Bacterial expression systems for recombinant protein production: E. coli and beyond

Biotechnology Advances

Volumn 30, Issue 5, 2012, Pages 1102-1107

  Chen, Rachel ^a  

^a Georgia Institute of Technology   (United States)

Author keywords

Bacterial expression system; E. coli; Lactoccocus lactis; Pseudomonas expression system; Recombinant protein production; Streptomyces expression system

Indexed keywords

BACTERIAL EXPRESSION SYSTEMS; E. COLI; EXPRESSION SYSTEM; LACTOCCOCUS LACTIS; RECOMBINANT PROTEIN PRODUCTIONS;

BACTERIA; BIOLOGICAL MEMBRANES; RECOMBINANT PROTEINS;

ESCHERICHIA COLI;

MEMBRANE PROTEIN; RECOMBINANT PROTEIN;

BACTERIUM; GENE EXPRESSION; MEMBRANE; NICHE; PLASMID; PROTEIN; RECOMBINATION;

ARTICLE; BIOSYNTHESIS; ESCHERICHIA COLI; METABOLISM; PLASMID; PROTEIN PROCESSING; PSEUDOMONAS;

ESCHERICHIA COLI; MEMBRANE PROTEINS; PLASMIDS; PROTEIN PROCESSING, POST-TRANSLATIONAL; PSEUDOMONAS; RECOMBINANT PROTEINS;

BACTERIA (MICROORGANISMS); CORYNEBACTERIACEAE; ESCHERICHIA COLI; PSEUDOMONAS; STREPTOMYCES;

EID: 84862740614     PISSN: 07349750     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.biotechadv.2011.09.013     Document Type: Article

References (65)

