-
1
-
-
77951640946
-
A method and server for predicting damaging missense mutations
-
Adzhubei IA, Schmidt S, Peshkin L, Ramensky VE, Gerasimova A, Bork P, Kondrashov AS, Sunyaev SR. 2010. A method and server for predicting damaging missense mutations. Nat Methods 7:248-249.
-
(2010)
Nat Methods
, vol.7
, pp. 248-249
-
-
Adzhubei, I.A.1
Schmidt, S.2
Peshkin, L.3
Ramensky, V.E.4
Gerasimova, A.5
Bork, P.6
Kondrashov, A.S.7
Sunyaev, S.R.8
-
2
-
-
65149103048
-
Constructing genomic maps of positive selection in humans: where do we go from here?
-
Akey JM. 2009. Constructing genomic maps of positive selection in humans: where do we go from here? Genome Res 19:711-722.
-
(2009)
Genome Res
, vol.19
, pp. 711-722
-
-
Akey, J.M.1
-
3
-
-
77956331627
-
Integrating common and rare genetic variation in diverse human populations
-
Altshuler DM, Gibbs RA, Peltonen L, Dermitzakis E, Schaffner SF, Yu F, Bonnen PE, de Bakker PI, Deloukas P, Gabriel SB, Gwilliam R, Hunt S, Inouye M, Jia X, Palotie A, Parkin M, Whittaker P, Chang K, Hawes A, Lewis LR, Ren Y, Wheeler D, Muzny DM, Barnes C, Darvishi K, Hurles M, Korn JM, Kristiansson K, Lee C, McCarrol SA, Nemesh J, Keinan A, Montgomery SB, Pollack S, Price AL, Soranzo N, Gonzaga-Jauregui C, Anttila V, Brodeur W, Daly MJ, Leslie S, McVean G, Moutsianas L, Nguyen H, Zhang Q, Ghori MJ, McGinnis R, McLaren W, Takeuchi F, Grossman SR, Shlyakhter I, Hostetter EB, Sabeti PC, Adebamowo CA, Foster MW, Gordon DR, Licinio J, Manca MC, Marshall PA, Matsuda I, Ngare D, Wang VO, Reddy D, Rotimi CN, Royal CD, Sharp RR, Zeng C, Brooks LD, McEwen JE. 2010. Integrating common and rare genetic variation in diverse human populations. Nature 467:52-58.
-
(2010)
Nature
, vol.467
, pp. 52-58
-
-
Altshuler, D.M.1
Gibbs, R.A.2
Peltonen, L.3
Dermitzakis, E.4
Schaffner, S.F.5
Yu, F.6
Bonnen, P.E.7
de Bakker, P.I.8
Deloukas, P.9
Gabriel, S.B.10
Gwilliam, R.11
Hunt, S.12
Inouye, M.13
Jia, X.14
Palotie, A.15
Parkin, M.16
Whittaker, P.17
Chang, K.18
Hawes, A.19
Lewis, L.R.20
Ren, Y.21
Wheeler, D.22
Muzny, D.M.23
Barnes, C.24
Darvishi, K.25
Hurles, M.26
Korn, J.M.27
Kristiansson, K.28
Lee, C.29
McCarrol, S.A.30
Nemesh, J.31
Keinan, A.32
Montgomery, S.B.33
Pollack, S.34
Price, A.L.35
Soranzo, N.36
Gonzaga-Jauregui, C.37
Anttila, V.38
Brodeur, W.39
Daly, M.J.40
Leslie, S.41
McVean, G.42
Moutsianas, L.43
Nguyen, H.44
Zhang, Q.45
Ghori, M.J.46
McGinnis, R.47
McLaren, W.48
Takeuchi, F.49
Grossman, S.R.50
Shlyakhter, I.51
Hostetter, E.B.52
Sabeti, P.C.53
Adebamowo, C.A.54
Foster, M.W.55
Gordon, D.R.56
Licinio, J.57
Manca, M.C.58
Marshall, P.A.59
Matsuda, I.60
Ngare, D.61
Wang, V.O.62
Reddy, D.63
Rotimi, C.N.64
Royal, C.D.65
Sharp, R.R.66
Zeng, C.67
Brooks, L.D.68
McEwen, J.E.69
more..
-
4
-
-
68249118173
-
Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense
-
Barreiro LB, Ben-Ali M, Quach H, Laval G, Patin E, Pickrell JK, Bouchier C, Tichit M, Neyrolles O, Gicquel B, Kidd JR, Kidd KK, Alcais A, Ragimbeau J, Pellegrini S, Abel L, Casanova JL, Quintana-Murci L. 2009. Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense. PLoS Genet 5:e1000562.
