-
1
-
-
0000536073
-
On the mechanism of the development of multiple-drug-resistant clones of Shigella
-
Akiba T., Koyama K., Ishiki Y., Kimura S., and Fukushima T. On the mechanism of the development of multiple-drug-resistant clones of Shigella. Jpn J Microbiol 4 (1960) 219-227
-
(1960)
Jpn J Microbiol
, vol.4
, pp. 219-227
-
-
Akiba, T.1
Koyama, K.2
Ishiki, Y.3
Kimura, S.4
Fukushima, T.5
-
2
-
-
0033603539
-
Phylogenetic classification and the universal tree
-
Doolittle W.F. Phylogenetic classification and the universal tree. Science 284 (1999) 2124-2129
-
(1999)
Science
, vol.284
, pp. 2124-2129
-
-
Doolittle, W.F.1
-
3
-
-
0242490943
-
Lateral gene transfer: when will adolescence end?
-
Lawrence J.G., and Hendrickson H. Lateral gene transfer: when will adolescence end?. Mol Microbiol 50 (2003) 739-749
-
(2003)
Mol Microbiol
, vol.50
, pp. 739-749
-
-
Lawrence, J.G.1
Hendrickson, H.2
-
4
-
-
0036598066
-
Gene transfer in bacteria: speciation without species?
-
Lawrence J.G. Gene transfer in bacteria: speciation without species?. Theor Popul Biol 61 (2002) 449-460
-
(2002)
Theor Popul Biol
, vol.61
, pp. 449-460
-
-
Lawrence, J.G.1
-
5
-
-
21144441817
-
Lateral gene transfer in eukaryotes
-
Andersson J.O. Lateral gene transfer in eukaryotes. Cell Mol Life Sci 62 (2005) 1182-1197
-
(2005)
Cell Mol Life Sci
, vol.62
, pp. 1182-1197
-
-
Andersson, J.O.1
-
6
-
-
0037838657
-
Horizontal gene transfer and the evolution of parasitic protozoa
-
Richards T.A., Hirt R.P., Williams B.A., and Embley T.M. Horizontal gene transfer and the evolution of parasitic protozoa. Protist 154 (2003) 17-32
-
(2003)
Protist
, vol.154
, pp. 17-32
-
-
Richards, T.A.1
Hirt, R.P.2
Williams, B.A.3
Embley, T.M.4
-
7
-
-
47649104484
-
Horizontal gene transfer in eukaryotic evolution
-
A recent review of HGT to eukaryotes in general, including the effects of endosymbiosis.
-
Keeling P.J., and Palmer J.D. Horizontal gene transfer in eukaryotic evolution. Nat Rev Genet 9 (2008) 605-618. A recent review of HGT to eukaryotes in general, including the effects of endosymbiosis.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 605-618
-
-
Keeling, P.J.1
Palmer, J.D.2
-
8
-
-
0038714278
-
Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans
-
Archibald J.M., Rogers M.B., Toop M., Ishida K., and Keeling P.J. Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans. Proc Natl Acad Sci U S A 100 (2003) 7678-7683
-
(2003)
Proc Natl Acad Sci U S A
, vol.100
, pp. 7678-7683
-
-
Archibald, J.M.1
Rogers, M.B.2
Toop, M.3
Ishida, K.4
Keeling, P.J.5
-
9
-
-
11144228905
-
Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella
-
Bergthorsson U., Richardson A.O., Young G.J., Goertzen L.R., and Palmer J.D. Massive horizontal transfer of mitochondrial genes from diverse land plant donors to the basal angiosperm Amborella. Proc Natl Acad Sci U S A 101 (2004) 17747-17752
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 17747-17752
-
-
Bergthorsson, U.1
Richardson, A.O.2
Young, G.J.3
Goertzen, L.R.4
Palmer, J.D.5
-
10
-
-
14544294428
-
The genome of the protist parasite Entamoeba histolytica
-
Loftus B., Anderson I., Davies R., Alsmark U.C., Samuelson J., Amedeo P., Roncaglia P., Berriman M., Hirt R.P., Mann B.J., et al. The genome of the protist parasite Entamoeba histolytica. Nature 433 (2005) 865-868
-
(2005)
Nature
, vol.433
, pp. 865-868
-
-
Loftus, B.1
Anderson, I.2
Davies, R.3
Alsmark, U.C.4
Samuelson, J.5
Amedeo, P.6
Roncaglia, P.7
Berriman, M.8
Hirt, R.P.9
Mann, B.J.10
-
11
-
