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Volumn 101, Issue 10, 2011, Pages 1136-1148

Advances in plant virus evolution: Translating evolutionary insights into better disease management

Author keywords

Bottleneck; Epistasis; Fitness; Metagenomics; Mutation rate; Recombination; Robustness; Transcriptome

Indexed keywords

CONFERENCE PAPER; EVOLUTION; GENETIC VARIABILITY; GENETICS; HOST PATHOGEN INTERACTION; MUTATION; PATHOGENICITY; PHYSIOLOGY; PLANT DISEASE; PLANT VIRUS; POPULATION DYNAMICS; VIRUS GENOME;

EID: 80655139823     PISSN: 0031949X     EISSN: None     Source Type: Journal    
DOI: 10.1094/PHYTO-01-11-0017     Document Type: Conference Paper
Times cited : (80)

References (153)
  • 1
    • 78149293252 scopus 로고    scopus 로고
    • Host effect on the genetic diversification of beet necrotic yellow vein virus single-plant populations
    • Acosta-Leal, R., Bryan, K. B., and Rush, C. M. 2010. Host effect on the genetic diversification of Beet necrotic yellow vein virus single-plant populations. Phytopathology 100:1204-1212.
    • (2010) Phytopathology , vol.100 , pp. 1204-1212
    • Acosta-Leal, R.1    Bryan, K.B.2    Rush, C.M.3
  • 2
    • 75949090181 scopus 로고    scopus 로고
    • Breakdown of host resistance by independent evolutionary lineages of beet necrotic yellow vein virus involves a parallel C/U mutation in its p25 gene
    • Acosta-Leal, R., Bryan, K. B., Smith, J. T., and Rush, C. M. 2010. Breakdown of host resistance by independent evolutionary lineages of Beet necrotic yellow vein virus involves a parallel C/U mutation in its p25 gene. Phytopathology 100:127-133.
    • (2010) Phytopathology , vol.100 , pp. 127-133
    • Acosta-Leal, R.1    Bryan, K.B.2    Smith, J.T.3    Rush, C.M.4
  • 3
    • 43749090621 scopus 로고    scopus 로고
    • Changes in the intra-isolate genetic structure of beet necrotic yellow vein virus populations associated with plant resistance breakdown
    • Acosta-Leal, R., Fawley, M. W., and Rush, C. M. 2008. Changes in the intra-isolate genetic structure of Beet necrotic yellow vein virus populations associated with plant resistance breakdown. Virology 376:60-68.
    • (2008) Virology , vol.376 , pp. 60-68
    • Acosta-Leal, R.1    Fawley, M.W.2    Rush, C.M.3
  • 4
    • 50349085805 scopus 로고    scopus 로고
    • Complementary functions of two recessive R-genes determine resistance durability of tobacco 'Virgin A Mutant' (VAM) to Potato virus Y
    • Acosta-Leal, R., and Xiong, Z. 2008. Complementary functions of two recessive R-genes determine resistance durability of tobacco 'Virgin A Mutant' (VAM) to Potato virus Y. Virology 379:275-283.
    • (2008) Virology , vol.379 , pp. 275-283
    • Acosta-Leal, R.1    Xiong, Z.2
  • 8
    • 64849095739 scopus 로고    scopus 로고
    • Deep sequencing analysis of RNAs from a grapevine showing Syrah decline symptoms reveals a multiple virus infection that includes a novel virus
    • Al Rwahnih, M., Daubert, S., Golino, D., and Rowhani, A. 2009. Deep sequencing analysis of RNAs from a grapevine showing Syrah decline symptoms reveals a multiple virus infection that includes a novel virus. Virology 387:395-401.
    • (2009) Virology , vol.387 , pp. 395-401
    • Al Rwahnih, M.1    Daubert, S.2    Golino, D.3    Rowhani, A.4
  • 9
    • 0031872109 scopus 로고    scopus 로고
    • Genomic structure of three phenotypically different isolates of peach latent mosaic viroid: Implications of the existence of constraints limiting the heterogeneity of viroid quasispecies
    • Ambrós, S., Hernández, C., Desvignes, J. C., and Flores, R. 1998. Genomic structure of three phenotypically different isolates of peach latent mosaic viroid: Implication of the existence of constraints limiting the heterogeneity of viroid quasispecies. J. Virol. 72:7397-7406. (Pubitemid 28377871)
    • (1998) Journal of Virology , vol.72 , Issue.9 , pp. 7397-7406
    • Ambros, S.1    Hernandez, C.2    Desvignes, J.C.3    Flores, R.4
  • 10
    • 55549130497 scopus 로고    scopus 로고
    • Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection
    • DOI 10.1104/pp.108.121038
    • Ascencio-Ibáñez, J. T., Sozzani, R., Lee, T. J., Chu, T. M., Wolfinger, R. D., Cella, R., and Hanley-Bowdoin, L. 2008. Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. Plant Physiol. 148:436-454. (Pubitemid 352847618)
    • (2008) Plant Physiology , vol.148 , Issue.1 , pp. 436-454
    • Ascencio-Ibanez, J.T.1    Sozzani, R.2    Lee, T.-J.3    Chu, T.-M.4    Wolfinger, R.D.5    Cella, R.6    Hanley-Bowdoin, L.7
  • 11
    • 0033102482 scopus 로고    scopus 로고
    • The haplotype distribution of two genes of citrus tristeza virus is altered after host change or aphid transmission
    • DOI 10.1006/viro.1998.9566
    • Ayllón, M. A., Rubio, L., Moya, A., Guerri, J., and Moreno, P. 1999. The haplotype distribution of two genes of Citrus tristeza virus is altered after host change or aphid transmission. Virology 255:32-39. (Pubitemid 29391692)
    • (1999) Virology , vol.255 , Issue.1 , pp. 32-39
    • Ayllon, M.A.1    Rubio, L.2    Moya, A.3    Guerri, J.4    Moreno, P.5
  • 12
    • 47749122596 scopus 로고    scopus 로고
    • Altered gene expression changes in Arabidopsis leaf tissues and protoplasts in response to Plum pox virus infection
    • Babu, M., Griffiths, J. S., Huang, T. S., and Wang, A. 2008. Altered gene expression changes in Arabidopsis leaf tissues and protoplasts in response to Plum pox virus infection. BMC Genomics 9:325.
    • (2008) BMC Genomics , vol.9 , pp. 325
    • Babu, M.1    Griffiths, J.S.2    Huang, T.S.3    Wang, A.4
  • 13
    • 68049131345 scopus 로고    scopus 로고
    • Connecting viral with cellular interactomes
    • Bailer, S. M., and Haas, J. 2009. Connecting viral with cellular interactomes. Curr. Opin. Microbiol. 12:453-459.
    • (2009) Curr. Opin. Microbiol. , vol.12 , pp. 453-459
    • Bailer, S.M.1    Haas, J.2
  • 14
    • 0742305866 scopus 로고    scopus 로고
    • Network biology: Understanding the cell's functional organization
    • DOI 10.1038/nrg1272
    • Barábasi, A. L., and Oltvai, Z. N. 2004. Network biology: Understanding the cell's functional organization. Nat. Rev. Genet. 5:101-113. (Pubitemid 38160277)
    • (2004) Nature Reviews Genetics , vol.5 , Issue.2 , pp. 101-113
    • Barabasi, A.-L.1    Oltvai, Z.N.2
  • 15
    • 33750953227 scopus 로고    scopus 로고
    • Whole-genome re-sequencing
    • DOI 10.1016/j.gde.2006.10.009, PII S0959437X06002085, Genomes and Evolution
    • Bentley, D. R. 2006. Whole-genome re-sequencing. Curr. Opin. Gen. Develop. 16:545-552. (Pubitemid 44738530)
    • (2006) Current Opinion in Genetics and Development , vol.16 , Issue.6 , pp. 545-552
    • Bentley, D.R.1
  • 17
    • 33847247125 scopus 로고    scopus 로고
    • Theory of lethal mutagenesis for viruses
    • DOI 10.1128/JVI.01624-06
    • Bull, J. J., Sanjuán, R., and Wilkie, C. O. 2007. Theory of lethal mutagenesis for viruses. J. Virol. 81:2930-2939. (Pubitemid 46447056)
    • (2007) Journal of Virology , vol.81 , Issue.6 , pp. 2930-2939
    • Bull, J.J.1    Sanjuan, R.2    Wilke, C.O.3
  • 18
    • 0034632830 scopus 로고    scopus 로고
    • Evolvability of an RNA virus is determined by its mutational neighbourhood
    • DOI 10.1038/35020564
    • Burch, C. L., and Chao, L. 2000. Evolvability of an RNA virus is determined by its mutational neighbourhood. Nature 406:625-628. (Pubitemid 30641048)
    • (2000) Nature , vol.406 , Issue.6796 , pp. 625-628
    • Burch, C.L.1    Chao, L.2
  • 20
    • 36348963100 scopus 로고    scopus 로고
    • Distribution of fitness and virulence effects caused by single-nucleotide substitutions in Tobacco etch virus
    • DOI 10.1128/JVI.00524-07
    • Carrasco, P., de la Iglesia, F., and Elena, S. F. 2007. Distribution of fitness and virulence effects caused by single-nucleotide substitutions in tobacco etch virus. J. Virol. 81:12979-12984. (Pubitemid 350156936)
    • (2007) Journal of Virology , vol.81 , Issue.23 , pp. 12979-12984
    • Carrasco, P.1    De La Iglesia, F.2    Elena, S.F.3
  • 21
    • 33845700329 scopus 로고    scopus 로고
    • Evaluation of the durability of the Barley yellow dwarf virus-resistant Zhong ZH and TC14 wheat lines
    • DOI 10.1007/s10658-006-9066-8
    • Chain, F., Riault, G., Trottet, M., and Jacquot, E. 2007. Evaluation of the durability of the Barley yellow dwarf virus-resistant Zhong ZH and TC14 wheat lines. Eur. J. Plant Pathol. 117:35-43. (Pubitemid 44963436)
    • (2007) European Journal of Plant Pathology , vol.117 , Issue.1 , pp. 35-43
    • Chain, F.1    Riault, G.2    Trottet, M.3    Jacquot, E.4
  • 22
    • 5444273530 scopus 로고    scopus 로고
    • Selection pressures in the capsid genes of plant RNA viruses reflect mode of transmission
    • DOI 10.1099/vir.0.80134-0
    • Chare, E. R., and Holmes, E. C. 2004. Selection pressures in the capsid genes of plant RNA viruses reflect mode of transmission. J. Gen. Virol. 85:3149-3157. (Pubitemid 39360059)
    • (2004) Journal of General Virology , vol.85 , Issue.10 , pp. 3149-3157
    • Chare, E.R.1    Holmes, E.C.2
  • 23
    • 33645972304 scopus 로고    scopus 로고
    • A phylogenetic survey of recombination frequency in plant RNA viruses
    • Chare, E. R., and Holmes, E. C. 2006. A phylogenetic survey of recombination frequency in plant RNA viruses. Arch. Virol. 151:933-946.
