-
1
-
-
0023433855
-
Supercoiling of the DNA template during transcription
-
Liu, L. F., and Wang, J. C. (1987) Supercoiling of the DNA template during transcription. Proc. Natl. Acad. Sci. U.S.A. 84, 7024-7027
-
(1987)
Proc. Natl. Acad. Sci. U.S.A.
, vol.84
, pp. 7024-7027
-
-
Liu, L.F.1
Wang, J.C.2
-
2
-
-
0034923502
-
DNA topoisomerases: Structure, function, and mechanism
-
Champoux, J. J. (2001) DNA topoisomerases: structure, function, and mechanism. Annu. Rev. Biochem. 70, 369-413
-
(2001)
Annu. Rev. Biochem.
, vol.70
, pp. 369-413
-
-
Champoux, J.J.1
-
3
-
-
77954187741
-
DNA topoisomerases and their poisoning by anticancer and antibacterial drugs
-
Pommier, Y., Leo, E., Zhang, H., and Marchand, C. (2010) DNA topoisomerases and their poisoning by anticancer and antibacterial drugs. Chem. Biol. 17, 421-433
-
(2010)
Chem. Biol.
, vol.17
, pp. 421-433
-
-
Pommier, Y.1
Leo, E.2
Zhang, H.3
Marchand, C.4
-
4
-
-
0032489675
-
A model for the mechanism of human topoisomerase I
-
DOI 10.1126/science.279.5356.1534
-
Stewart, L., Redinbo, M. R., Qiu, X., Hol, W. G., and Champoux, J. J. (1998) A model for the mechanism of human topoisomerase I. Science 279, 1534-1541 (Pubitemid 28217077)
-
(1998)
Science
, vol.279
, Issue.5356
, pp. 1534-1541
-
-
Stewart, L.1
Redinbo, M.R.2
Qiu, X.3
Hol, W.G.J.4
Champoux, J.J.5
-
5
-
-
15844383117
-
Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB
-
DOI 10.1038/nature03395
-
Koster, D. A., Croquette, V., Dekker, C., Shuman, S., and Dekker, N. H. (2005) Friction and torque govern the relaxation of DNA supercoils by eukaryotic topoisomerase IB. Nature 434, 671-674 (Pubitemid 40488562)
-
(2005)
Nature
, vol.434
, Issue.7033
, pp. 671-674
-
-
Koster, D.A.1
Croquette, V.2
Dekker, C.3
Shuman, S.4
Dekker, N.H.5
-
6
-
-
79551570800
-
Role of tyrosyl-DNA phosphodiesterase (TDP1) in mitochondria
-
Das, B. B., Dexheimer, T. S., Maddali, K., and Pommier, Y. (2010) Role of tyrosyl-DNA phosphodiesterase (TDP1) in mitochondria. Proc. Natl. Acad. Sci. U.S.A. 107, 19790-19795
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 19790-19795
-
-
Das, B.B.1
Dexheimer, T.S.2
Maddali, K.3
Pommier, Y.4
-
7
-
-
33749034730
-
Topoisomerase I inhibitors: Camptothecins and beyond
-
Pommier, Y. (2006) Topoisomerase I inhibitors: camptothecins and beyond. Nat. Rev. Cancer 6, 789-802
-
(2006)
Nat. Rev. Cancer
, vol.6
, pp. 789-802
-
-
Pommier, Y.1
-
8
-
-
66849113688
-
The indenoisoquinoline noncamptothecin topoisomerase I inhibitors: Update and perspectives
-
Pommier, Y., and Cushman, M. (2009) The indenoisoquinoline noncamptothecin topoisomerase I inhibitors: update and perspectives. Mol. Cancer Ther. 8, 1008-1014
-
(2009)
Mol. Cancer Ther.
, vol.8
, pp. 1008-1014
-
-
Pommier, Y.1
Cushman, M.2
-
9
-
-
84855347756
-
Interfacial inhibitors: Targeting macromolecular complexes
-
Pommier, Y., and Marchand, C. (2012) Interfacial inhibitors: targeting macromolecular complexes. Nat. Rev. Drug Discov. 11, 25-36
-
(2012)
Nat. Rev. Drug Discov.
