-
1
-
-
28244444605
-
Resistance to antimicrobials in humans and animals
-
Soulsby E.J. (2005) Resistance to antimicrobials in humans and animals. Br Med J 331 : 1219 1220.
-
(2005)
Br Med J
, vol.331
, pp. 1219-1220
-
-
Soulsby, E.J.1
-
2
-
-
33847719510
-
From magic bullets back to the magic mountain: The rise of extensively drug-resistant tuberculosis
-
Dorman S.E., Chaisson R.E. (2007) From magic bullets back to the magic mountain: the rise of extensively drug-resistant tuberculosis. Nat Med 13 : 295 298.
-
(2007)
Nat Med
, vol.13
, pp. 295-298
-
-
Dorman, S.E.1
Chaisson, R.E.2
-
3
-
-
33846847772
-
Resistance to targeted therapy in chronic myelogenous leukemia
-
Hochhaus A., Erben P., Ernst T., Mueller M.C. (2007) Resistance to targeted therapy in chronic myelogenous leukemia. Semin Hematol 44 : S15 S24.
-
(2007)
Semin Hematol
, vol.44
-
-
Hochhaus, A.1
Erben, P.2
Ernst, T.3
Mueller, M.C.4
-
4
-
-
13644254794
-
Molecular mechanisms of drug resistance
-
Longley D.B., Johnston P.G. (2005) Molecular mechanisms of drug resistance. J Pathol 205 : 275 292.
-
(2005)
J Pathol
, vol.205
, pp. 275-292
-
-
Longley, D.B.1
Johnston, P.G.2
-
5
-
-
9644257332
-
Adaptive inhibitors of the HIV-1 protease
-
Ohtaka H., Freire E. (2005) Adaptive inhibitors of the HIV-1 protease. Prog Biophys Mol Biol 88 : 193 208.
-
(2005)
Prog Biophys Mol Biol
, vol.88
, pp. 193-208
-
-
Ohtaka, H.1
Freire, E.2
-
6
-
-
5444247213
-
Combating susceptibility to drug resistance: Lessons from HIV-1 protease
-
King N.M., Prabu-Jeyabalan M., Nalivaika E.A., Schiffer C.A. (2004) Combating susceptibility to drug resistance: lessons from HIV-1 protease. Chem Biol 11 : 1333 1338.
-
(2004)
Chem Biol
, vol.11
, pp. 1333-1338
-
-
King, N.M.1
Prabu-Jeyabalan, M.2
Nalivaika, E.A.3
Schiffer, C.A.4
-
7
-
-
0024830949
-
Proteolytic processing of polyproteins in the replication of RNA viruses
-
Hellen C.U.T., Kräusslich H.-G., Wimmer E. (1989) Proteolytic processing of polyproteins in the replication of RNA viruses. Biochemistry 28 : 9881 9890.
-
(1989)
Biochemistry
, vol.28
, pp. 9881-9890
-
-
Hellen, C.U.T.1
Kräusslich, H.-G.2
Wimmer, E.3
-
8
-
-
34250794023
-
Evaluation of the substrate envelope hypothesis for inhibitors of HIV-1 protease
-
Chellappan S., Kairys V., Fernandes M.X., Schiffer C., Gilson M.K. (2007) Evaluation of the substrate envelope hypothesis for inhibitors of HIV-1 protease. Proteins 68 : 561 567.
-
(2007)
Proteins
, vol.68
, pp. 561-567
-
-
Chellappan, S.1
Kairys, V.2
Fernandes, M.X.3
Schiffer, C.4
Gilson, M.K.5
-
9
-
-
34249275362
-
Design of mutation-resistant HIV protease inhibitors with the substrate envelope hypothesis
-
Chellappan S., Reddy G.S.K.K., Ali A., Nalam M.N.L., Anjum S.G., Cao H., Kairys V., Fernandes M.X., Altman M.D., Tidor B., Rana T.M., Schiffer C.A., Gilson M.K. (2007) Design of mutation-resistant HIV protease inhibitors with the substrate envelope hypothesis. Chem Biol Drug Des 69 : 298 313.
-
(2007)
Chem Biol Drug des
, vol.69
, pp. 298-313
-
-
Chellappan, S.1
Reddy, G.S.K.K.2
Ali, A.3
Nalam, M.N.L.4
Anjum, S.G.5
Cao, H.6
Kairys, V.7
Fernandes, M.X.8
Altman, M.D.9
Tidor, B.10
Rana, T.M.11
Schiffer, C.A.12
Gilson, M.K.13
-
10
-
-
43249113922
-
HIV-1 protease inhibitors from inverse design in the substrate envelope exhibit subnanomolar binding to drug-resistant variants
-
Altman M.D., Ali A., Reddy G.S., Nalam M.N., Anjum S.G., Cao H., Chellappan S., Kairys V., Fernandes M.X., Gilson M.K., Schiffer C.A., Rana T.M., Tidor B. (2008) HIV-1 protease inhibitors from inverse design in the substrate envelope exhibit subnanomolar binding to drug-resistant variants. J Am Chem Soc 130 : 6099 6113.
