-
1
-
-
0032977607
-
Recombination in RNA viruses and in virus-resistant transgenic plants
-
R Aaziz M Tepfer 1999 Recombination in RNA viruses and in virus-resistant transgenic plants J Gen Virol 80 1339 1346
-
(1999)
J Gen Virol
, vol.80
, pp. 1339-1346
-
-
Aaziz, R.1
Tepfer, M.2
-
3
-
-
2642659238
-
Molecular systematics of the flaviviruses and their relatives
-
Gibbs AJ, Calisher CH, Garcia-Arenal F (eds), Cambridge University Press, Cambridge
-
Blok J, Gibbs AJ (1995) Molecular systematics of the flaviviruses and their relatives. In: Gibbs AJ, Calisher CH, Garcia-Arenal F (eds), Molecular basis of virus evolution. Cambridge University Press, Cambridge, pp 270-289
-
(1995)
Molecular Basis of Virus Evolution
, pp. 270-289
-
-
Blok, J.1
Gibbs, A.J.2
-
4
-
-
12344296268
-
Role of recombination in the evolution of natural populations of Cucumber mosaic virus, a tripartite RNA plant virus
-
J Bonnet A Fraile S Sacristan JM Malpica F Garcia-Arenal 2005 Role of recombination in the evolution of natural populations of Cucumber mosaic virus, a tripartite RNA plant virus Virology 332 359 368
-
(2005)
Virology
, vol.332
, pp. 359-368
-
-
Bonnet, J.1
Fraile, A.2
Sacristan, S.3
Malpica, J.M.4
Garcia-Arenal, F.5
-
5
-
-
0141850272
-
Origin, world-wide dispersion, bio-geographical diversification, radiation and recombination: An evolutionary history of the Yam mild mosaic virus (YMMV)
-
M Bousalem S Dallot S Fuji KT Natsuaki 2003 Origin, world-wide dispersion, bio-geographical diversification, radiation and recombination: an evolutionary history of the Yam mild mosaic virus (YMMV) Infect Genet Evol 3 189 206
-
(2003)
Infect Genet Evol
, vol.3
, pp. 189-206
-
-
Bousalem, M.1
Dallot, S.2
Fuji, S.3
Natsuaki, K.T.4
-
6
-
-
0033970716
-
High genetic diversity, distant phylogenetic relationships and intraspecies recombination events among natural populations of Yam mosaic virus: A contribution to understanding potyvirus evolution
-
M Bousalem EJP Douzery D Fargette 2000 High genetic diversity, distant phylogenetic relationships and intraspecies recombination events among natural populations of Yam mosaic virus: a contribution to understanding potyvirus evolution J Gen Virol 81 243 255
-
(2000)
J Gen Virol
, vol.81
, pp. 243-255
-
-
Bousalem, M.1
Douzery, E.J.P.2
Fargette, D.3
-
7
-
-
0022524928
-
Genetic recombination between RNA components of a multipartite plant virus
-
JJ Bujarski P Kaesberg 1986 Genetic recombination between RNA components of a multipartite plant virus Nature 321 528 531
-
(1986)
Nature
, vol.321
, pp. 528-531
-
-
Bujarski, J.J.1
Kaesberg, P.2
-
8
-
-
0142088791
-
Phylogenetic analysis reveals a low rate of homologous recombination in negative-sense RNA viruses
-
ER Chare EA Gould EC Holmes 2003 Phylogenetic analysis reveals a low rate of homologous recombination in negative-sense RNA viruses J Gen Virol 84 2691 2703
-
(2003)
J Gen Virol
, vol.84
, pp. 2691-2703
-
-
Chare, E.R.1
Gould, E.A.2
Holmes, E.C.3
-
9
-
-
3342978236
-
Sequences of flavivirus-related RNA viruses persist in DNA form integrated in the genome of Aedes spp. mosquitoes
-