-
(2009)
PLoS Genet
, vol.5
-
-
Barreiro, L.B.1
Ben-Ali, M.2
Quach, H.3
Laval, G.4
Patin, E.5
Pickrell, J.K.6
Bouchier, C.7
Tichit, M.8
Neyrolles, O.9
Gicquel, B.10
Kidd, J.R.11
Kidd, K.K.12
Alcais, A.13
Ragimbeau, J.14
Pellegrini, S.15
Abel, L.16
Casanova, J.L.17
Quintana-Murci, L.18
-
5
-
-
39749136156
-
Natural selection has driven population differentiation in modern humans
-
Barreiro LB, Laval G, Quach H, Patin E, Quintana-Murci L. 2008. Natural selection has driven population differentiation in modern humans. Nat Genet 40:340-345.
-
(2008)
Nat Genet
, vol.40
, pp. 340-345
-
-
Barreiro, L.B.1
Laval, G.2
Quach, H.3
Patin, E.4
Quintana-Murci, L.5
-
6
-
-
72849122933
-
From evolutionary genetics to human immunology: how selection shapes host defence genes
-
Barreiro LB, Quintana-Murci L. 2010. From evolutionary genetics to human immunology: how selection shapes host defence genes. Nat Rev Genet 11:17-30.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 17-30
-
-
Barreiro, L.B.1
Quintana-Murci, L.2
-
7
-
-
13444269543
-
Haploview: analysis and visualization of LD and haplotype maps
-
Barrett JC, Fry B, Maller J, Daly MJ. 2005. Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21:263-265.
-
(2005)
Bioinformatics
, vol.21
, pp. 263-265
-
-
Barrett, J.C.1
Fry, B.2
Maller, J.3
Daly, M.J.4
-
8
-
-
27144539145
-
Natural selection on protein-coding genes in the human genome
-
Bustamante CD, Fledel-Alon A, Williamson S, Nielsen R, Hubisz MT, Glanowski S, Tanenbaum DM, White TJ, Sninsky JJ, Hernandez RD, Civello D, Adams MD, Cargill M, Clark AG. 2005. Natural selection on protein-coding genes in the human genome. Nature 437:1153-1157.
-
(2005)
Nature
, vol.437
, pp. 1153-1157
-
-
Bustamante, C.D.1
Fledel-Alon, A.2
Williamson, S.3
Nielsen, R.4
Hubisz, M.T.5
Glanowski, S.6
Tanenbaum, D.M.7
White, T.J.8
Sninsky, J.J.9
Hernandez, R.D.10
Civello, D.11
Adams, M.D.12
Cargill, M.13
Clark, A.G.14
-
9
-
-
0037041421
-
The cost of inbreeding in Arabidopsis
-
Bustamante CD, Nielsen R, Sawyer SA, Olsen KM, Purugganan MD, Hartl DL. 2002. The cost of inbreeding in Arabidopsis. Nature 416:531-534.
-
(2002)
Nature
, vol.416
, pp. 531-534
-
-
Bustamante, C.D.1
Nielsen, R.2
Sawyer, S.A.3
Olsen, K.M.4
Purugganan, M.D.5
Hartl, D.L.6
-
10
-
-
0037066430
-
A human genome diversity cell line panel
-
Cann HM, de Toma C, Cazes L, Legrand MF, Morel V, Piouffre L, Bodmer J, Bodmer WF, Bonne-Tamir B, Cambon-Thomsen A, Chen Z, Chu J, Carcassi C, Contu L, Du R, Excoffier L, Ferrara GB, Friedlaender JS, Groot H, Gurwitz D, Jenkins T, Herrera RJ, Huang X, Kidd J, Kidd KK, Langaney A, Lin AA, Mehdi SQ, Parham P, Piazza A, Pistillo MP, Qian Y, Shu Q, Xu J, Zhu S, Weber JL, Greely HT, Feldman MW, Thomas G, Dausset J, Cavalli-Sforza LL. 2002. A human genome diversity cell line panel. Science 296:261-262.