, vol.11
, pp. 25-36
-
-
Pommier, Y.1
Marchand, C.2
-
10
-
-
0027139317
-
Interaction between replication forks and topoisomerase I-DNA cleavable complexes: Studies in a cell-free SV40 DNA replication system
-
Tsao, Y. P., Russo, A., Nyamuswa, G., Silber, R., and Liu, L. F. (1993) Interaction between replication forks and topoisomerase I-DNA cleavable complexes: studies in a cell-free SV40 DNA replication system. Cancer Res. 53, 5908-5914 (Pubitemid 24006159)
-
(1993)
Cancer Research
, vol.53
, Issue.24
, pp. 5908-5914
-
-
Tsao, Y.-P.1
Russo, A.2
Nyamuswa, G.3
Silber, R.4
Liu, L.F.5
-
11
-
-
0034124053
-
Conversion of topoisomerase I cleavage complexes on the leading strand of ribosomal DNA into 5'-phosphorylated DNA double-strand breaks by replication runoff
-
DOI 10.1128/MCB.20.11.3977-3987.2000
-
Strumberg, D., Pilon, A. A., Smith, M., Hickey, R., Malkas, L., and Pommier, Y. (2000) Conversion of topoisomerase I cleavage complexes on the leading strand of ribosomal DNA into 5′-phosphorylated DNA doublestrand breaks by replication runoff. Mol. Cell. Biol. 20, 3977-3987 (Pubitemid 30314496)
-
(2000)
Molecular and Cellular Biology
, vol.20
, Issue.11
, pp. 3977-3987
-
-
Strumberg, D.1
Pilon, A.A.2
Smith, M.3
Hickey, R.4
Malkas, L.5
Pommier, Y.6
-
12
-
-
0038820065
-
Phosphorylation of histone H2AX and activation of Mre11, Rad50, and Nbs1 in response to replication-dependent DNA double-strand breaks induced by mammalian DNA topoisomerase I cleavage complexes
-
DOI 10.1074/jbc.M300198200
-
Furuta, T., Takemura, H., Liao, Z. Y., Aune, G. J., Redon, C., Sedelnikova, O. A., Pilch, D. R., Rogakou, E. P., Celeste, A., Chen, H. T., Nussenzweig, A., Aladjem, M. I., Bonner, W. M., and Pommier, Y. (2003) Phosphorylation of histone H2AX and activation of Mre11, Rad50, and Nbs1 in response to replication-dependent DNA double-strand breaks induced by mammalian DNA to poisomerase I cleavage complexes. J. Biol. Chem. 278, 20303-20312 (Pubitemid 36799229)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.22
, pp. 20303-20312
-
-
Furuta, T.1
Takemura, H.2
Liao, Z.-Y.3
Aune, G.J.4
Redon, C.5
Sedelnikova, O.A.6
Pilch, D.R.7
Rogakou, E.P.8
Celeste, A.9
Chen, H.T.10
Nussenzweig, A.11
Aladjem, M.I.12
Bonner, W.M.13
Pommier, Y.14
-
13
-
-
34447509295
-
Antitumour drugs impede DNA uncoiling by topoisomerase I
-
DOI 10.1038/nature05938, PII NATURE05938
-
Koster, D. A., Palle, K., Bot, E. S., Bjornsti, M. A., and Dekker, N. H. (2007) Antitumour drugs impede DNA uncoiling by topoisomerase I. Nature 448, 213-217 (Pubitemid 47067371)
-
(2007)
Nature
, vol.448
, Issue.7150
, pp. 213-217
-
-
Koster, D.A.1
Palle, K.2
Bot, E.S.M.3
Bjornsti, M.-A.4
Dekker, N.H.5
-
14
-
-
47849130071
-
Hyperphosphorylation of RNA polymerase II in response to topoisomerase I cleavage complexes and its association with transcription- and BRCA1-dependent degradation of topoisomerase I
-
Sordet, O., Larochelle, S., Nicolas, E., Stevens, E. V., Zhang, C., Shokat, K. M., Fisher, R. P., and Pommier, Y. (2008) Hyperphosphorylation of RNA polymerase II in response to topoisomerase I cleavage complexes and its association with transcription- and BRCA1-dependent degradation of topoisomerase I. J. Mol. Biol. 381, 540-549
-
(2008)
J. Mol. Biol.
, vol.381
, pp. 540-549
-
-
Sordet, O.1
Larochelle, S.2
Nicolas, E.3
Stevens, E.V.4
Zhang, C.5
Shokat, K.M.6
Fisher, R.P.7
Pommier, Y.8
-
15
-
-
70449522304
-
Topoisomerase I suppresses genomic instability by preventing interference between replication and transcription
-
Tuduri, S., Crabbé, L., Conti, C., Tourrière, H., Holtgreve-Grez, H., Jauch, A., Pantesco, V., De Vos, J., Thomas, A., Theillet, C., Pommier, Y., Tazi, J., Coquelle, A., and Pasero, P. (2009) Topoisomerase I suppresses genomic instability by preventing interference between replication and transcription. Nat. Cell Biol. 11, 1315-1324
-
(2009)
Nat. Cell Biol.
, vol.11
, pp. 1315-1324
-
-
Tuduri, S.1
Crabbé, L.2
Conti, C.3
Tourrière, H.4
Holtgreve-Grez, H.5
Jauch, A.6
Pantesco, V.7
De Vos, J.8
Thomas, A.9
Theillet, C.10
Pommier, Y.11
Tazi, J.12
Coquelle, A.13
Pasero, P.14
-
16
-
-
74949110813
-
DNA double-strand breaks and ATM activation by transcription-blocking DNA lesions
-
Sordet, O., Nakamura, A. J., Redon, C. E., and Pommier, Y. (2010) DNA double-strand breaks and ATM activation by transcription-blocking DNA lesions. Cell Cycle 9, 274-278
-
(2010)
Cell Cycle
, vol.9
, pp. 274-278
-
-
Sordet, O.1
Nakamura, A.J.2
Redon, C.E.3
Pommier, Y.4
-
17
-
-
79957706011
-
Effects of DNA and protein size on substrate cleavage by human tyrosyl-DNA phosphodiesterase 1
-
Interthal, H., and Champoux, J. J. (2011) Effects of DNA and protein size on substrate cleavage by human tyrosyl-DNA phosphodiesterase 1. Biochem. J. 436, 559-566
-
(2011)
Biochem. J.
