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Volumn 21, Issue 10, 2011, Pages 1563-1571

Loss of exon identity is a common mechanism of human inherited disease

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CIS ACTING ELEMENT;

EID: 79960607075     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.118638.110     Document Type: Article
Times cited : (142)

References (73)
  • 2
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. 1995. Controlling the false discovery rate: A practical and powerful approach to multiple testing. J R Stat Soc Ser B Methodol 57: 289-300.
    • (1995) J R Stat Soc Ser B Methodol , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 3
    • 40849147354 scopus 로고    scopus 로고
    • New TFR2 mutations in young Italian patients with hemochromatosis
    • DOI 10.3324/haematol.11942
    • Biasiotto G, Camaschella C, Forni GL, Polotti A, Zecchina G, Arosio P. 2008. New TFR2 mutations in young Italian patients with hemochromatosis. Haematologica 93: 309-310. (Pubitemid 351397724)
    • (2008) Haematologica , vol.93 , Issue.2 , pp. 309-310
    • Biasiotto, G.1    Camaschella, C.2    Forni, G.L.3    Polotti, A.4    Zecchina, G.5    Arosio, P.6
  • 4
    • 0242418246 scopus 로고    scopus 로고
    • Phylogenetic shadowing of primate sequences to find functional regions of the human genome
    • DOI 10.1126/science.1081331
    • Boffelli D, McAuliffe J, Ovcharenko D, Lewis KD, Ovcharenko I, Pachter L, Rubin EM. 2003. Phylogenetic shadowing of primate sequences to find functional regions of the human genome. Science 299: 1391-1394. (Pubitemid 36254651)
    • (2003) Science , vol.299 , Issue.5611 , pp. 1391-1394
    • Boffelli, D.1    McAuliffe, J.2    Ovcharenko, D.3    Lewis, K.D.4    Ovcharenko, I.5    Pachter, L.6    Rubin, E.M.7
  • 7
    • 0035941211 scopus 로고    scopus 로고
    • Determination of the RNA binding specificity of the heterogeneous nuclear ribonucleoprotein (hnRNP) H/H9/F/2H9 family
    • Caputi M, Zahler AM. 2001. Determination of the RNA binding specificity of the heterogeneous nuclear ribonucleoprotein (hnRNP) H/H9/F/2H9 family. J Biol Chem 276: 43850-43859.
    • (2001) J Biol Chem , vol.276 , pp. 43850-43859
    • Caputi, M.1    Zahler, A.M.2
  • 8
    • 0036544654 scopus 로고    scopus 로고
    • Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1
    • Cartegni L, Krainer AR. 2002. Disruption of an SF2/ASF-dependent exonic splicing enhancer in SMN2 causes spinal muscular atrophy in the absence of SMN1. Nat Genet 30: 377-384.
