-
1
-
-
0030801002
-
-
Altschul, S.F., Madden, T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Nucleic Acids Res., 25, 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
38549153238
-
-
Andreeva, A., Howorth, D., Chandonia, J.M., Brenner, S.E., Hubbard, T.J., Chothia, C. and Murzin, A.G. (2008) Nucleic Acids Res., 36, D419-D425.
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Andreeva, A.1
Howorth, D.2
Chandonia, J.M.3
Brenner, S.E.4
Hubbard, T.J.5
Chothia, C.6
Murzin, A.G.7
-
3
-
-
59849106575
-
-
Ashkenazy, H., Unger, R. and Kliger, Y. (2009) Proteins, 74, 545-555.
-
(2009)
Proteins
, vol.74
, pp. 545-555
-
-
Ashkenazy, H.1
Unger, R.2
Kliger, Y.3
-
4
-
-
0033977832
-
-
Atchley, W.R., Wollenberg, K.R., Fitch, W.M., Terhalle, W. and Dress, A.W. (2000) Mol. Biol. Evol., 17, 164-178.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 164-178
-
-
Atchley, W.R.1
Wollenberg, K.R.2
Fitch, W.M.3
Terhalle, W.4
Dress, A.W.5
-
5
-
-
0033954256
-
-
Berman, H.M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T.N., Weissig, H., Shindyalov, I.N. and Bourne, P.E. (2000) Nucleic Acids Res., 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
8
-
-
33748619206
-
-
Boehr, D.D., Dyson, H.J. and Wright, P.E. (2006) Chem. Rev., 106, 3055-3079.
-
(2006)
Chem. Rev.
, vol.106
, pp. 3055-3079
-
-
Boehr, D.D.1
Dyson, H.J.2
Wright, P.E.3
-
11
-
-
23144465987
-
-
Cheng, J., Randall, A.Z., Sweredoski, M.J. and Baldi, P. (2005) Nucleic Acids Res., 33, W72-W76.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Cheng, J.1
Randall, A.Z.2
Sweredoski, M.J.3
Baldi, P.4
-
12
-
-
28444463255
-
-
Choi, S.S., Li, W. and Lahn, B.T. (2005) Nat. Genet., 37, 1367-1371.
-
(2005)
Nat. Genet.
, vol.37
, pp. 1367-1371
-
-
Choi, S.S.1
Li, W.2
Lahn, B.T.3
-
14
-
-
0036780779
-
-
Cline, M.S., Karplus, K., Lathrop, R.H., Smith, T.F., Rogers, R.G., Jr and Haussler, D. (2002) Proteins, 49, 7-14.
-
(2002)
Proteins
, vol.49
, pp. 7-14
-
-
Cline, M.S.1
Karplus, K.2
Lathrop, R.H.3
Smith, T.F.4
Rogers Jr., R.G.5
Haussler, D.6
-
15
-
-
3543089710
-
-
Dekker, J.P., Fodor, A., Aldrich, R.W. and Yellen, G. (2004) Bioinformatics, 20, 1565-1572.
-
(2004)
Bioinformatics
, vol.20
, pp. 1565-1572
-
-
Dekker, J.P.1
Fodor, A.2
Aldrich, R.W.3
Yellen, G.4
-
16
-
-
23944490117
-
-
DePristo, M.A., Weinreich, D.M. and Hartl, D.L. (2005) Nat. Rev. Genet., 6, 678-687.
-
(2005)
Nat. Rev. Genet.
, vol.6
, pp. 678-687
-
-
De Pristo, M.A.1
Weinreich, D.M.2
Hartl, D.L.3
-
17
-
-
84860533518
-
-
Dimmic, M.W., Hubisz, M.J., Bustamante, C.D. and Nielsen, R. (2005) Bioinformatics, 21(Suppl. 1), i126-i135.
-
(2005)
Bioinformatics
, vol.21
, Issue.SUPPL. 1
-
-
Dimmic, M.W.1
Hubisz, M.J.2
Bustamante, C.D.3
Nielsen, R.4
-
18
-
-
38849115223
-
-
Dunn, S.D., Wahl, L.M. and Gloor, G.B. (2008) Bioinformatics, 24, 333-340.
-
(2008)
Bioinformatics
, vol.24
, pp. 333-340
-
-
Dunn, S.D.1
Wahl, L.M.2
Gloor, G.B.3
-
20
-
-
23944476399
-
-
Dutheil, J., Pupko, T., Jean-Marie, A. and Galtier, N. (2005) Mol. Biol. Evol., 22, 1919-1928.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 1919-1928
-
-
Dutheil, J.1
Pupko, T.2
Jean-Marie, A.3
Galtier, N.4
-
21
-
-
74249108517
-
-
Ezkurdia, I., Grana, O., Izarzugaza, J.M. and Tress, M.L. (2009) Proteins, 77 (Suppl 9), 196-209.