    • (2006) Arch. Virol. , vol.151 , pp. 933-946
    • Chare, E.R.1    Holmes, E.C.2
  • 26
    • 33846018059 scopus 로고    scopus 로고
    • The fittest versus the flattest: Experimental confirmation of the quasispecies effect with subviral pathogens
    • DOI 10.1371/journal.ppat.0020136
    • Codoñer, F. M., Daròs, J.-A., Sole, R. V., and Elena, S. F. 2006. The fittest versus the flattest: Experimental confirmation of the quasispecies effect with subviral pathogens. PLoS Pathog. 2:1187-1193. (Pubitemid 46045205)
    • (2006) PLoS Pathogens , vol.2 , Issue.12 , pp. 1187-1193
    • Codoner, F.M.1    Daros, J.-A.2    Sole, R.V.3    Elena, S.F.4
  • 28
    • 33744819205 scopus 로고    scopus 로고
    • Viroids: An Ariadne's thread into the RNA labyrinth
    • DOI 10.1038/sj.embor.7400706, PII 7400706
    • Daròs, J.-A., Elena, S. F., and Flores, R. 2006. Viroids: And Ariadne's thread into the RNA labyrinth. EMBO Rep. 7:593-598. (Pubitemid 43832523)
    • (2006) EMBO Reports , vol.7 , Issue.6 , pp. 593-598
    • Daros, J.-A.1    Elena, S.F.2    Flores, R.3
  • 30
    • 0036384229 scopus 로고    scopus 로고
    • Chrysanthemum chlorotic mottle viroid RNA: Dissection of the pathogenicity determinant and comparative fitness of symptomatic and non-symptomatic variants
    • De la Peña, M., and Flores, R. 2002. Chrysanthemum chlorotic mottle viroid RNA: Dissection of the pathogenicity determinant and comparative fitness of symptomatic and non-symptomatic variants. J. Mol. Biol. 321:411-421.
    • (2002) J. Mol. Biol. , vol.321 , pp. 411-421
    • De La Peña, M.1    Flores, R.2
  • 32
    • 0015108128 scopus 로고
    • Potato spindle tuber "virus". I V. A replicating, low molecular weight RNA
    • Diener, T. O. 1971. Potato spindle tuber "virus". I V. A replicating, low molecular weight RNA. Virology 45:411-428.
    • (1971) Virology , vol.45 , pp. 411-428
    • Diener, T.O.1
  • 34
    • 0035232430 scopus 로고    scopus 로고
    • The viroid: Biological oddity or evolutionary fossil?
    • PII S0065352701570037
    • Diener, T. O. 2001. The viroid: Biological oddity or evolutionary fossil? Adv. Virus Res. 57:137-184. (Pubitemid 33804575)
    • (2001) Advances in Virus Research , vol.57 , pp. 137-184
    • Diener, T.O.1
  • 35
    • 73649127602 scopus 로고    scopus 로고
    • The fitness effects of random mutations in single-stranded DNA and RNA bacteriophages
    • Domingo-Calap, P., Cuevas, J. M., and Sanjuán, R. 2009. The fitness effects of random mutations in single-stranded DNA and RNA bacteriophages. PLoS Genet. 5:e1000742.
    • (2009) PLoS Genet. , vol.5
    • Domingo-Calap, P.1    Cuevas, J.M.2    Sanjuán, R.3
  • 37
    • 37849014296 scopus 로고    scopus 로고
    • Phylogenetic evidence for rapid rates of molecular evolution in the single-stranded DNA begomovirus Tomato yellow leaf curl virus (TYLCV)
    • Duffy, S., and Holmes, E. C. 2008. Phylogenetic evidence for rapid rates of molecular evolution in the single-stranded DNA begomovirus Tomato yellow leaf curl virus (TYLCV). J. Virol. 82:957-965.
    • (2008) J. Virol. , vol.82 , pp. 957-965
    • Duffy, S.1    Holmes, E.C.2
  • 38
    • 67649224497 scopus 로고    scopus 로고
    • Validation of high rates of nucleotide substitution in geminiviruses: Phylogenetic evidence from East African cassava mosaic viruses
    • Duffy, S., and Holmes, E. C. 2009. Validation of high rates of nucleotide substitution in geminiviruses: Phylogenetic evidence from East African cassava mosaic viruses. J. Gen. Virol. 90:1539-1547.
    • (2009) J. Gen. Virol. , vol.90 , pp. 1539-1547
    • Duffy, S.1    Holmes, E.C.2
  • 39
    • 40849097775 scopus 로고    scopus 로고
    • Rates of evolutionary change in viruses: Patterns and determinants
    • DOI 10.1038/nrg2323, PII NRG2323
    • Duffy, S., Shackelton, L. A., and Holmes, E. C. 2008. Rates of evolutionary change in viruses: Patterns and determinants. Nat. Rev. Genet. 9:267-276. (Pubitemid 351399833)
    • (2008) Nature Reviews Genetics , vol.9 , Issue.4 , pp. 267-276
    • Duffy, S.1    Shackelton, L.A.2    Holmes, E.C.3
  • 40
    • 33644781708 scopus 로고    scopus 로고
    • Pleiotropic costs of niche expansion in the RNA bacteriophage Φ6
    • DOI 10.1534/genetics.105.051136
    • Duffy, S., Turner, P. E., and Burch, C. L. 2006. Pleiotropic costs of niche expansion in the RNA bacteriophage Phi 6. Genetics 172:751-757. (Pubitemid 43345415)
    • (2006) Genetics , vol.172 , Issue.2 , pp. 751-757
    • Duffy, S.1    Turner, P.E.2    Burch, C.L.3
  • 41
    • 62149143760 scopus 로고    scopus 로고
    • Structure and evolution of viroids
    • E. Domingo, C. R. Parrish, and J. J. Holland, eds. Academic Press, London
    • Durán-Vila, N., Elena, S. F., Darós, J. A., and Flores, R. 2008. Structure and evolution of viroids. Pages 43-64 in: Origin and Evolution of Viruses. E. Domingo, C. R. Parrish, and J. J. Holland, eds. Academic Press, London.
    • (2008) Origin and Evolution of Viruses , pp. 43-64
    • Durán-Vila, N.1    Elena, S.F.2    Darós, J.A.3    Flores, R.4
  • 42
    • 40349106161 scopus 로고    scopus 로고
    • The landscape of human proteins interacting with viruses and other pathogens
    • Dyer, M. D., Murali, T. M., and Sobral, B. W. 2008. The landscape of human proteins interacting with viruses and other pathogens. PLoS Pathog. 4:e32.
    • (2008) PLoS Pathog. , vol.4
    • Dyer, M.D.1    Murali, T.M.2    Sobral, B.W.3
  • 44
    • 33645800999 scopus 로고    scopus 로고
    • Mechanisms of genetic robustness in RNA viruses
    • Elena, S. F., Carrasco, P., Darós, J. A., and Sanjuán, R. 2006. Mechanisms of genetic robustness in RNA viruses. EMBO Rep. 7:168-173.