-
33845904639
-
Horizontal gene transfer in plants
-
Richardson A.O., and Palmer J.D. Horizontal gene transfer in plants. J Exp Bot 58 (2007) 1-9
-
(2007)
J Exp Bot
, vol.58
, pp. 1-9
-
-
Richardson, A.O.1
Palmer, J.D.2
-
12
-
-
22244441812
-
The genome of the African trypanosome Trypanosoma brucei
-
Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C., Lennard N.J., Caler E., Hamlin N.E., Haas B., et al. The genome of the African trypanosome Trypanosoma brucei. Science 309 (2005) 416-422
-
(2005)
Science
, vol.309
, pp. 416-422
-
-
Berriman, M.1
Ghedin, E.2
Hertz-Fowler, C.3
Blandin, G.4
Renauld, H.5
Bartholomeu, D.C.6
Lennard, N.J.7
Caler, E.8
Hamlin, N.E.9
Haas, B.10
-
13
-
-
18344395923
-
The genome of the social amoeba Dictyostelium discoideum
-
Eichinger L., Pachebat J.A., Glockner G., Rajandream M.A., Sucgang R., Berriman M., Song J., Olsen R., Szafranski K., Xu Q., et al. The genome of the social amoeba Dictyostelium discoideum. Nature 435 (2005) 43-57
-
(2005)
Nature
, vol.435
, pp. 43-57
-
-
Eichinger, L.1
Pachebat, J.A.2
Glockner, G.3
Rajandream, M.A.4
Sucgang, R.5
Berriman, M.6
Song, J.7
Olsen, R.8
Szafranski, K.9
Xu, Q.10
-
14
-
-
0033616714
-
Horizontal gene transfer among genomes: the complexity hypothesis
-
Jain R., Rivera M.C., and Lake J.A. Horizontal gene transfer among genomes: the complexity hypothesis. Proc Natl Acad Sci U S A 96 (1999) 3801-3806
-
(1999)
Proc Natl Acad Sci U S A
, vol.96
, pp. 3801-3806
-
-
Jain, R.1
Rivera, M.C.2
Lake, J.A.3
-
15
-
-
7444263971
-
A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1alpha
-
Keeling P.J., and Inagaki Y. A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1alpha. Proc Natl Acad Sci U S A 101 (2004) 15380-15385
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 15380-15385
-
-
Keeling, P.J.1
Inagaki, Y.2
-
16
-
-
65249125791
-
Distribution and phylogeny of EFL and EF-1alpha in Euglenozoa suggest ancestral co-occurrence followed by differential loss
-
Gile G.H., Faktorova D., Castlejohn C.A., Burger G., Lang B.F., Farmer M.A., Lukes J., and Keeling P.J. Distribution and phylogeny of EFL and EF-1alpha in Euglenozoa suggest ancestral co-occurrence followed by differential loss. PLoS ONE 4 (2009) e5162
-
(2009)
PLoS ONE
, vol.4
-
-
Gile, G.H.1
Faktorova, D.2
Castlejohn, C.A.3
Burger, G.4
Lang, B.F.5
Farmer, M.A.6
Lukes, J.7
Keeling, P.J.8
-
17
-
-
41549115479
-
Intergeneric transfer of ribosomal genes between two fungi
-
Xie J., Fu Y., Jiang D., Li G., Huang J., Li B., Hsiang T., and Peng Y. Intergeneric transfer of ribosomal genes between two fungi. BMC Evol Biol 8 (2008) 87
-
(2008)
BMC Evol Biol
, vol.8
, pp. 87
-
-
Xie, J.1
Fu, Y.2
Jiang, D.3
Li, G.4
Huang, J.5
Li, B.6
Hsiang, T.7
Peng, Y.8
-
18
-
-
49949083546
-
Lateral transfer of a lectin-like antifreeze protein gene in fishes
-
A rare case of HGT in vertebrates, in this case between different fish. The authors describe a patchy distribution of antifreeze proteins that, together with the phylogeny of the enzyme, suggests the gene has been moved between distantly related cold-water fish species.
-
Graham L.A., Lougheed S.C., Ewart K.V., and Davies P.L. Lateral transfer of a lectin-like antifreeze protein gene in fishes. PLoS ONE 3 (2008) e2616. A rare case of HGT in vertebrates, in this case between different fish. The authors describe a patchy distribution of antifreeze proteins that, together with the phylogeny of the enzyme, suggests the gene has been moved between distantly related cold-water fish species.
