-
1
-
-
0028961335
-
SCOP: A structural classification of proteins database for the investigation of sequences and structures
-
Murzin, A.G., Brenner, S.E., Hubbard, T. and Chothia, C. (1995) SCOP: A structural classification of proteins database for the investigation of sequences and structures. J. Mol. Biol., 247, 536-540.
-
(1995)
J. Mol. Biol
, vol.247
, pp. 536-540
-
-
Murzin, A.G.1
Brenner, S.E.2
Hubbard, T.3
Chothia, C.4
-
2
-
-
0033954256
-
The Protein Data Bank
-
Berman, H.M., Westbrook, J., Feng, Z., Gilliland, G., Bhat, T.N., Weissig, H., Shindyalov, I.N. and Bourne, P.E. (2000) The Protein Data Bank. Nucleic Acids Res., 28, 235-242.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
3
-
-
0036084625
-
SCOP database in 2002: Refinements accommodate structural genomics
-
Lo Conte, L., Brenner, S.E., Hubbard, T.J.P., Chothia, C. and Murzin, A.G. (2002) SCOP database in 2002: Refinements accommodate structural genomics. Nucleic Acids Res., 30, 264-267.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 264-267
-
-
Lo Conte, L.1
Brenner, S.E.2
Hubbard, T.J.P.3
Chothia, C.4
Murzin, A.G.5
-
4
-
-
0348129526
-
The ASTRAL compendium in 2004
-
Chandonia J.-M., Hon, G., Walker, N.S., Lo Conte, L., Koehl, P., Levitt, M. and Brenner, S.E. (2004) The ASTRAL compendium in 2004. Nucleic Acids Res., 32, D189-D192.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Chandonia, J.-M.1
Hon, G.2
Walker, N.S.3
Lo Conte, L.4
Koehl, P.5
Levitt, M.6
Brenner, S.E.7
-
5
-
-
33846044585
-
The SUPERFAMILY database in 2007: Families and functions
-
Wilson, D., Madera, M., Vogel, C., Chothia, C. and Gough, J. (2007) The SUPERFAMILY database in 2007: Families and functions. Nucleic Acids, Res., 35, D308-D313.
-
(2007)
Nucleic Acids, Res
, vol.35
-
-
Wilson, D.1
Madera, M.2
Vogel, C.3
Chothia, C.4
Gough, J.5
-
6
-
-
31144467558
-
The impact of Structural Genomics: Expectations and outcomes
-
Chandonia, J.-M. and Brenner, S.E. (2006) The impact of Structural Genomics: Expectations and outcomes. Science, 311, 347-351.
-
(2006)
Science
, vol.311
, pp. 347-351
-
-
Chandonia, J.-M.1
Brenner, S.E.2
-
7
-
-
33847616971
-
Growth of novel protein structural data
-
Levitt, M. (2007) Growth of novel protein structural data. Proc: Natl Acad. Sci. USA, 104, 3183-3188.
-
(2007)
Proc: Natl Acad. Sci. USA
, vol.104
, pp. 3183-3188
-
-
Levitt, M.1
-
8
-
-
33744783371
-
Evolution of protein fold in the presence of functional constraints
-
Andreeva, A. and Murzin, A.G. (2006) Evolution of protein fold in the presence of functional constraints. Curr. Opin. Struct. Biol., 16, 399-408.
-
(2006)
Curr. Opin. Struct. Biol
, vol.16
, pp. 399-408
-
-
Andreeva, A.1
Murzin, A.G.2
-
9
-
-
33846074754
-
SISYPHUS - structural alignments for proteins with non-trivial relationships
-
Andreeva, A., Prlic, A., Hubbard, T.J.P. and Murzin, A.G. (2007) SISYPHUS - structural alignments for proteins with non-trivial relationships. Nucleic Acids Res., 35, D253-D259.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Andreeva, A.1
Prlic, A.2
Hubbard, T.J.P.3
Murzin, A.G.4
-
10
-
-
0346494941
-
SCOP database in 2004: Refinements integrate structure and sequence family-data
-
Andreeva, A., Howorth, D., Brenner, S.E., Hubbard, T.J.P., Chothia, C. and Murzin, A.G. (2004) SCOP database in 2004: Refinements integrate structure and sequence family-data. Nucleic Acids Res., 32, D226-D229.