, vol.436
, pp. 559-566
-
-
Interthal, H.1
Champoux, J.J.2
-
18
-
-
0029958378
-
A eukaryotic enzyme that can disjoin dead-end covalent complexes between DNA and type I topoisomerases
-
DOI 10.1073/pnas.93.21.11534
-
Yang, S. W., Burgin, A. B., Jr., Huizenga, B. N., Robertson, C. A., Yao, K. C., and Nash, H. A. (1996) A eukaryotic enzyme that can disjoin dead-end covalent complexes between DNA and type I topoisomerases. Proc. Natl. Acad. Sci. U.S.A. 93, 11534-11539 (Pubitemid 26347156)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.21
, pp. 11534-11539
-
-
Yang, S.-W.1
Burgin Jr., A.B.2
Huizenga, B.N.3
Robertson, C.A.4
Yao, K.C.5
Nash, H.A.6
-
19
-
-
27744521320
-
Human Tdp1 cleaves a broad spectrum of substrates, including phosphoamide linkages
-
DOI 10.1074/jbc.M508898200
-
Interthal, H., Chen, H. J., and Champoux, J. J. (2005) Human Tdp1 cleaves a broad spectrum of substrates, including phosphoamide linkages. J. Biol. Chem. 280, 36518-36528 (Pubitemid 41633926)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.43
, pp. 36518-36528
-
-
Interthal, H.1
Chen, H.J.2
Champoux, J.J.3
-
20
-
-
14544268980
-
Defective DNA single-strand break repair in spinocerebellar ataxia with axonal neuropathy-1
-
DOI 10.1038/nature03314
-
El-Khamisy, S. F., Saifi, G. M., Weinfeld, M., Johansson, F., Helleday, T., Lupski, J. R., and Caldecott, K. W. (2005) Defective DNA single-strand break repair in spinocerebellar ataxia with axonal neuropathy-1. Nature 434, 108-113 (Pubitemid 40349394)
-
(2005)
Nature
, vol.434
, Issue.7029
, pp. 108-113
-
-
El-Khamisy, S.F.1
Saifi, G.M.2
Weinfeld, M.3
Johansson, F.4
Helleday, T.5
Lupski, J.R.6
Caldecott, K.W.7
-
21
-
-
33750956390
-
Hereditary ataxia SCAN1 cells are defective for the repair of transcription-dependent topoisomerase I cleavage complexes
-
DOI 10.1016/j.dnarep.2006.07.004, PII S1568786406002382
-
Miao, Z. H., Agama, K., Sordet, O., Povirk, L., Kohn, K. W., and Pommier, Y. (2006) Hereditary ataxia SCAN1 cells are defective for the repair of transcription-dependent topoisomerase I cleavage complexes. DNA Repair 5, 1489-1494 (Pubitemid 44739452)
-
(2006)
DNA Repair
, vol.5
, Issue.12
, pp. 1489-1494
-
-
Miao, Z.-H.1
Agama, K.2
Sordet, O.3
Povirk, L.4
Kohn, K.W.5
Pommier, Y.6
-
22
-
-
0034871092
-
Pathways for repair of topoisomerase I covalent complexes in Saccharomyces cerevisiae
-
DOI 10.1046/j.1365-2443.2001.00452.x
-
Pouliot, J. J., Robertson, C. A., and Nash, H. A. (2001) Pathways for repair of topoisomerase I covalent complexes in Saccharomyces cerevisiae. Genes Cells 6, 677-687 (Pubitemid 32791679)
-
(2001)
Genes to Cells
, vol.6
, Issue.8
, pp. 677-687
-
-
Pouliot, J.J.1
Robertson, C.A.2
Nash, H.A.3
-
23
-
-
0036493236
-
Processing of nucleopeptides mimicking the topoisomerase I-DNA covalent complex by tyrosyl-DNA phosphodiesterase
-
Debéthune, L., Kohlhagen, G., Grandas, A., and Pommier, Y. (2002) Processing of nucleopeptides mimicking the topoisomerase I-DNA covalent complex by tyrosyl-DNA phosphodiesterase. Nucleic Acids Res. 30, 1198-1204 (Pubitemid 34679693)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.5
, pp. 1198-1204
-
-
Debethune, L.1
Kohlhagen, G.2
Grandas, A.3
Pommier, Y.4
-
24
-
-
0024229066
-
Evidence that DNA topoisomerase I is necessary for the cytotoxic effects of camptothecin
-
Eng, W. K., Faucette, L., Johnson, R. K., and Sternglanz, R. (1988) Evidence that DNA topoisomerase I is necessary for the cytotoxic effects of camp-tothecin. Mol. Pharmacol. 34, 755-760 (Pubitemid 19014396)
-
(1988)
Molecular Pharmacology
, vol.34
, Issue.6
, pp. 755-760
-
-
Eng, W.-K.1
Faucette, L.2
Johnson, R.K.3
Sternglanz, R.4
-
25
-
-
0000536643
-
DNA topoisomerase-targeting antitumor drugs can be studied in yeast
-
Nitiss, J., and Wang, J. C. (1988) DNA topoisomerase-targeting antitumor drugs can be studied in yeast. Proc. Natl. Acad. Sci. U.S.A. 85, 7501-7505
-
(1988)
Proc. Natl. Acad. Sci. U.S.A.
, vol.85
, pp. 7501-7505
-
-
Nitiss, J.1
Wang, J.C.2
-
26
-
-
76749157216
-
Collaborative action of Brca1 and CtIP in elimination of covalent modifications from double-strand breaks to facilitate subsequent break repair
-
Nakamura, K., Kogame, T., Oshiumi, H., Shinohara, A., Sumitomo, Y., Agama, K., Pommier, Y., Tsutsui, K. M., Tsutsui, K., Hartsuiker, E., Ogi, T., Takeda, S., and Taniguchi, Y. (2010) Collaborative action of Brca1 and CtIP in elimination of covalent modifications from double-strand breaks to facilitate subsequent break repair. PLoS Genet. 6, e1000828
-
(2010)
PLoS Genet.