    • (2006) EMBO Rep. , vol.7 , pp. 168-173
    • Elena, S.F.1    Carrasco, P.2    Darós, J.A.3    Sanjuán, R.4
  • 45
    • 79961167536 scopus 로고    scopus 로고
    • A systems biology approach to the evolution of plant-virus interactions
    • doi:10.1016/j.pbi.2011.03.013
    • Elena, S. F., Carrera, J., and Rodrigo, G. 2011. A systems biology approach to the evolution of plant-virus interactions. Curr. Opin. Plant Biol. doi:10.1016/j.pbi.2011.03.013.
    • (2011) Curr. Opin. Plant Biol.
    • Elena, S.F.1    Carrera, J.2    Rodrigo, G.3
  • 46
    • 84872651836 scopus 로고    scopus 로고
    • Evolutionary constraints to viroid evolution
    • Elena, S. F., Gómez, G., and Daròs, J.-A. 2009. Evolutionary constraints to viroid evolution. Viruses 1:241-254.
    • (2009) Viruses , vol.1 , pp. 241-254
    • Elena, S.F.1    Gómez, G.2    Daròs, J.-A.3
  • 47
    • 24644465004 scopus 로고    scopus 로고
    • Adaptive value of high mutation rates of RNA viruses: Separating causes from consequences
    • DOI 10.1128/JVI.79.18.11555-11558.2005
    • Elena, S. F., and Sanjuán, R. 2005. Adaptive value of high mutation rates of RNA viruses: Separating causes from consequences. J. Virol. 79:11555-11558. (Pubitemid 41279273)
    • (2005) Journal of Virology , vol.79 , Issue.18 , pp. 11555-11558
    • Elena, S.F.1    Sanjuan, R.2
  • 48
    • 35848963195 scopus 로고    scopus 로고
    • Senescence-associated genes induced during compatible viral interactions with grapevine and Arabidopsis
    • DOI 10.1093/jxb/erm165
    • Espinoza, C., Medina, C., Somerville, S., and Arce-Jonhson, P. 2007. Senescence-associated genes induced during compatible viral interactions with grapevine and Arabidopsis. J. Exp. Bot. 58:3197-3212. (Pubitemid 350060412)
    • (2007) Journal of Experimental Botany , vol.58 , Issue.12 , pp. 3197-3212
    • Espinoza, C.1    Medina, C.2    Somerville, S.3    Arce-Johnson, P.4
  • 49
    • 63749100580 scopus 로고    scopus 로고
    • Key determinants of resistance durability to plant viruses: Insights from a model linking within-and between-host dynamics
    • Fabre, F., Brouchou, C., Palloix, A., and Moury, B. 2009. Key determinants of resistance durability to plant viruses: Insights from a model linking within-and between-host dynamics. Virus Res. 141:140-149.
    • (2009) Virus Res. , vol.141 , pp. 140-149
    • Fabre, F.1    Brouchou, C.2    Palloix, A.3    Moury, B.4
  • 50
    • 31044432768 scopus 로고    scopus 로고
    • Post-transcriptional gene silencing of the p23 silencing suppressor of Citrus tristeza virus confers resistance to the virus in transgenic Mexican lime
    • DOI 10.1007/s11103-005-3129-7
    • Fagoaga, C., López, C., de Mendoza, A. H., Moreno, P., Navarro, L., Flores, R., and Peña, L. 2006. Post-transcriptional gene silencing of the p23 silencing suppressor of Citrus tristeza virus confers resistance to the virus in transgenic Mexican lime. Plant Mol. Biol. 60:153-165. (Pubitemid 43121773)
    • (2006) Plant Molecular Biology , vol.60 , Issue.2 , pp. 153-165
    • Fagoaga, C.1    Lopez, C.2    De Mendoza, A.H.3    Moreno, P.4    Navarro, L.5    Flores, R.6    Pena, L.7
  • 53
    • 34250749323 scopus 로고    scopus 로고
    • High frequency of mutations that expand the host range of an RNA virus
    • DOI 10.1534/genetics.106.064634
    • Ferris, M. T., Joyce, P., and Burch, C. L. 2007. High frequency of mutations that expand the host range of an RNA virus. Genetics 176:1013-1022. (Pubitemid 46961103)
    • (2007) Genetics , vol.176 , Issue.2 , pp. 1013-1022
    • Ferris, M.T.1    Joyce, P.2    Burch, C.L.3
  • 55
    • 0030248240 scopus 로고    scopus 로고
    • Genetic diversity in tobacco mild green mosaic tobamovirus infecting the wild plant Nicotiana glauca
    • DOI 10.1006/viro.1996.0463
    • Fraile, A., Malpica, J. M., Aranda, M. A., Rodríguez-Cerezo, E., and García-Arenal, F. 1996. Genetic diversity in tobacco mild green mosaic tobamovirus infecting the wild plant Nicotiana glauca. Virology 223:148-155. (Pubitemid 26302054)
    • (1996) Virology , vol.223 , Issue.1 , pp. 148-155
    • Fraile, A.1    Malpica, J.M.2    Aranda, M.A.3    Rodriguez-Cerezo, E.4    Garcia-Arenal, F.5
  • 56
    • 12544256776 scopus 로고    scopus 로고
    • Serial analysis of gene expression (SAGE) of host-plant resistance to the cassava mosaic disease (CMD)
    • Fregene, M., Matsumura, H., Akano, A., Dixon, A., and Terauchi, R. 2004. Serial analysis of gene expression (SAGE) of host-plant resistance to the cassava mosaic disease (CMD). Plant Mol. Biol. 56:563-571.
    • (2004) Plant Mol. Biol. , vol.56 , pp. 563-571
    • Fregene, M.1    Matsumura, H.2    Akano, A.3    Dixon, A.4    Terauchi, R.5
  • 57
    • 0242406908 scopus 로고    scopus 로고
    • Evolution of Wheat Streak Mosaic Virus: Dynamics of Population Growth Within Plants May Explain Limited Variation
    • DOI 10.1146/annurev.phyto.41.052002.095559
    • French, R., and Stenger, D. C. 2003. Evolution of Wheat streak mosaic virus: Dynamics of population growth within plants may explain limited variation. Annu. Rev. Phytopathol. 41:199-214. (Pubitemid 37399680)
    • (2003) Annual Review of Phytopathology , vol.41 , pp. 199-214
    • French, R.1    Stenger, D.C.2
  • 58
    • 27744473493 scopus 로고    scopus 로고
    • Population structure within lineages of Wheat streak mosaic virus derived from a common founding event exhibits stochastic variation inconsistent with the deterministic quasi-species model
    • DOI 10.1016/j.virol.2005.08.037, PII S0042682205005337
    • French, R., and Stenger, D. C. 2005. Population structure within lineages of Wheat streak mosaic virus derived from a common founding event exhibits stochastic variation inconsistent with the deterministic quasispecies model. Virology 343:179-189. (Pubitemid 41598359)
    • (2005) Virology , vol.343 , Issue.2 , pp. 179-189
    • French, R.1    Stenger, D.C.2
  • 59
    • 18044386958 scopus 로고    scopus 로고
    • Recombination every day: Abundant recombination in a virus during a single multi-cellular host infection
    • Froissart, R., Roze, D., Uzest, M., Galibert, L., Blanc, S., and Michalakis, Y. 2005. Recombination every day: Abundant recombination in a virus during a single multi-cellular host infection. PLoS Biol. 3:e89.
    • (2005) PLoS Biol. , vol.3
    • Froissart, R.1    Roze, D.2    Uzest, M.3    Galibert, L.4    Blanc, S.5    Michalakis, Y.6
  • 60
    • 5144231912 scopus 로고    scopus 로고
    • Co-infection weakens selection against epistatic mutations in RNA viruses
    • DOI 10.1534/genetics.104.030205
    • Froissart, R., Wilke, C. O., Montville, R., Remold, S. K., Chao, L., and Turner, P. E. 2004. Co-infection weakens selection against epistatic mutations in RNA viruses. Genetics 168:9-19. (Pubitemid 39346575)
    • (2004) Genetics , vol.168 , Issue.1 , pp. 9-19
    • Froissart, R.1    Wilke, C.O.2    Montville, R.3    Remold, S.K.4    Chao, L.5    Turner, P.E.6
  • 61
    • 62149152282 scopus 로고    scopus 로고
    • Extremely high mutation rate of a hammerhead viroid
    • Gago, S., Elena, S. E., Flores, R., and Sanjuán, R. 2009. Extremely high mutation rate of a hammerhead viroid. Science 323:1308.