-
(2002)
Science
, vol.296
, pp. 261-262
-
-
Cann, H.M.1
de Toma, C.2
Cazes, L.3
Legrand, M.F.4
Morel, V.5
Piouffre, L.6
Bodmer, J.7
Bodmer, W.F.8
Bonne-Tamir, B.9
Cambon-Thomsen, A.10
Chen, Z.11
Chu, J.12
Carcassi, C.13
Contu, L.14
Du, R.15
Excoffier, L.16
Ferrara, G.B.17
Friedlaender, J.S.18
Groot, H.19
Gurwitz, D.20
Jenkins, T.21
Herrera, R.J.22
Huang, X.23
Kidd, J.24
Kidd, K.K.25
Langaney, A.26
Lin, A.A.27
Mehdi, S.Q.28
Parham, P.29
Piazza, A.30
Pistillo, M.P.31
Qian, Y.32
Shu, Q.33
Xu, J.34
Zhu, S.35
Weber, J.L.36
Greely, H.T.37
Feldman, M.W.38
Thomas, G.39
Dausset, J.40
Cavalli-Sforza, L.L.41
more..
-
11
-
-
0033987736
-
Mutation nomenclature extensions and suggestions to describe complex mutations: a discussion
-
den Dunnen JT, Antonarakis SE. 2000. Mutation nomenclature extensions and suggestions to describe complex mutations: a discussion. Hum Mutat 15:7-12.
-
(2000)
Hum Mutat
, vol.15
, pp. 7-12
-
-
den Dunnen, J.T.1
Antonarakis, S.E.2
-
12
-
-
33750935988
-
Population genetics models of common diseases
-
Di Rienzo A. 2006. Population genetics models of common diseases. Curr Opin Genet Dev 16:630-636.
-
(2006)
Curr Opin Genet Dev
, vol.16
, pp. 630-636
-
-
Di Rienzo, A.1
-
13
-
-
40849140975
-
Polymorphism of the interferon-gamma gene and risk of tuberculosis in a southeastern Chinese population
-
Ding S, Li L, Zhu X. 2008. Polymorphism of the interferon-gamma gene and risk of tuberculosis in a southeastern Chinese population. Hum Immunol 69:129-133.
-
(2008)
Hum Immunol
, vol.69
, pp. 129-133
-
-
Ding, S.1
Li, L.2
Zhu, X.3
-
14
-
-
4344648175
-
Clinical features of dominant and recessive interferon gamma receptor 1 deficiencies
-
Dorman SE, Picard C, Lammas D, Heyne K, van Dissel JT, Baretto R, Rosenzweig SD, Newport M, Levin M, Roesler J, Kumararatne D, Casanova JL, Holland SM. 2004. Clinical features of dominant and recessive interferon gamma receptor 1 deficiencies. Lancet 364:2113-2121.
-
(2004)
Lancet
, vol.364
, pp. 2113-2121
-
-
Dorman, S.E.1
Picard, C.2
Lammas, D.3
Heyne, K.4
van Dissel, J.T.5
Baretto, R.6
Rosenzweig, S.D.7
Newport, M.8
Levin, M.9
Roesler, J.10
Kumararatne, D.11
Casanova, J.L.12
Holland, S.M.13
-
15
-
-
84975742565
-
A map of human genome variation from population-scale sequencing
-
Durbin RM, Abecasis GR, Altshuler DL, Auton A, Brooks LD, Gibbs RA, Hurles ME, McVean GA. 2010. A map of human genome variation from population-scale sequencing. Nature 467:1061-1073.
-
(2010)
Nature
, vol.467
, pp. 1061-1073
-
-
Durbin, R.M.1
Abecasis, G.R.2
Altshuler, D.L.3
Auton, A.4
Brooks, L.D.5
Gibbs, R.A.6
Hurles, M.E.7
McVean, G.A.8
-
16
-
-
33645054288
-
Interferon-gamma gene (T874A and G2109A) polymorphisms are associated with microscopy-positive tuberculosis
-
Etokebe GE, Bulat-Kardum L, Johansen MS, Knezevic J, Balen S, Matakovic-Mileusnic N, Matanic D, Flego V, Pavelic J, Beg-Zec Z, Dembic Z. 2006. Interferon-gamma gene (T874A and G2109A) polymorphisms are associated with microscopy-positive tuberculosis. Scand J Immunol 63:136-141.
-
(2006)
Scand J Immunol
, vol.63
, pp. 136-141
-
-
Etokebe, G.E.1
Bulat-Kardum, L.2
Johansen, M.S.3
Knezevic, J.4
Balen, S.5
Matakovic-Mileusnic, N.6
Matanic, D.7
Flego, V.8
Pavelic, J.9
Beg-Zec, Z.10
Dembic, Z.11
-
17
-
-
85007110786
-
Arlequin (version 3.0): An integrated software package for population genetics data analysis
-
Excoffier L, Laval G, Schneider S. 2005. Arlequin (version 3.0): An integrated software package for population genetics data analysis. Evol Bioinform Online 1:47-50.