S Crochu S Cook H Attoui RN Charrel RN De Chesse M Belhouchet JJ Lemasson P de Micco X de Lamballerie 2004 Sequences of flavivirus-related RNA viruses persist in DNA form integrated in the genome of Aedes spp. mosquitoes J Gen Virol 85 1971 1980
-
(2004)
J Gen Virol
, vol.85
, pp. 1971-1980
-
-
Crochu, S.1
Cook, S.2
Attoui, H.3
Charrel, R.N.4
De Chesse, R.N.5
Belhouchet, M.6
Lemasson, J.J.7
De Micco, P.8
De Lamballerie, X.9
-
10
-
-
0030747157
-
RNA virus mutations for fitness and survival
-
E Domingo JJ Holland 1997 RNA virus mutations for fitness and survival Annu Rev Microbiol 51 151 178
-
(1997)
Annu Rev Microbiol
, vol.51
, pp. 151-178
-
-
Domingo, E.1
Holland, J.J.2
-
12
-
-
0032748221
-
Rate of deleterious mutation and the distribution of its effects on fitness in Vesicular stomatitis virus
-
SF Elena A Moya 1999 Rate of deleterious mutation and the distribution of its effects on fitness in Vesicular stomatitis virus J Evol Biol 12 1078 1088
-
(1999)
J Evol Biol
, vol.12
, pp. 1078-1088
-
-
Elena, S.F.1
Moya, A.2
-
14
-
-
18044386958
-
Recombination every day: Abundant recombination in a virus during a single multi-cellular host infection
-
R Froissart D Rose M Uzest L Galibert S Blanc Y Michalakis 2005 Recombination every day: Abundant recombination in a virus during a single multi-cellular host infection PloS Biol 3 e89
-
(2005)
PloS Biol
, vol.3
, pp. 89
-
-
Froissart, R.1
Rose, D.2
Uzest, M.3
Galibert, L.4
Blanc, S.5
Michalakis, Y.6
-
15
-
-
0026580846
-
Agroinfection of transgenic plants leads to viable Cauliflower mosaic virus by intermolecular recombination
-
S Gal B Pisan T Hohn N Grimsley B Hohn 1992 Agroinfection of transgenic plants leads to viable Cauliflower mosaic virus by intermolecular recombination Virology 187 525 533
-
(1992)
Virology
, vol.187
, pp. 525-533
-
-
Gal, S.1
Pisan, B.2
Hohn, T.3
Grimsley, N.4
Hohn, B.5
-
16
-
-
0002590141
-
The luteovirus supergroup: Rampant recombination and persistent partnerships
-
Gibbs AJ, Calisher CH, Garcia-Arenal F (eds), Cambridge University Press, Cambridge
-
Gibbs M (1995) The luteovirus supergroup: rampant recombination and persistent partnerships. In: Gibbs AJ, Calisher CH, Garcia-Arenal F (eds), Molecular basis of virus evolution. Cambridge University Press, Cambridge, pp 351-368
-
(1995)
Molecular Basis of Virus Evolution
, pp. 351-368
-
-
Gibbs, M.1
-
17
-
-
0028278710
-
Recombination between viral RNA and transgenic plant transcripts
-
AE Greene RF Allison 1994 Recombination between viral RNA and transgenic plant transcripts Science 263 1423 1425
-
(1994)
Science
, vol.263
, pp. 1423-1425
-
-
Greene, A.E.1
Allison, R.F.2
-
18
-
-
0030296835
-
Deletions in the 3′ untranslated region of Cowpea chlorotic mottle virus transgene reduce recovery of recombinant viruses in transgenic plants
-
AE Greene RF Allison 1996 Deletions in the 3′ untranslated region of Cowpea chlorotic mottle virus transgene reduce recovery of recombinant viruses in transgenic plants Virology 225 231 234
-
(1996)
Virology
, vol.225
, pp. 231-234
-
-
Greene, A.E.1
Allison, R.F.2
-
19
-
-
0026648873
-
Genetically engineered rice resistant to Rice stripe virus, an insect-transmitted virus
-