-
(2008)
PLoS ONE
, vol.3
-
-
Graham, L.A.1
Lougheed, S.C.2
Ewart, K.V.3
Davies, P.L.4
-
19
-
-
54249153313
-
A new divergent type of eukaryotic methionine adenosyltransferase is present in multiple distantly related secondary algal lineages
-
Sanchez-Perez G.F., Hampl V., Simpson A.G., and Roger A.J. A new divergent type of eukaryotic methionine adenosyltransferase is present in multiple distantly related secondary algal lineages. J Eukaryot Microbiol 55 (2008) 374-381
-
(2008)
J Eukaryot Microbiol
, vol.55
, pp. 374-381
-
-
Sanchez-Perez, G.F.1
Hampl, V.2
Simpson, A.G.3
Roger, A.J.4
-
20
-
-
34447509748
-
A complex and punctate distribution of three eukaryotic genes derived by lateral gene transfer
-
An illustration of how complex cases that appear to be serial transfer events can at first look like simple HGT from bacteria to eukaryotes.
-
Rogers M.B., Watkins R.F., Harper J.T., Durnford D.G., Gray M.W., and Keeling P.J. A complex and punctate distribution of three eukaryotic genes derived by lateral gene transfer. BMC Evol Biol 7 (2007) 89. An illustration of how complex cases that appear to be serial transfer events can at first look like simple HGT from bacteria to eukaryotes.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 89
-
-
Rogers, M.B.1
Watkins, R.F.2
Harper, J.T.3
Durnford, D.G.4
Gray, M.W.5
Keeling, P.J.6
-
21
-
-
41549141861
-
Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study
-
Acquiring whole biochemical pathways would be more beneficial than many individual genes, and in this paper such a transfer is described in fungi.
-
Slot J.C., and Hibbett D.S. Horizontal transfer of a nitrate assimilation gene cluster and ecological transitions in fungi: a phylogenetic study. PLoS ONE 2 (2007) e1097. Acquiring whole biochemical pathways would be more beneficial than many individual genes, and in this paper such a transfer is described in fungi.
-
(2007)
PLoS ONE
, vol.2
-
-
Slot, J.C.1
Hibbett, D.S.2
-
22
-
-
33847664257
-
A genomic survey of the fish parasite Spironucleus salmonicida indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evolution
-
Andersson J.O., Sjogren A.M., Horner D.S., Murphy C.A., Dyal P.L., Svard S.G., Logsdon Jr. J.M., Ragan M.A., Hirt R.P., and Roger A.J. A genomic survey of the fish parasite Spironucleus salmonicida indicates genomic plasticity among diplomonads and significant lateral gene transfer in eukaryote genome evolution. BMC Genomics 8 (2007) 51
-
(2007)
BMC Genomics
, vol.8
, pp. 51
-
-
Andersson, J.O.1
Sjogren, A.M.2
Horner, D.S.3
Murphy, C.A.4
Dyal, P.L.5
Svard, S.G.6
Logsdon Jr., J.M.7
Ragan, M.A.8
Hirt, R.P.9
Roger, A.J.10
-
23
-
-
33748455342
-
Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms
-
Richards T.A., Dacks J.B., Jenkinson J.M., Thornton C.R., and Talbot N.J. Evolution of filamentous plant pathogens: gene exchange across eukaryotic kingdoms. Curr Biol 16 (2006) 1857-1864
-
(2006)
Curr Biol
, vol.16
, pp. 1857-1864
-
-
Richards, T.A.1
Dacks, J.B.2
Jenkinson, J.M.3
Thornton, C.R.4
Talbot, N.J.5
-
24
-
-
33748857142
-
Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements
-
Richards T.A., Dacks J.B., Campbell S.A., Blanchard J.L., Foster P.G., McLeod R., and Roberts C.W. Evolutionary origins of the eukaryotic shikimate pathway: gene fusions, horizontal gene transfer, and endosymbiotic replacements. Eukaryot Cell 5 (2006) 1517-1531
-
(2006)
Eukaryot Cell
, vol.5
, pp. 1517-1531
-
-
Richards, T.A.1
Dacks, J.B.2
Campbell, S.A.3
Blanchard, J.L.4
Foster, P.G.5
McLeod, R.6
Roberts, C.W.7
-
25
-
-
33746576136
-
Emergence of a new disease as a result of interspecific virulence gene transfer
-
Friesen T.L., Stukenbrock E.H., Liu Z., Meinhardt S., Ling H., Faris J.D., Rasmussen J.B., Solomon P.S., McDonald B.A., and Oliver R.P. Emergence of a new disease as a result of interspecific virulence gene transfer. Nat Genet 38 (2006) 953-956
-
(2006)
Nat Genet
, vol.38
, pp. 953-956
-
-
Friesen, T.L.1
