Barley yellow dwarf virus-PAV and Cereal yellow dwarf virus-RPV from Iran with viruses of the family Luteoviridae. Eur J Plant Pathology 2005, 113:321-326. 4.
    • (2005) Eur J Plant Pathology , vol.113 , pp. 321-326
    • Rastgou, M.1    Khatabi, B.2    Kvarnheden, A.3    Izadpanah, K.4
  • 2
    • 0001814567 scopus 로고    scopus 로고
    • Symptomatology and host range of barley yellow dwarf
    • APS Press, St. Paul MN, D'Arcy CJ, Burnett PA
    • D'Arcy CJ. Symptomatology and host range of barley yellow dwarf. Barley yellow dwarf: 40 years of progress 2005, 9-28. APS Press, St. Paul MN, D'Arcy CJ, Burnett PA.
    • (2005) Barley yellow dwarf: 40 years of progress , pp. 9-28
    • D'Arcy, C.J.1
  • 3
    • 0001573328 scopus 로고
    • Responses of plants to viruses: proposals for the use of terms
    • Cooper JI, Jones AT. Responses of plants to viruses: proposals for the use of terms. Phytopathology 1983, 73(2):127-128.
    • (1983) Phytopathology , vol.73 , Issue.2 , pp. 127-128
    • Cooper, J.I.1    Jones, A.T.2
  • 4
    • 0002379651 scopus 로고
    • Photorespiration and photoinhibition: some implications for the energetics of photosynthesis
    • Osmond CB. Photorespiration and photoinhibition: some implications for the energetics of photosynthesis. Biochim Biophys Acta 1981, 639:77-98.
    • (1981) Biochim Biophys Acta , vol.639 , pp. 77-98
    • Osmond, C.B.1
  • 5
    • 0038449034 scopus 로고    scopus 로고
    • Effects of changing temperature on virus diseases
    • Kassanis B. Effects of changing temperature on virus diseases. Adv Virus Res 2003, IV:221-241.
    • (2003) Adv Virus Res , vol.IV , pp. 221-241
    • Kassanis, B.1
  • 6
    • 0003786083 scopus 로고    scopus 로고
    • Matthew's plant virology
    • Academic Press, Fourth
    • Hull R. Matthew's plant virology. 2002, 1056. Academic Press, Fourth.
    • (2002) , pp. 1056
    • Hull, R.1
  • 7
    • 33646131607 scopus 로고    scopus 로고
    • The molecular diversity of Dscam is functionally required for neuronal wiring specificity in Drosophila
    • 10.1016/j.cell.2006.03.034, 16678102
    • Chen BE, Kondo M, Garnier A, Watson FL, Puettmann-Holgado R, Lamar DR, Schmucker D. The molecular diversity of Dscam is functionally required for neuronal wiring specificity in Drosophila. Cell 2006, 125(3):607-620. 10.1016/j.cell.2006.03.034, 16678102.
    • (2006) Cell , vol.125 , Issue.3 , pp. 607-620
    • Chen, B.E.1    Kondo, M.2    Garnier, A.3    Watson, F.L.4    Puettmann-Holgado, R.5    Lamar, D.R.6    Schmucker, D.7
  • 8
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • 10.1093/nar/29.9.e45, 55695, 11328886
    • Pfaffl MW. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 2001, 29:e45. 10.1093/nar/29.9.e45, 55695, 11328886.
    • (2001) Nucleic Acids Res , vol.29
    • Pfaffl, M.W.1
  • 9
    • 44849085483 scopus 로고    scopus 로고
    • Exercise induced stress in horses: selection of the most stable reference genes for quantitative RT-PCR normalization
    • 10.1186/1471-2199-9-49, 2412902, 18489742
    • Cappelli K, Felicetti M, Capomaccio S, Spinsanti G, Silvestrelli M, Supplizi AV. Exercise induced stress in horses: selection of the most stable reference genes for quantitative RT-PCR normalization. BMC Mol Biol 2008, 9:49. 10.1186/1471-2199-9-49, 2412902, 18489742.
    • (2008) BMC Mol Biol , vol.9 , pp. 49
    • Cappelli, K.1    Felicetti, M.2    Capomaccio, S.3    Spinsanti, G.4    Silvestrelli, M.5    Supplizi, A.V.6
  • 10
    • 14044265394 scopus 로고    scopus 로고
    • Pitfalls of quantitative real-time reverse-transcription polymerase chain reaction
    • 2291693, 15331581
    • Bustin SA, Nolan T. Pitfalls of quantitative real-time reverse-transcription polymerase chain reaction. J Biomol Tech 2004, 15:155-66. 2291693, 15331581.
    • (2004) J Biomol Tech , vol.15 , pp. 155-166
    • Bustin, S.A.1    Nolan, T.2
  • 11
    • 0141788579 scopus 로고    scopus 로고
    • Influence of zinc deficiency on the mRNA expression of zinc transporters in adult rats
    • 10.1016/S0946-672X(03)80005-6, 14531638
    • Pfaffl MW, Windisch W. Influence of zinc deficiency on the mRNA expression of zinc transporters in adult rats. J Trace Elem Med Biol 2003, 17:97-106. 10.1016/S0946-672X(03)80005-6, 14531638.
    • (2003) J Trace Elem Med Biol , vol.17 , pp. 97-106
    • Pfaffl, M.W.1    Windisch, W.2
  • 12
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal reference genes
    • Vandesompele J, De Preter K, Pattyn F, Poppe B, Van Roy N, De Paepe A, Speleman F. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal reference genes. Genome Biology 2002, 3:research0034.1-0034.11.