-
(2005)
Evol Bioinform Online
, vol.1
, pp. 47-50
-
-
Excoffier, L.1
Laval, G.2
Schneider, S.3
-
18
-
-
0026681074
-
Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data
-
Excoffier L, Smouse PE, Quattro JM. 1992. Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:479-491.
-
(1992)
Genetics
, vol.131
, pp. 479-491
-
-
Excoffier, L.1
Smouse, P.E.2
Quattro, J.M.3
-
19
-
-
33749600724
-
Inborn errors of IL-12/23-and IFN-gamma-mediated immunity: molecular, cellular, and clinical features
-
Filipe-Santos O, Bustamante J, Chapgier A, Vogt G, de Beaucoudrey L, Feinberg J, Jouanguy E, Boisson-Dupuis S, Fieschi C, Picard C, Casanova JL. 2006. Inborn errors of IL-12/23-and IFN-gamma-mediated immunity: molecular, cellular, and clinical features. Semin Immunol 18:347-361.
-
(2006)
Semin Immunol
, vol.18
, pp. 347-361
-
-
Filipe-Santos, O.1
Bustamante, J.2
Chapgier, A.3
Vogt, G.4
de Beaucoudrey, L.5
Feinberg, J.6
Jouanguy, E.7
Boisson-Dupuis, S.8
Fieschi, C.9
Picard, C.10
Casanova, J.L.11
-
20
-
-
35348983887
-
A second generation human haplotype map of over 3.1 million SNPs
-
and others.
-
Frazer KA, Ballinger DG, Cox DR, Hinds DA, Stuve LL, Gibbs RA, Belmont JW, Boudreau A, Hardenbol P, Leal SM, Pasternak S, Wheeler DA, and others. 2007. A second generation human haplotype map of over 3.1 million SNPs. Nature 449:851-861.
-
(2007)
Nature
, vol.449
, pp. 851-861
-
-
Frazer, K.A.1
Ballinger, D.G.2
Cox, D.R.3
Hinds, D.A.4
Stuve, L.L.5
Gibbs, R.A.6
Belmont, J.W.7
Boudreau, A.8
Hardenbol, P.9
Leal, S.M.10
Pasternak, S.11
Wheeler, D.A.12
-
21
-
-
0041886501
-
Natural selection on the olfactory receptor gene family in humans and chimpanzees
-
Gilad Y, Bustamante CD, Lancet D, Paabo S. 2003. Natural selection on the olfactory receptor gene family in humans and chimpanzees. Am J Hum Genet 73:489-501.
-
(2003)
Am J Hum Genet
, vol.73
, pp. 489-501
-
-
Gilad, Y.1
Bustamante, C.D.2
Lancet, D.3
Paabo, S.4
-
22
-
-
0028782096
-
Sampling theory for neutral alleles in a varying environment
-
Griffiths RC, Tavare S. 1994. Sampling theory for neutral alleles in a varying environment. Philos Trans R Soc Lond B Biol Sci 344:403-410.
-
(1994)
Philos Trans R Soc Lond B Biol Sci
, vol.344
, pp. 403-410
-
-
Griffiths, R.C.1
Tavare, S.2
-
23
-
-
79959524146
-
A haplotype map of the human genome
-
International-HapMap-Consortium
-
International-HapMap-Consortium 2005. A haplotype map of the human genome. Nature 437:1299-1320.
-
(2005)
Nature
, vol.437
, pp. 1299-1320
-
-
-
24
-
-
0026749316
-
Recombinant human interferon gamma therapy for osteopetrosis
-
Key Jr LL, Ries WL, Rodriguiz RM, Hatcher HC. 1992. Recombinant human interferon gamma therapy for osteopetrosis. J Pediatr 121:119-124.
-
(1992)
J Pediatr
, vol.121
, pp. 119-124
-
-
Key, L.L.1
Ries, W.L.2
Rodriguiz, R.M.3
Hatcher, H.C.4
-
25
-
-
0034575442
-
Methods to detect selection in populations with applications to the human
-
Kreitman M. 2000. Methods to detect selection in populations with applications to the human. Annu Rev Genomics Hum Genet 1:539-559.
-
(2000)
Annu Rev Genomics Hum Genet
, vol.1
, pp. 539-559
-
-
Kreitman, M.1
-
26
-
-
7244221627
-
SIMCOAL 2.0: a program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history
-
Laval G, Excoffier L. 2004. SIMCOAL 2.0: a program to simulate genomic diversity over large recombining regions in a subdivided population with a complex history. Bioinformatics 20:2485-2487.