    • (2009) Science , vol.323 , pp. 1308
    • Gago, S.1    Elena, S.E.2    Flores, R.3    Sanjuán, R.4
  • 62
    • 0034798786 scopus 로고    scopus 로고
    • Variability and genetic structure of plant virus populations
    • DOI 10.1146/annurev.phyto.39.1.157
    • García-Arenal, F., Fraile, A., and Malpica, J. M. 2001. Variability and genetic structure of plant virus populations. Annu. Rev. Phytopathol. 39:157-186. (Pubitemid 32965183)
    • (2001) Annual Review of Phytopathology , vol.39 , pp. 157-186
    • Garcia-Arenal, F.1    Fraile, A.2    Malpica, J.M.3
  • 63
    • 18144451799 scopus 로고    scopus 로고
    • Variation and evolution of plant virus populations
    • DOI 10.1007/s10123-003-0142-z
    • García-Arenal, F., Fraile, A., and Malpica, J. M. 2003. Variation and evolution of plant virus populations. Int. Microbiol. 6:225-232. (Pubitemid 37524234)
    • (2003) International Microbiology , vol.6 , Issue.4 , pp. 225-232
    • Garcia-Arenal, F.1    Fraile, A.2    Malpica, J.M.3
  • 64
    • 0033136003 scopus 로고    scopus 로고
    • Altered patterns of gene expression in Arabidopsis elicited by cauliflower mosaic virus (CaMV) infection and by a CaMV gene VI transgene
    • Geri, C., Cecchini, E., Giannakou, M. E., Covey, S. N., and Milner, J. J. 1999. Altered patterns of gene expression in Arabidopsis elicited by Cauliflower mosaic virus (CaMV) infection and by CaMV gene VI transgene. Mol. Plant-Microbe Interact. 12:377-384. (Pubitemid 29194707)
    • (1999) Molecular Plant-Microbe Interactions , vol.12 , Issue.5 , pp. 377-384
    • Geri, C.1    Cecchini, E.2    Giannakou, M.E.3    Covey, S.N.4    Milner, J.J.5
  • 66
    • 49749142785 scopus 로고    scopus 로고
    • More about plant virus evolution: Past, present and future
    • E. Domingo, C. R. Parrish, and J. J. Holland, eds. Academic Press, London
    • Gibbs, A. J., Gibbs, M., Ohshima, K., and García-Arenal, F. 2008. More about plant virus evolution: Past, present and future. Pages 229-250 in: Origin and Evolution of Viruses. E. Domingo, C. R. Parrish, and J. J. Holland, eds. Academic Press, London.
    • (2008) Origin and Evolution of Viruses , pp. 229-250
    • Gibbs, A.J.1    Gibbs, M.2    Ohshima, K.3    García-Arenal, F.4
  • 67
    • 47549085229 scopus 로고    scopus 로고
    • The prehistory of potyviruses: Their initial radiation was during the dawn of agriculture
    • Gibbs, A. J., Ohshima, K., Phillips, M. J., and Gibbs, M. J. 2008. The prehistory of potyviruses: Their initial radiation was during the dawn of agriculture. PLoS ONE 3:e2523.
    • (2008) PLoS ONE , vol.3
    • Gibbs, A.J.1    Ohshima, K.2    Phillips, M.J.3    Gibbs, M.J.4
  • 68
    • 0041766197 scopus 로고    scopus 로고
    • Tobacco mosaic virus induced alterations in the gene expression profile of Arabidopsis thaliana
    • Golem, S., and Culver, J. N. 2003. Tobacco mosaic virus induced alterations in the gene expression profile of Arabidopsis thaliana. Mol. Plant-Microbe Interact. 16:681-688. (Pubitemid 36914670)
    • (2003) Molecular Plant-Microbe Interactions , vol.16 , Issue.8 , pp. 681-688
    • Golem, S.1    Culver, J.N.2
  • 69
    • 67650885886 scopus 로고    scopus 로고
    • The multiplicity of infection of a plant virus varies during colonization of its eukaryotic host
    • González-Jara, P., Fraile, A., Canto, T., and García- Arenal, F. 2009. The Multiplicity of infection of a plant virus varies during colonization of its eukaryotic host. J. Virol. 83:7487-7494.
    • (2009) J. Virol. , vol.83 , pp. 7487-7494
    • González-Jara, P.1    Fraile, A.2    Canto, T.3    García-Arenal, F.4
  • 71
    • 0035057558 scopus 로고    scopus 로고
    • Towards a protein interaction map of potyviruses: Protein interaction matrixes of two potyviruses based on the yeast two-hybrid system
    • Guo, D., Rajamäki, M. L., Saarma, M., and Valkonen, J. P. T. 2001. Towards a protein interaction map of potyviruses: Protein interaction matrixes of two potyviruses based on the yeast two-hybrid system. J. Gen. Virol. 82:935-939. (Pubitemid 32280053)
    • (2001) Journal of General Virology , vol.82 , Issue.4 , pp. 935-939
    • Guo, D.1    Rajamaki, M.-L.2    Saarma, M.3    Valkonen, J.P.T.4
  • 73
    • 77953752510 scopus 로고    scopus 로고
    • Diverse functions for DNA and RNA editing in the immune system
    • Hamilton, C. E., Papavasiliou, F. N., and Rosenberg, B. R. 2010. Diverse functions for DNA and RNA editing in the immune system. RNA Biol. 7:220-228.
    • (2010) RNA Biol. , vol.7 , pp. 220-228
    • Hamilton, C.E.1    Papavasiliou, F.N.2    Rosenberg, B.R.3
  • 74
    • 0024828178 scopus 로고
    • Nucleotide sequence and proposed secondary structure of Columnea latent viroid: A natural mosaic of viroid sequences
    • Hammond, R., Smith, D. R., and Diener, T. O. 1989. Nucleotide sequence and proposed secondary structure of Columnea latent viroid: A natural mosaic of viroid sequences. Nucleic Acids Res. 17:10083-10094. (Pubitemid 20010802)
    • (1989) Nucleic Acids Research , vol.17 , Issue.23 , pp. 10083-10094
    • Hammond, R.1    Smith, D.R.2    Diener, T.O.3
  • 76
    • 77951692453 scopus 로고    scopus 로고
    • The evolutionary genetics of emerging viruses
    • Holmes, E. C. 2009. The evolutionary genetics of emerging viruses. Annu. Rev. Ecol. Evol. Syst. 40:353-372.
    • (2009) Annu. Rev. Ecol. Evol. Syst. , vol.40 , pp. 353-372
    • Holmes, E.C.1
  • 77
    • 2342464855 scopus 로고    scopus 로고
    • Comparative analysis of expressed sequence tags in resistant and susceptible ecotypes of Arabidopsis thaliana infected with cucumber mosaic virus
    • DOI 10.1093/pcp/pch057
    • Ishihara, T., Sakurai, N., Sekine, K. T., Hase, S., Ikegami, M., Shibata, D., and Takahashi, H. 2004. Comparative analysis of expressed sequence tags in resistant and susceptible ecotypes of Arabidopsis thaliana infected with Cucumber mosaic virus. Plant Cell Physiol. 45:470-480. (Pubitemid 38592374)
    • (2004) Plant and Cell Physiology , vol.45 , Issue.4 , pp. 470-480
    • Ishihara, T.1    Sakurai, N.2    Sekine, K.-T.3    Hase, S.4    Ikegami, M.5    Shibata, D.6    Takahashi, H.7
  • 78
    • 33947528606 scopus 로고    scopus 로고
    • Low genetic diversity among cucumber vein yellowing virus isolates from Spain
    • Janssen, D., Velasco, L., Martin, G., Segundo, E., and Cuadrado, I. 2006. Low genetic diversity among Cucumber vein yellowing virus isolates from Spain. Virus Genes 34:367-371.
    • (2006) Virus Genes , vol.34 , pp. 367-371
    • Janssen, D.1    Velasco, L.2    Martin, G.3    Segundo, E.4    Cuadrado, I.5
  • 79
    • 0036147047 scopus 로고    scopus 로고
    • Rates of molecular evolution in RNA viruses: A quantitative phylogenetic analysis
    • DOI 10.1007/s00239-001-0064-3
    • Jenkins, G. M., Rambaut, A., Pybus, O. G., and Holmes, E. C. 2002. Rates of molecular evolution in RNA viruses: A quantitative phylogenetic analysis. J. Mol. Evol. 54:156-165. (Pubitemid 34076343)
    • (2002) Journal of Molecular Evolution , vol.54 , Issue.2 , pp. 156-165
    • Jenkins, G.M.1    Rambaut, A.2    Pybus, O.G.3    Holmes, E.C.4
  • 80
    • 0034979415 scopus 로고    scopus 로고
    • Mutants of Tobacco mosaic virus with temperature-sensitive coat proteins induce heat shock response in tobacco leaves
    • Jockusch, H., Wiegand, C., Mersch, B., and Rajes, D. 2001. Mutants of Tobacco mosaic virus with temperature-sensitive coat proteins induce heat shock response in tobacco leaves. Mol. Plant-Microbe Interact. 14:914-917. (Pubitemid 32575670)
    • (2001) Molecular Plant-Microbe Interactions , vol.14 , Issue.7 , pp. 914-917
    • Jockusch, H.1    Wiegand, C.2    Mersch, B.3    Rajes, D.4
  • 81
    • 33144462048 scopus 로고    scopus 로고
    • Distinct viral populations differentiate and evolve independently in a single perennial host plant
    • DOI 10.1128/JVI.80.5.2349-2357.2006
    • Jridi, C., Martin, J. F., Marie-Jeanne, V., Labonne, G., and Blanc, S. 2006. Distinct viral populations differentiate and evolve independently in a single perennial host plant. J. Virol. 80:2349-2357. (Pubitemid 43271540)
    • (2006) Journal of Virology , vol.80 , Issue.5 , pp. 2349-2357
    • Jridi, C.1    Martin, J.-F.2    Marie-Jeanne, V.3    Labonne, G.4    Blanc, S.5
  • 83
    • 33645470624 scopus 로고    scopus 로고
    • SSCP analysis of variations in haplotypes of Citrus tristeza virus isolated from yuzu (Citrus junos) in geographically separate regions of Korea
    • Kim, D. H., Shim, H. K., Hyeon, J. W., Kwon, H. M., Kim, K. S., Choi, M. S., Lee, J. K., Kim, D. G., Yang, J. S., and Lee, S. C. 2006. SSCP analysis of variations in haplotypes of Citrus tristeza virus isolated from yuzu (Citrus junos) in geographically separate regions of Korea. J. Plant Biol. 49:88-96.