Stukenbrock, E.H.2
Liu, Z.3
Meinhardt, S.4
Ling, H.5
Faris, J.D.6
Rasmussen, J.B.7
Solomon, P.S.8
McDonald, B.A.9
Oliver, R.P.10
-
27
-
-
54049133380
-
Adaptive eukaryote-to-eukaryote lateral gene transfer: stress-related genes of algal origin in the closest unicellular relatives of animals
-
Nedelcu A.M., Miles I.H., Fagir A.M., and Karol K. Adaptive eukaryote-to-eukaryote lateral gene transfer: stress-related genes of algal origin in the closest unicellular relatives of animals. J Evol Biol 21 (2008) 1852-1860
-
(2008)
J Evol Biol
, vol.21
, pp. 1852-1860
-
-
Nedelcu, A.M.1
Miles, I.H.2
Fagir, A.M.3
Karol, K.4
-
28
-
-
41049109535
-
Lateral transfer of the gene for a widely used marker, alpha-tubulin, indicated by a multi-protein study of the phylogenetic position of Andalucia (Excavata)
-
Simpson A.G., Perley T.A., and Lara E. Lateral transfer of the gene for a widely used marker, alpha-tubulin, indicated by a multi-protein study of the phylogenetic position of Andalucia (Excavata). Mol Phylogenet Evol 47 (2008) 366-377
-
(2008)
Mol Phylogenet Evol
, vol.47
, pp. 366-377
-
-
Simpson, A.G.1
Perley, T.A.2
Lara, E.3
-
29
-
-
1242265736
-
Migration of the plastid genome to the nucleus in a peridinin dinoflagellate
-
Hackett J.D., Yoon H.S., Soares M.B., Bonaldo M.F., Casavant T.L., Scheetz T.E., Nosenko T., and Bhattacharya D. Migration of the plastid genome to the nucleus in a peridinin dinoflagellate. Curr Biol 14 (2004) 213-218
-
(2004)
Curr Biol
, vol.14
, pp. 213-218
-
-
Hackett, J.D.1
Yoon, H.S.2
Soares, M.B.3
Bonaldo, M.F.4
Casavant, T.L.5
Scheetz, T.E.6
Nosenko, T.7
Bhattacharya, D.8
-
30
-
-
0033609333
-
Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima
-
Nelson K.E., Clayton R.A., Gill S.R., Gwinn M.L., Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Nelson W.C., Ketchum K.A., et al. Evidence for lateral gene transfer between Archaea and bacteria from genome sequence of Thermotoga maritima. Nature 399 (1999) 323-329
-
(1999)
Nature
, vol.399
, pp. 323-329
-
-
Nelson, K.E.1
Clayton, R.A.2
Gill, S.R.3
Gwinn, M.L.4
Dodson, R.J.5
Haft, D.H.6
Hickey, E.K.7
Peterson, J.D.8
Nelson, W.C.9
Ketchum, K.A.10
-
31
-
-
65249126970
-
On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales
-
Zhaxybayeva O., Swithers K.S., Lapierre P., Fournier G.P., Bickhart D.M., DeBoy R.T., Nelson K.E., Nesbo C.L., Doolittle W.F., Gogarten J.P., et al. On the chimeric nature, thermophilic origin, and phylogenetic placement of the Thermotogales. Proc Natl Acad Sci U S A 106 (2009) 5865-5870
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 5865-5870
-
-
Zhaxybayeva, O.1
Swithers, K.S.2
Lapierre, P.3
Fournier, G.P.4
Bickhart, D.M.5
DeBoy, R.T.6
Nelson, K.E.7
Nesbo, C.L.8
Doolittle, W.F.9
Gogarten, J.P.10
-
32
-
-
33846528971
-
Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis
-
Carlton J.M., Hirt R.P., Silva J.C., Delcher A.L., Schatz M., Zhao Q., Wortman J.R., Bidwell S.L., Alsmark U.C., Besteiro S., et al. Draft genome sequence of the sexually transmitted pathogen Trichomonas vaginalis. Science 315 (2007) 207-212
-
(2007)
Science
, vol.315
, pp. 207-212
-
-
Carlton, J.M.1
Hirt, R.P.2
Silva, J.C.3
Delcher, A.L.4
Schatz, M.5
Zhao, Q.6
Wortman, J.R.7
Bidwell, S.L.8
Alsmark, U.C.9
Besteiro, S.10
-
33
-
-
34848894621
-
Genomic minimalism in the early diverging intestinal parasite Giardia lamblia
-
Morrison H.G., McArthur A.G., Gillin F.D., Aley S.B., Adam R.D., Olsen G.J., Best A.A., Cande W.Z., Chen F., Cipriano M.J., et al. Genomic minimalism in the early diverging intestinal parasite Giardia lamblia. Science 317 (2007) 1921-1926
-
(2007)
Science
, vol.317
, pp. 1921-1926
-
-
Morrison, H.G.1
McArthur, A.G.2
Gillin, F.D.3
Aley, S.B.4
Adam, R.D.5
Olsen, G.J.6
Best, A.A.7
Cande, W.Z.8
Chen, F.9
Cipriano, M.J.10
-
34
-
-
33645295532
-
Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment
-