-
(2004)
Bioinformatics
, vol.20
, pp. 2485-2487
-
-
Laval, G.1
Excoffier, L.2
-
27
-
-
77956419544
-
Formulating a historical and demographic model of recent human evolution based on resequencing data from noncoding regions
-
Laval G, Patin E, Barreiro LB, Quintana-Murci L. 2010. Formulating a historical and demographic model of recent human evolution based on resequencing data from noncoding regions. PLoS One 5:e10284.
-
(2010)
PLoS One
, vol.5
-
-
Laval, G.1
Patin, E.2
Barreiro, L.B.3
Quintana-Murci, L.4
-
28
-
-
39749181521
-
Worldwide human relationships inferred from genome-wide patterns of variation
-
Li JZ, Absher DM, Tang H, Southwick AM, Casto AM, Ramachandran S, Cann HM, Barsh GS, Feldman M, Cavalli-Sforza LL, Myers RM. 2008. Worldwide human relationships inferred from genome-wide patterns of variation. Science 319:1100-1104.
-
(2008)
Science
, vol.319
, pp. 1100-1104
-
-
Li, J.Z.1
Absher, D.M.2
Tang, H.3
Southwick, A.M.4
Casto, A.M.5
Ramachandran, S.6
Cann, H.M.7
Barsh, G.S.8
Feldman, M.9
Cavalli-Sforza, L.L.10
Myers, R.M.11
-
29
-
-
0345421272
-
Interferon-gamma and interleukin-10 gene polymorphisms in pulmonary tuberculosis
-
Lopez-Maderuelo D, Arnalich F, Serantes R, Gonzalez A, Codoceo R, Madero R, Vazquez JJ, Montiel C. 2003. Interferon-gamma and interleukin-10 gene polymorphisms in pulmonary tuberculosis. Am J Respir Crit Care Med 167:970-975.
-
(2003)
Am J Respir Crit Care Med
, vol.167
, pp. 970-975
-
-
Lopez-Maderuelo, D.1
Arnalich, F.2
Serantes, R.3
Gonzalez, A.4
Codoceo, R.5
Madero, R.6
Vazquez, J.J.7
Montiel, C.8
-
30
-
-
26844482093
-
A fine-scale map of recombination rates and hotspots across the human genome
-
Myers S, Bottolo L, Freeman C, McVean G, Donnelly P. 2005. A fine-scale map of recombination rates and hotspots across the human genome. Science 310:321-324.
-
(2005)
Science
, vol.310
, pp. 321-324
-
-
Myers, S.1
Bottolo, L.2
Freeman, C.3
McVean, G.4
Donnelly, P.5
-
31
-
-
35348988170
-
Recent and ongoing selection in the human genome
-
Nielsen R, Hellmann I, Hubisz M, Bustamante C, Clark AG. 2007. Recent and ongoing selection in the human genome. Nat Rev Genet 8:857-868.
-
(2007)
Nat Rev Genet
, vol.8
, pp. 857-868
-
-
Nielsen, R.1
Hellmann, I.2
Hubisz, M.3
Bustamante, C.4
Clark, A.G.5
-
32
-
-
9644262469
-
Interferons, interferon-like cytokines, and their receptors
-
Pestka S, Krause CD, Walter MR. 2004. Interferons, interferon-like cytokines, and their receptors. Immunol Rev 202:8-32.
-
(2004)
Immunol Rev
, vol.202
, pp. 8-32
-
-
Pestka, S.1
Krause, C.D.2
Walter, M.R.3
-
33
-
-
0032969945
-
In vitro production of IFN-gamma correlates with CA repeat polymorphism in the human IFN-gamma gene
-
Pravica V, Asderakis A, Perrey C, Hajeer A, Sinnott PJ, Hutchinson IV. 1999. In vitro production of IFN-gamma correlates with CA repeat polymorphism in the human IFN-gamma gene. Eur J Immunogenet 26:1-3.
-
(1999)
Eur J Immunogenet
, vol.26
, pp. 1-3
-
-
Pravica, V.1
Asderakis, A.2
Perrey, C.3
Hajeer, A.4
Sinnott, P.J.5
Hutchinson, I.V.6
-
34
-
-
0033787711
-
A single nucleotide polymorphism in the first intron of the human IFN-gamma gene: absolute correlation with a polymorphic CA microsatellite marker of high IFN-gamma production
-
Pravica V, Perrey C, Stevens A, Lee JH, Hutchinson IV. 2000. A single nucleotide polymorphism in the first intron of the human IFN-gamma gene: absolute correlation with a polymorphic CA microsatellite marker of high IFN-gamma production. Hum Immunol 61:863-866.