    • (2002) Nat Genet , vol.30 , pp. 377-384
    • Cartegni, L.1    Krainer, A.R.2
  • 9
    • 0036207384 scopus 로고    scopus 로고
    • Listening to silence and understanding nonsense: Exonic mutations that affect splicing
    • DOI 10.1038/nrg775
    • Cartegni L, Chew SL, Krainer AR. 2002. Listening to silence and understanding nonsense: exonic mutations that affect splicing. Nat Rev Genet 3: 285-298. (Pubitemid 34279797)
    • (2002) Nature Reviews Genetics , vol.3 , Issue.4 , pp. 285-298
    • Cartegni, L.1    Chew, S.L.2    Krainer, A.R.3
  • 10
    • 0042242582 scopus 로고    scopus 로고
    • ESEfinder: A web resource to identify exonic splicing enhancers
    • DOI 10.1093/nar/gkg616
    • Cartegni L, Wang J, Zhu Z, Zhang MQ, Krainer AR. 2003. ESEfinder: a web resource to identify exonic splicing enhancers. Nucleic Acids Res 31: 3568-3571. (Pubitemid 37442199)
    • (2003) Nucleic Acids Research , vol.31 , Issue.13 , pp. 3568-3571
    • Cartegni, L.1    Wang, J.2    Zhu, Z.3    Zhang, M.Q.4    Krainer, A.R.5
  • 11
    • 31144465926 scopus 로고    scopus 로고
    • Hearing silence: Non-neutral evolution at synonymous sites in mammals
    • DOI 10.1038/nrg1770, PII NRG1770
    • Chamary JV, Parmley JL, Hurst LD. 2006. Hearing silence: non-neutral evolution at synonymous sites in mammals. Nat Rev Genet 7: 98-108. (Pubitemid 43128905)
    • (2006) Nature Reviews Genetics , vol.7 , Issue.2 , pp. 98-108
    • Chamary, J.V.1    Parmley, J.L.2    Hurst, L.D.3
  • 15
    • 0033762534 scopus 로고    scopus 로고
    • Selection of alternative 59 splice sites: Role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1
    • Eperon IC, Makarova OV, Mayeda A, Munroe SH, Caceres JF, Hayward DG, Krainer AR. 2000. Selection of alternative 59 splice sites: Role of U1 snRNP and models for the antagonistic effects of SF2/ASF and hnRNP A1. Mol Cell Biol 20: 8303-8318.
    • (2000) Mol Cell Biol , vol.20 , pp. 8303-8318
    • Eperon, I.C.1    Makarova, O.V.2    Mayeda, A.3    Munroe, S.H.4    Caceres, J.F.5    Hayward, D.G.6    Krainer, A.R.7
  • 16
    • 0037047644 scopus 로고    scopus 로고
    • Predictive identification of exonic splicing enhancers in human genes
    • DOI 10.1126/science.1073774
    • Fairbrother WG, Yeh RF, Sharp PA, Burge CB. 2002. Predictive identification of exonic splicing enhancers in human genes. Science 297: 1007-1013. (Pubitemid 34856033)
    • (2002) Science , vol.297 , Issue.5583 , pp. 1007-1013
    • Fairbrother, W.G.1    Yeh, R.-F.2    Sharp, P.A.3    Burge, C.B.4
  • 17
    • 19344367734 scopus 로고    scopus 로고
    • Single nucleotide polymorphism-based validation of exonic splicing enhancers
    • doi: 10.1371/journal.pbio.0020268
    • Fairbrother WG, Holste D, Burge CB, Sharp PA. 2004. Single nucleotide polymorphism-based validation of exonic splicing enhancers. PLoS Biol 2: e268. doi: 10.1371/journal.pbio.0020268.
    • (2004) PLoS Biol , vol.2
    • Fairbrother, W.G.1    Holste, D.2    Burge, C.B.3    Sharp, P.A.4
  • 18
    • 63849281404 scopus 로고    scopus 로고
    • Common polymorphic transcript variation in human disease
    • Fraser HB, Xie X. 2009. Common polymorphic transcript variation in human disease. Genome Res 19: 567-575.
    • (2009) Genome Res , vol.19 , pp. 567-575
    • Fraser, H.B.1    Xie, X.2
  • 20
    • 33745207758 scopus 로고    scopus 로고
    • Comparative analysis identifies exonic splicing regulatory sequences - The complex definition of enhancers and silencers
    • Goren A, Ram O, Amit M, Keren H, Lev-Maor G, Vig I, Pupko T, Ast G. 2006. Comparative analysis identifies exonic splicing regulatory sequences - the complex definition of enhancers and silencers. Mol Cell 22: 769-781.