, vol.6
-
-
Nakamura, K.1
Kogame, T.2
Oshiumi, H.3
Shinohara, A.4
Sumitomo, Y.5
Agama, K.6
Pommier, Y.7
Tsutsui, K.M.8
Tsutsui, K.9
Hartsuiker, E.10
Ogi, T.11
Takeda, S.12
Taniguchi, Y.13
-
27
-
-
36549060102
-
Human CtIP promotes DNA end resection
-
DOI 10.1038/nature06337
-
Sartori, A. A., Lukas, C., Coates, J., Mistrik, M., Fu, S., Bartek, J., Baer, R., Lukas, J., and Jackson, S. P. (2007) Human CtIP promotes DNA end resection. Nature 450, 509-514 (Pubitemid 350190253)
-
(2007)
Nature
, vol.450
, Issue.7169
, pp. 509-514
-
-
Sartori, A.A.1
Lukas, C.2
Coates, J.3
Mistrik, M.4
Fu, S.5
Bartek, J.6
Baer, R.7
Lukas, J.8
Jackson, S.P.9
-
28
-
-
84862908473
-
Mus81-mediated DNA cleavage resolves replication forks stalled by topoisomerase I-DNA complexes
-
Regairaz, M., Zhang, Y. W., Fu, H., Agama, K. K., Tata, N., Agrawal, S., Aladjem, M. I., and Pommier, Y. (2011) Mus81-mediated DNA cleavage resolves replication forks stalled by topoisomerase I-DNA complexes. J. Cell Biol. 195, 739-749
-
(2011)
J. Cell Biol.
, vol.195
, pp. 739-749
-
-
Regairaz, M.1
Zhang, Y.W.2
Fu, H.3
Agama, K.K.4
Tata, N.5
Agrawal, S.6
Aladjem, M.I.7
Pommier, Y.8
-
29
-
-
18644386254
-
Mutation of TDP1, encoding a topoisomerase I-dependent DNA damage repair enzyme, in spinocerebellar ataxia with axonal neuropathy
-
Takashima, H., Boerkoel, C. F., John, J., Saifi, G. M., Salih, M. A., Armstrong, D., Mao, Y., Quiocho, F. A., Roa, B. B., Nakagawa, M., Stockton, D. W., and Lupski, J. R. (2002) Mutation of TDP1, encoding a topoisomerase I-dependent DNA damage repair enzyme, in spinocerebellar ataxia with axonal neuropathy. Nat. Genet. 32, 267-272
-
(2002)
Nat. Genet.
, vol.32
, pp. 267-272
-
-
Takashima, H.1
Boerkoel, C.F.2
John, J.3
Saifi, G.M.4
Salih, M.A.5
Armstrong, D.6
Mao, Y.7
Quiocho, F.A.8
Roa, B.B.9
Nakagawa, M.10
Stockton, D.W.11
Lupski, J.R.12
-
30
-
-
21844437071
-
SCAN1 mutant Tdp1 accumulates the enzyme-DNA intermediate and causes camptothecin hypersensitivity
-
DOI 10.1038/sj.emboj.7600694
-
Interthal, H., Chen, H. J., Kehl-Fie, T. E., Zotzmann, J., Leppard, J. B., and Champoux, J. J. (2005) SCAN1 mutant Tdp1 accumulates the enzyme- DNA intermediate and causes camptothecin hypersensitivity. EMBO J. 24, 2224-2233 (Pubitemid 40961806)
-
(2005)
EMBO Journal
, vol.24
, Issue.12
, pp. 2224-2233
-
-
Interthal, H.1
Chen, H.J.2
Kehl-Fie, T.E.3
Zotzmann, J.4
Leppard, J.B.5
Champoux, J.J.6
-
31
-
-
36248984333
-
TDP1 facilitates chromosomal single-strand break repair in neurons and is neuroprotective in vivo
-
DOI 10.1038/sj.emboj.7601869, PII 7601869
-
Katyal, S., el-Khamisy, S. F., Russell, H. R., Li, Y., Ju, L., Caldecott, K. W., and McKinnon, P. J. (2007) TDP1 facilitates chromosomal single-strand break repair in neurons and is neuroprotective in vivo. EMBO J. 26, 4720-4731 (Pubitemid 350126788)
-
(2007)
EMBO Journal
, vol.26
, Issue.22
, pp. 4720-4731
-
-
Katyal, S.1
El-Khamisy, S.F.2
Russell, H.R.3
Li, Y.4
Ju, L.5
Caldecott, K.W.6
McKinnon, P.J.7
-
32
-
-
36249016854
-
Spinocerebellar ataxia with axonal neuropathy: Consequence of a Tdp1 recessive neomorphic mutation?
-
DOI 10.1038/sj.emboj.7601885, PII 7601885
-
Hirano, R., Interthal, H., Huang, C., Nakamura, T., Deguchi, K., Choi, K., Bhattacharjee, M. B., Arimura, K., Umehara, F., Izumo, S., Northrop, J. L., Salih, M. A., Inoue, K., Armstrong, D. L., Champoux, J. J., Takashima, H., and Boerkoel, C. F. (2007) Spinocerebellar ataxia with axonal neuropathy: consequence of a Tdp1 recessive neomorphic mutation? EMBO J. 26, 4732-4743 (Pubitemid 350126790)
-
(2007)
EMBO Journal
, vol.26
, Issue.22
, pp. 4732-4743
-
-
Hirano, R.1
Interthal, H.2
Huang, C.3
Nakamura, T.4
Deguchi, K.5
Choi, K.6
Bhattacharjee, M.B.7
Arimura, K.8
Umehara, F.9
Izumo, S.10
Northrop, J.L.11
Salih, M.A.M.12
Inoue, K.13
Armstrong, D.L.14
Champoux, J.J.15
Takashima, H.16
Boerkoel, C.F.17
-
33
-
-
71349087405
-
Optimal function of the DNA repair enzyme TDP1 requires its phosphorylation by ATM and/or DNA-PK
-
Das, B. B., Antony, S., Gupta, S., Dexheimer, T. S., Redon, C. E., Garfield, S., Shiloh, Y., and Pommier, Y. (2009) Optimal function of the DNA repair enzyme TDP1 requires its phosphorylation by ATM and/or DNA-PK. EMBO J. 28, 3667-3680
-
(2009)
EMBO J.