-
(2000)
Hum Immunol
, vol.61
, pp. 863-866
-
-
Pravica, V.1
Perrey, C.2
Stevens, A.3
Lee, J.H.4
Hutchinson, I.V.5
-
35
-
-
76749097550
-
The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation
-
Pritchard JK, Pickrell JK, Coop G. 2010. The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation. Curr Biol 20:R208-R215.
-
(2010)
Curr Biol
, vol.20
-
-
Pritchard, J.K.1
Pickrell, J.K.2
Coop, G.3
-
36
-
-
28644440530
-
The signature of positive selection on standing genetic variation
-
Przeworski M, Coop G, Wall JD. 2005. The signature of positive selection on standing genetic variation. Evolution 59:2312-2323.
-
(2005)
Evolution
, vol.59
, pp. 2312-2323
-
-
Przeworski, M.1
Coop, G.2
Wall, J.D.3
-
37
-
-
35548956882
-
Immunology in natura: clinical, epidemiological and evolutionary genetics of infectious diseases
-
Quintana-Murci L, Alcais A, Abel L, Casanova JL. 2007. Immunology in natura: clinical, epidemiological and evolutionary genetics of infectious diseases. Nat Immunol 8:1165-1171.
-
(2007)
Nat Immunol
, vol.8
, pp. 1165-1171
-
-
Quintana-Murci, L.1
Alcais, A.2
Abel, L.3
Casanova, J.L.4
-
38
-
-
0038054446
-
Association between tuberculosis and a polymorphic NFkappaB binding site in the interferon gamma gene
-
Rossouw M, Nel HJ, Cooke GS, van Helden PD, Hoal EG. 2003. Association between tuberculosis and a polymorphic NFkappaB binding site in the interferon gamma gene. Lancet 361:1871-1872.
-
(2003)
Lancet
, vol.361
, pp. 1871-1872
-
-
Rossouw, M.1
Nel, H.J.2
Cooke, G.S.3
van Helden, P.D.4
Hoal, E.G.5
-
39
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
Rozas J, Sanchez-DelBarrio JC, Messeguer X, Rozas R. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19:2496-2497.
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sanchez-DelBarrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
40
-
-
0037167852
-
Detecting recent positive selection in the human genome from haplotype structure
-
Sabeti PC, Reich DE, Higgins JM, Levine HZ, Richter DJ, Schaffner SF, Gabriel SB, Platko JV, Patterson NJ, McDonald GJ, Ackerman HC, Campbell SJ, Altshuler D, Cooper R, Kwiatkowski D, Ward R, Lander ES. 2002. Detecting recent positive selection in the human genome from haplotype structure. Nature 419:832-837.
-
(2002)
Nature
, vol.419
, pp. 832-837
-
-
Sabeti, P.C.1
Reich, D.E.2
Higgins, J.M.3
Levine, H.Z.4
Richter, D.J.5
Schaffner, S.F.6
Gabriel, S.B.7
Platko, J.V.8
Patterson, N.J.9
McDonald, G.J.10
Ackerman, H.C.11
Campbell, S.J.12
Altshuler, D.13
Cooper, R.14
Kwiatkowski, D.15
Ward, R.16
Lander, E.S.17
-
41
-
-
33745121154
-
Positive natural selection in the human lineage
-
Sabeti PC, Schaffner SF, Fry B, Lohmueller J, Varilly P, Shamovsky O, Palma A, Mikkelsen TS, Altshuler D, Lander ES. 2006. Positive natural selection in the human lineage. Science 312:1614-1620.
-
(2006)
Science
, vol.312
, pp. 1614-1620
-
-
Sabeti, P.C.1
Schaffner, S.F.2
Fry, B.3
Lohmueller, J.4
Varilly, P.5
Shamovsky, O.6
Palma, A.7
Mikkelsen, T.S.8
Altshuler, D.9
Lander, E.S.10
-
42
-
-
35349012592
-
Genome-wide detection and characterization of positive selection in human populations
-
and others.
-
Sabeti PC, Varilly P, Fry B, Lohmueller J, Hostetter E, Cotsapas C, Xie X, Byrne EH, McCarroll SA, Gaudet R, Schaffner SF, Lander ES, and others. 2007. Genome-wide detection and characterization of positive selection in human populations. Nature 449:913-918.
-
(2007)
Nature
, vol.449
, pp. 913-918
-
-
Sabeti, P.C.1
Varilly, P.2
Fry, B.3
Lohmueller, J.4
Hostetter, E.5
Cotsapas, C.6
Xie, X.7
Byrne, E.H.8
McCarroll, S.A.9
Gaudet, R.10
Schaffner, S.F.11
Lander, E.S.12
-
43
-
-
34047245791
-
Interferon-gamma gene + 874T-A polymorphism is associated with tuberculosis and gamma interferon response
-
Sallakci N, Coskun M, Berber Z, Gurkan F, Kocamaz H, Uysal G, Bhuju S, Yavuzer U, Singh M, Yegin O. 2007. Interferon-gamma gene + 874T-A polymorphism is associated with tuberculosis and gamma interferon response. Tuberculosis (Edinb) 87:225-230.
