Effectiveness of correlation analysis in identifying protein residues undergoing correlated evolution

Protein Engineering

Volumn 10, Issue 6, 1997, Pages 647-657

  Pollock, D D ^a   Taylor, W R ^a  

^a NATIONAL INSTITUTE FOR MEDICAL RESEARCH   (United Kingdom)

Author keywords

Compensatory change; Correlation; Evolution; Protein structure; Residue contacts

Indexed keywords

PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; EVOLUTION; PHYSICAL CHEMISTRY; PRIORITY JOURNAL;

EID: 0030743758     PISSN: 02692139     EISSN: None     Source Type: Journal    
DOI: 10.1093/protein/10.6.647     Document Type: Article

References (17)

1. Altschuh, D., Lesk, A., Bloomer, A.C. and Klug, A. (1987a) J. Cell. Biochem., S11e, 233.
2. Altschuh, D., Lesk, A.M., Bloomer, A.C. and Klug, A. (1987b) J. Mol. Biol., 193, 693-707.
3. Dayhoff, M.O., Schwartz, R.M. and Orcutt, B.C. (1978) In Dayhoff, M.O. (ed.), Atlas of Protein Sequence and Structure. National Biomedical Research Foundation, Washington, DC, Vol. 5, pp. 345-352.
4. Felsenstein, J. (1981) J. Mol. Evol., 17, 368-376.
5. Gobel, U., Sander, C., Schneider, R. and Valencia, A. (1994) Proteins: Struct. Funct. Genet., 18, 309-317.
6. Goldman, N., Thorne, J. and Jones, D. (1996) J. Mol. Biol., 263, 196-208.
7. Grantham, R. (1974) Science, 185, 862-864.
8. Hatrick, K. and Taylor, W.R. (1994) Comput. Chem., 18, 245-249.
9. Jones, D.T., Taylor, W.R. and Thornton, J.M. (1994) FEBS Lett., 339, 269-275.
10. Levitt, M. (1976) J. Mol. Biol., 104, 59-107.
11. McLachlan, A.D. (1971) J. Mol. Biol., 61, 409-424.
12. Neher, E. (1994) Proc. Natl Acad. Sci. USA, 91, 98-102.
13. Pagel, M. (1994) Proc. R. Soc. Lond. B, 255, 37-45.
14. Shindyalov, I.N., Kolchanov, N.A. and Sander, C. (1994) Protein Engng, 7, 349-358.
15. Sokal, R. (1990) Evolution, 44, 1671-1684.
16. Taylor, W.R. and Hatrick, K. (1994) Protein Engng, 7, 341-348.
17. Taylor, W.R. and Jones, D.T. (1993) J. Theor. Biol., 164, 65-83.