    • (2006) Mol Cell , vol.22 , pp. 769-781
    • Goren, A.1    Ram, O.2    Amit, M.3    Keren, H.4    Lev-Maor, G.5    Vig, I.6    Pupko, T.7    Ast, G.8
  • 22
    • 0032038213 scopus 로고    scopus 로고
    • Arginine/serine-rich domains of SR proteins can function as activators of pre-mRNA splicing
    • Graveley BR, Maniatis T. 1998. Arginine/serine-rich domains of SR proteins can function as activators of pre-mRNA splicing. Mol Cell 1: 765-771. (Pubitemid 128379254)
    • (1998) Molecular Cell , vol.1 , Issue.5 , pp. 765-771
    • Graveley, B.R.1    Maniatis, T.2
  • 23
    • 0034743627 scopus 로고    scopus 로고
    • 65 in enhancer-dependent splicing
    • DOI 10.1017/S1355838201010317
    • Graveley BR, Hertel KJ, Maniatis T. 2001. The role of U2AF35 and U2AF65 in enhancer-dependent splicing. RNA 7: 806-818. (Pubitemid 32552869)
    • (2001) RNA , vol.7 , Issue.6 , pp. 806-818
    • Graveley, B.R.1    Hertel, K.J.2    Maniatis, T.O.M.3
  • 25
    • 77951120000 scopus 로고    scopus 로고
    • Alternative splicing and evolution: Diversification, exon definition and function
    • Keren H, Lev-Maor G, Ast G. 2010. Alternative splicing and evolution: diversification, exon definition and function. Nat Rev Genet 11: 345-355.
    • (2010) Nat Rev Genet , vol.11 , pp. 345-355
    • Keren, H.1    Lev-Maor, G.2    Ast, G.3
  • 27
    • 33846934728 scopus 로고    scopus 로고
    • Single base-pair substitutions in exon-intron junctions of human genes: Nature, distribution, and consequences for mRNA splicing
    • DOI 10.1002/humu.20400
    • Krawczak M, Thomas NS, Hundrieser B, Mort M, Wittig M, Hampe J, Cooper DN. 2007. Single base-pair substitutions in exon-intron junctions of human genes: nature, distribution, and consequences for mRNA splicing. Hum Mutat 28: 150-158. (Pubitemid 46233312)
    • (2007) Human Mutation , vol.28 , Issue.2 , pp. 150-158
    • Krawczak, M.1    Thomas, N.S.T.2    Hundrieser, B.3    Mort, M.4    Wittig, M.5    Hampe, J.6    Cooper, D.N.7
  • 28
    • 69749093207 scopus 로고    scopus 로고
    • Positional conservation and amino acids shape the correct diagnosis and population frequencies of benign and damaging personal amino acid mutations
    • Kumar S, Suleski MP, Markov GJ, Lawrence S, Marco A, Filipski AJ. 2009. Positional conservation and amino acids shape the correct diagnosis and population frequencies of benign and damaging personal amino acid mutations. Genome Res 19: 1562-1569.
    • (2009) Genome Res , vol.19 , pp. 1562-1569
    • Kumar, S.1    Suleski, M.P.2    Markov, G.J.3    Lawrence, S.4    Marco, A.5    Filipski, A.J.6
  • 29
    • 34247330971 scopus 로고    scopus 로고
    • Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements
    • DOI 10.1038/nature05676, PII NATURE05676
    • Lareau LF, Inada M, Green RE, Wengrod JC, Brenner SE. 2007. Unproductive splicing of SR genes associated with highly conserved and ultraconserved DNA elements. Nature 446: 926-929. (Pubitemid 46633161)
    • (2007) Nature , vol.446 , Issue.7138 , pp. 926-929
    • Lareau, L.F.1    Inada, M.2    Green, R.E.3    Wengrod, J.C.4    Brenner, S.E.5
  • 31
    • 79960594889 scopus 로고    scopus 로고
    • Using positional distribution to identify splicing elements and predict premRNA processing defects in human genes
    • Lim KH, Ferraris L, Filloux ME, Raphael BJ, Fairbrother WG. 2011. Using positional distribution to identify splicing elements and predict premRNA processing defects in human genes. Proc Natl Acad Sci 108: 11093-11098.