, vol.28
, pp. 3667-3680
-
-
Das, B.B.1
Antony, S.2
Gupta, S.3
Dexheimer, T.S.4
Redon, C.E.5
Garfield, S.6
Shiloh, Y.7
Pommier, Y.8
-
34
-
-
63549131291
-
In vitro complementation of Tdp1 deficiency indicates a stabilized enzyme-DNA adduct from tyrosyl but not glycolate lesions as a consequence of the SCAN1 mutation
-
Hawkins, A. J., Subler, M. A., Akopiants, K., Wiley, J. L., Taylor, S. M., Rice, A. C., Windle, J. J., Valerie, K., and Povirk, L. F. (2009) In vitro complementation of Tdp1 deficiency indicates a stabilized enzyme-DNA adduct from tyrosyl but not glycolate lesions as a consequence of the SCAN1 mutation. DNA Repair 8, 654-663
-
(2009)
DNA Repair
, vol.8
, pp. 654-663
-
-
Hawkins, A.J.1
Subler, M.A.2
Akopiants, K.3
Wiley, J.L.4
Taylor, S.M.5
Rice, A.C.6
Windle, J.J.7
Valerie, K.8
Povirk, L.F.9
-
35
-
-
67349107467
-
Synergistic decrease of DNA single-strand break repair rates in mouse neural cells lacking both Tdp1 and aprataxin
-
El-Khamisy, S. F., Katyal, S., Patel, P., Ju, L., McKinnon, P. J., and Caldecott, K. W. (2009) Synergistic decrease of DNA single-strand break repair rates in mouse neural cells lacking both Tdp1 and aprataxin. DNA Repair 8, 760-766
-
(2009)
DNA Repair
, vol.8
, pp. 760-766
-
-
El-Khamisy, S.F.1
Katyal, S.2
Patel, P.3
Ju, L.4
McKinnon, P.J.5
Caldecott, K.W.6
-
36
-
-
78149442129
-
MRE11 function in response to topoisomerase poisons is independent of its function in double-strand break repair in Saccharomyces cerevisiae
-
Hamilton, N. K., and Maizels, N. (2010) MRE11 function in response to topoisomerase poisons is independent of its function in double-strand break repair in Saccharomyces cerevisiae. PLoS One 5, e15387
-
(2010)
PLoS One
, vol.5
-
-
Hamilton, N.K.1
Maizels, N.2
-
37
-
-
13744253911
-
Deficiency in 3′-phosphoglycolate processing in human cells with a hereditary mutation in tyrosyl-DNA phosphodiesterase (TDP1)
-
DOI 10.1093/nar/gki170
-
Zhou, T., Lee, J. W., Tatavarthi, H., Lupski, J. R., Valerie, K., and Povirk, L. F. (2005) Deficiency in 3′-phosphoglycolate processing in human cells with a hereditary mutation in tyrosyl-DNA phosphodiesterase (TDP1). Nucleic Acids Res. 33, 289-297 (Pubitemid 40276950)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.1
, pp. 289-297
-
-
Zhou, T.1
Lee, J.W.2
Tatavarthi, H.3
Lupski, J.R.4
Valerie, K.5
Povirk, L.F.6
-
38
-
-
79951575816
-
AP-site cleavage activity of tyrosyl-DNA phosphodiesterase 1
-
Lebedeva, N. A., Rechkunova, N. I., and Lavrik, O. I. (2011) AP-site cleavage activity of tyrosyl-DNA phosphodiesterase 1. FEBS Lett. 585, 683-686
-
(2011)
FEBS Lett.
, vol.585
, pp. 683-686
-
-
Lebedeva, N.A.1
Rechkunova, N.I.2
Lavrik, O.I.3
-
39
-
-
0037178839
-
Conversion of phosphoglycolate to phosphate termini on 3′ overhangs of DNA double strand breaks by the human tyrosyl-DNA phosphodiesterase hTdp1
-
DOI 10.1074/jbc.M204688200
-
Inamdar, K. V., Pouliot, J. J., Zhou, T., Lees-Miller, S. P., Rasouli-Nia, A., and Povirk, L. F. (2002) Conversion of phosphoglycolate to phosphate termini on 3′ overhangs of DNA double strand breaks by the human tyrosyl-DNA phosphodiesterase hTdp1. J. Biol. Chem. 277, 27162-27168 (Pubitemid 34951731)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.30
, pp. 27162-27168
-
-
Inamdar, K.V.1
Pouliot, J.J.2
Zhou, T.3
Lees-Miller, S.P.4
Rasouli-Nia, A.5
Povirk, L.F.6
-
40
-
-
0021111515
-
γ ray induced deoxyribonucleic acid strand breaks. 3′ glycolate termini
-
Henner, W. D., Rodriguez, L. O., Hecht, S. M., and Haseltine, W. A. (1983) γ ray induced deoxyribonucleic acid strand breaks. 3′ glycolate termini. J. Biol. Chem. 258, 711-713
-
(1983)
J. Biol. Chem.
, vol.258
, pp. 711-713
-
-
Henner, W.D.1
Rodriguez, L.O.2
Hecht, S.M.3
Haseltine, W.A.4
-
41
-
-
78650603715
-
Base damage immediately upstream from double-strand break ends is a more severe impediment to nonhomologous end joining than blocked 3′-termini
-
Datta, K., Purkayastha, S., Neumann, R. D., Pastwa, E., and Winters, T. A. (2011) Base damage immediately upstream from double-strand break ends is a more severe impediment to nonhomologous end joining than blocked 3′-termini. Radiat. Res. 175, 97-112
-
(2011)
Radiat. Res.