    • (2006) J. Plant Biol. , vol.49 , pp. 88-96
    • Kim, D.H.1    Shim, H.K.2    Hyeon, J.W.3    Kwon, H.M.4    Kim, K.S.5    Choi, M.S.6    Lee, J.K.7    Kim, D.G.8    Yang, J.S.9    Lee, S.C.10
  • 84
    • 0036500993 scopus 로고    scopus 로고
    • Systems biology: A brief overview
    • DOI 10.1126/science.1069492
    • Kitano, H. 2002. Systems biology: A brief overview. Science 295:1662-1664. (Pubitemid 34202893)
    • (2002) Science , vol.295 , Issue.5560 , pp. 1662-1664
    • Kitano, H.1
  • 85
    • 0033852648 scopus 로고    scopus 로고
    • Molecular analyses of European A, B and P type sources of Beet necrotic yellow vein virus and detection of the rare P type in Kazakhstan
    • Koenig, R., and Lennefors, B. L. 2000. Molecular analyses of European A, B and P type sources of Beet necrotic yellow vein virus and detection of the rare P type in Kazakhstan. Arch. Virol. 145:1561-1570.
    • (2000) Arch. Virol. , vol.145 , pp. 1561-1570
    • Koenig, R.1    Lennefors, B.L.2
  • 87
    • 37349086780 scopus 로고    scopus 로고
    • Avoidance of protein fold disruption in natural virus recombinants
    • Lefeuvre, P., Lett, J. M., Reynaud, B., and Martin, D. P. 2007. Avoidance of protein fold disruption in natural virus recombinants. PLoS Pathog. 3:e181.
    • (2007) PLoS Pathog. , vol.3
    • Lefeuvre, P.1    Lett, J.M.2    Reynaud, B.3    Martin, D.P.4
  • 88
    • 4544331687 scopus 로고    scopus 로고
    • Genetic bottlenecks reduce population variation in an experimental RNA virus population
    • DOI 10.1128/JVI.78.19.10582-10587.2004
    • Li, H. Y., and Roossinck, M. J. 2004. Genetic bottlenecks reduce population variation in an experimental RNA virus population. J. Virol. 78:10582-10587. (Pubitemid 39258384)
    • (2004) Journal of Virology , vol.78 , Issue.19 , pp. 10582-10587
    • Li, H.1    Roossinck, M.J.2
  • 89
  • 90
    • 1942472467 scopus 로고    scopus 로고
    • Effect of the host and temperature on the formation of defective RNAs associated with Broad bean mottle virus infection
    • Llamas, S., Sandoval, C., Babin, M., Pogany, J., Bujarski, J. J., and Romero, J. 2004. Effect of the host and temperature on the formation of defective RNAs associated with Broad bean mottle virus Infection. Phytopathology 94:69-75. (Pubitemid 38503978)
    • (2004) Phytopathology , vol.94 , Issue.1 , pp. 69-75
    • Llamas, S.1    Sandoval, C.2    Babin, M.3    Pogany, J.4    Bujarski, J.J.5    Romero, J.6
  • 92
    • 77949723176 scopus 로고    scopus 로고
    • Association of Grapevine fanleaf virus, Tomato ringspot virus and Grapevine rupestris stem pitting-associated virus with a grapevine vein-clearing complex on var
    • Lunden, S., Meng, B. Z., Avery, J., and Qiu, W. P. 2010. Association of Grapevine fanleaf virus, Tomato ringspot virus and Grapevine rupestris stem pitting-associated virus with a grapevine vein-clearing complex on var. Chardonnay. Eur. J. Plant Pathol. 126:135-144.
    • (2010) Chardonnay. Eur. J. Plant Pathol. , vol.126 , pp. 135-144
    • Lunden, S.1    Meng, B.Z.2    Avery, J.3    Qiu, W.P.4
  • 93
    • 78049296111 scopus 로고    scopus 로고
    • Patterns of HIV-1 protein interaction identify perturbed hostcellular subsystems
    • MacPherson, J. I., Dikerson, J. E., Pinney, J. W., and Robertson, D. L. 2010. Patterns of HIV-1 protein interaction identify perturbed hostcellular subsystems. PLoS Comp. Biol. 6:e1000863.
    • (2010) PLoS Comp. Biol. , vol.6
    • MacPherson, J.I.1    Dikerson, J.E.2    Pinney, J.W.3    Robertson, D.L.4
  • 94
    • 0036961512 scopus 로고    scopus 로고
    • The rate and character of spontaneous mutation in an RNA virus
    • Malpica, J. Fraile, A., Moreno, I., Obies, C. I., Drake, J. W., and García-Arenal, F. 2002. The rate and character of spontaneous mutation in an RNA virus. Genetics 162:1505-1511. (Pubitemid 36114641)
    • (2002) Genetics , vol.162 , Issue.4 , pp. 1505-1511
    • Malpica, J.M.1    Fraile, A.2    Moreno, I.3    Obies, C.I.4    Drake, J.W.5    Garcia-Arenal, F.6
  • 95
    • 0034310726 scopus 로고    scopus 로고
    • Virus mutators and antimutators: Roles in evolution, pathogenesis, and emergence
    • Mansky, L. M., and Cunninham, K. S. 2000. Virus mutators and antimutators: Roles in evolution, pathogenesis, and emergence. Trends Genet. 16:512-517.
    • (2000) Trends Genet. , vol.16 , pp. 512-517
    • Mansky, L.M.1    Cunninham, K.S.2
  • 96
    • 16644394132 scopus 로고    scopus 로고
    • Study of Arabidopsis thaliana resistome in response to cucumber mosaic virus infection using whole genome microarray
    • DOI 10.1007/s11103-004-0439-0
    • Marathe, R., Guan, Z., Anandalakshmi, R., Zhao, H., and Dinesh-Kumar, S. P. 2004. Study of Arabidopsis thaliana resistome in response to Cucumber mosaic virus infection using whole genome microarray. Plant Mol. Biol. 55:501-520. (Pubitemid 40653980)
    • (2004) Plant Molecular Biology , vol.55 , Issue.4 , pp. 501-520
    • Marathe, R.1    Guan, Z.2    Anandalakshmi, R.3    Zhao, H.4    Dinesh-Kumar, S.P.5
  • 99
    • 50049135016 scopus 로고    scopus 로고
    • Robustness promotes evolvability of thermotolerance in an RNA virus
    • McBride, R. C., Ogbunugafor, C. B., and Turner, P. E. 2008. Robustness promotes evolvability of thermotolerance in an RNA virus. BMC Evol. Biol. 8:231.
    • (2008) BMC Evol. Biol. , vol.8 , pp. 231
    • McBride, R.C.1    Ogbunugafor, C.B.2    Turner, P.E.3
  • 101
    • 75449117466 scopus 로고    scopus 로고
    • Estimation of the size of genetic bottlenecks in cell-to-cell movement of soil-borne wheat mosaic virus and the possible role of the bottlenecks in speeding up selection of variations in trans-acting genes or elements
    • Miyashita, S., and Kishino, H. 2010. Estimation of the size of genetic bottlenecks in cell-to-cell movement of Soil-borne wheat mosaic virus and the possible role of the bottlenecks in speeding up selection of variations in trans-acting genes or elements. J. Virol. 84:1828-1837.