    • (2011) Proc Natl Acad Sci , vol.108 , pp. 11093-11098
    • Lim, K.H.1    Ferraris, L.2    Filloux, M.E.3    Raphael, B.J.4    Fairbrother, W.G.5
  • 32
    • 0032128255 scopus 로고    scopus 로고
    • Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins
    • Liu HX, Zhang M, Krainer AR. 1998. Identification of functional exonic splicing enhancer motifs recognized by individual SR proteins. Genes Dev 12: 1998-2012. (Pubitemid 28323874)
    • (1998) Genes and Development , vol.12 , Issue.13 , pp. 1998-2012
    • Liu, H.-X.1    Zhang, M.2    Krainer, A.R.3
  • 33
    • 0035158730 scopus 로고    scopus 로고
    • A mechanism for exon skipping caused by nonsense or missense mutations in BRCA1 and other genes
    • DOI 10.1038/83762
    • Liu HX, Cartegni L, Zhang MQ, Krainer AR. 2001. A mechanism for exon skipping caused by nonsense or missense mutations in BRCA1 and other genes. Nat Genet 27: 55-58. (Pubitemid 32044518)
    • (2001) Nature Genetics , vol.27 , Issue.1 , pp. 55-58
    • Liu, H.-X.1    Cartegni, L.2    Zhang, M.Q.3    Krainer, A.R.4
  • 34
    • 0036911605 scopus 로고    scopus 로고
    • Distribution and characterization of regulatory elements in the human genome
    • DOI 10.1101/gr.606402
    • Majewski J, Ott J. 2002. Distribution and characterization of regulatory elements in the human genome. Genome Res 12: 1827-1836. (Pubitemid 35469931)
    • (2002) Genome Research , vol.12 , Issue.12 , pp. 1827-1836
    • Majewski, J.1    Ott, J.2
  • 35
    • 0742323558 scopus 로고    scopus 로고
    • Nonsense-mediated mRNA decay: Splicing, translation and mRNP dynamics
    • DOI 10.1038/nrm1310
    • Maquat LE. 2004. Nonsense-mediated mRNA decay: splicing, translation and mRNP dynamics. Nat Rev Mol Cell Biol 5: 89-99. (Pubitemid 38160252)
    • (2004) Nature Reviews Molecular Cell Biology , vol.5 , Issue.2 , pp. 89-99
    • Maquat, L.E.1
  • 37
    • 48149095822 scopus 로고    scopus 로고
    • Alternative splicing resulting in nonsense-mediated mRNA decay: What is the meaning of nonsense?
    • McGlincy NJ, Smith CW. 2008. Alternative splicing resulting in nonsense-mediated mRNA decay: what is the meaning of nonsense? Trends Biochem Sci 33: 385-393.
    • (2008) Trends Biochem Sci , vol.33 , pp. 385-393
    • McGlincy, N.J.1    Smith, C.W.2
  • 38
    • 33947305594 scopus 로고    scopus 로고
    • Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay
    • DOI 10.1101/gad.1525507
    • Ni JZ, Grate L, Donohue JP, Preston C, Nobida N, O'Brien G, Shiue L, Clark TA, Blume JE, Ares M Jr. 2007. Ultraconserved elements are associated with homeostatic control of splicing regulators by alternative splicing and nonsense-mediated decay. Genes Dev 21: 708-718. (Pubitemid 46440292)
    • (2007) Genes and Development , vol.21 , Issue.6 , pp. 708-718
    • Ni, J.Z.1    Grate, L.2    Donohue, J.P.3    Preston, C.4    Nobida, N.5    O'Brien, G.6    Shiue, L.7    Clark, T.A.8    Blume, J.E.9    Ares Jr., M.10
  • 39
    • 0035005985 scopus 로고    scopus 로고