, vol.175
, pp. 97-112
-
-
Datta, K.1
Purkayastha, S.2
Neumann, R.D.3
Pastwa, E.4
Winters, T.A.5
-
42
-
-
33947541157
-
Processing of 3′-phosphoglycolate-terminated DNA double strand breaks by artemis nuclease
-
DOI 10.1074/jbc.M607745200
-
Povirk, L. F., Zhou, T., Zhou, R., Cowan, M. J., and Yannone, S. M. (2007) Processing of 3′-phosphoglycolate-terminated DNA double strand breaks by Artemis nuclease. J. Biol. Chem. 282, 3547-3558 (Pubitemid 47084423)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.6
, pp. 3547-3558
-
-
Povirk, L.F.1
Zhou, T.2
Zhou, R.3
Cowan, M.J.4
Yannone, S.M.5
-
43
-
-
0025936509
-
Increased ratio of targeted to random integration after transfection of chicken B cell lines
-
Buerstedde, J. M., and Takeda, S. (1991) Increased ratio of targeted to random integration after transfection of chicken B cell lines. Cell 67, 179-188
-
(1991)
Cell
, vol.67
, pp. 179-188
-
-
Buerstedde, J.M.1
Takeda, S.2
-
44
-
-
3242886111
-
Reverse genetic studies of the DNA damage response in the chicken B lymphocyte line DT40
-
DOI 10.1016/j.dnarep.2004.03.039, PII S1568786404001107
-
Yamazoe, M., Sonoda, E., Hochegger, H., and Takeda, S. (2004) Reverse genetic studies of the DNA damage response in the chicken B lymphocyte line DT40. DNA Repair 3, 1175-1185 (Pubitemid 38997961)
-
(2004)
DNA Repair
, vol.3
, Issue.8-9
, pp. 1175-1185
-
-
Yamazoe, M.1
Sonoda, E.2
Hochegger, H.3
Takeda, S.4
-
45
-
-
44449146141
-
Tyrosyl-DNA phosphodiesterase as a target for anticancer therapy
-
DOI 10.2174/187152008784220357
-
Dexheimer, T. S., Antony, S., Marchand, C., and Pommier, Y. (2008) Tyrosyl- DNA phosphodiesterase as a target for anticancer therapy. Anticancer Agents Med. Chem. 8, 381-389 (Pubitemid 351761423)
-
(2008)
Anti-Cancer Agents in Medicinal Chemistry
, vol.8
, Issue.4
, pp. 381-389
-
-
Dexheimer, T.S.1
Antony, S.2
Marchand, C.3
Pommier, Y.4
-
46
-
-
64649090292
-
Targeting DNA topoisomerase II in cancer chemotherapy
-
Nitiss, J. L. (2009) Targeting DNA topoisomerase II in cancer chemotherapy. Nat. Rev. Cancer 9, 338-350
-
(2009)
Nat. Rev. Cancer
, vol.9
, pp. 338-350
-
-
Nitiss, J.L.1
-
47
-
-
33745154128
-
Tyrosyl-DNA phosphodiesterase (Tdp1) participates in the repair of Top2-mediated DNA damage
-
DOI 10.1073/pnas.0603455103
-
Nitiss, K. C., Malik, M., He, X., White, S. W., and Nitiss, J. L. (2006) Tyrosyl- DNA phosphodiesterase (Tdp1) participates in the repair of Top2-mediated DNA damage. Proc. Natl. Acad. Sci. U.S.A. 103, 8953-8958 (Pubitemid 43902515)
-
(2006)
Proceedings of the National Academy of Sciences of the United States of America
, vol.103
, Issue.24
, pp. 8953-8958
-
-
Nitiss, K.C.1
Malik, M.2
He, X.3
White, S.W.4
Nitiss, J.L.5
-
48
-
-
11244283226
-
TDP1 overexpression in human cells counteracts DNA damage mediated by topoisomerases I and II
-
DOI 10.1074/jbc.M405042200
-
Barthelmes, H. U., Habermeyer, M., Christensen, M. O., Mielke, C., Interthal, H., Pouliot, J. J., Boege, F., and Marko, D. (2004) TDP1 overexpression in human cells counteracts DNA damage mediated by topoisomerases I and II. J. Biol. Chem. 279, 55618-55625 (Pubitemid 40066566)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.53
, pp. 55618-55625
-
-
Barthelmes, H.U.1
Habermeyer, M.2
Christensen, M.O.3
Mielke, C.4
Interthal, H.5
Pouliot, J.J.6
Boege, F.7
Marko, D.8
-
49
-
-
77952300162
-
The DNA binding and 3′-end preferential activity of human tyrosyl-DNA phosphodiesterase
-
Dexheimer, T. S., Stephen, A. G., Fivash, M. J., Fisher, R. J., and Pommier, Y. (2010) The DNA binding and 3′-end preferential activity of human tyrosyl-DNA phosphodiesterase. Nucleic Acids Res. 38, 2444-2452
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 2444-2452
-
-
Dexheimer, T.S.1
Stephen, A.G.2
Fivash, M.J.3
Fisher, R.J.4
Pommier, Y.5
-
50
-
-
58149289464
-
Distinct requirements for the Rad32(Mre11) nuclease and Ctp1(CtIP) in the removal of covalently bound topoisomerase I and II from DNA
-
Hartsuiker, E., Neale, M. J., and Carr, A. M. (2009) Distinct requirements for the Rad32(Mre11) nuclease and Ctp1(CtIP) in the removal of covalently bound topoisomerase I and II from DNA. Mol. Cell 33, 117-123
-
(2009)
Mol. Cell
, vol.33
, pp. 117-123
-
-
Hartsuiker, E.1
Neale, M.J.2
Carr, A.M.3
-
51
-
-
34047223844
-
Simple one-week method to construct gene-targeting vectors: Application to production of human knockout cell lines
-
DOI 10.2144/000112233
-
Iiizumi, S., Nomura, Y., So, S., Uegaki, K., Aoki, K., Shibahara, K., Adachi, N., and Koyama, H. (2006) Simple one-week method to construct gene-targeting vectors: application to production of human knockout cell lines. BioTechniques 41, 311-316 (Pubitemid 46534894)