    • (2010) J. Virol. , vol.84 , pp. 1828-1837
    • Miyashita, S.1    Kishino, H.2
  • 102
    • 4544232725 scopus 로고    scopus 로고
    • Tête à tête of tomato yellow leaf curl virus and tomato yellow leaf curl sardinia virus in single nuclei
    • DOI 10.1128/JVI.78.19.10715-10723.2004
    • Morilla, G., Krenz, B., Jeske, H., Bejarano, E. R., and Wege, C. 2004. Tête à tête of Tomato yellow leaf curl virus and Tomato yellow leaf curl Sardinia virus in single nuclei. J. Virol. 78:10715-10723. (Pubitemid 39258397)
    • (2004) Journal of Virology , vol.78 , Issue.19 , pp. 10715-10723
    • Morilla, G.1    Krenz, B.2    Jeske, H.3    Bejarano, E.R.4    Wege, C.5
  • 103
    • 0027418592 scopus 로고
    • Genetic structure of natural populations of the plant RNA virus tobacco mild green mosaic virus
    • Moya, A., Rodríguez-Cerezo, E., and García-Arenal, F. 1993. Geneticstructure of natural-populations of the plant RNA virus Tobacco mild green mosaic virus. Mol. Biol. Evol. 10:449-456. (Pubitemid 23103015)
    • (1993) Molecular Biology and Evolution , vol.10 , Issue.2 , pp. 449-456
    • Moya, A.1    Rodriguez-Cerezo, E.2    Garcia-Arenal, F.3
  • 104
    • 76849087848 scopus 로고    scopus 로고
    • Evolutionary trajectory of Turnip mosaic virus populations adapting to a new host
    • Ohshima, K., Akaishi, S., Kajiyama, H., Koga, R., and Gibbs, A. J. 2010. Evolutionary trajectory of Turnip mosaic virus populations adapting to a new host. J. Gen. Virol. 91:788-801.
    • (2010) J. Gen. Virol. , vol.91 , pp. 788-801
    • Ohshima, K.1    Akaishi, S.2    Kajiyama, H.3    Koga, R.4    Gibbs, A.J.5
  • 105
    • 0032941672 scopus 로고    scopus 로고
    • Genetic variation of geminiviruses: Comparison between sexual and asexual host plant populations
    • DOI 10.1046/j.1365-294X.1999.00537.x
    • Ooi, K., and Yahara, T. 1999. Genetic variation of geminiviruses: Comparison between sexual and asexual host plant populations. Mol. Ecol. 8:89-97. (Pubitemid 29032678)
    • (1999) Molecular Ecology , vol.8 , Issue.1 , pp. 89-97
    • Ooi, K.1    Yahara, T.2
  • 106
    • 0033910733 scopus 로고    scopus 로고
    • Both point mutation and RNA recombination contribute to the sequence diversity of citrus viroid III
    • DOI 10.1023/A:1008144712837
    • Owens, R. A., Yang, G., Gundersen-Rindal, D., Hammond, R. W., Candresse, T., and Bar-Joseph, M. 2000. Both point mutation and recombination contribute to the sequence diversity of Citrus viroid III. Virus Genes 20:243-252. (Pubitemid 30479543)
    • (2000) Virus Genes , vol.20 , Issue.3 , pp. 243-252
    • Owens, R.A.1    Yang, G.2    Gundersen-Rindal, D.3    Hammond, R.W.4    Candresse, T.5    Bar-Joseph, M.6
  • 107
    • 0033590220 scopus 로고    scopus 로고
    • Possible emergence of new geminiviruses by frequent recombination
    • DOI 10.1006/viro.1999.0056
    • Padidam, M., Sawyer, S., and Fauquet, C. M. 1999. Possible emergence of new geminiviruses by frequent recombination. Virology 265:218-225. (Pubitemid 30022217)
    • (1999) Virology , vol.265 , Issue.2 , pp. 218-225
    • Padidam, M.1    Sawyer, S.2    Fauquet, C.M.3
  • 108
    • 77957584093 scopus 로고    scopus 로고
    • Phylogenetic analysis reveals rapid evolutionary dynamics in the plant RNA virus genus tobamovirus
    • Pagán, I., Firth, C., and Holmes, E. C. 2010. Phylogenetic analysis reveals rapid evolutionary dynamics in the plant RNA virus genus tobamovirus. J. Mol. Evol. 71:298-307.
    • (2010) J. Mol. Evol. , vol.71 , pp. 298-307
    • Pagán, I.1    Firth, C.2    Holmes, E.C.3
  • 111
    • 30344469036 scopus 로고    scopus 로고
    • Defective interfering DNAs of plant viruses
    • DOI 10.1080/07352680500391295, PII X78837404U7545Q0
    • Patil, B. L., and Dasgupta, I. 2006. Defective interfering DNAs of plant viruses. Crit. Rev. Plant Sci. 25:47-64. (Pubitemid 43068154)
    • (2006) Critical Reviews in Plant Sciences , vol.25 , Issue.1 , pp. 47-64
    • Patil, B.L.1    Dasgupta, I.2
  • 112
    • 77950024445 scopus 로고    scopus 로고
    • The effect of additional viral infections on garlic plants initially infected with allexiviruses
    • Perotto, M. C., Cafrune, E. E., and Conci, V. C. 2010. The effect of additional viral infections on garlic plants initially infected with Allexiviruses. Eur. J. Plant Pathol. 126:489-495.
    • (2010) Eur. J. Plant Pathol. , vol.126 , pp. 489-495
    • Perotto, M.C.1    Cafrune, E.E.2    Conci, V.C.3
  • 113
    • 0035115583 scopus 로고    scopus 로고
    • Recombination, pseudorecombination and synergism of geminiviruses are determinant keys to the epidemic of severe cassava mosaic disease in Uganda
    • Pita, J. S., Fondong, V. N., Sangare, A., Otim-Nape, G. W., Ogwal, S., and Fauquet, C. M. 2001. Recombination, pseudorecombination and synergism of geminiviruses are determinant keys to the epidemic of severe cassava mosaic disease in Uganda. J. Gen. Virol. 82:655-665. (Pubitemid 32177910)
    • (2001) Journal of General Virology , vol.82 , Issue.3 , pp. 655-665
    • Pita, J.S.1    Fondong, V.N.2    Sangare, A.3    Otim-Nape, G.W.4    Ogwal, S.5    Fauquet, C.M.6
  • 114
    • 73649127980 scopus 로고    scopus 로고
    • Why rice yellow mottle virus, a rapidly evolving RNA plant virus, is not efficient at breaking rymv1-2 resistance
    • Poulicard, N., Pinel-Galzi, A., Hebrard, E., and Fargette, D. 2009. Why Rice yellow mottle virus, a rapidly evolving RNA plant virus, is not efficient at breaking rymv1-2 resistance. Mol. Plant Pathol. 11:145-154.
    • (2009) Mol. Plant Pathol. , vol.11 , pp. 145-154
    • Poulicard, N.1    Pinel-Galzi, A.2    Hebrard, E.3    Fargette, D.4
  • 115
    • 0026070158 scopus 로고
    • High genetic stability in natural populations of the plant RNA virus Tobacco mild Green mosaic virus
    • Rodríguez-Cerezo, E., Elena, S. F., Moya, A., and García-Arenal, F. 1991. High genetic stability in natural populations of the plant RNA virus Tobacco mild Green mosaic virus. J. Mol. Evol. 32:328-332.
    • (1991) J. Mol. Evol. , vol.32 , pp. 328-332
    • Rodríguez-Cerezo, E.1    Elena, S.F.2    Moya, A.3    García-Arenal, F.4
  • 116
    • 0024689017 scopus 로고
    • Genetic heterogeneity of the RNA genome population of the plant virus U5-TMV
    • Rodríguez-Cerezo, E., and García-Arenal, F. 1989. Genetic heterogeneity of the RNA genome population of the plant virus U5-TMV. Virology 170:418-423.
    • (1989) Virology , vol.170 , pp. 418-423
    • Rodríguez-Cerezo, E.1    García-Arenal, F.2
  • 117
    • 84900192993 scopus 로고    scopus 로고
    • Emerging plant viruses: A diversity of mechanisms and opportunities
    • M. J. Roossinck, ed. Springer-Verlag, Berlin
    • Rojas, M. R. and Gilbertson, R. L. 2008. Emerging plant viruses: A diversity of mechanisms and opportunities. Pages 27-51 in: Plant Virus Evolution. M. J. Roossinck, ed. Springer-Verlag, Berlin.