Ricard G., McEwan N.R., Dutilh B.E., Jouany J.P., Macheboeuf D., Mitsumori M., McIntosh F.M., Michalowski T., Nagamine T., Nelson N., et al. Horizontal gene transfer from Bacteria to rumen Ciliates indicates adaptation to their anaerobic, carbohydrates-rich environment. BMC Genomics 7 (2006) 22
-
(2006)
BMC Genomics
, vol.7
, pp. 22
-
-
Ricard, G.1
McEwan, N.R.2
Dutilh, B.E.3
Jouany, J.P.4
Macheboeuf, D.5
Mitsumori, M.6
McIntosh, F.M.7
Michalowski, T.8
Nagamine, T.9
Nelson, N.10
-
35
-
-
30944435242
-
Pyruvate-phosphate dikinase of oxymonads and parabasalia and the evolution of pyrophosphate-dependent glycolysis in anaerobic eukaryotes
-
Slamovits C.H., and Keeling P.J. Pyruvate-phosphate dikinase of oxymonads and parabasalia and the evolution of pyrophosphate-dependent glycolysis in anaerobic eukaryotes. Eukaryot Cell 5 (2006) 148-154
-
(2006)
Eukaryot Cell
, vol.5
, pp. 148-154
-
-
Slamovits, C.H.1
Keeling, P.J.2
-
37
-
-
0034751692
-
Presence of prokaryotic and eukaryotic species in all subgroups of the PP(i)-dependent group II phosphofructokinase protein family
-
Muller M., Lee J.A., Gordon P., Gaasterland T., and Sensen C.W. Presence of prokaryotic and eukaryotic species in all subgroups of the PP(i)-dependent group II phosphofructokinase protein family. J Bacteriol 183 (2001) 6714-6716
-
(2001)
J Bacteriol
, vol.183
, pp. 6714-6716
-
-
Muller, M.1
Lee, J.A.2
Gordon, P.3
Gaasterland, T.4
Sensen, C.W.5
-
38
-
-
36549065968
-
The diversity of mitochondrion-related organelles amongst eukaryotic microbes
-
Martin W., and Müller M. (Eds), Springer-Verlag
-
Barbera M.J., Ruiz-Trillo I., Leigh J., Hug L.A., and Roger A.J. The diversity of mitochondrion-related organelles amongst eukaryotic microbes. In: Martin W., and Müller M. (Eds). Origins of Mitochondria and Hydrogenosomes (2007), Springer-Verlag 239-268
-
(2007)
Origins of Mitochondria and Hydrogenosomes
, pp. 239-268
-
-
Barbera, M.J.1
Ruiz-Trillo, I.2
Leigh, J.3
Hug, L.A.4
Roger, A.J.5
-
39
-
-
38649122429
-
The [FeFe] hydrogenase of Nyctotherus ovalis has a chimeric origin
-
The distribution of hydrogenase genes in eukaryotes has suggested they may be prone to HGT, but in this paper the authors suggest that various domains of a single hydrogenase enzyme were derived from several HGT events from different sources.
-
Boxma B., Ricard G., van Hoek A.H., Severing E., Moon-van der Staay S.Y., van der Staay G.W., van Alen T.A., de Graaf R.M., Cremers G., Kwantes M., et al. The [FeFe] hydrogenase of Nyctotherus ovalis has a chimeric origin. BMC Evol Biol 7 (2007) 230. The distribution of hydrogenase genes in eukaryotes has suggested they may be prone to HGT, but in this paper the authors suggest that various domains of a single hydrogenase enzyme were derived from several HGT events from different sources.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 230
-
-
Boxma, B.1
Ricard, G.2
van Hoek, A.H.3
Severing, E.4
Moon-van der Staay, S.Y.5
van der Staay, G.W.6
van Alen, T.A.7
de Graaf, R.M.8
Cremers, G.9
Kwantes, M.10
-
41
-
-
0030452653
-
A massive phytoplankton bloom induced by an ecosystem-scale iron fertilization experiment in the equatorial Pacific Ocean
-
Coale K.H., Johnson K.S., Fitzwater S.E., Gordon R.M., Tanner S., Chavez F.P., Ferioli L., Sakamoto C., Rogers P., Millero F., et al. A massive phytoplankton bloom induced by an ecosystem-scale iron fertilization experiment in the equatorial Pacific Ocean. Nature 383 (1996) 495-501
-
(1996)
Nature
, vol.383
, pp. 495-501
-
-
Coale, K.H.1
Johnson, K.S.2
Fitzwater, S.E.3
Gordon, R.M.4
Tanner, S.5
Chavez, F.P.6
Ferioli, L.7
Sakamoto, C.8
Rogers, P.9
Millero, F.10
-
42
-
-
58749100808
-
Ferritin is used for iron storage in bloom-forming marine pennate diatoms
-
Iron is the limiting nutrient in much of the ocean, and in this paper the authors show that marine diatoms that bloom in response to iron encode a gene for ferritin. Ferritin allows these organisms to sequester iron during times of abundance and store it for times of need, explaining why they bloom.