T Hayakawa Y Zhu K Itoh Y Kimura T Izawa K Shimamoto S Toriyama 1992 Genetically engineered rice resistant to Rice stripe virus, an insect-transmitted virus Proc Natl Acad Sci USA 89 9865 9869
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 9865-9869
-
-
Hayakawa, T.1
Zhu, Y.2
Itoh, K.3
Kimura, Y.4
Izawa, T.5
Shimamoto, K.6
Toriyama, S.7
-
20
-
-
0025635705
-
Retroviral recombination and reverse transcription
-
WS Hu HM Temin 1990 Retroviral recombination and reverse transcription Science 250 1227 1233
-
(1990)
Science
, vol.250
, pp. 1227-1233
-
-
Hu, W.S.1
Temin, H.M.2
-
21
-
-
0037062939
-
Multiply infected spleen cells in HIV patients
-
A Jung R Maier JP Vartanian G Bocharov V Jung U Fischer E Meese S Wain-Hobson A Meyerhans 2002 Multiply infected spleen cells in HIV patients Nature 418 144
-
(2002)
Nature
, vol.418
, pp. 144
-
-
Jung, A.1
Maier, R.2
Vartanian, J.P.3
Bocharov, G.4
Jung, V.5
Fischer, U.6
Meese, E.7
Wain-Hobson, S.8
Meyerhans, A.9
-
22
-
-
0026602984
-
RNA recombination in animal and plant viruses
-
MMC Lai 1992 RNA recombination in animal and plant viruses Microbiol Rev 56 61 79
-
(1992)
Microbiol Rev
, vol.56
, pp. 61-79
-
-
Lai, M.M.C.1
-
23
-
-
0024425153
-
Homologous potyvirus and flavivirus proteins belonging to a superfamily of helicase-like proteins
-
S Lain JL Riechmann MT Martin JA Garcia 1989 Homologous potyvirus and flavivirus proteins belonging to a superfamily of helicase-like proteins Gene 82 357 362
-
(1989)
Gene
, vol.82
, pp. 357-362
-
-
Lain, S.1
Riechmann, J.L.2
Martin, M.T.3
Garcia, J.A.4
-
24
-
-
0029064916
-
The nucleotide sequence of the RNA-2 of an isolate of the English serotype of Tomato black ring virus: RNA recombination in the history of nepoviruses
-
OL Le Gall M Lanneau T Candresse J Dunez 1995 The nucleotide sequence of the RNA-2 of an isolate of the English serotype of Tomato black ring virus: RNA recombination in the history of nepoviruses J Gen Virol 76 1279 1283
-
(1995)
J Gen Virol
, vol.76
, pp. 1279-1283
-
-
Le Gall, O.L.1
Lanneau, M.2
Candresse, T.3
Dunez, J.4
-
25
-
-
0037234755
-
Genetic diversity and biological variation among California isolates of Cucumber mosaic virus
-
HX Lin L Rubio A Smythe M Jiminez BW Falk 2003 Genetic diversity and biological variation among California isolates of Cucumber mosaic virus J Gen Virol 84 249 258
-
(2003)
J Gen Virol
, vol.84
, pp. 249-258
-
-
Lin, H.X.1
Rubio, L.2
Smythe, A.3
Jiminez, M.4
Falk, B.W.5
-
26
-
-
0030862820
-
Natural recombination among plant virus genomes: Evidence from tobraviruses
-
S [tmp] MacFarlane 1997 Natural recombination among plant virus genomes: evidence from tobraviruses Semin Virol 8 25 31
-
(1997)
Semin Virol
, vol.8
, pp. 25-31
-
-
MacFarlane, S.1
-
28
-
-
0030900659
-
Engineering of homologous recombination hotspots with AU-rich sequences in Brome mosaic virus
-
PD Nagy JJ Bujarski 1997 Engineering of homologous recombination hotspots with AU-rich sequences in Brome mosaic virus J Virol 71 3799 3810
-
(1997)
J Virol
, vol.71
, pp. 3799-3810
-
-
Nagy, P.D.1
Bujarski, J.J.2
-
29
-
-
0036272754
-
Molecular evolution of Turnip mosaic virus: Evidence of host adaptation, genetic recombination and geographical spread