    • A strategy for disease gene identification though nonsense-mediated mRNA decay inhibition
    • DOI 10.1038/88099
    • Noensie EN, Dietz HC. 2001. A strategy for disease gene identification through nonsense-mediated mRNA decay inhibition. Nat Biotechnol 19: 434-439. (Pubitemid 32428285)
    • (2001) Nature Biotechnology , vol.19 , Issue.5 , pp. 434-439
    • Noensie, E.N.1    Dietz, H.C.2
  • 41
    • 1942467065 scopus 로고    scopus 로고
    • Genomic variants in exons and introns: Identifying the splicing spoilers
    • DOI 10.1038/nrg1327
    • Pagani F, Baralle FE. 2004. Genomic variants in exons and introns: identifying the splicing spoilers. Nat Rev Genet 5: 389-396. (Pubitemid 38529410)
    • (2004) Nature Reviews Genetics , vol.5 , Issue.5 , pp. 389-396
    • Pagani, F.1    Baralle, F.E.2
  • 42
    • 0038712558 scopus 로고    scopus 로고
    • Missense, nonsense, and neutral mutations define juxtaposed regulatory elements of splicing in cystic fibrosis transmembrane regulator exon 9
    • DOI 10.1074/jbc.M212813200
    • Pagani F, Buratti E, Stuani C, Baralle FE. 2003. Missense, nonsense, and neutral mutations define juxtaposed regulatory elements of splicing in cystic fibrosis transmembrane regulator exon 9. J Biol Chem 278: 26580-26588. (Pubitemid 36876802)
    • (2003) Journal of Biological Chemistry , vol.278 , Issue.29 , pp. 26580-26588
    • Pagani, F.1    Buratti, E.2    Stuani, C.3    Baralle, F.E.4
  • 44
    • 30744469841 scopus 로고    scopus 로고
    • Evidence for purifying selection against synonymous mutations in mammalian exonic splicing enhancers
    • DOI 10.1093/molbev/msj035
    • Parmley JL, Chamary JV, Hurst LD. 2006. Evidence for purifying selection against synonymous mutations in mammalian exonic splicing enhancers. Mol Biol Evol 23: 301-309. (Pubitemid 43100044)
    • (2006) Molecular Biology and Evolution , vol.23 , Issue.2 , pp. 301-309
    • Parmley, J.L.1    Chamary, J.V.2    Hurst, L.D.3
  • 45
    • 0033434080 scopus 로고    scopus 로고
    • Probability-based protein identification by searching sequence databases using mass spectrometry data
    • Perkins DN, Pappin DJ, Creasy DM, Cottrell JS. 1999. Probability-based protein identification by searching sequence databases using mass spectrometry data. Electrophoresis 20: 3551-3567. (Pubitemid 30007252)
    • (1999) Electrophoresis , vol.20 , Issue.18 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.C.2    Creasy, D.M.3    Cottrell, J.S.4
  • 46
    • 74949092081 scopus 로고    scopus 로고
    • Detection of nonneutral substitution rates on mammalian phylogenies
    • Pollard KS, Hubisz MJ, Rosenbloom KR, Siepel A. 2009. Detection of nonneutral substitution rates on mammalian phylogenies. Genome Res 20: 110-121.
    • (2009) Genome Res , vol.20 , pp. 110-121
    • Pollard, K.S.1    Hubisz, M.J.2    Rosenbloom, K.R.3    Siepel, A.4
  • 47
    • 77949531040 scopus 로고    scopus 로고
    • NeatMap - Non-clustering heat map alternatives in R
    • Rajaram S, Oono Y. 2010. NeatMap - non-clustering heat map alternatives in R. BMC Bioinformatics 11: 45.
