-
1
-
-
0002954639
-
Observations, botanical and physiological, on the potato murrain
-
Berkeley M.J. Observations, botanical and physiological, on the potato murrain. Horticultural Society Journal 1 (1846) 9-34
-
(1846)
Horticultural Society Journal
, vol.1
, pp. 9-34
-
-
Berkeley, M.J.1
-
2
-
-
4644280003
-
Detection and quantification of Phytophthora ramorum from California forests using a real-time polymerase chain reaction assay
-
Hayden K.J., Rizzo D., Tse J., and Garbelotto M. Detection and quantification of Phytophthora ramorum from California forests using a real-time polymerase chain reaction assay. Phytopathology 94 (2004) 1075-1083
-
(2004)
Phytopathology
, vol.94
, pp. 1075-1083
-
-
Hayden, K.J.1
Rizzo, D.2
Tse, J.3
Garbelotto, M.4
-
4
-
-
12544255323
-
The real "kingdoms" of eukaryotes
-
Simpson A.G., and Roger A.J. The real "kingdoms" of eukaryotes. Curr. Biol. 14 (2004) R693-R696
-
(2004)
Curr. Biol.
, vol.14
-
-
Simpson, A.G.1
Roger, A.J.2
-
5
-
-
3843112145
-
Biomechanical evidence for convergent evolution of invasive growth process among fungi and oomycete water molds
-
Money N.P., Davis C.M., and Ravishanker J.P. Biomechanical evidence for convergent evolution of invasive growth process among fungi and oomycete water molds. Fungal Genet. Biol. 41 (2004) 872-876
-
(2004)
Fungal Genet. Biol.
, vol.41
, pp. 872-876
-
-
Money, N.P.1
Davis, C.M.2
Ravishanker, J.P.3
-
6
-
-
0000446465
-
Stramenopiles: Chromophytes from a protistan perspective
-
Green J.C., Leadbeater B.S.C., and Diver W.L. (Eds), Clarendon, Oxford
-
Patterson D.J. Stramenopiles: Chromophytes from a protistan perspective. In: Green J.C., Leadbeater B.S.C., and Diver W.L. (Eds). the Chromophyte Algae, Problems and Perspectives (1989), Clarendon, Oxford 357-379
-
(1989)
the Chromophyte Algae, Problems and Perspectives
, pp. 357-379
-
-
Patterson, D.J.1
-
8
-
-
0023392043
-
Phylogenetic relationships between chlorophytes, chrysophytes and oomycetes
-
Gundersen J.H., Elwood H., Ingold A., Kindle K., and Sogin M.L. Phylogenetic relationships between chlorophytes, chrysophytes and oomycetes. Proc. Natl. Acad. Sci. USA 84 (1987) 5823-5827
-
(1987)
Proc. Natl. Acad. Sci. USA
, vol.84
, pp. 5823-5827
-
-
Gundersen, J.H.1
Elwood, H.2
Ingold, A.3
Kindle, K.4
Sogin, M.L.5
-
9
-
-
0037108325
-
The closest unicellular relatives of animals
-
Lang B.F., O'Kelly C., Nerad T., Gray M.W., and Burger G. The closest unicellular relatives of animals. Curr. Biol. 12 (2002) 1773-1778
-
(2002)
Curr. Biol.
, vol.12
, pp. 1773-1778
-
-
Lang, B.F.1
O'Kelly, C.2
Nerad, T.3
Gray, M.W.4
Burger, G.5
-
10
-
-
0034602344
-
A kingdom-level phylogeny of eukaryotes based on combined protein data
-
Baldauf S.L., Roger A.J., Wenk-Siefert I., and Doolittle W.F. A kingdom-level phylogeny of eukaryotes based on combined protein data. Science 290 (2000) 972-977
-
(2000)
Science
, vol.290
, pp. 972-977
-
-
Baldauf, S.L.1
Roger, A.J.2
Wenk-Siefert, I.3
Doolittle, W.F.4
-
11
-
-
0037838657
-
Horizontal gene transfer and the evolution of parasitic protozoa
-
Richards T.A., Hirt R.P., Williams B.A., and Embley T.M. Horizontal gene transfer and the evolution of parasitic protozoa. Protist 154 (2003) 17-32
-
(2003)
Protist
, vol.154
, pp. 17-32
-
-
Richards, T.A.1
Hirt, R.P.2
Williams, B.A.3
Embley, T.M.4
-
12
-
-
14544294428
-
The genome of the protist parasite Entamoeba histolytica
-
Loftus B., Anderson I., Davies R., Alsmark U.C., Samuelson J., Amedeo P., Roncaglia P., Berriman M., Hirt R.P., Mann B.J., et al. The genome of the protist parasite Entamoeba histolytica. Nature 433 (2005) 865-868
-
(2005)
Nature
, vol.433
, pp. 865-868
-
-
Loftus, B.1
Anderson, I.2
Davies, R.3
Alsmark, U.C.4
Samuelson, J.5
Amedeo, P.6
Roncaglia, P.7
Berriman, M.8
Hirt, R.P.9
Mann, B.J.10
-
13
-
-
0037458124
-
Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes
-
Andersson J.O., Sjogren A.M., Davis L.A.M., Embley T.M., and Roger A.J. Phylogenetic analyses of diplomonad genes reveal frequent lateral gene transfers affecting eukaryotes. Curr. Biol. 13 (2003) 94-104
-
(2003)
Curr. Biol.