    • (2008) Plant Virus Evolution. , pp. 27-51
    • Rojas, M.R.1    Gilbertson, R.L.2
  • 118
    • 0035102156 scopus 로고    scopus 로고
    • Transition between stochastic evolution and deterministic evolution in the presence of selection: General theory and application to virology
    • DOI 10.1128/MMBR.65.1.151-185.2001
    • Rouzine, I. M., Rodrigo, A., and Coffin, J. M. 2001. Transition between stochastic evolution and deterministic evolution in the presence of selection: General theory and application to virology. Microbiol. Mol. Biol. Rev. 65:151-185. (Pubitemid 32204292)
    • (2001) Microbiology and Molecular Biology Reviews , vol.65 , Issue.1 , pp. 151-185
    • Rouzine, I.M.1    Rodrigo, A.2    Coffin, J.M.3
  • 119
    • 0034864956 scopus 로고    scopus 로고
    • Genetic variation of Citrus Tristeza Virus isolates from California and Spain: Evidence for mixed infections and recombination
    • DOI 10.1128/JVI.75.17.8054-8062.2001
    • Rubio, L., Ayllón, M. A., Kong, P., Fernandez, A., Polek, M., Guerri, J., Moreno, P., and Falk, B. W. 2001. Genetic variation of Citrus tristeza virus isolates from California and Spain: Evidence for mixed infections and recombination. J. Virol. 75:8054-8062. (Pubitemid 32743677)
    • (2001) Journal of Virology , vol.75 , Issue.17 , pp. 8054-8062
    • Rubio, L.1    Ayllon, M.A.2    Kong, P.3    Fernandez, A.4    Polek, M.5    Guerri, J.6    Moreno, P.7    Falk, B.W.8
  • 120
    • 67649112351 scopus 로고    scopus 로고
    • Upper-limit mutation rate estimation for a plant RNA virus
    • Sanjuán, R., Agudelo-Romero, P., and Elena, S. F. 2009. Upper-limit mutation rate estimation for a plant RNA virus. Biol. Lett. 5:394-396.
    • (2009) Biol. Lett. , vol.5 , pp. 394-396
    • Sanjuán, R.1    Agudelo-Romero, P.2    Elena, S.F.3
  • 121
    • 23344432889 scopus 로고    scopus 로고
    • Epistasis and the adaptability of an RNA virus
    • DOI 10.1534/genetics.105.040741
    • Sanjuán, R., Cuevas, J. M., Moya, A., and Elena, S. F. 2005. Epistasis and the adaptability of an RNA virus. Genetics 170:1001-1008. (Pubitemid 41105459)
    • (2005) Genetics , vol.170 , Issue.3 , pp. 1001-1008
    • Sanjuan, R.1    Cuevas, J.M.2    Moya, A.3    Elena, S.F.4
  • 124
    • 0034990080 scopus 로고    scopus 로고
    • Genetic diversity in RNA virus quasispecies is controlled by host-virus interactions
    • DOI 10.1128/JVI.75.14.6566-6571.2001
    • Schneider, W. L., and Roossinck, M. J. 2001. Genetic diversity in RNA virus quasispecies is controlled by host-virus interactions. J. Virol. 75:6566-6571. (Pubitemid 32578176)
    • (2001) Journal of Virology , vol.75 , Issue.14 , pp. 6566-6571
    • Schneider, W.L.1    Roossinck, M.J.2
  • 125
    • 0032889022 scopus 로고    scopus 로고
    • Spontaneous mutation rate of measles virus: Direct estimation based on mutations conferring monoclonal antibody resistance
    • Schrag, S. J., Rota, P. A., and Bellini, W. J. 1999. Spontaneous mutation rate of measles virus: Direct estimation based on mutations conferring monoclonal antibody resistance. J. Virol. 73:51-54. (Pubitemid 28565345)
    • (1999) Journal of Virology , vol.73 , Issue.1 , pp. 51-54
    • Schrag, S.J.1    Rota, P.A.2    Bellini, W.J.3
  • 126
    • 30344462984 scopus 로고    scopus 로고
    • Factors influencing begomovirus evolution and their increasing global significance: Implications for sustainable control
    • DOI 10.1080/07352680500365257, PII M4425PX83172N43W
    • Seal, S. E., VandenBosch, F., and Jeger, M. J. 2006. Factors influencing begomovirus evolution and their increasing global significance: Implications for sustainable control. Crit. Rev. Plant Sci. 25:23-46. (Pubitemid 43068153)
    • (2006) Critical Reviews in Plant Sciences , vol.25 , Issue.1 , pp. 23-46
    • Seal, S.E.1    VandenBosch, F.2    Jeger, M.J.3
  • 127
    • 45549097010 scopus 로고    scopus 로고
    • Rapid evolutionary dynamics of Zucchini yellow mosaic virus
    • Simmons, H. E., Holmes, E. C., and Stephenson, A. G. 2008. Rapid evolutionary dynamics of Zucchini yellow mosaic virus. J. Gen. Virol. 89:1081-1085.
    • (2008) J. Gen. Virol. , vol.89 , pp. 1081-1085
    • Simmons, H.E.1    Holmes, E.C.2    Stephenson, A.G.3
  • 128
    • 4744355827 scopus 로고    scopus 로고
    • Plant virus satellite and defective interfering RNAs: New paradigms for a new century
    • DOI 10.1146/annurev.phyto.42.040803.140402
    • Simon, A. E., Roossinck, M. J., and Havelda, Z. 2004. Plant virus satellite and defective interfering RNAs: New paradigms for a new century. Annu. Rev. Phytopathol. 42:415-437. (Pubitemid 39308519)
    • (2004) Annual Review of Phytopathology , vol.42 , pp. 415-437
    • Simon, A.E.1    Roossinck, M.J.2    Havelda, Z.3
  • 129
    • 0034542564 scopus 로고    scopus 로고
    • The evolution of mutation rates: Separating causes from consequences
    • DOI 10.1002/1521-1878(200 012)22:12<1057::A ID-BIES3>3.0.CO;2-W
    • Sniegowski, P. D., Gerrish, P. J., Johnson, T., and Shaver, A. 2000. The evolution of mutation rates: Separating causes from consequences. BioEssays 22:1057-1066. (Pubitemid 32010515)
    • (2000) BioEssays , vol.22 , Issue.12 , pp. 1057-1066
    • Sniegowski, P.D.1    Gerrish, P.J.2    Johnson, T.3    Shaver, A.4
  • 130
    • 0036432967 scopus 로고    scopus 로고
    • Patterns of polymorphism in Wheat streak mosaic virus: Sequence space explored by a Clade of closely related viral genotypes rivals that between the most divergent strains
    • DOI 10.1006/viro.2001.1569
    • Stenger, D. C., Seifers, D. L., and French, R. 2002. Patterns of polymorphism in Wheat streak mosaic virus: Sequence space explored by a clade of closely related viral genotypes rivals that between the most divergent strains. Virology 302:58-70. (Pubitemid 35356855)
    • (2002) Virology , vol.302 , Issue.1 , pp. 58-70
    • Stenger, D.C.1    Seifers, D.L.2    French, R.3
  • 132
    • 36849029833 scopus 로고    scopus 로고
    • Systems biology and the host response to viral infection
    • DOI 10.1038/nbt1207-1383, PII NBT12071383
    • Tan, S. L., Ganji, G., Paeper, B., Proll, S., and Katze, M. G. 2007. Systems biology and the host response to viral infection. Nat. Biotech. 25:1383-1389. (Pubitemid 350233127)
    • (2007) Nature Biotechnology , vol.25 , Issue.12 , pp. 1383-1389
    • Tan, S.-L.1    Ganji, G.2    Paeper, B.3    Proll, S.4    Katze, M.G.5
  • 133
    • 9644259085 scopus 로고    scopus 로고
    • Comparisons of the genetic structure of populations of Turnip mosaic virus in West and East Eurasia
    • DOI 10.1016/j.virol.2004.09.040, PII S004268220400652X
    • Tomimura, K., Spak, J., Katis, N., Jenner, C. E., Walsh, J. A., Gibbs, A. J., and Ohshima, K. 2004. Comparisons of the genetic structure of populations of Turnip mosaic virus in West and East Eurasia. Virology 330:408-423. (Pubitemid 39572847)
    • (2004) Virology , vol.330 , Issue.2 , pp. 408-423
    • Tomimura, K.1    Spak, J.2    Katis, N.3    Jenner, C.E.4    Walsh, J.A.5    Gibbs, A.J.6    Ohshima, K.7
  • 134
    • 13444293241 scopus 로고    scopus 로고
    • Suppression of RNA silencing by a geminivirus nuclear protein, AC2, correlates with transactivation of host genest
    • DOI 10.1128/JVI.79.4.2517-2527.2005
    • Trinks, D., Rajeswaran, R., Shivaprasad, P. V., Akbergenov, R., Oakeley, E. J., Veluthambi, K., Hohn, T., and Pooggin, M. M. 2005. Suppression of RNA silencing by a geminivirus nuclear protein, AC2, correlates with transactivation of host genes. J. Virol. 79:2517-2527. (Pubitemid 40204606)
    • (2005) Journal of Virology , vol.79 , Issue.4 , pp. 2517-2527
    • Trinks, D.1    Rajeswaran, R.2    Shivaprasad, P.V.3    Akbergenov, R.4    Oakeley, E.J.5    Veluthambi, K.6    Hohn, T.7    Pooggin, M.M.8
  • 135
    • 77956850103 scopus 로고    scopus 로고
    • The rate and spectrum of spontaneous mutations in a plant RNA virus
    • Tromas, N., and Elena, S. F. 2010. The rate and spectrum of spontaneous mutations in a plant RNA virus. Genetics 185:983-989.