-
(2006)
BioTechniques
, vol.41
, Issue.3
, pp. 311-316
-
-
Iiizumi, S.1
Nomura, Y.2
So, S.3
Uegaki, K.4
Aoki, K.5
Shibahara, K.-I.6
Adachi, N.7
Koyama, H.8
-
52
-
-
35948968756
-
Novel indenoisoquinolines NSC 725776 and NSC 724998 produce persistent topoisomerase I cleavage complexes and overcome multidrug resistance
-
DOI 10.1158/0008-5472.CAN-07-0938
-
Antony, S., Agama, K. K., Miao, Z. H., Takagi, K., Wright, M. H., Robles, A. I., Varticovski, L., Nagarajan, M., Morrell, A., Cushman, M., and Pommier, Y. (2007) Novel indenoisoquinolines NSC 725776 and NSC 724998 produce persistent topoisomerase I cleavage complexes and overcome multidrug resistance. Cancer Res. 67, 10397-10405 (Pubitemid 350070815)
-
(2007)
Cancer Research
, vol.67
, Issue.21
, pp. 10397-10405
-
-
Antony, S.1
Agama, K.K.2
Miao, Z.-H.3
Takagi, K.4
Wright, M.H.5
Robles, A.I.6
Varticovski, L.7
Nagarajan, M.8
Morrell, A.9
Cushman, M.10
Pommier, Y.11
-
53
-
-
0345061277
-
Association of XRCC1 and tyrosyl DNA phosphodiesterase (Tdp1) for the repair of topoisomerase I-mediated DNA lesions
-
DOI 10.1016/S1568-7864(03)00116-2
-
Plo, I., Liao, Z. Y., Barceló, J. M., Kohlhagen, G., Caldecott, K. W., Weinfeld, M., and Pommier, Y. (2003) Association of XRCC1 and tyrosyl DNA phosphodiesterase (Tdp1) for the repair of topoisomerase I-mediated DNA lesions. DNA Repair 2, 1087-1100 (Pubitemid 39662824)
-
(2003)
DNA Repair
, vol.2
, Issue.10
, pp. 1087-1100
-
-
Plo, I.1
Liao, Z.-Y.2
Barcelo, J.M.3
Kohlhagen, G.4
Caldecott, K.W.5
Weinfeld, M.6
Pommier, Y.7
-
54
-
-
67650639021
-
Tyrosyl-DNA phosphodiesterase and the repair of 3′- phosphoglycolate-terminated DNA double- Strand breaks
-
Zhou, T., Akopiants, K., Mohapatra, S., Lin, P. S., Valerie, K., Ramsden, D. A., Lees-Miller, S. P., and Povirk, L. F. (2009) Tyrosyl-DNA phosphodiesterase and the repair of 3′-phosphoglycolate-terminated DNA double- strand breaks. DNA Repair 8, 901-911
-
(2009)
DNA Repair
, vol.8
, pp. 901-911
-
-
Zhou, T.1
Akopiants, K.2
Mohapatra, S.3
Lin, P.S.4
Valerie, K.5
Ramsden, D.A.6
Lees-Miller, S.P.7
Povirk, L.F.8
-
55
-
-
0021287405
-
Methylation of the O6 position of guanine in DNA is the most likely initiating event in carcinogenesis by methylating agents
-
Pegg, A. E. (1984) Methylation of the O6 position of guanine in DNA is the most likely initiating event in carcinogenesis by methylating agents. Cancer Invest. 2, 223-231
-
(1984)
Cancer Invest.
, vol.2
, pp. 223-231
-
-
Pegg, A.E.1
-
56
-
-
2442549621
-
Hydrogen Peroxide Induces Topoisomerase I-mediated DNA Damage and Cell Death
-
DOI 10.1074/jbc.M311370200
-
Daroui, P., Desai, S. D., Li, T. K., Liu, A. A., and Liu, L. F. (2004) Hydrogen peroxide induces topoisomerase I-mediated DNA damage and cell death. J. Biol. Chem. 279, 14587-14594 (Pubitemid 38618846)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.15
, pp. 14587-14594
-
-
Daroui, P.1
Desai, S.D.2
Li, T.-K.3
Liu, A.A.4
Liu, L.F.5
-
57
-
-
3242710517
-
AP endonuclease-independent DNA base excision repair in human cells
-
DOI 10.1016/j.molcel.2004.06.003, PII S1097276504003363
-
Wiederhold, L., Leppard, J. B., Kedar, P., Karimi-Busheri, F., Rasouli-Nia, A., Weinfeld, M., Tomkinson, A. E., Izumi, T., Prasad, R., Wilson, S. H., Mitra, S., and Hazra, T. K. (2004) AP endonuclease-independent DNA base excision repair in human cells. Mol. Cell 15, 209-220 (Pubitemid 38950968)
-
(2004)
Molecular Cell
, vol.15
, Issue.2
, pp. 209-220
-
-
Wiederhold, L.1
Leppard, J.B.2
Kedar, P.3
Karimi-Busheri, F.4
Rasouli-Nia, A.5
Weinfeld, M.6
Tomkinson, A.E.7
Izumi, T.8
Prasad, R.9
Wilson, S.H.10
Mitra, S.11
Hazra, T.K.12
-
58
-
-
0033569666
-
Yeast gene for a Tyr-DNA phosphodiesterase that repairs topoisomerase I complexes
-
Pouliot, J. J., Yao, K. C., Robertson, C. A., and Nash, H. A. (1999) Yeast gene for a Tyr-DNA phosphodiesterase that repairs topoisomerase I complexes. Science 286, 552-555
-
(1999)
Science
, vol.286
, pp. 552-555
-
-
Pouliot, J.J.1
Yao, K.C.2
Robertson, C.A.3
Nash, H.A.4
-
60
-
-
58149486886
-
Identification of phosphotyrosine mimetic inhibitors of human tyrosyl-DNA phosphodiesterase I by a novel AlphaScreen high-throughput assay
-
Marchand, C., Lea, W. A., Jadhav, A., Dexheimer, T. S., Austin, C. P., Inglese, J., Pommier, Y., and Simeonov, A. (2009) Identification of phosphotyrosine mimetic inhibitors of human tyrosyl-DNA phosphodiesterase I by a novel AlphaScreen high-throughput assay. Mol. Cancer Ther. 8, 240-248
-
(2009)
Mol. Cancer Ther.