, vol.13
, pp. 94-104
-
-
Andersson, J.O.1
Sjogren, A.M.2
Davis, L.A.M.3
Embley, T.M.4
Roger, A.J.5
-
14
-
-
0038714278
-
Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans
-
Archibald J.M., Rogers M.B., Toop M., Ishida K., and Keeling P.J. Lateral gene transfer and the evolution of plastid-targeted proteins in the secondary plastid-containing alga Bigelowiella natans. Proc. Natl. Acad. Sci. USA 100 (2003) 7678-7683
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 7678-7683
-
-
Archibald, J.M.1
Rogers, M.B.2
Toop, M.3
Ishida, K.4
Keeling, P.J.5
-
15
-
-
0242276676
-
Lateral gene transfer and the origins of prokaryotic groups
-
Boucher Y., Douady C.J., Papke R.T., Walsh D.A., Boudreau M.E., Nesbo C.L., Case R.J., and Doolittle W.F. Lateral gene transfer and the origins of prokaryotic groups. Annu. Rev. Genet. 37 (2003) 283-328
-
(2003)
Annu. Rev. Genet.
, vol.37
, pp. 283-328
-
-
Boucher, Y.1
Douady, C.J.2
Papke, R.T.3
Walsh, D.A.4
Boudreau, M.E.5
Nesbo, C.L.6
Case, R.J.7
Doolittle, W.F.8
-
16
-
-
20244366844
-
The genome sequence of the rice blast fungus Magnaporthe grisea
-
Dean R.A., Talbot N.J., Ebbole D.J., Farman M.L., Mitchell T.K., Orbach M.J., Thon M., Kulkarni R., Xu J.R., Pan H., et al. The genome sequence of the rice blast fungus Magnaporthe grisea. Nature 434 (2005) 980-986
-
(2005)
Nature
, vol.434
, pp. 980-986
-
-
Dean, R.A.1
Talbot, N.J.2
Ebbole, D.J.3
Farman, M.L.4
Mitchell, T.K.5
Orbach, M.J.6
Thon, M.7
Kulkarni, R.8
Xu, J.R.9
Pan, H.10
-
17
-
-
0037329108
-
Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability
-
Douady C.J., Delsuc F., Boucher Y., Doolittle W.F., and Douzery E.J. Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability. Mol. Biol. Evol. 20 (2003) 248-254
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 248-254
-
-
Douady, C.J.1
Delsuc, F.2
Boucher, Y.3
Doolittle, W.F.4
Douzery, E.J.5
-
18
-
-
13444262384
-
CDD: A conserved domain database for protein classification
-
Marchler-Bauer A., Anderson J.B., Cherukuri P.F., DeWeese-Scott C., Geer L.Y., Gwadz M., He S., Hurwitz D.I., Jackson J.D., Ke Z., et al. CDD: A conserved domain database for protein classification. Nucleic Acids Res. 33 (2005) D192-D196
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Marchler-Bauer, A.1
Anderson, J.B.2
Cherukuri, P.F.3
DeWeese-Scott, C.4
Geer, L.Y.5
Gwadz, M.6
He, S.7
Hurwitz, D.I.8
Jackson, J.D.9
Ke, Z.10
-
19
-
-
0034967775
-
New plasmid system to select for Saccharomyces cerevisiae purine-cytosine permease affinity mutants
-
Wagner R., Straub M.L., Souciet J.L., Potier S., and Montigny J. New plasmid system to select for Saccharomyces cerevisiae purine-cytosine permease affinity mutants. J. Bacteriol. 183 (2001) 4386-4388
-
(2001)
J. Bacteriol.
, vol.183
, pp. 4386-4388
-
-
Wagner, R.1
Straub, M.L.2
Souciet, J.L.3
Potier, S.4
Montigny, J.5
-
20
-
-
0029795374
-
The β-ketoadipate pathway and the biology of self-identity
-
Harwood C.S., and Parales R.E. The β-ketoadipate pathway and the biology of self-identity. Annu. Rev. Microbiol. 50 (1996) 553-590
-
(1996)
Annu. Rev. Microbiol.
, vol.50
, pp. 553-590
-
-
Harwood, C.S.1
Parales, R.E.2
-
21
-
-
1342322694
-
UDP galactose 4-epimerase from Saccharomyces cerevisiae
-
Majumdar S., Ghatak J., Mukherji S., Bhattacharjee A., and Bhaduri A. UDP galactose 4-epimerase from Saccharomyces cerevisiae. Eur. J. Biochem. 271 (2004) 753-759
-
(2004)
Eur. J. Biochem.