-
(2008)
J Am Chem Soc
, vol.130
, pp. 6099-6113
-
-
Altman, M.D.1
Ali, A.2
Reddy, G.S.3
Nalam, M.N.4
Anjum, S.G.5
Cao, H.6
Chellappan, S.7
Kairys, V.8
Fernandes, M.X.9
Gilson, M.K.10
Schiffer, C.A.11
Rana, T.M.12
Tidor, B.13
-
11
-
-
68949214202
-
Combating drug resistance - Identifying resilient molecular targets and robust drugs
-
Stroud, R.M. Finer-Moore, J. editors. The Royal Society of Chemistry. Cambridge, UK
-
Schiffer C.A. (2008) Combating drug resistance - identifying resilient molecular targets and robust drugs. In : Stroud R.M., Finer-Moore J., editors. Computational and structural approaches to drug discovery. The Royal Society of Chemistry, Cambridge, UK p. 127 133.
-
(2008)
Computational and Structural Approaches to Drug Discovery.
, pp. 127-133
-
-
Schiffer, C.A.1
-
12
-
-
0032526697
-
Drug design against a shifting target: A structural basis for resistance to inhibitors in a variant of influenza virus neuraminidase
-
Varghese J.N., Smith P.W., Sollis S.L., Blick T.J., Sahasrabudhe A., McKimm-Breschkin J.L., Colman P.M. (1998) Drug design against a shifting target: a structural basis for resistance to inhibitors in a variant of influenza virus neuraminidase. Structure 6 : 735 746.
-
(1998)
Structure
, vol.6
, pp. 735-746
-
-
Varghese, J.N.1
Smith, P.W.2
Sollis, S.L.3
Blick, T.J.4
Sahasrabudhe, A.5
McKimm-Breschkin, J.L.6
Colman, P.M.7
-
13
-
-
0037095563
-
Neuraminidase inhibitors as antivirals
-
Colman P.M. (2002) Neuraminidase inhibitors as antivirals. Vaccine 20 (Suppl 2 S55 S58.
-
(2002)
Vaccine
, vol.20
, Issue.SUPPL. 2
-
-
Colman, P.M.1
-
14
-
-
17844379445
-
Zanamivir: An influenza virus neuraminidase inhibitor
-
Colman P.M. (2005) Zanamivir: an influenza virus neuraminidase inhibitor. Expert Rev Anti Infect Ther 3 : 191 199.
-
(2005)
Expert Rev Anti Infect Ther
, vol.3
, pp. 191-199
-
-
Colman, P.M.1
-
15
-
-
0033954256
-
The Protein Data Bank
-
Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H. et al. (2000) The Protein Data Bank. Nucl Acids Res 28 : 235 242.
-
(2000)
Nucl Acids Res
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
-
16
-
-
33846108633
-
BindingDB: A web-accessible database of experimentally determined protein-ligand binding affinities
-
Liu T., Lin Y., Wen X., Jorissen R.N., Gilson M.K. (2007) BindingDB: a web-accessible database of experimentally determined protein-ligand binding affinities. Nucleic Acids Res 35 : D198 D201.
-
(2007)
Nucleic Acids Res
, vol.35
-
-
Liu, T.1
Lin, Y.2
Wen, X.3
Jorissen, R.N.4
Gilson, M.K.5
-
17
-
-
20544433165
-
Van der Waals volumes and radii
-
Bondi A. (1964) van der Waals volumes and radii. J Phys Chem 68 : 441 451.
-
(1964)
J Phys Chem
, vol.68
, pp. 441-451
-
-
Bondi, A.1
-
18
-
-
0033833116
-
Protein structure alignment using environmental profiles
-
Jung J., Lee B. (2000) Protein structure alignment using environmental profiles. Protein Eng 13 : 535 543.
-
(2000)
Protein Eng
, vol.13
, pp. 535-543
-
-
Jung, J.1
Lee, B.2
-
19
-
-
14644425319
-
Mechanisms of BCR-ABL in the pathogenesis of chronic myelogenous leukaemia
-
Ren R. (2005) Mechanisms of BCR-ABL in the pathogenesis of chronic myelogenous leukaemia. Nat Rev Cancer 5 : 172 183.
-
(2005)
Nat Rev Cancer
, vol.5
, pp. 172-183
-
-
Ren, R.1
-
20
-
-
34848911943
-
Sequential ABL kinase inhibitor therapy selects for compound drug-resistant BCR-ABL mutations with altered oncogenic potency
-
Shah N.P., Skaggs B.J., Branford S., Hughes T.P., Nicoll J.M., Paquette R.L., Sawyers C.L. (2007) Sequential ABL kinase inhibitor therapy selects for compound drug-resistant BCR-ABL mutations with altered oncogenic potency. J Clin Invest 117 : 2562 2569.
-
(2007)
J Clin Invest
, vol.117
, pp. 2562-2569
-
-
Shah, N.P.1
Skaggs, B.J.2
Branford, S.3
Hughes, T.P.4
Nicoll, J.M.5
Paquette, R.L.6
Sawyers, C.L.7
-
21
-
-
33646755174
-
A Src-like inactive conformation in the abl tyrosine kinase domain
-
Levinson N.M., Kuchment O., Shen K., Young M.A., Koldobskiy M., Karplus M., Cole P.A., Kuriyan J. (2006) A Src-like inactive conformation in the abl tyrosine kinase domain. PLoS Biol 4 : e144.