    • (2010) Genetics , vol.185 , pp. 983-989
    • Tromas, N.1    Elena, S.F.2
  • 136
    • 0033119814 scopus 로고    scopus 로고
    • Prisoner's dilemma in an RNA virus
    • DOI 10.1038/18913
    • Turner, P. E., and Chao, L. 1999. Prisoner's dilemma in an RNA virus. Nature 398:441-443. (Pubitemid 29180378)
    • (1999) Nature , vol.398 , Issue.6726 , pp. 441-443
    • Turner, P.E.1    Chao, L.2
  • 138
    • 7444249602 scopus 로고    scopus 로고
    • From ORFeomes to protein interaction maps in viruses
    • Uetz, P., Rajagopala, S. V., Dong, Y. A., and Haas, J. 2004. From ORFeomes to protein interaction maps in viruses. Genome Res. 14:2029-2033. (Pubitemid 39440182)
    • (2004) Genome Research , vol.14 , Issue.10 B , pp. 2029-2033
    • Uetz, P.1    Rajagopala, S.V.2    Dong, Y.-A.3    Haas, J.4
  • 139
    • 17444420821 scopus 로고    scopus 로고
    • Homologous crossovers among molecules of brome mosaic bromovirus RNA1 or RNA2 segments in vivo
    • DOI 10.1128/JVI.79.9.5732-5742.2005
    • Urbanowicz, A., Alejska, M., Formanowicz, P., Blazewicz, J., Fligerowicz, M., and Bujarski, J. J. 2005. Homologous crossover among molecules of Brome mosaic virus RNA1 and RNA2 segments in vivo. J. Virol. 79:5732-5742. (Pubitemid 40548242)
    • (2005) Journal of Virology , vol.79 , Issue.9 , pp. 5732-5742
    • Urbanowicz, A.1    Alejska, M.2    Formanowicz, P.3    Blazewicz, J.4    Figlerowicz, M.5    Bujarski, J.J.6
  • 140
    • 0002716359 scopus 로고
    • Evaluation of Citrus tristeza virus isolates for cross protection of grapefruit in South-Africa
    • Vanvuuren, S. P., Collins, R. P., and Dagraca, J. V. 1993. Evaluation of Citrus tristeza virus isolates for cross protection of grapefruit in South-Africa. Plant Dis. 77:24-28.
    • (1993) Plant Dis. , vol.77 , pp. 24-28
    • Vanvuuren, S.P.1    Collins, R.P.2    Dagraca, J.V.3
  • 141
    • 0942297973 scopus 로고    scopus 로고
    • Proteome analysis of cultivar-specific deregulations of Oryza sativa indica and O. sativa japonica cellular suspensions undergoing Rice yellow mottle virus infection
    • DOI 10.1002/pmic.200300502
    • Ventelon-Debout, M., Delalande, F., Brizard, J. P., Diemer, H., Van Dorsselaer, A., and Brugidou, C. 2004. Proteome analysis of cultivarspecific deregulations of Oryza sativa indica and O. sativa japonica cellular suspensions undergoing Rice yellow mottle virus infection. Proteomics 4:216-225. (Pubitemid 38140886)
    • (2004) Proteomics , vol.4 , Issue.1 , pp. 216-225
    • Ventelon-Debout, M.1    Delalande, F.2    Brizard, J.-P.3    Diemer, H.4    Van Dorsselaer, A.5    Brugidou, C.6
  • 142
    • 0036788880 scopus 로고    scopus 로고
    • Low genetic variation between isolates of Citrus leaf blotch virus from different host species and of different geographical origins
    • Vives, M. C., Rubio, L., Galipienso, L., Navarro, L., Moreno, P., and Guerri, J. 2002. Low genetic variation between isolates of Citrus leaf blotch virus from different host species and of different geographical origins. J. Gen. Virol. 83:2587-2591.
    • (2002) J. Gen. Virol. , vol.83 , pp. 2587-2591
    • Vives, M.C.1    Rubio, L.2    Galipienso, L.3    Navarro, L.4    Moreno, P.5    Guerri, J.6
  • 143
    • 11344264156 scopus 로고    scopus 로고
    • Evidence of multiple recombination events between two RNA sequence variants within a Citrus tristeza virus isolate
    • DOI 10.1016/j.virol.2004.10.037, PII S0042682204007184
    • Vives, M. C., Rubio, L., Sambade, A., Mirkov, T. E., Moreno, P., and Guerri, J. 2005. Evidence of multiple recombination events between two RNA sequence variants within a Citrus tristeza virus isolate. Virology 331:232-237. (Pubitemid 40075451)
    • (2005) Virology , vol.331 , Issue.2 , pp. 232-237
    • Vives, M.C.1    Rubio, L.2    Sambade, A.3    Mirkov, T.E.4    Moreno, P.5    Guerri, J.6
  • 144
    • 39149122315 scopus 로고    scopus 로고
    • Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversity
    • Weng, Z., Barthelson, R., Gowda, S., Hilf, M. E., Dawson, W. O., Galbraith, D. W., and Xiong, Z. 2007. Persistent infection and promiscuous recombination of multiple genotypes of an RNA virus within a single host generate extensive diversity. PLoS ONE 2:e917.
    • (2007) PLoS ONE , vol.2
    • Weng, Z.1    Barthelson, R.2    Gowda, S.3    Hilf, M.E.4    Dawson, W.O.5    Galbraith, D.W.6    Xiong, Z.7
  • 145
    • 0037261908 scopus 로고    scopus 로고
    • Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants
    • DOI 10.1046/j.1365-313X.2003.01625.x
    • Whitham, S. A., Quan, S., Chang, H. S., Cooper, B., Estes, B., Zhu, T., Wang, X., and Hou, Y. M. 2003. Diverse RNA viruses elicit the expression of common sets of genes in susceptible Arabidopsis thaliana plants. Plant J. 33:271-283. (Pubitemid 36178006)
    • (2003) Plant Journal , vol.33 , Issue.2 , pp. 271-283
    • Whitham, S.A.1    Quan, S.2    Chang, H.-S.3    Cooper, B.4    Estes, B.5    Zhu, T.6    Wang, X.7    Hou, Y.-M.8
  • 146
    • 3042761274 scopus 로고    scopus 로고
    • Roles for host factors in plant viral pathogenicity
    • DOI 10.1016/j.pbi.2004.04.006, PII S1369526604000652
    • Whitham, S. A., and Wang, Y. 2004. Roles for host factors in plant viral pathogenicity. Curr. Opin. Plant. Biol. 7:365-371. (Pubitemid 38871608)
    • (2004) Current Opinion in Plant Biology , vol.7 , Issue.4 , pp. 365-371
    • Whitham, S.A.1    Wang, Y.2
  • 147
    • 57449120943 scopus 로고    scopus 로고
    • Co-infection by two criniviruses alters accumulation of each virus in a host-specific manner and influences efficiency of virus transmission
    • Wintermantel, W. M., Cortez, A. A., Anchieta, A. G., Gulati-Sakhuja, A., and Hladky, L. L. 2008. Co-infection by two criniviruses alters accumulation of each virus in a host-specific manner and influences efficiency of virus transmission. Phytopathology 98:1340-1345.
    • (2008) Phytopathology , vol.98 , pp. 1340-1345
    • Wintermantel, W.M.1    Cortez, A.A.2    Anchieta, A.G.3    Gulati-Sakhuja, A.4    Hladky, L.L.5
  • 149
    • 60249103216 scopus 로고    scopus 로고
    • Assessment of codivergence of mastreviruses with their plant hosts
    • Wu, B., Melcher, U., Guo, X., Wang, X., Fan, L., and Zhou, G. 2008. Assessment of codivergence of mastreviruses with their plant hosts. BMC Evol. Biol. 8:335.
    • (2008) BMC Evol. Biol. , vol.8 , pp. 335
    • Wu, B.1    Melcher, U.2    Guo, X.3    Wang, X.4    Fan, L.5    Zhou, G.6
  • 152
    • 0032882070 scopus 로고    scopus 로고
    • Molecular characterization of an isolate of citrus tristeza virus that causes severe symptoms in sweet orange
    • DOI 10.1023/A:1008127224147
    • Yang, Z. N., Mathews, D. M., Dodds, J. A., and Mirkov, T. E. 1999. Molecular characterization of an isolate of Citrus tristeza virus that causes severe symptoms in sweet orange. Virus Genes 19:131-142. (Pubitemid 29469080)
    • (1999) Virus Genes , vol.19 , Issue.2 , pp. 131-142
    • Yang, Z.-N.1    Mathews, D.M.2    Dodds, J.A.3    Mirkov, T.E.4
  • 153
    • 43549096950 scopus 로고    scopus 로고
    • A genomic map of viroid RNA motifs critical for replication and systemic trafficking
    • DOI 10.1105/tpc.107.056606
    • Zhong, X., Archuall, A. J., Amin, A. A., and Ding, B. 2008. A genomic map of viroid RNA motifs critical for replication and systemic trafficking. Plant Cell 20:35-47. (Pubitemid 352844032)
    • (2008) Plant Cell , vol.20 , Issue.1 , pp. 35-47
    • Zhong, X.1    Archual, A.J.2    Amin, A.A.3    Ding, B.4


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