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Volumn 16, Issue 18, 2006, Pages 1857-1864

Evolution of Filamentous Plant Pathogens: Gene Exchange across Eukaryotic Kingdoms

Author keywords

EVO_ECOL

Indexed keywords

ALGAL PROTEIN; CARRIER PROTEIN; FUNGAL PROTEIN;

EID: 33748455342     PISSN: 09609822     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cub.2006.07.052     Document Type: Article
Times cited : (152)

References (35)
  • 1
    • 0002954639 scopus 로고
    • Observations, botanical and physiological, on the potato murrain
    • Berkeley M.J. Observations, botanical and physiological, on the potato murrain. Horticultural Society Journal 1 (1846) 9-34
    • (1846) Horticultural Society Journal , vol.1 , pp. 9-34
    • Berkeley, M.J.1
  • 2
    • 4644280003 scopus 로고    scopus 로고
    • Detection and quantification of Phytophthora ramorum from California forests using a real-time polymerase chain reaction assay
    • Hayden K.J., Rizzo D., Tse J., and Garbelotto M. Detection and quantification of Phytophthora ramorum from California forests using a real-time polymerase chain reaction assay. Phytopathology 94 (2004) 1075-1083
    • (2004) Phytopathology , vol.94 , pp. 1075-1083
    • Hayden, K.J.1    Rizzo, D.2    Tse, J.3    Garbelotto, M.4
  • 4
    • 12544255323 scopus 로고    scopus 로고
    • The real "kingdoms" of eukaryotes
    • Simpson A.G., and Roger A.J. The real "kingdoms" of eukaryotes. Curr. Biol. 14 (2004) R693-R696
    • (2004) Curr. Biol. , vol.14
    • Simpson, A.G.1    Roger, A.J.2
  • 5
    • 3843112145 scopus 로고    scopus 로고
    • Biomechanical evidence for convergent evolution of invasive growth process among fungi and oomycete water molds
    • Money N.P., Davis C.M., and Ravishanker J.P. Biomechanical evidence for convergent evolution of invasive growth process among fungi and oomycete water molds. Fungal Genet. Biol. 41 (2004) 872-876
    • (2004) Fungal Genet. Biol. , vol.41 , pp. 872-876
    • Money, N.P.1    Davis, C.M.2    Ravishanker, J.P.3
  • 6
    • 0000446465 scopus 로고
    • Stramenopiles: Chromophytes from a protistan perspective
    • Green J.C., Leadbeater B.S.C., and Diver W.L. (Eds), Clarendon, Oxford
    • Patterson D.J. Stramenopiles: Chromophytes from a protistan perspective. In: Green J.C., Leadbeater B.S.C., and Diver W.L. (Eds). the Chromophyte Algae, Problems and Perspectives (1989), Clarendon, Oxford 357-379
    • (1989) the Chromophyte Algae, Problems and Perspectives , pp. 357-379
    • Patterson, D.J.1
  • 10
    • 0034602344 scopus 로고    scopus 로고
    • A kingdom-level phylogeny of eukaryotes based on combined protein data
    • Baldauf S.L., Roger A.J., Wenk-Siefert I., and Doolittle W.F. A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 290 (2000) 972-977
    • (2000) Science , vol.290 , pp. 972-977
    • Baldauf, S.L.1    Roger, A.J.2    Wenk-Siefert, I.3    Doolittle, W.F.4
  • 11
    • 0037838657 scopus 로고    scopus 로고
    • Horizontal gene transfer and the evolution of parasitic protozoa
    • Richards T.A., Hirt R.P., Williams B.A., and Embley T.M. Horizontal gene transfer and the evolution of parasitic protozoa. Protist 154 (2003) 17-32
    • (2003) Protist , vol.154 , pp. 17-32
    • Richards, T.A.1    Hirt, R.P.2    Williams, B.A.3    Embley, T.M.4
  • 13
    • 0037458124 scopus 로고    scopus 로고
    • Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes
    • Andersson J.O., Sjogren A.M., Davis L.A.M., Embley T.M., and Roger A.J. Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes. Curr. Biol. 13 (2003) 94-104
    • (2003) Curr. Biol. , vol.13 , pp. 94-104
    • Andersson, J.O.1    Sjogren, A.M.2    Davis, L.A.M.3    Embley, T.M.4    Roger, A.J.5
  • 14
    • 0038714278 scopus 로고    scopus 로고
    • Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans
    • Archibald J.M., Rogers M.B., Toop M., Ishida K., and Keeling P.J. Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans. Proc. Natl. Acad. Sci. USA 100 (2003) 7678-7683
    • (2003) Proc. Natl. Acad. Sci. USA , vol.100 , pp. 7678-7683
    • Archibald, J.M.1    Rogers, M.B.2    Toop, M.3    Ishida, K.4    Keeling, P.J.5
  • 17
    • 0037329108 scopus 로고    scopus 로고
    • Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability
    • Douady C.J., Delsuc F., Boucher Y., Doolittle W.F., and Douzery E.J. Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability. Mol. Biol. Evol. 20 (2003) 248-254
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 248-254
    • Douady, C.J.1    Delsuc, F.2    Boucher, Y.3    Doolittle, W.F.4    Douzery, E.J.5
  • 19
    • 0034967775 scopus 로고    scopus 로고
    • New plasmid system to select for Saccharomyces cerevisiae purine-cytosine permease affinity mutants