-
K Ohshima Y Yamaguchi R Hirota T Hamamoto K Tomimura Z Tan T Sano F Azuhata JA Walsh J Fletcher J Chen A Gera A Gibbs 2002 Molecular evolution of Turnip mosaic virus: evidence of host adaptation, genetic recombination and geographical spread J Gen Virol 83 1511 1521
-
(2002)
J Gen Virol
, vol.83
, pp. 1511-1521
-
-
Ohshima, K.1
Yamaguchi, Y.2
Hirota, R.3
Hamamoto, T.4
Tomimura, K.5
Tan, Z.6
Sano, T.7
Azuhata, F.8
Walsh, J.A.9
Fletcher, J.10
Chen, J.11
Gera, A.12
Gibbs, A.13
-
30
-
-
0033590220
-
Possible emergence of new geminiviruses by frequent recombination
-
M Padidam S Sawyer CM Fauquet 1999 Possible emergence of new geminiviruses by frequent recombination Virology 265 218 255
-
(1999)
Virology
, vol.265
, pp. 218-255
-
-
Padidam, M.1
Sawyer, S.2
Fauquet, C.M.3
-
32
-
-
3142735308
-
Characterisation of a new potyvirus species infecting meadow saffron (Colchicum autumnale)
-
A Poutaraud C Desbiez O Lemaire H Lecoq E Herrbach 2004 Characterisation of a new potyvirus species infecting meadow saffron (Colchicum autumnale) Arch Virol 149 1267 1277
-
(2004)
Arch Virol
, vol.149
, pp. 1267-1277
-
-
Poutaraud, A.1
Desbiez, C.2
Lemaire, O.3
Lecoq, H.4
Herrbach, E.5
-
33
-
-
0030614142
-
Mechanisms of plant virus evolution
-
MJ Roossinck 1997 Mechanisms of plant virus evolution Annu Rev Phytopathol 35 191 209
-
(1997)
Annu Rev Phytopathol
, vol.35
, pp. 191-209
-
-
Roossinck, M.J.1
-
34
-
-
0034864956
-
Genetic variation of Citrus tristeza virus isolates from California and Spain: Evidence for mixed infections and recombination
-
L Rubio MA Ayllon P Kong A Fernandez M Polek J Guerri P Moreno BW Falk 2001 Genetic variation of Citrus tristeza virus isolates from California and Spain: Evidence for mixed infections and recombination J Virol 75 8054 8062
-
(2001)
J Virol
, vol.75
, pp. 8054-8062
-
-
Rubio, L.1
Ayllon, M.A.2
Kong, P.3
Fernandez, A.4
Polek, M.5
Guerri, J.6
Moreno, P.7
Falk, B.W.8
-
35
-
-
0024356449
-
Statistical tests for detecting gene conversion
-
S Sawyer 1989 Statistical tests for detecting gene conversion Mol Biol Evol 6 526 538
-
(1989)
Mol Biol Evol
, vol.6
, pp. 526-538
-
-
Sawyer, S.1
-
36
-
-
0027142836
-
Expansion of viral host range through comple- mentation and recombination in transgenic plants
-
JE Schoelz WM Wintermantel 1993 Expansion of viral host range through comple- mentation and recombination in transgenic plants Plant Cell 5 1669 1679
-
(1993)
Plant Cell
, vol.5
, pp. 1669-1679
-
-
Schoelz, J.E.1
Wintermantel, W.M.2
-
37
-
-
0000362473
-
Control of plant virus diseases by pathogen-derived resistance in transgenic plants
-
K Scholthof HB Scholthof AO Jackson 1993 Control of plant virus diseases by pathogen-derived resistance in transgenic plants Plant Physiol 102 7 12
-
(1993)
Plant Physiol
, vol.102
, pp. 7-12
-
-
Scholthof, K.1
Scholthof, H.B.2
Jackson, A.O.3
-
38
-
-
1242274560
-
The AU-rich RNA recombination hot spot sequence of Brome mosaic virus is functional in tombusviruses: Implications for the mechanism of RNA recombination
-