    • (2002) Genome Biology , vol.3
    • Vandesompele, J.1    De Preter, K.2    Pattyn, F.3    Poppe, B.4    Van Roy, N.5    De Paepe, A.6    Speleman, F.7
  • 13
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable reference genes differentially regulated target genes and sample integrity: BestKeeper--Excel-based tool using pair-wise correlations
    • 10.1023/B:BILE.0000019559.84305.47, 15127793
    • Pfaffl MW, Tichopad A, Prgomet C, Neuvians TP. Determination of stable reference genes differentially regulated target genes and sample integrity: BestKeeper--Excel-based tool using pair-wise correlations. Biotechnol Lett 2004, 26:509-15. 10.1023/B:BILE.0000019559.84305.47, 15127793.
    • (2004) Biotechnol Lett , vol.26 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 14
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization applied to bladder and colon cancer data sets
    • 10.1158/0008-5472.CAN-04-0496, 15289330
    • Andersen CL, Jensen JL, Orntoft TF. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization applied to bladder and colon cancer data sets. Cancer Res 2004, 64:5245-50. 10.1158/0008-5472.CAN-04-0496, 15289330.
    • (2004) Cancer Res , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Orntoft, T.F.3
  • 15
    • 5444258598 scopus 로고    scopus 로고
    • Validating internal controls for quantitative plant gene expression studies
    • 10.1186/1471-2229-4-14, 515301, 15317655
    • Brunner A, Yakovlev I, Straus S. Validating internal controls for quantitative plant gene expression studies. BMC Plant Biology 2004, 4:14. 10.1186/1471-2229-4-14, 515301, 15317655.
    • (2004) BMC Plant Biology , vol.4 , pp. 14
    • Brunner, A.1    Yakovlev, I.2    Straus, S.3
  • 16
    • 33847321126 scopus 로고    scopus 로고
    • A combined strategy of "in silico" transcriptome analysis and web search engine optimization allows an agile identification of reference genes suitable for normalization in gene expression studies
    • 10.1007/s11103-006-9116-9, 17143578
    • Faccioli P, Ciceri GP, Provero P, Stanca AM, Morcia C, Terzi V. A combined strategy of "in silico" transcriptome analysis and web search engine optimization allows an agile identification of reference genes suitable for normalization in gene expression studies. Plant Mol Biol 2007, 63:679-688. 10.1007/s11103-006-9116-9, 17143578.
    • (2007) Plant Mol Biol , vol.63 , pp. 679-688
    • Faccioli, P.1    Ciceri, G.P.2    Provero, P.3    Stanca, A.M.4    Morcia, C.5    Terzi, V.6
  • 17
    • 33646854724 scopus 로고    scopus 로고
    • Validation of reference genes as internal control for studying gene expression in rice by quantitative real-time PCR
    • 10.1016/j.bbrc.2006.04.140, 16690022
    • Jain M, Nijhawan A, Tyagi AK, Khurana JP. Validation of reference genes as internal control for studying gene expression in rice by quantitative real-time PCR. Biochem Biophys Res Commun 2006, 345:646-651. 10.1016/j.bbrc.2006.04.140, 16690022.
    • (2006) Biochem Biophys Res Commun , vol.345 , pp. 646-651
    • Jain, M.1    Nijhawan, A.2    Tyagi, A.K.3    Khurana, J.P.4
  • 18
    • 27144456802 scopus 로고    scopus 로고
    • Reference gene selection for RT-qPCRnormalization in potato during biotic and abiotic stress
    • 10.1093/jxb/eri285, 16188960
    • Nicot N, Hausman J-F, Hoffmann L, Evers D. Reference gene selection for RT-qPCRnormalization in potato during biotic and abiotic stress. J Exp Bot 2005, 56:2907-2914. 10.1093/jxb/eri285, 16188960.
    • (2005) J Exp Bot , vol.56 , pp. 2907-2914
    • Nicot, N.1    Hausman, J.-F.2    Hoffmann, L.3    Evers, D.4
  • 19
    • 33750461583 scopus 로고    scopus 로고
    • Expression Profiling of the 14-3-3 Gene Family in Response to Salt Stress and Potassium and Iron Deficiencies in Young Tomato (Solanum lycopersicum) Roots: Analysis by Real-time RT-PCR
    • 10.1093/aob/mcl189, 2803592, 16943217
    • Xu WF, Shi WM. Expression Profiling of the 14-3-3 Gene Family in Response to Salt Stress and Potassium and Iron Deficiencies in Young Tomato (Solanum lycopersicum) Roots: Analysis by Real-time RT-PCR. Ann Bot 2006, 98:965-974. 10.1093/aob/mcl189, 2803592, 16943217.
    • (2006) Ann Bot , vol.98 , pp. 965-974
    • Xu, W.F.1    Shi, W.M.2
  • 20
    • 0242276357 scopus 로고    scopus 로고
    • Barley yellow dwarf virus and Cereal yellow dwarf virus quantification by real-time polymerase chain reaction in resistant and susceptible plants
    • 10.1094/PHYTO.2003.93.11.1386, 18944066
    • Balaji B, Bucholtz DB, Anderson JM. Barley yellow dwarf virus and Cereal yellow dwarf virus quantification by real-time polymerase chain reaction in resistant and susceptible plants. Phytopathology 2003, 93:1386-1392. 10.1094/PHYTO.2003.93.11.1386, 18944066.
    • (2003) Phytopathology , vol.93 , pp. 1386-1392
    • Balaji, B.1    Bucholtz, D.B.2    Anderson, J.M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.