, vol.271
, pp. 753-759
-
-
Majumdar, S.1
Ghatak, J.2
Mukherji, S.3
Bhattacharjee, A.4
Bhaduri, A.5
-
22
-
-
0033754309
-
Key aromatic ring cleaving enzyme, protocatechuate 3,4-dioxygenase, in the ecologically important marine Roseobacter lineage
-
Buchan A., Collier L.S., Neidle E.L., and Moran M.A. Key aromatic ring cleaving enzyme, protocatechuate 3,4-dioxygenase, in the ecologically important marine Roseobacter lineage. Appl. Environ. Microbiol. 66 (2000) 4662-4672
-
(2000)
Appl. Environ. Microbiol.
, vol.66
, pp. 4662-4672
-
-
Buchan, A.1
Collier, L.S.2
Neidle, E.L.3
Moran, M.A.4
-
23
-
-
0032404453
-
You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes
-
Doolittle W.F. You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Trends Genet. 14 (1998) 307-311
-
(1998)
Trends Genet.
, vol.14
, pp. 307-311
-
-
Doolittle, W.F.1
-
24
-
-
22744445156
-
Monophyly of primary photosynthetic eukaryotes: Green plants, red algae, and glaucophytes
-
Rodriguez-Ezpeleta N., Brinkmann H., Burey S.C., Roure B., Burger G., Loffelhardt W., Bohnert H.J., Philippe H., and Lang B.F. Monophyly of primary photosynthetic eukaryotes: Green plants, red algae, and glaucophytes. Curr. Biol. 15 (2005) 1325-1330
-
(2005)
Curr. Biol.
, vol.15
, pp. 1325-1330
-
-
Rodriguez-Ezpeleta, N.1
Brinkmann, H.2
Burey, S.C.3
Roure, B.4
Burger, G.5
Loffelhardt, W.6
Bohnert, H.J.7
Philippe, H.8
Lang, B.F.9
-
25
-
-
0032699667
-
Ultrastructure as a control for protistan molecular phylogeny
-
Taylor F.J. Ultrastructure as a control for protistan molecular phylogeny. Am. Nat. 154 (1999) S125-S136
-
(1999)
Am. Nat.
, vol.154
-
-
Taylor, F.J.1
-
26
-
-
0028323420
-
The chaperone connection to the origins of the eukaryotic organelles
-
Viale A.M., and Arakaki A.K. The chaperone connection to the origins of the eukaryotic organelles. FEBS Lett. 341 (1994) 146-151
-
(1994)
FEBS Lett.
, vol.341
, pp. 146-151
-
-
Viale, A.M.1
Arakaki, A.K.2
-
27
-
-
3242878412
-
3DCoffee: A web server for mixing sequences and structures into multiple alignments
-
Poirot O., Suhre K., Abergel C., O'Toole E., and Notredame C. 3DCoffee: A web server for mixing sequences and structures into multiple alignments. Nucleic Acids Res. 1 (2004) 37-40
-
(2004)
Nucleic Acids Res.
, vol.1
, pp. 37-40
-
-
Poirot, O.1
Suhre, K.2
Abergel, C.3
O'Toole, E.4
Notredame, C.5
-
28
-
-
33748465166
-
-
Rambaut, A. (1996). Se-Al: Sequence Alignment Editor. =http://evolve.zoo.ox.ac.uk/software.html?id=seal.
-
-
-
-
29
-
-
33645816587
-
Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified
-
Keane T.M., Creevey C.J., Pentony M.M., Naughton T.J., James O., and McInerney J.O. Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified. BMC Evol. Biol. 6 (2006) 29
-
(2006)
BMC Evol. Biol.
, vol.6
, pp. 29
-
-
Keane, T.M.1
Creevey, C.J.2
Pentony, M.M.3
Naughton, T.J.4
James, O.5
McInerney, J.O.6
-
30
-
-
0041386108
-
MRBAYES 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
31
-
-
0036205377
-
TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing
-
Schmidt H.A., Strimmer K., Vingron M., and von Haeseler A. TREE-PUZZLE: Maximum likelihood phylogenetic analysis using quartets and parallel computing. Bioinformatics 18 (2002) 502-504
-
(2002)
Bioinformatics
, vol.18
, pp. 502-504
-
-
Schmidt, H.A.1
Strimmer, K.2
Vingron, M.3
von Haeseler, A.4
-
32
-
-
33748454505
-
-
Holder, M., and Roger, A.J. PUZZLEBOOT version 1.03. http://hades.biochem.dal.ca/Rogerlab/Software/software.html.
-
-
-
-
33
-
-
33748466371
-
-
Felsenstein, J. (1995). PHYLIP (Phylogeny Inference Package), 3.57 ed. Department of Genetics, University of Washington Seattle.
-
-
-
-
34
-
-
23144433822
-
PHYML Online- a web server for fast maximum likelihood-based phylogenetic inference
-
Guindon S., Lethiec F., Duroux P., and Gascuel O. PHYML Online- a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res. 33 (2005) W557-W559
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Guindon, S.1
Lethiec, F.2
Duroux, P.3
Gascuel, O.4
-
35
-
-
0034503382
-
Opinion: Long branch attraction and protist phylogeny
-
Philippe H. Opinion: Long branch attraction and protist phylogeny. Protist 151 (2000) 307-316
-
(2000)
Protist
, vol.151
, pp. 307-316
-
-
Philippe, H.1
|