-
(2007)
Tuberculosis (Edinb)
, vol.87
, pp. 225-230
-
-
Sallakci, N.1
Coskun, M.2
Berber, Z.3
Gurkan, F.4
Kocamaz, H.5
Uysal, G.6
Bhuju, S.7
Yavuzer, U.8
Singh, M.9
Yegin, O.10
-
44
-
-
0026460082
-
Population genetics of polymorphism and divergence
-
Sawyer SA, Hartl DL. 1992. Population genetics of polymorphism and divergence. Genetics 132:1161-1176.
-
(1992)
Genetics
, vol.132
, pp. 1161-1176
-
-
Sawyer, S.A.1
Hartl, D.L.2
-
45
-
-
0842266786
-
Interferon-gamma: an overview of signals, mechanisms and functions
-
Schroder K, Hertzog PJ, Ravasi T, Hume DA. 2004. Interferon-gamma: an overview of signals, mechanisms and functions. J Leukoc Biol 75:163-189.
-
(2004)
J Leukoc Biol
, vol.75
, pp. 163-189
-
-
Schroder, K.1
Hertzog, P.J.2
Ravasi, T.3
Hume, D.A.4
-
46
-
-
0242691208
-
A comparison of bayesian methods for haplotype reconstruction from population genotype data
-
Stephens M, Donnelly P. 2003. A comparison of bayesian methods for haplotype reconstruction from population genotype data. Am J Hum Genet 73:1162-1169.
-
(2003)
Am J Hum Genet
, vol.73
, pp. 1162-1169
-
-
Stephens, M.1
Donnelly, P.2
-
47
-
-
11844257820
-
Automated identification of single nucleotide polymorphisms from sequencing data
-
Takahashi M, Matsuda F, Margetic N, Lathrop M. 2003. Automated identification of single nucleotide polymorphisms from sequencing data. J Bioinform Comput Biol 1:253-265.
-
(2003)
J Bioinform Comput Biol
, vol.1
, pp. 253-265
-
-
Takahashi, M.1
Matsuda, F.2
Margetic, N.3
Lathrop, M.4
-
48
-
-
0141742293
-
PANTHER: a library of protein families and subfamilies indexed by function
-
Thomas PD, Campbell MJ, Kejariwal A, Mi H, Karlak B, Daverman R, Diemer K, Muruganujan A, Narechania A. 2003. PANTHER: a library of protein families and subfamilies indexed by function. Genome Res 13:2129-2141.
-
(2003)
Genome Res
, vol.13
, pp. 2129-2141
-
-
Thomas, P.D.1
Campbell, M.J.2
Kejariwal, A.3
Mi, H.4
Karlak, B.5
Daverman, R.6
Diemer, K.7
Muruganujan, A.8
Narechania, A.9
-
49
-
-
0026527710
-
Interferon gamma-1b. A review of its pharmacology and therapeutic potential in chronic granulomatous disease
-
Todd PA, Goa KL. 1992. Interferon gamma-1b. A review of its pharmacology and therapeutic potential in chronic granulomatous disease. Drugs 43:111-122.
-
(1992)
Drugs
, vol.43
, pp. 111-122
-
-
Todd, P.A.1
Goa, K.L.2
-
50
-
-
21344443711
-
Association of interferon gamma and interleukin 10 genes with tuberculosis in Hong Kong Chinese
-
Tso HW, Ip WK, Chong WP, Tam CM, Chiang AK, Lau YL. 2005. Association of interferon gamma and interleukin 10 genes with tuberculosis in Hong Kong Chinese. Genes Immun 6:358-363.
-
(2005)
Genes Immun
, vol.6
, pp. 358-363
-
-
Tso, H.W.1
Ip, W.K.2
Chong, W.P.3
Tam, C.M.4
Chiang, A.K.5
Lau, Y.L.6
-
51
-
-
29444451610
-
Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes
-
Voight BF, Adams AM, Frisse LA, Qian Y, Hudson RR, Di Rienzo A. 2005. Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes. Proc Natl Acad Sci USA 102:18508-18513.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 18508-18513
-
-
Voight, B.F.1
Adams, A.M.2
Frisse, L.A.3
Qian, Y.4
Hudson, R.R.5
Di Rienzo, A.6
-
52
-
-
0032884643
-
Recombination and the power of statistical tests of neutrality
-
Wall JD. 1999. Recombination and the power of statistical tests of neutrality. Genet Res 74:65-79.