-
(2004)
Nucleic Acids Res
, vol.32
-
-
Andreeva, A.1
Howorth, D.2
Brenner, S.E.3
Hubbard, T.J.P.4
Chothia, C.5
Murzin, A.G.6
-
11
-
-
0030801002
-
Gapped BLAST and PSIBLAST: A new generation of protein database search programs
-
Altschul, S.F., Madden. T.L., Schaffer, A.A., Zhang, J., Zhang, Z., Miller, W. and Lipman, D.J. (1997) Gapped BLAST and PSIBLAST: A new generation of protein database search programs. Nucleic Acids Res. 25, 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
12
-
-
38549159030
-
-
Nocek, B., Xu, X., Savchenko, A., Edwards, A. and Joachimiak, A. (2007) PDB ID: 2P06 Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304, 10.2210/pdb2p06/pdb.
-
Nocek, B., Xu, X., Savchenko, A., Edwards, A. and Joachimiak, A. (2007) PDB ID: 2P06 Crystal structure of a predicted coding region AF_0060 from Archaeoglobus fulgidus DSM 4304, 10.2210/pdb2p06/pdb.
-
-
-
-
13
-
-
14644444463
-
Dimeric dUTPases, HisE, and MazG belong to a new superfamily of all-α NTP pyrophosphohydrolases with potential "house-cleaning" functions
-
Moroz, O.V., Murzin, A.G., Makarova, K.S., Koonin, E.V., Wilson, K.S. and Galperin, M.Y. (2005) Dimeric dUTPases, HisE, and MazG belong to a new superfamily of all-α NTP pyrophosphohydrolases with potential "house-cleaning" functions. J. Mol. Biol., 347, 243-255
-
(2005)
J. Mol. Biol
, vol.347
, pp. 243-255
-
-
Moroz, O.V.1
Murzin, A.G.2
Makarova, K.S.3
Koonin, E.V.4
Wilson, K.S.5
Galperin, M.Y.6
-
14
-
-
0033957466
-
Database resources of the national center for biotechnology information
-
Wheeler, D.L., Chappey, C., Lash, A.E., Leipe, D.D., Madden, T.L., Schuler, G.D., Tatusova, T.A. and Rapp, B.A. (2000) Database resources of the national center for biotechnology information. Nucleic Acids Res., 28, 10-14.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 10-14
-
-
Wheeler, D.L.1
Chappey, C.2
Lash, A.E.3
Leipe, D.D.4
Madden, T.L.5
Schuler, G.D.6
Tatusova, T.A.7
Rapp, B.A.8
-
15
-
-
33644876020
-
Pfam: Clans, web tools and services
-
Finn, R.D., Mistry, J., Schuster-Böckler, B., Griffiths-Jones, S., Hollich, V., Lassmann, T., Moxon, S., Marshall, M. and Khanna, A. (2006) Pfam: Clans, web tools and services. Nucleic Acids Res., 34, D247-D251.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Finn, R.D.1
Mistry, J.2
Schuster-Böckler, B.3
Griffiths-Jones, S.4
Hollich, V.5
Lassmann, T.6
Moxon, S.7
Marshall, M.8
Khanna, A.9
-
16
-
-
33846041078
-
The universal protein resource (UniProt)
-
The UniProt Consortium
-
The UniProt Consortium (2007) The universal protein resource (UniProt). Nucleic Acids Res., 35, D193-D197.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
-
17
-
-
38549118435
-
-
Dong, A., Xu, X., Liu, Y., Zhang, R., Savchenko, A. and Edwards, A. (2004) PDB ID: IT1J. Crystal Structure of Conserved Hypothetical Protein PA1492 from Pseudomonas aeruginosa, 10.2210/pdbltlj/pdb.
-
Dong, A., Xu, X., Liu, Y., Zhang, R., Savchenko, A. and Edwards, A. (2004) PDB ID: IT1J. Crystal Structure of Conserved Hypothetical Protein PA1492 from Pseudomonas aeruginosa, 10.2210/pdbltlj/pdb.
-
-
-
-
18
-
-
33947235074
-
The Sorcerer II global ocean sampling expedition: Expanding the -universe of protein families
-
Yooseph, S., Sutton, G., Rusch, D.B., Halpern, A.L., Williamson, S.J., Remington, K., Eisen, J.A., Heidelberg, K.B., Manning, G. et al. (2007) The Sorcerer II global ocean sampling expedition: Expanding the -universe of protein families. PLoS Biol., 5, e16.
-
(2007)
PLoS Biol
, vol.5
-
-
Yooseph, S.1
Sutton, G.2
Rusch, D.B.3
Halpern, A.L.4
Williamson, S.J.5
Remington, K.6
Eisen, J.A.7
Heidelberg, K.B.8
Manning, G.9
|