    • (2010) BMC Bioinformatics , vol.11 , pp. 45
    • Rajaram, S.1    Oono, Y.2
  • 48
    • 33845657405 scopus 로고    scopus 로고
    • SR proteins: A foot on the exon before the transition from intron to exon definition
    • DOI 10.1016/j.tig.2006.10.002, PII S0168952506003453
    • Ram O, Ast G. 2007. SR proteins: a foot on the exon before the transition from intron to exon definition. Trends Genet 23: 5-7. (Pubitemid 44960527)
    • (2007) Trends in Genetics , vol.23 , Issue.1 , pp. 5-7
    • Ram, O.1    Ast, G.2
  • 49
    • 0345276470 scopus 로고    scopus 로고
    • A conserved signal-responsive sequence mediates activation-induced alternative splicing of CD45
    • DOI 10.1016/S1097-2765(03)00434-9
    • Rothrock C, Cannon B, Hahm B, Lynch KW. 2003. A conserved signal-responsive sequencemediates activation-induced alternative splicing of CD45. Mol Cell 12: 1317-1324. (Pubitemid 37487938)
    • (2003) Molecular Cell , vol.12 , Issue.5 , pp. 1317-1324
    • Rothrock, C.1    Cannon, B.2    Hahm, B.3    Lynch, K.W.4
  • 51
    • 32444445017 scopus 로고    scopus 로고
    • Activation of cryptic splice sites is a frequent splicing defect mechanism caused by mutations in exon and intron sequences of the OPA1 gene
    • DOI 10.1007/s00439-005-0096-7
    • Schimpf S, Schaich S, Wissinger B. 2006. Activation of cryptic splice sites is a frequent splicing defect mechanism caused by mutations in exon and intron sequences of the OPA1 gene. Hum Genet 118: 767-771. (Pubitemid 43225023)
    • (2006) Human Genetics , vol.118 , Issue.6 , pp. 767-771
    • Schimpf, S.1    Schaich, S.2    Wissinger, B.3
  • 52
    • 38149058202 scopus 로고    scopus 로고
    • Comprehensive cDNA study and quantitative transcript analysis of mutant OPA1 transcripts containing premature termination codons
    • Schimpf S, Fuhrmann N, Schaich S, Wissinger B. 2008. Comprehensive cDNA study and quantitative transcript analysis of mutant OPA1 transcripts containing premature termination codons. Hum Mutat 29: 106-112.
    • (2008) Hum Mutat , vol.29 , pp. 106-112
    • Schimpf, S.1    Fuhrmann, N.2    Schaich, S.3    Wissinger, B.4
  • 54
    • 0030725216 scopus 로고    scopus 로고
    • Disruption of the splicing enhancer sequence within exon 27 of the dystrophin gene by a nonsense mutation induces partial skipping of the exon and is responsible for Becker muscular dystrophy
    • Shiga N, Takeshima Y, Sakamoto H, Inoue K, Yokota Y, Yokoyama M, Matsuo M. 1997. Disruption of the splicing enhancer sequence within exon 27 of the dystrophin gene by a nonsense mutation induces partial skipping of the exon and is responsible for Becker muscular dystrophy. J Clin Invest 100: 2204-2210. (Pubitemid 27500142)
    • (1997) Journal of Clinical Investigation , vol.100 , Issue.9 , pp. 2204-2210
    • Shiga, N.1    Takeshima, Y.2    Sakamoto, H.3    Inoue, K.4    Yokota, Y.5    Yokoyama, M.6    Matsuo, M.7
  • 56
  • 57
    • 0036393898 scopus 로고    scopus 로고
    • DTASelect and Contrast: Tools for assembling and comparing protein identifications from shotgun proteomics
    • Tabb DL, McDonald WH, Yates JR III. 2002. DTASelect and Contrast: Tools for assembling and comparing protein identifications from shotgun proteomics. J Proteome Res 1: 21-26.
    • (2002) J Proteome Res , vol.1 , pp. 21-26
    • Tabb, D.L.1    McDonald, W.H.2    Yates III, J.R.3
  • 58
    • 0029064220 scopus 로고
    • The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities
    • Tacke R, Manley JL. 1995. The human splicing factors ASF/SF2 and SC35 possess distinct, functionally significant RNA binding specificities. EMBO J 14: 3540-3551.