1. Acharya A., Xu X.J., Husain-Ponnampalam R.D., Hoffmann-Benning S., Kuo M.H. Production of constitutively acetylated recombinant p53 from yeast and Escherchia coli by tethered catalysis. Protein Expr Purif 2005, 41:417-425.
2. Berntsson R.P.A., Alia Oktaviani N., Fusetti F., Thunnissen A.M.W.H., Poolman B., Slotboom D.J. Selenomethionine incorporation in proteins expressed in Lactococcus lactis. Protein Science 2009, 18:1121-1127.
3. Bill R.M., Henderson P.J.F., Iwata S., Kunji E.R.S., Michel H., Neutze R., et al. Overcoming barriers to membrane protein sturcture determination. Nat Biotechnol 2011, 29:335-340.
4. Dammeyer T., Steinwand M., Krüger S.C., Dübel S., Hust M., Timmis K. Efficient production of soluble recombiant single chain Fv fragments by a Pseudomanas putida KT2440 cell factory. Microb Cell Fact 2011, 10.
5. De Marco A. Biotechnological applications of recombinant single-domain antibody fragments. Microb Cell Fact 2011, 10.
6. Demain A.L., Vaishnav P. Production of recombinant proteins by microbes and higher organisms. Biotechnol Adv 2009, 27:297-306.
7. Derouazi M., Toussaint B., Quenee L., Epaulard O., Guillaume M., Marlu R., et al. High-yield production of secreted active proteins by the Pseudomonas aeruginosa type III secretion system. Appl Environ Microbiol 2008, 74:3601-3604.
8. Fang H., Zhang X., Shen L., Si X., Ren Y., Dai H., et al. RimJ is responsible for N(alpha)-acetylation of thymosin alpha1 in Escherichia coli. Appl Microbiol Biotechnol 2009, 84:99-104.
9. Feldman M.F., Wacker M., Hernandez M., Hitchen P.G., Marolda C.L., Kowarik M., et al. Engineering N-linked protein glycosylation with diverse O antigen lipopolysaccharide structures in Escherichia coli. Proc Natl Acad Sci U S A 2005, 102:3016-3021.
10. Fernandez A., Horn N., Wegmann U., Nicoletti C., Gasson M.J., Narbad A. Enhanced secretion of biologically active murine interleukin-12 by Lactococcus lactis. Appl Environ Microbiol 2009, 75:869-871.
11. Fisher A.C., Haitjema C.H., Guarino C., Celik E., Endicott C.E., Reading C.A., et al. Production of secretory and extracellular N-Linked glycoproteins in Escherichia coli. Appl Environ Microbiol 2011, 77:871-881.
12. Freket-Barrand A., Boutigny S. Lactococcus lactis, an alternative system for functional expression of peripheral and intrinsic arabidopsis membrane proteins. PLoS One 2010, 5.
13. Geertsma E.R., Groeneveld M., Slotboom D.J., Poolman B. Quality control of overexpressed membrane proteins. PNAS 2008, 105:5722-5727.
14. Goh S., Liam G. Plasmid selection in Escherichia coli using an endogenous essential gene marker. BMC Biotechnol 2008, 8.
15. Gordon E., Horsefield R., Swarts H.G.P., De Pont J.J.H.H.M., Neutze R., Snijder A. Effective high-throughput overproduction of membrane proteins in Escherichia coli. Protein Expr Purif 2008, 62:1-8.
16. Hagg P., de Pohl J., Abdulkarim F., Isaksson L.A. A host/plasmid system that is not dependent on antibiotics and antibiotic resistance genes for stable plasmid maintenance in Escherichia coli. J Biotechnol 2004, 111:17-30.
17. Huang K., Badger M., Haney K., Evans S. Large scale production of Bacillus thuringiensis PS149B1 insecticidal proteins Cry34Ab1 and Cry35Ab1 from Pseudomonas fluorescens. Protein Expr Purif 2007, 53:325-330.
18. Ihssen J., Kowarik M., Dilettoso S., Tanner C., Wacker M., Thoxy-Meyer L. Production of glycoprotein vaccines in Escherichia coli. Microb Cell Fact 2010, 9.
19. Itaya H., Kitochi Y. Secretion of Streptomyces mobaraensis pro-transglutaminase by coryneform bacteria. Appl Microbiol Biotechnol 2008, 78:621-625.
20. Jin H., Cantin G.T., Maki S., Chew L.C., Resnick S.M., Ngai J., et al. Soluble periplasmic production of human granulocyte cology-stimulating factor (G-CSF) in Pseudomonas fluorescens. Protein Expr Purif 2011, 78:69-77.
21. Johnson M., Coulton A.T., Geeves M.A., Mulvihill D.P. Targeted amino-terminal acetylation of recombinant proteins in E. coli. PLoS One 2010, 5:1-5.
22. Jong W.S.P., Saun A., Luirink J. Extracellular production of recombinant proteins using bacterial autotransporters. Curr Opin Biotechnol 2010, 21:642-652.