-
(1999)
Genet Res
, vol.74
, pp. 65-79
-
-
Wall, J.D.1
-
53
-
-
33750951625
-
Archaic admixture in the human genome
-
Wall JD, Hammer MF. 2006. Archaic admixture in the human genome. Curr Opin Genet Dev 16:606-610.
-
(2006)
Curr Opin Genet Dev
, vol.16
, pp. 606-610
-
-
Wall, J.D.1
Hammer, M.F.2
-
54
-
-
0021566877
-
Estimating F-statistics for the analysis of population structure
-
Weir BS. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38:1358-1370.
-
(1984)
Evolution
, vol.38
, pp. 1358-1370
-
-
Weir, B.S.1
-
55
-
-
20344380699
-
Simultaneous inference of selection and population growth from patterns of variation in the human genome
-
Williamson SH, Hernandez R, Fledel-Alon A, Zhu L, Nielsen R, Bustamante CD. 2005. Simultaneous inference of selection and population growth from patterns of variation in the human genome. Proc Natl Acad Sci USA 102:7882-7887.
-
(2005)
Proc Natl Acad Sci USA
, vol.102
, pp. 7882-7887
-
-
Williamson, S.H.1
Hernandez, R.2
Fledel-Alon, A.3
Zhu, L.4
Nielsen, R.5
Bustamante, C.D.6
-
56
-
-
33751342650
-
Statistical tests for detecting positive selection by utilizing high-frequency variants
-
Zeng K, Fu YX, Shi S, Wu CI. 2006. Statistical tests for detecting positive selection by utilizing high-frequency variants. Genetics 174:1431-1439.
-
(2006)
Genetics
, vol.174
, pp. 1431-1439
-
-
Zeng, K.1
Fu, Y.X.2
Shi, S.3
Wu, C.I.4
-
57
-
-
55149102403
-
Inborn errors of interferon (IFN)-mediated immunity in humans: insights into the respective roles of IFN-alpha/beta, IFN-gamma, and IFN-lambda in host defense
-
Zhang SY, Boisson-Dupuis S, Chapgier A, Yang K, Bustamante J, Puel A, Picard C, Abel L, Jouanguy E, Casanova JL. 2008. Inborn errors of interferon (IFN)-mediated immunity in humans: insights into the respective roles of IFN-alpha/beta, IFN-gamma, and IFN-lambda in host defense. Immunol Rev 226:29-40.
-
(2008)
Immunol Rev
, vol.226
, pp. 29-40
-
-
Zhang, S.Y.1
Boisson-Dupuis, S.2
Chapgier, A.3
Yang, K.4
Bustamante, J.5
Puel, A.6
Picard, C.7
Abel, L.8
Jouanguy, E.9
Casanova, J.L.10
-
58
-
-
34548699323
-
TLR3 deficiency in patients with herpes simplex encephalitis
-
Zhang SY, Jouanguy E, Ugolini S, Smahi A, Elain G, Romero P, Segal D, Sancho-Shimizu V, Lorenzo L, Puel A, Picard C, Chapgier A, Plancoulaine S, Titeux M, Cognet C, von Bernuth H, Ku CL, Casrouge A, Zhang XX, Barreiro L, Leonard J, Hamilton C, Lebon P, Heron B, Vallee L, Quintana-Murci L, Hovnanian A, Rozenberg F, Vivier E, Geissmann F, Tardieu M, Abel L, Casanova JL. 2007. TLR3 deficiency in patients with herpes simplex encephalitis. Science 317:1522-1527.
-
(2007)
Science
, vol.317
, pp. 1522-1527
-
-
Zhang, S.Y.1
Jouanguy, E.2
Ugolini, S.3
Smahi, A.4
Elain, G.5
Romero, P.6
Segal, D.7
Sancho-Shimizu, V.8
Lorenzo, L.9
Puel, A.10
Picard, C.11
Chapgier, A.12
Plancoulaine, S.13
Titeux, M.14
Cognet, C.15
von Bernuth, H.16
Ku, C.L.17
Casrouge, A.18
Zhang, X.X.19
Barreiro, L.20
Leonard, J.21
Hamilton, C.22
Lebon, P.23
Heron, B.24
Vallee, L.25
Quintana-Murci, L.26
Hovnanian, A.27
Rozenberg, F.28
Vivier, E.29
Geissmann, F.30
Tardieu, M.31
Abel, L.32
Casanova, J.L.33
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