    • (1995) EMBO J , vol.14 , pp. 3540-3551
    • Tacke, R.1    Manley, J.L.2
  • 59
    • 0030973067 scopus 로고    scopus 로고
    • The association of nonsense mutation with exon-skipping in hprt mRNA of Chinese hamster ovary cells results from an artifact of RT-PCR
    • Valentine CR, Heflich RH. 1997. The association of nonsense mutation with exon-skipping in hprt mRNA of Chinese hamster ovary cells results from an artifact of RT-PCR. RNA 3: 660-676. (Pubitemid 27225275)
    • (1997) RNA , vol.3 , Issue.6 , pp. 660-676
    • Valentine, C.R.1    Heflich, R.H.2
  • 60
    • 7044227587 scopus 로고    scopus 로고
    • Stop codon-mediated suppression of splicing is a novel nuclear scanning mechanism not affected by elements of protein synthesis and NMD
    • DOI 10.1261/rna.7480804
    • Wachtel C, Li B, Sperling J, Sperling R. 2004. Stop codon-mediated suppression of splicing is a novel nuclear scanning mechanism not affected by elements of protein synthesis and NMD. RNA 10: 1740-1750. (Pubitemid 39426374)
    • (2004) RNA , vol.10 , Issue.11 , pp. 1740-1750
    • Wachtel, C.1    Li, B.2    Sperling, J.3    Sperling, R.4
  • 61
    • 34548758543 scopus 로고    scopus 로고
    • Splicing in disease: Disruption of the splicing code and the decoding machinery
    • DOI 10.1038/nrg2164, PII NRG2164
    • Wang GS, Cooper TA. 2007. Splicing in disease: disruption of the splicing code and the decoding machinery. Nat Rev Genet 8: 749-761. (Pubitemid 47429207)
    • (2007) Nature Reviews Genetics , vol.8 , Issue.10 , pp. 749-761
    • Wang, G.-S.1    Cooper, T.A.2
  • 62
    • 42449098125 scopus 로고    scopus 로고
    • Splicing regulation: From a parts list of regulatory elements to an integrated splicing code
    • DOI 10.1261/rna.876308
    • Wang Z, Burge CB. 2008. Splicing regulation: From a parts list of regulatory elements to an integrated splicing code. RNA 14: 802-813. (Pubitemid 351574901)
    • (2008) RNA , vol.14 , Issue.5 , pp. 802-813
    • Wang, Z.1    Burge, C.B.2
  • 63
    • 0036809882 scopus 로고    scopus 로고
    • Nonsense-associated altered splicing: A frame-dependent response distinct from nonsense-mediated decay
    • DOI 10.1016/S1097-2765(02)00635-4
    • Wang J, Chang YF, Hamilton JI, Wilkinson MF. 2002. Nonsense-associated altered splicing: A frame-dependent response distinct from nonsense-mediated decay. Mol Cell 10: 951-957. (Pubitemid 35335649)
    • (2002) Molecular Cell , vol.10 , Issue.4 , pp. 951-957
    • Wang, J.1    Chang, Y.-F.2    Hamilton, J.I.3    Wilkinson, M.F.4
  • 64
    • 10944256767 scopus 로고    scopus 로고
    • Systematic identification and analysis of exonic splicing silencers
    • DOI 10.1016/j.cell.2004.11.010, PII S0092867404010566
    • Wang Z, Rolish ME, Yeo G, Tung V, Mawson M, Burge CB. 2004. Systematic identification and analysis of exonic splicing silencers. Cell 119: 831-845. (Pubitemid 40017689)
    • (2004) Cell , vol.119 , Issue.6 , pp. 831-845
    • Wang, Z.1    Rolish, M.E.2    Yeo, G.3    Tung, V.4    Mawson, M.5    Burge, C.B.6
  • 65
    • 33745501015 scopus 로고    scopus 로고
    • General and Specific Functions of Exonic Splicing Silencers in Splicing Control
    • DOI 10.1016/j.molcel.2006.05.018, PII S1097276506003339
    • Wang Z, Xiao X, van Nostrand E, Burge CB. 2006. General and specific functions of exonic splicing silencers in splicing control. Mol Cell 23: 61-70. (Pubitemid 43963442)
    • (2006) Molecular Cell , vol.23 , Issue.1 , pp. 61-70
    • Wang, Z.1    Xiao, X.2    Van Nostrand, E.3    Burge, C.B.4
  • 66
    • 77649158879 scopus 로고    scopus 로고
    • Role of RNA structure in regulating pre-mRNA splicing
    • Warf MB, Berglund JA. 2010. Role of RNA structure in regulating pre-mRNA splicing. Trends Biochem Sci 35: 169-178.