    • Wagner R., Straub M.L., Souciet J.L., Potier S., and Montigny J. New plasmid system to select for Saccharomyces cerevisiae purine-cytosine permease affinity mutants. J. Bacteriol. 183 (2001) 4386-4388
    • (2001) J. Bacteriol. , vol.183 , pp. 4386-4388
    • Wagner, R.1    Straub, M.L.2    Souciet, J.L.3    Potier, S.4    Montigny, J.5
  • 20
    • 0029795374 scopus 로고    scopus 로고
    • The β-ketoadipate pathway and the biology of self-identity
    • Harwood C.S., and Parales R.E. The β-ketoadipate pathway and the biology of self-identity. Annu. Rev. Microbiol. 50 (1996) 553-590
    • (1996) Annu. Rev. Microbiol. , vol.50 , pp. 553-590
    • Harwood, C.S.1    Parales, R.E.2
  • 22
    • 0033754309 scopus 로고    scopus 로고
    • Key aromatic ring cleaving enzyme, protocatechuate 3,4-dioxygenase, in the ecologically important marine Roseobacter lineage
    • Buchan A., Collier L.S., Neidle E.L., and Moran M.A. Key aromatic ring cleaving enzyme, protocatechuate 3,4-dioxygenase, in the ecologically important marine Roseobacter lineage. Appl. Environ. Microbiol. 66 (2000) 4662-4672
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 4662-4672
    • Buchan, A.1    Collier, L.S.2    Neidle, E.L.3    Moran, M.A.4
  • 23
    • 0032404453 scopus 로고    scopus 로고
    • You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes
    • Doolittle W.F. You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Trends Genet. 14 (1998) 307-311
    • (1998) Trends Genet. , vol.14 , pp. 307-311
    • Doolittle, W.F.1
  • 25
    • 0032699667 scopus 로고    scopus 로고
    • Ultrastructure as a control for protistan molecular phylogeny
    • Taylor F.J. Ultrastructure as a control for protistan molecular phylogeny. Am. Nat. 154 (1999) S125-S136
    • (1999) Am. Nat. , vol.154
    • Taylor, F.J.1
  • 26
    • 0028323420 scopus 로고
    • The chaperone connection to the origins of the eukaryotic organelles
    • Viale A.M., and Arakaki A.K. The chaperone connection to the origins of the eukaryotic organelles. FEBS Lett. 341 (1994) 146-151
    • (1994) FEBS Lett. , vol.341 , pp. 146-151
    • Viale, A.M.1    Arakaki, A.K.2
  • 27
    • 3242878412 scopus 로고    scopus 로고
    • 3DCoffee: A web server for mixing sequences and structures into multiple alignments
    • Poirot O., Suhre K., Abergel C., O'Toole E., and Notredame C. 3DCoffee: A web server for mixing sequences and structures into multiple alignments. Nucleic Acids Res. 1 (2004) 37-40
    • (2004) Nucleic Acids Res. , vol.1 , pp. 37-40
    • Poirot, O.1    Suhre, K.2    Abergel, C.3    O'Toole, E.4    Notredame, C.5
  • 28
    • 33748465166 scopus 로고    scopus 로고
    • Rambaut, A. (1996). Se-Al: Sequence Alignment Editor. =http://evolve.zoo.ox.ac.uk/software.html?id=seal.
  • 29
    • 33645816587 scopus 로고    scopus 로고
    • Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
    • Keane T.M., Creevey C.J., Pentony M.M., Naughton T.J., James O., and McInerney J.O. Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evol. Biol. 6 (2006) 29
    • (2006) BMC Evol. Biol. , vol.6 , pp. 29
    • Keane, T.M.1    Creevey, C.J.2    Pentony, M.M.3    Naughton, T.J.4    James, O.5    McInerney, J.O.6
  • 30
    • 0041386108 scopus 로고    scopus 로고
    • MRBAYES 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F., and Huelsenbeck J.P. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 31
    • 0036205377 scopus 로고    scopus 로고
    • TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing
    • Schmidt H.A., Strimmer K., Vingron M., and von Haeseler A. TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18 (2002) 502-504
    • (2002) Bioinformatics , vol.18 , pp. 502-504
    • Schmidt, H.A.1    Strimmer, K.2    Vingron, M.3    von Haeseler, A.4
  • 32
    • 33748454505 scopus 로고    scopus 로고
    • Holder, M., and Roger, A.J. PUZZLEBOOT version 1.03. http://hades.biochem.dal.ca/Rogerlab/Software/software.html.
  • 33
    • 33748466371 scopus 로고    scopus 로고
    • Felsenstein, J. (1995). PHYLIP (Phylogeny Inference Package), 3.57 ed. Department of Genetics, University of Washington Seattle.
  • 34
    • 23144433822 scopus 로고    scopus 로고
    • PHYML Online- a web server for fast maximum likelihood-based phylogenetic inference
    • Guindon S., Lethiec F., Duroux P., and Gascuel O. PHYML Online- a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res. 33 (2005) W557-W559
    • (2005) Nucleic Acids Res. , vol.33
    • Guindon, S.1    Lethiec, F.2    Duroux, P.3    Gascuel, O.4
  • 35
    • 0034503382 scopus 로고    scopus 로고
    • Opinion: Long branch attraction and protist phylogeny
    • Philippe H. Opinion: Long branch attraction and protist phylogeny. Protist 151 (2000) 307-316
    • (2000) Protist , vol.151 , pp. 307-316
    • Philippe, H.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.