-
Marchetti A., Parker M.S., Moccia L.P., Lin E.O., Arrieta A.L., Ribalet F., Murphy M.E., Maldonado M.T., and Armbrust E.V. Ferritin is used for iron storage in bloom-forming marine pennate diatoms. Nature 457 (2009) 467-470. Iron is the limiting nutrient in much of the ocean, and in this paper the authors show that marine diatoms that bloom in response to iron encode a gene for ferritin. Ferritin allows these organisms to sequester iron during times of abundance and store it for times of need, explaining why they bloom.
-
(2009)
Nature
, vol.457
, pp. 467-470
-
-
Marchetti, A.1
Parker, M.S.2
Moccia, L.P.3
Lin, E.O.4
Arrieta, A.L.5
Ribalet, F.6
Murphy, M.E.7
Maldonado, M.T.8
Armbrust, E.V.9
-
43
-
-
48749127648
-
Whole-cell response of the pennate diatom Phaeodactylum tricornutum to iron starvation
-
••], this paper shows diatoms acquired a gene allowing them to utilize rare iron resources by HGT.
-
••], this paper shows diatoms acquired a gene allowing them to utilize rare iron resources by HGT.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 10438-11043
-
-
Allen, A.E.1
Laroche, J.2
Maheswari, U.3
Lommer, M.4
Schauer, N.5
Lopez, P.J.6
Finazzi, G.7
Fernie, A.R.8
Bowler, C.9
-
45
-
-
56249098614
-
The Phaeodactylum genome reveals the evolutionary history of diatom genomes
-
The complete genome of a diatom, which contains a number of genes derived by HGT, many of which affect the organisms ability to cope with nitrogen metabolism.
-
Bowler C., Allen A.E., Badger J.H., Grimwood J., Jabbari K., Kuo A., Maheswari U., Martens C., Maumus F., Otillar R.P., et al. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Nature 456 (2008) 239-244. The complete genome of a diatom, which contains a number of genes derived by HGT, many of which affect the organisms ability to cope with nitrogen metabolism.
-
(2008)
Nature
, vol.456
, pp. 239-244
-
-
Bowler, C.1
Allen, A.E.2
Badger, J.H.3
Grimwood, J.4
Jabbari, K.5
Kuo, A.6
Maheswari, U.7
Martens, C.8
Maumus, F.9
Otillar, R.P.10
-
46
-
-
64849088316
-
Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas
-
•], the genomes of two marine green algae acquired many genes via HGT, and a number of these are involved in nitrogen metabolism.
-
•], the genomes of two marine green algae acquired many genes via HGT, and a number of these are involved in nitrogen metabolism.
-
(2009)
Science
, vol.324
, pp. 268-272
-
-
Worden, A.Z.1
Lee, J.H.2
Mock, T.3
Rouze, P.4
Simmons, M.P.5
Aerts, A.L.6
Allen, A.E.7
Cuvelier, M.L.8
Derelle, E.9
Everett, M.V.10
-
47
-
-
34248350454
-
Phylogeographic support for horizontal gene transfer involving sympatric bruchid species
-
Alvarez N., Benrey B., Hossaert-McKey M., Grill A., McKey D., and Galtier N. Phylogeographic support for horizontal gene transfer involving sympatric bruchid species. Biol Direct 1 (2006) 21
-
(2006)
Biol Direct
, vol.1
, pp. 21
-
-
Alvarez, N.1
Benrey, B.2
Hossaert-McKey, M.3
Grill, A.4
McKey, D.5
Galtier, N.6
-
48
-
-
0030901705
-
Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution
-
Hacker J., Blum-Oehler G., Muhldorfer I., and Tschape H. Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution. Mol Microbiol 23 (1997) 1089-1097
-
(1997)
Mol Microbiol
, vol.23
, pp. 1089-1097
-
-
Hacker, J.1
Blum-Oehler, G.2
Muhldorfer, I.3
Tschape, H.4
-
49
-
-
0033752502
-
Lateral gene transfer and metabolic adaptation in the human parasite Trichomonas vaginalis