    • (2010) Trends Biochem Sci , vol.35 , pp. 169-178
    • Warf, M.B.1    Berglund, J.A.2
  • 67
    • 0027288912 scopus 로고
    • The role of exon sequences in splice site selection
    • Watakabe A, Tanaka K, Shimura Y. 1993. The role of exon sequences in splice site selection. Genes Dev 7: 407-418. (Pubitemid 23139234)
    • (1993) Genes and Development , vol.7 , Issue.3 , pp. 407-418
    • Watakabe, A.1    Tanaka, K.2    Shimura, Y.3
  • 68
    • 72149117411 scopus 로고    scopus 로고
    • Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping
    • Xue Y, Zhou Y, Wu T, Zhu T, Ji X, Kwon YS, Zhang C, Yeo G, Black DL, Sun H, et al. 2009. Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping. Mol Cell 36: 996-1006.
    • (2009) Mol Cell , vol.36 , pp. 996-1006
    • Xue, Y.1    Zhou, Y.2    Wu, T.3    Zhu, T.4    Ji, X.5    Kwon, Y.S.6    Zhang, C.7    Yeo, G.8    Black, D.L.9    Sun, H.10
  • 69
    • 2442441507 scopus 로고    scopus 로고
    • Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals
    • DOI 10.1089/1066527041410418
    • Yeo G, Burge CB. 2004. Maximum entropy modeling of short sequence motifs with applications to RNA splicing signals. J Comput Biol 11: 377-394. (Pubitemid 38901668)
    • (2004) Journal of Computational Biology , vol.11 , Issue.2-3 , pp. 377-394
    • Yeo, G.1    Burge, C.B.2
  • 70
    • 10944229314 scopus 로고    scopus 로고
    • Variation in alternative splicing across human tissues
    • doi: 10.1186/gb-2004-5-10-r74
    • Yeo G, Holste D, Kreiman G, Burge CB. 2004. Variation in alternative splicing across human tissues. Genome Biol 5: R74. doi: 10.1186/gb-2004-5-10- r74.
    • (2004) Genome Biol , vol.5
    • Yeo, G.1    Holste, D.2    Kreiman, G.3    Burge, C.B.4
  • 72
    • 10844221615 scopus 로고    scopus 로고
    • Disruption of exonic splicing enhancer elements is the principal cause of exon skipping associated with seven nonsense or missense alleles of NF1
    • DOI 10.1002/humu.20103
    • Zatkova A, Messiaen L, Vandenbroucke I, Wieser R, Fonatsch C, Krainer AR, Wimmer K. 2004. Disruption of exonic splicing enhancer elements is the principal cause of exon skipping associated with seven nonsense or missense alleles of NF1. Hum Mutat 24: 491-501. (Pubitemid 39664603)
    • (2004) Human Mutation , vol.24 , Issue.6 , pp. 491-501
    • Zatkova, A.1    Messiaen, L.2    Vandenbroucke, I.3    Wieser, R.4    Fonatsch, C.5    Krainer, A.R.6    Wimmer, K.7
  • 73
    • 0035691667 scopus 로고    scopus 로고
    • Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins
    • DOI 10.1016/S1097-2765(01)00409-9
    • Zhu J, Mayeda A, Krainer AR. 2001. Exon identity established through differential antagonism between exonic splicing silencer-bound hnRNP A1 and enhancer-bound SR proteins. Mol Cell 8: 1351-1361. (Pubitemid 34086947)
    • (2001) Molecular Cell , vol.8 , Issue.6 , pp. 1351-1361
    • Zhu, J.1    Mayeda, A.2    Krainer, A.R.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.