, vol.8
, pp. 240-248
-
-
Marchand, C.1
Lea, W.A.2
Jadhav, A.3
Dexheimer, T.S.4
Austin, C.P.5
Inglese, J.6
Pommier, Y.7
Simeonov, A.8
-
61
-
-
0033663604
-
Topoisomerase I-mediated DNA damage
-
Pourquier, P., and Pommier, Y. (2001) Topoisomerase I-mediated DNA damage. Adv. Cancer Res. 80, 189-216
-
(2001)
Adv. Cancer Res.
, vol.80
, pp. 189-216
-
-
Pourquier, P.1
Pommier, Y.2
-
62
-
-
78650964114
-
TDP2/TTRAP is the major 5′-tyrosyl DNA phosphodiesterase activity in vertebrate cells and is critical for cellular resistance to topoisomerase II-induced DNA damage
-
Zeng, Z., Cortés-Ledesma, F., El Khamisy, S. F., and Caldecott, K. W. (2011) TDP2/TTRAP is the major 5′-tyrosyl DNA phosphodiesterase activity in vertebrate cells and is critical for cellular resistance to topoisomerase II-induced DNA damage. J. Biol. Chem. 286, 403-409
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 403-409
-
-
Zeng, Z.1
Cortés-Ledesma, F.2
El Khamisy, S.F.3
Caldecott, K.W.4
-
63
-
-
70349673605
-
A human 5′-tyrosyl DNA phosphodiesterase that repairs topoisomerase-mediated DNA damage
-
Cortes Ledesma, F., El Khamisy, S. F., Zuma, M. C., Osborn, K., and Caldecott, K. W. (2009) A human 5′-tyrosyl DNA phosphodiesterase that repairs topoisomerase-mediated DNA damage. Nature 461, 674-678
-
(2009)
Nature
, vol.461
, pp. 674-678
-
-
Cortes Ledesma, F.1
El Khamisy, S.F.2
Zuma, M.C.3
Osborn, K.4
Caldecott, K.W.5
-
64
-
-
0031003701
-
Effects of uracil incorporation, DNA mismatches, and abasic sites on cleavage and religation activities of mammalian topoisomerase I
-
DOI 10.1074/jbc.272.12.7792
-
Pourquier, P., Ueng, L. M., Kohlhagen, G., Mazumder, A., Gupta, M., Kohn, K. W., and Pommier, Y. (1997) Effects of uracil incorporation, DNA mismatches, and abasic sites on cleavage and religation activities of mammalian topoisomerase I. J. Biol. Chem. 272, 7792-7796 (Pubitemid 27137335)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.12
, pp. 7792-7796
-
-
Pourquier, P.1
Ueng, L.-M.2
Kohlhagen, G.3
Mazumder, A.4
Gupta, M.5
Kohn, K.W.6
Pommier, Y.7
-
65
-
-
0030698003
-
Trapping of mammalian topoisomerase I and recombinations induced by damaged DNA containing nicks or gaps. Importance of DNA end phosphorylation and camptothecin effects
-
DOI 10.1074/jbc.272.42.26441
-
Pourquier, P., Pilon, A. A., Kohlhagen, G., Mazumder, A., Sharma, A., and Pommier, Y. (1997) Trapping of mammalian topoisomerase I and recombinations induced by damaged DNA containing nicks or gaps. Importance of DNA end phosphorylation and camptothecin effects. J. Biol. Chem. 272, 26441-26447 (Pubitemid 27458862)
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.42
, pp. 26441-26447
-
-
Pourquier, P.1
Pilon, A.A.2
Kohlhagen, G.3
Mazumder, A.4
Sharma, A.5
Pommier, Y.6
-
66
-
-
33745278845
-
Repair of Topoisomerase I-Mediated DNA Damage
-
DOI 10.1016/S0079-6603(06)81005-6, PII S0079660306810056, Progress in Nuclei Acid Research and Molecular Biology
-
Pommier, Y., Barcelo, J. M., Rao, V. A., Sordet, O., Jobson, A. G., Thibaut, L., Miao, Z. H., Seiler, J. A., Zhang, H., Marchand, C., Agama, K., Nitiss, J. L., and Redon, C. (2006) Repair of topoisomerase I-mediated DNA damage. Prog. Nucleic Acid Res. Mol. Biol. 81, 179-229 (Pubitemid 44767505)
-
(2006)
Progress in Nucleic Acid Research and Molecular Biology
, vol.81
, pp. 179-229
-
-
Pommier, Y.1
Barcelo, J.M.2
Rao, V.A.3
Sordet, O.4
Jobson, A.G.5
Thibaut, L.6
Miao, Z.7
Seiler, J.A.8
Zhang, H.9
Marchand, C.10
Agama, K.11
Nitiss, J.L.12
Redon, C.13
-
67
-
-
22144434446
-
Multiple endonucleases function to repair covalent topoisomerase I complexes in Saccharomyces cerevisiae
-
DOI 10.1534/genetics.104.028795
-
Deng, C., Brown, J. A., You, D., and Brown, J. M. (2005) Multiple endonucleases function to repair covalent topoisomerase I complexes in Saccharomyces cerevisiae. Genetics 170, 591-600 (Pubitemid 40980662)
-
(2005)
Genetics
, vol.170
, Issue.2
, pp. 591-600
-
-
Deng, C.1
Brown, J.A.2
You, D.3
Brown, J.M.4
|