N Shapka PD Nagy 2004 The AU-rich RNA recombination hot spot sequence of Brome mosaic virus is functional in tombusviruses: Implications for the mechanism of RNA recombination J Virol 78 2288 2300
-
(2004)
J Virol
, vol.78
, pp. 2288-2300
-
-
Shapka, N.1
Nagy, P.D.2
-
40
-
-
0029836454
-
Quartet puzzling: A quartet maximum likelihood method for reconstructing tree topologies
-
K Strimmer A von Haesler 1996 Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies Mol Biol Evol 13 964 969
-
(1996)
Mol Biol Evol
, vol.13
, pp. 964-969
-
-
Strimmer, K.1
Von Haesler, A.2
-
41
-
-
0037294730
-
RNA recombination between cucumoviruses: Possible role of predicted stem-loop structures and an internal subgenomic promoter-like motif
-
M Suzuki T Hibi C Masuta 2003 RNA recombination between cucumoviruses: possible role of predicted stem-loop structures and an internal subgenomic promoter-like motif Virology 306 77 86
-
(2003)
Virology
, vol.306
, pp. 77-86
-
-
Suzuki, M.1
Hibi, T.2
Masuta, C.3
-
43
-
-
4544310024
-
Inter- and intralineage recombinants are common in natural populations of Turnip mosaic virus
-
Z Tan Y Wada J Chen K Ohshima 2004 Inter- and intralineage recombinants are common in natural populations of Turnip mosaic virus J Gen Virol 85 2683 2696
-
(2004)
J Gen Virol
, vol.85
, pp. 2683-2696
-
-
Tan, Z.1
Wada, Y.2
Chen, J.3
Ohshima, K.4
-
44
-
-
0031574072
-
The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignments aided by quality analysis tools
-
JD Thompson TJ Gibson F Plewniak F Jeanmougin DG Higgins 1997 The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignments aided by quality analysis tools Nucleic Acids Res 25 4876 4882
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
45
-
-
11344264156
-
Evidence of multiple recombination events between two RNA sequence variants within a Citrus tristeza virus isolate
-
MC Vives L Rubio A Sambade TE Mirkov P Moreno J Guerri 2005 Evidence of multiple recombination events between two RNA sequence variants within a Citrus tristeza virus isolate Virology 331 232 237
-
(2005)
Virology
, vol.331
, pp. 232-237
-
-
Vives, M.C.1
Rubio, L.2
Sambade, A.3
Mirkov, T.E.4
Moreno, P.5
Guerri, J.6
-
46
-
-
0032889340
-
Defective and defective interfering RNAs of monopartite plus-strand RNA plant viruses
-
KA White TJ Morris 1999 Defective and defective interfering RNAs of monopartite plus-strand RNA plant viruses Curr Top Microbiol Immunol 239 1 17
-
(1999)
Curr Top Microbiol Immunol
, vol.239
, pp. 1-17
-
-
White, K.A.1
Morris, T.J.2
-
47
-
-
0030245736
-
Isolation of recombinant virus between Cauliflower mosaic virus and a viral gene in transgenic plants under conditions of moderate selection pressure
-
WM Wintermantel JE Schoelz 1996 Isolation of recombinant virus between Cauliflower mosaic virus and a viral gene in transgenic plants under conditions of moderate selection pressure Virology 223 156 164
-
(1996)
Virology
, vol.223
, pp. 156-164
-
-
Wintermantel, W.M.1
Schoelz, J.E.2
-
48
-
-
0032853634
-
Evolutionary aspects of recombination in RNA viruses
-
M Worobey EC Holmes 1999 Evolutionary aspects of recombination in RNA viruses J Gen Virol 80 2535 2543
-
(1999)
J Gen Virol
, vol.80
, pp. 2535-2543
-
-
Worobey, M.1
Holmes, E.C.2
|