-
de Koning A.P., Brinkman F.S., Jones S.J., and Keeling P.J. Lateral gene transfer and metabolic adaptation in the human parasite Trichomonas vaginalis. Mol Biol Evol 17 (2000) 1769-1773
-
(2000)
Mol Biol Evol
, vol.17
, pp. 1769-1773
-
-
de Koning, A.P.1
Brinkman, F.S.2
Jones, S.J.3
Keeling, P.J.4
-
51
-
-
6344249854
-
Lateral gene transfer and re-compartmentalisation of Calvin cycle enzymes in plants and algae
-
Rogers M.B., and Keeling P.J. Lateral gene transfer and re-compartmentalisation of Calvin cycle enzymes in plants and algae. J Mol Evol 58 (2003) 367-375
-
(2003)
J Mol Evol
, vol.58
, pp. 367-375
-
-
Rogers, M.B.1
Keeling, P.J.2
-
52
-
-
0142153849
-
Bacterial catalase in the microsporidian Nosema locustae: implications for microsporidian metabolism and genome evolution
-
Fast N.M., Law J.S., Williams B.A., and Keeling P.J. Bacterial catalase in the microsporidian Nosema locustae: implications for microsporidian metabolism and genome evolution. Eukaryot Cell 2 (2003) 1069-1075
-
(2003)
Eukaryot Cell
, vol.2
, pp. 1069-1075
-
-
Fast, N.M.1
Law, J.S.2
Williams, B.A.3
Keeling, P.J.4
-
53
-
-
4344662030
-
Class II photolyase in a microsporidian intracellular parasite
-
Slamovits C.H., and Keeling P.J. Class II photolyase in a microsporidian intracellular parasite. J Mol Biol 341 (2004) 713-721
-
(2004)
J Mol Biol
, vol.341
, pp. 713-721
-
-
Slamovits, C.H.1
Keeling, P.J.2
-
54
-
-
0037197911
-
Genetic complementation in apicomplexan parasites
-
Striepen B., White M.W., Li C., Guerini M.N., Malik S.B., Logsdon Jr. J.M., Liu C., and Abrahamsen M.S. Genetic complementation in apicomplexan parasites. Proc Natl Acad Sci U S A 99 (2002) 6304-6309
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 6304-6309
-
-
Striepen, B.1
White, M.W.2
Li, C.3
Guerini, M.N.4
Malik, S.B.5
Logsdon Jr., J.M.6
Liu, C.7
Abrahamsen, M.S.8
-
55
-
-
1542267798
-
Gene transfer in the evolution of parasite nucleotide biosynthesis
-
Striepen B., Pruijssers A.J., Huang J., Li C., Gubbels M.J., Umejiego N.N., Hedstrom L., and Kissinger J.C. Gene transfer in the evolution of parasite nucleotide biosynthesis. Proc Natl Acad Sci U S A 101 (2004) 3154-3159
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 3154-3159
-
-
Striepen, B.1
Pruijssers, A.J.2
Huang, J.3
Li, C.4
Gubbels, M.J.5
Umejiego, N.N.6
Hedstrom, L.7
Kissinger, J.C.8
-
56
-
-
38349082511
-
Targeting a prokaryotic protein in a eukaryotic pathogen: identification of lead compounds against cryptosporidiosis
-
Parasites have acquired many genes from bacteria, and in this paper the authors characterize the function of one such gene in a human parasite. They show the gene, distantly related to anything in the human host, is sensitive to a number of drugs, providing new possibilities to treat the infection.
-
Umejiego N.N., Gollapalli D., Sharling L., Volftsun A., Lu J., Benjamin N.N., Stroupe A.H., Riera T.V., Striepen B., and Hedstrom L. Targeting a prokaryotic protein in a eukaryotic pathogen: identification of lead compounds against cryptosporidiosis. Chem Biol 15 (2008) 70-77. Parasites have acquired many genes from bacteria, and in this paper the authors characterize the function of one such gene in a human parasite. They show the gene, distantly related to anything in the human host, is sensitive to a number of drugs, providing new possibilities to treat the infection.