-
(2009)
Proteins
, vol.77
, Issue.SUPPL. 9
, pp. 196-209
-
-
Ezkurdia, I.1
Grana, O.2
Izarzugaza, J.M.3
Tress, M.L.4
-
22
-
-
0035700864
-
-
Fariselli, P., Olmea, O., Valencia, A. and Casadio, R. (2001) Proteins, 45 (Suppl. 5), 157-162.
-
(2001)
Proteins
, vol.45
, Issue.SUPPL. 5
, pp. 157-162
-
-
Fariselli, P.1
Olmea, O.2
Valencia, A.3
Casadio, R.4
-
23
-
-
2942580743
-
-
Fleishman, S.J., Yifrach, O. and Ben-Tal, N. (2004) J. Mol. Biol., 340, 307-318.
-
(2004)
J. Mol. Biol.
, vol.340
, pp. 307-318
-
-
Fleishman, S.J.1
Yifrach, O.2
Ben-Tal, N.3
-
25
-
-
34547757477
-
-
Frenkel-Morgenstern, M., Magid, R., Eyal, E. and Pietrokovski, S. (2007) BMC Bioinformatics, 8(Suppl. 5), S6.
-
(2007)
BMC Bioinformatics
, vol.8
, Issue.SUPPL. 5
-
-
Frenkel-Morgenstern, M.1
Magid, R.2
Eyal, E.3
Pietrokovski, S.4
-
26
-
-
36949003878
-
-
Fuchs, A., Martin-Galiano, A.J., Kalman, M., Fleishman, S., Ben-Tal, N. and Frishman, D. (2007) Bioinformatics, 23, 3312-3319.
-
(2007)
Bioinformatics
, vol.23
, pp. 3312-3319
-
-
Fuchs, A.1
Martin-Galiano, A.J.2
Kalman, M.3
Fleishman, S.4
Ben-Tal, N.5
Frishman, D.6
-
27
-
-
18544362952
-
-
Gloor, G.B., Martin, L.C., Wahl, L.M. and Dunn, S.D. (2005) Biochemistry, 44, 7156-7165.
-
(2005)
Biochemistry
, vol.44
, pp. 7156-7165
-
-
Gloor, G.B.1
Martin, L.C.2
Wahl, L.M.3
Dunn, S.D.4
-
28
-
-
0028295169
-
-
Gobel, U., Sander, C., Schneider, R. and Valencia, A. (1994) Proteins, 18, 309-317.
-
(1994)
Proteins
, vol.18
, pp. 309-317
-
-
Gobel, U.1
Sander, C.2
Schneider, R.3
Valencia, A.4
-
29
-
-
33646766064
-
-
Halperin, I., Wolfson, H. and Nussinov, R. (2006) Proteins, 63, 832-845.
-
(2006)
Proteins
, vol.63
, pp. 832-845
-
-
Halperin, I.1
Wolfson, H.2
Nussinov, R.3
-
31
-
-
38049186804
-
-
Horner, D.S., Pirovano, W. and Pesole, G. (2008) Brief Bioinform., 9, 46-56.
-
(2008)
Brief Bioinform.
, vol.9
, pp. 46-56
-
-
Horner, D.S.1
Pirovano, W.2
Pesole, G.3
-
32
-
-
36749082814
-
-
Izarzugaza, J.M., Grana, O., Tress, M.L., Valencia, A. and Clarke, N.D. (2007) Proteins, 69, 152-158.
-
(2007)
Proteins
, vol.69
, pp. 152-158
-
-
Izarzugaza, J.M.1
Grana, O.2
Tress, M.L.3
Valencia, A.4
Clarke, N.D.5
-
35
-
-
0037100671
-
-
Katoh, K., Misawa, K., Kuma, K. and Miyata, T. (2002) Nucleic Acids Res., 30, 3059-3066.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 3059-3066
-
-
Katoh, K.1
Misawa, K.2
Kuma, K.3
Miyata, T.4
-
36
-
-
13744252890
-
-
Katoh, K., Kuma, K., Toh, H. and Miyata, T. (2005) Nucleic Acids Res., 33, 511-518.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 511-518
-
-
Katoh, K.1
Kuma, K.2
Toh, H.3
Miyata, T.4
-
39
-
-
45849131354
-
-
Lange, O.F., Lakomek, N.A., Fares, C., Schroder, G.F., Walter, K.F., Becker, S., Meiler, J., Grubmuller, H., Griesinger, C. and de Groot, B.L. (2008) Science, 320, 1471-1475.
-
(2008)
Science
, vol.320
, pp. 1471-1475
-
-
Lange, O.F.1
Lakomek, N.A.2
Fares, C.3
Schroder, G.F.4
Walter, K.F.5
Becker, S.6
Meiler, J.7
Grubmuller, H.8
Griesinger, C.9
De Groot, B.L.10
-
41
-
-
27944458910
-
-
Martin, L.C., Gloor, G.B., Dunn, S.D. and Wahl, L.M. (2005) Bioinformatics, 21, 4116-4124.