23. Koehn J., Hunt I. High-throughput protein production (HTPP): a review of enabling technologies to expedite protein production. Methods Mol Biol 2009, 498:1-18. [L High Throughput Protein Expression and Purification].
24. Kroll J., Steinle A., Reichelt R., Ewering C., Steinbuchel A. Establishment of a novel anabolism-based addition system with an artificially introduced mevalonate pathway: complete stabilization of plasmids as universal application in white biotechnology. Metab Eng 2009, 11:168-177.
25. Kroll J., Klinter S., Schneider C., Vob I., Steinbuchel A. Plasmid addition systems: perspectives and applications in biotechnology. Microb Biotechnol 2010, 3:634-657.
26. Kroll J., Klinter S., Steinbuchel A. A novel plasmid addiction system for large scale production of cyanophycin in Escherichia coli using mineral salts medium. Appl Microbiol Biotechnol 2011, 89.
27. Krzeslak J., Braun P., Voulhoux R., Cool R., Quax W. Heterologous production of Eschericia coli penicillin G acylase in Pseudomanas aeruginosa. J Biotechnol 2009, 142:250-258.
28. Kunji E.R.S., Slotboom D.-J., Poolman B. Lactococcus lactis as host for overproduction of functional membrane proteins. Biochim Biophys Acta 2003, 1610:97-108.
29. Liang X., Zhang L., Zhong J., Huan L. Secretory expression of a heterologous nattokinase in Lactococcus lactis. Appl Microbiol Biotechnol 2006, 24:285-295.
30. Linares D.M., Geertsma E.R., Poolman B. Evoled Lactococcus lactix strains for enhanced expression of recombinant membrane proteins. J Mol Biol 2010, 401:45-55.
31. Lizak C., Fan Y., Web T.C., Aebi M. N-Linked glycosylation of antibody fragments in Escherichia coli. Bioconjug Chem 2011, 22:488-496.
32. Luo L., Wang C. Cloning of Nisin resistent gene nisI from Lactococcus lactis and its application as a food grade selection marker. Wei Sheng Wu Xue Bao 2009, 49:1229-1233.
33. Maischberger T., Mierau I., Peterbauer C.K., Hugenholtz J., Haltrich D. High-level expression of Lactobacillus beta-galactosidases in Lactococcus lactis using the food-grade, nisin-controlled expression system NICE. J Agric Food Chem 2010, 58:2279-2287.
34. Makino T., Skretas G., Georgiou G. Strain engineering for improved expression of recombinant proteins in bacteria. Microb Cell Fact 2011, 10.
35. Makino T., Skretas G., Kang T., Georgiou G. Comprehensive engineering of Escherichia coli for enhanced expression of IgG antibodies. Metab Eng 2011, 13:241-251.
36. Marreddy R.K., Geertsma E.R., Permentier H.P., Pinto J.P., Kok J., Poolman B. Amino acid accumulation limits the overexpression of proteins in Lactococcus lactis. PLoS One 2010, 26.
37. Morello E., Bermudez-Humaran L.G., Llull D., Sole V., Miraglio N., P.L, et al. Lactococcus lactis, an efficient cell factory for recombinant protein production and secretion. J Mol Microbiol 2008, 14:48-58.
38. Murata T., Shinozuka Y., Obata Y., Yokoyama K.K. Phosphorylation of two eukaryotic transcription fcators Jun dimerization protein 2 and activation transcription factor 2 in Escherichia coli by Jun N-terminal kinasse 1. Anal Biochem 2008, 376.
39. Nagayoshi C., Ishibaxhi M., Tokunaga M. Purification and characterization of human brain serine racemase expressin moderately halophilic bacteria. Protein Pept Lett 2009, 16:201-206.
40. Narita J., Ishida S., Okano K., Kimura S., Fukuda H., Kondo A. Improvement of protein production in lactic acid bacteria using 5' untraslated leader sequence of slpa from Lactobacillus acidophilus. Appl Microbiol Biotechnol 2006, 73:366-373.
41. Newmann H., Peak-Chew S.Y., J.W C Genetically encoding Ne-acetylllysine in recombinant proteins. Nat Chem Biol 2008, 4:232-234.
42. Ni Y., Chen R. Extracellular recombinant protein production from Escherichia coli. Biotechnol Lett 2009, 31:1661-1670.
43. Nijland R., Kuipers O.P. Optimization of protein secretion by Bacillus subtilis. Recent Pat Biotechnol 2008, 2:79-87.
44. Niu Y., Kong J., Xu Y. A novel GFP-fusion eukaryotic membrane protein expression system in Lactococcus lactis and its application to overexpression of an elongase. Curr Microbiol 2008, 57:423-428.