-
(2008)
Chem Biol
, vol.15
, pp. 70-77
-
-
Umejiego, N.N.1
Gollapalli, D.2
Sharling, L.3
Volftsun, A.4
Lu, J.5
Benjamin, N.N.6
Stroupe, A.H.7
Riera, T.V.8
Striepen, B.9
Hedstrom, L.10
-
57
-
-
33745618670
-
Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes
-
Andersson J.O., Hirt R.P., Foster P.G., and Roger A.J. Evolution of four gene families with patchy phylogenetic distributions: influx of genes into protist genomes. BMC Evol Biol 6 (2006) 27
-
(2006)
BMC Evol Biol
, vol.6
, pp. 27
-
-
Andersson, J.O.1
Hirt, R.P.2
Foster, P.G.3
Roger, A.J.4
-
58
-
-
45849089569
-
Massive horizontal gene transfer in bdelloid rotifers
-
Gladyshev E.A., Meselson M., and Arkhipova I.R. Massive horizontal gene transfer in bdelloid rotifers. Science 320 (2008) 1210-1213
-
(2008)
Science
, vol.320
, pp. 1210-1213
-
-
Gladyshev, E.A.1
Meselson, M.2
Arkhipova, I.R.3
-
59
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
Lander E.S., Linton L.M., Birren B., Nusbaum C., Zody M.C., Baldwin J., Devon K., Dewar K., Doyle M., FitzHugh W., et al. Initial sequencing and analysis of the human genome. Nature 409 (2001) 860-921
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
Lander, E.S.1
Linton, L.M.2
Birren, B.3
Nusbaum, C.4
Zody, M.C.5
Baldwin, J.6
Devon, K.7
Dewar, K.8
Doyle, M.9
FitzHugh, W.10
-
60
-
-
0035827328
-
Microbial genes in the human genome: lateral transfer or gene loss?
-
Salzberg S.L., White O., Peterson J., and Eisen J.A. Microbial genes in the human genome: lateral transfer or gene loss?. Science 292 (2001) 1903-1906
-
(2001)
Science
, vol.292
, pp. 1903-1906
-
-
Salzberg, S.L.1
White, O.2
Peterson, J.3
Eisen, J.A.4
-
61
-
-
0035963319
-
Genes lost during evolution
-
Roelofs J., and Van Haastert P.J. Genes lost during evolution. Nature 411 (2001) 1013-1014
-
(2001)
Nature
, vol.411
, pp. 1013-1014
-
-
Roelofs, J.1
Van Haastert, P.J.2
-
62
-
-
30344471824
-
Do different surrogate methods detect lateral genetic transfer events of different relative ages?
-
Ragan M.A., Harlow T.J., and Beiko R.G. Do different surrogate methods detect lateral genetic transfer events of different relative ages?. Trends Microbiol 14 (2006) 4-8
-
(2006)
Trends Microbiol
, vol.14
, pp. 4-8
-
-
Ragan, M.A.1
Harlow, T.J.2
Beiko, R.G.3
-
63
-
-
0036527850
-
Contamination in the draft of the human genome masquerades as lateral gene transfer
-
Willerslev E., Mourier T., Hansen A.J., Christensen B., Barnes I., and Salzberg S.L. Contamination in the draft of the human genome masquerades as lateral gene transfer. DNA Seq 13 (2002) 75-76
-
(2002)
DNA Seq
, vol.13
, pp. 75-76
-
-
Willerslev, E.1
Mourier, T.2
Hansen, A.J.3
Christensen, B.4
Barnes, I.5
Salzberg, S.L.6
-
64
-
-
0036252478
-
The misidentification of bacterial genes as human cDNAs: was the human D-1 tumor antigen gene acquired from bacteria?
-
Skaar E.P., and Seifert H.S. The misidentification of bacterial genes as human cDNAs: was the human D-1 tumor antigen gene acquired from bacteria?. Genomics 79 (2002) 625-627
-
(2002)
Genomics
, vol.79
, pp. 625-627
-
-
Skaar, E.P.1
Seifert, H.S.2
-
65
-
-
33748895571
-
An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters
-
Rice D.W., and Palmer J.D. An exceptional horizontal gene transfer in plastids: gene replacement by a distant bacterial paralog and evidence that haptophyte and cryptophyte plastids are sisters. BMC Biol 4 (2006) 31
-
(2006)
BMC Biol
, vol.4
, pp. 31
-
-
Rice, D.W.1
Palmer, J.D.2
-
66
-
-
0036139471
-
Eukaryotic genes in Mycobacterium tuberculosis could have a role in pathogenesis and immunomodulation
-
Gamieldien J., Ptitsyn A., and Hide W. Eukaryotic genes in Mycobacterium tuberculosis could have a role in pathogenesis and immunomodulation. Trends Genet 18 (2002) 5-8
-
(2002)
Trends Genet
, vol.18
, pp. 5-8
-
-
Gamieldien, J.1
Ptitsyn, A.2
Hide, W.3
-
67
-
-
0345724810
-
Eukaryotic genes in Mycobacterium tuberculosis? Possible alternative explanations
-
Kinsella R.J., and McInerney J.O. Eukaryotic genes in Mycobacterium tuberculosis? Possible alternative explanations. Trends Genet 19 (2003) 687-689
-
(2003)
Trends Genet
, vol.19
, pp. 687-689
-
-
Kinsella, R.J.1
McInerney, J.O.2
|