-
(2005)
Bioinformatics
, vol.21
, pp. 4116-4124
-
-
Martin, L.C.1
Gloor, G.B.2
Dunn, S.D.3
Wahl, L.M.4
-
44
-
-
84995046262
-
-
Moult, J., Pedersen, J.T., Judson, R. and Fidelis, K. (1995) Proteins, 23, ii-v.
-
(1995)
Proteins
, vol.23
-
-
Moult, J.1
Pedersen, J.T.2
Judson, R.3
Fidelis, K.4
-
45
-
-
74249119329
-
-
Moult, J., Fidelis, K., Kryshtafovych, A., Rost, B. and Tramontano, A. (2009) Proteins, 77(Suppl. 9), 1-4.
-
(2009)
Proteins
, vol.77
, Issue.SUPPL. 9
, pp. 1-4
-
-
Moult, J.1
Fidelis, K.2
Kryshtafovych, A.3
Rost, B.4
Tramontano, A.5
-
47
-
-
20844452182
-
-
Noivirt, O., Eisenstein, M. and Horovitz, A. (2005) Protein Eng. Des. Sel., 18, 247-253.
-
(2005)
Protein Eng. Des. Sel.
, vol.18
, pp. 247-253
-
-
Noivirt, O.1
Eisenstein, M.2
Horovitz, A.3
-
48
-
-
65249121395
-
-
Noivirt-Brik, O., Unger, R. and Horovitz, A. (2009) BMC Struct. Biol., 9, 4.
-
(2009)
BMC Struct. Biol.
, vol.9
, pp. 4
-
-
Noivirt-Brik, O.1
Unger, R.2
Horovitz, A.3
-
50
-
-
0033550256
-
-
Olmea, O., Rost, B. and Valencia, A. (1999) J. Mol. Biol., 293, 1221-1239.
-
(1999)
J. Mol. Biol.
, vol.293
, pp. 1221-1239
-
-
Olmea, O.1
Rost, B.2
Valencia, A.3
-
51
-
-
0032613288
-
-
Ortiz, A.R., Kolinski, A., Rotkiewicz, P., Ilkowski, B. and Skolnick, J. (1999) Protein Struct. Funct. Genet., 37, 177-185.
-
(1999)
Protein Struct. Funct. Genet.
, vol.37
, pp. 177-185
-
-
Ortiz, A.R.1
Kolinski, A.2
Rotkiewicz, P.3
Ilkowski, B.4
Skolnick, J.5
-
52
-
-
0030927252
-
-
Pazos, F., Olmea, O. and Valencia, A. (1997) Comput. Appl. Biosci., 13, 319-321.
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 319-321
-
-
Pazos, F.1
Olmea, O.2
Valencia, A.3
-
53
-
-
32044455282
-
-
Perez-Jimenez, R., Godoy-Ruiz, R., Parody-Morreale, A., Ibarra-Molero, B. and Sanchez-Ruiz, J.M. (2006) Biophys. Chem., 119, 240-246.
-
(2006)
Biophys. Chem.
, vol.119
, pp. 240-246
-
-
Perez-Jimenez, R.1
Godoy-Ruiz, R.2
Parody-Morreale, A.3
Ibarra-Molero, B.4
Sanchez-Ruiz, J.M.5
-
57
-
-
13044272912
-
-
Sobolev, V., Sorokine, A., Prilusky, J., Abola, E.E. and Edelman, M. (1999) Bioinformatics, 15, 327-332.
-
(1999)
Bioinformatics
, vol.15
, pp. 327-332
-
-
Sobolev, V.1
Sorokine, A.2
Prilusky, J.3
Abola, E.E.4
Edelman, M.5
-
58
-
-
67849110005
-
-
Tegge, A.N., Wang, Z., Eickholt, J. and Cheng, J. (2009) Nucleic Acids Res., 37, W515-W518.
-
(2009)
Nucleic Acids Res.
, vol.37
-
-
Tegge, A.N.1
Wang, Z.2
Eickholt, J.3
Cheng, J.4
-
61
-
-
49249136837
-
-
Vassura, M., Margara, L., Di Lena, P., Medri, F., Fariselli, P. and Casadio, R. (2008) IEEE/ACM Trans. Comput. Biol. Bioinform., 5, 357-367.
-
(2008)
IEEE/ACM Trans. Comput. Biol. Bioinform.
, vol.5
, pp. 357-367
-
-
Vassura, M.1
Margara, L.2
Di Lena, P.3
Medri, F.4
Fariselli, P.5
Casadio, R.6
-
62
-
-
13944252115
-
-
Vicatos, S., Reddy, B.V. and Kaznessis, Y. (2005) Proteins, 58, 935-949.
-
(2005)
Proteins
, vol.58
, pp. 935-949
-
-
Vicatos, S.1
Reddy, B.V.2
Kaznessis, Y.3
|