45. Noda S., Ito Y., Shimizu N., Tanaka T., Ogino C., Kondo A. Over-production of various secretory-form proteins in Streptomyces lividans. Protein Expr Purif 2010, 73:198-202.
46. Pandhal H., Ow S.Y., Noirel J., Wright P.C. Improving N-glycosylation efficiency in Escherichia coli using shotgun proteomics metabolic network analysis, and selective reaction monitoring. Biotechnol Bioeng 2011, 108:902-912.
47. Peubez I., Chaudet N., Mignon C., Hild G., Husson S., Courtois V., et al. Antibiotic-free selection in E. coli: new considerations for optimal design and improved production. Microb Cell Fact 2010, 9.
48. Pohl S., Harwood C.R. Heterologous protein secretion by Bacillus species from the cradel to the grave. Adv Appl Microbiol 2010, 73:1-25.
49. Ren Y., Yao X., Dai H., Li S., Fang H., Chen H., et al. Production of N-acetylated thymosin alpha 1 in Escherichia coli. Microb Cell Fact 2011, 10.
50. Retallack D.M., Schneider J.C., Mitchell J., Chew L., Liu H. Transport of heterologous proteins to the periplamic space of Pseudomonas fluorescens using a variety of native signal sequences. Biotechnol Lett 2007, 29:1483-1491.
51. Sevastsyanovich Y.R., Alfasi S.N., Cole J.A. Sense and nonsense from a systems biology approach to microbial recombinant protein production. Biotechnol Appl Biochem 2010, 55:9-28.
52. Sirén N., Salonen K., Leisola M., Nyyssölä A. A new and efficient phosphate starvation inducible expression system for Lactococcus lactis. Appl Microbiol Biotechnol 2008, 79:803-810.
53. Sriraman K., Jayaraman G. Enhancement of recombinant streptokinase production in Lactococcus lactis by suppression of acid tolerance response. Appl Microbiol Biotechnol 2006, 72:1202-1209.
54. Steen A., Wiederhold E., Gandhi T., Breitling R., Slotboom D.J. Physiological adaptation of the bacterium Lactococcus lactis in response to the production human CFTR. Cell Mol Proteomics 2010, 10. [page number not found].
55. Surade S., Klein M., Stolt-Bergner P.C., Muenke C., Roy A., Michel H. Comparative analysis and "expression space" coverage of the production of prokaryotic membrane proteins for structural genomics. Protein Sci 2006, 15:2178-2189.
56. Tokunaga H., Arakawa T., Tokunaga M. Novel soluble expression technologies derived from unique properties of halophilic proteins. Appl Microbiol Biotechnol 2010, 88:1223-1231.
57. Vrancken K., Anne J. Secretory production of recombinant proteins by Streptomyces. Future Microbiol 2009, 4:181-188.
58. Wacker M., Linton D., Hitchen P.G., Nita-Lazar M., Haslam S.M., North S.J., et al. N-linked glycosylation in Campylobacter jejuni and its functional transfer into E. coli. Science 2002, 298:1790-1793.
59. Wacker M., Feldman M.F., Callewaert N., Kowarik M., Clarke B.R., Pohl N.L., et al. Substrate specificity of bacterial oligosaccharyltransferase suggests a common transfer mechanism for the bacterial and eukaryotic systems. Proc Natl Acad Sci U S A 2006, 103:7088-7093.
60. Wong C.F., Salleh A.B., Basri M., Rahman R. Organic-solvent stability of elastase strain K overexpressed in an Escherichia-Pseudomonas expression system. Biotechnol Appl Biochem 2010, 57:1-7.
61. Xu B., Cao Y.S., Chen Y., Guo X.H. Construction of food-grade inducible expression system in Lactococcus lactis and expression of fusion OprF/H from Pseudomonas aeruginosa. Wei Sheng Wu Xue Bao 2007, 47:604-609.
62. Yeh C.-M., Kao B.-Y., Peng H.-J. Production of a recombinant type 1 antifreeze protein anlogue by L. lactis and its applications on frozen meat and frozen dough. J Agric Food Chem 2009, 57:6216-6223.
63. Zerbs S., Frank A.M., Collart F.R. Bacterial systems for production of heterologous proteins. Methods Enzymol 2009, 463:149-167.
64. Zhang D., Zhu Y., Chen J. Microbial tranglutaminase production: understanding the mechanism. Biotechnol Genet Eng Rev 2009, 26:205-222.
65. Zhou X.X., Li W.F., Ma G.X., Pan Y.J. The nisin-controlled gene expression system: construction, application and improvements. Biotechnol Adv 2006, 24:285-295.