-
(2006)
PLoS Biol
, vol.4
-
-
Levinson, N.M.1
Kuchment, O.2
Shen, K.3
Young, M.A.4
Koldobskiy, M.5
Karplus, M.6
Cole, P.A.7
Kuriyan, J.8
-
22
-
-
34248596802
-
Structure of Saccharomyces cerevisiae chitinase 1 and screening-based discovery of potent inhibitors
-
Hurtado-Guerrero R., van Aalten D.M.F. (2007) Structure of Saccharomyces cerevisiae chitinase 1 and screening-based discovery of potent inhibitors. Chem Biol 14 : 589 599.
-
(2007)
Chem Biol
, vol.14
, pp. 589-599
-
-
Hurtado-Guerrero, R.1
Van Aalten, D.M.F.2
-
23
-
-
12344317078
-
Specificity and affinity of natural product cyclopentapeptide inhibitors against A. fumigatus, human, and bacterial chitinases
-
Rao F.V., Houston D.R., Boot R.G., Aerts J.M.F.G., Hodkinson M., Adams D.J., Shiomi K., Ōmura S., van Aalten D.M.F (2005) Specificity and affinity of natural product cyclopentapeptide inhibitors against A. fumigatus, human, and bacterial chitinases. Chem Biol 12 : 65 76.
-
(2005)
Chem Biol
, vol.12
, pp. 65-76
-
-
Rao, F.V.1
Houston, D.R.2
Boot, R.G.3
Aerts, J.M.F.G.4
Hodkinson, M.5
Adams, D.J.6
Shiomi, K.7
Omura, S.8
Van Aalten, M.F.9
-
24
-
-
0035979240
-
Structural insights into the catalytic mechanism of a family 18 exo-chitinase
-
van Aalten D.M.F., Komander D., Synstad B., Gåseidnes S, Peter M.G., Eijsink V.G.H. (2001) Structural insights into the catalytic mechanism of a family 18 exo-chitinase. Proc Natl Acad Sci USA 98 : 8979 8984.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 8979-8984
-
-
Van Aalten, D.M.F.1
Komander, D.2
Synstad, B.3
Gåseidnes, S.4
Peter, M.G.5
Eijsink, V.G.H.6
-
25
-
-
0041784950
-
All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins
-
MacKerell A.D. Jr., Bashford D., Bellott M., Dunbrack R.L., Evanseck J.D., Field M.J., Fischer S. et al. (1998) All-Atom Empirical Potential for Molecular Modeling and Dynamics Studies of Proteins. J Phys Chem B 102 : 3586 3616.
-
(1998)
J Phys Chem B
, vol.102
, pp. 3586-3616
-
-
MacKerell Jr., A.D.1
Bashford, D.2
Bellott, M.3
Dunbrack, R.L.4
Evanseck, J.D.5
Field, M.J.6
Fischer, S.7
-
26
-
-
9144240095
-
DREIDING: A generic force field for molecular simulations
-
Mayo S.L., Olafson B.D., Goddard W.A. (1990) DREIDING: a generic force field for molecular simulations. J Phys Chem 94 : 8897 8909.
-
(1990)
J Phys Chem
, vol.94
, pp. 8897-8909
-
-
Mayo, S.L.1
Olafson, B.D.2
Goddard, W.A.3
-
27
-
-
0037047120
-
High-resolution structures of a chitinase complexed with natural product cyclopentapeptide inhibitors: Mimicry of carbohydrate substrate
-
Houston D.R., Shiomi K., Arai N., Ōmura S., Peter M.G., Turberg A., Synstad B., Eijsink V.G.H., van Aalten D.M.F. (2002) High-resolution structures of a chitinase complexed with natural product cyclopentapeptide inhibitors: mimicry of carbohydrate substrate. Proc Natl Acad Sci U S A 99 : 9127 9132.
-
(2002)
Proc Natl Acad Sci U S a
, vol.99
, pp. 9127-9132
-
-
Houston, D.R.1
Shiomi, K.2
Arai, N.3
Omura, S.4
Peter, M.G.5
Turberg, A.6
Synstad, B.7
Eijsink, V.G.H.8
Van Aalten, D.M.F.9
-
28
-
-
23844445571
-
Thymidylate synthase structure, function and implication in drug discovery
-
Costi M.P., Ferrari S., Venturelli A., Calò S., Tondi D., Barlocco D. (2005) Thymidylate synthase structure, function and implication in drug discovery. Curr Med Chem 12 : 2241 2258.
-
(2005)
Curr Med Chem
, vol.12
, pp. 2241-2258
-
-
Costi, M.P.1
Ferrari, S.2
Venturelli, A.3
Calò, S.4
Tondi, D.5
Barlocco, D.6
-
29
-
-
0344708478
-
Anticancer antifolates: Current status and future directions
-
McGuire J.J. (2003) Anticancer antifolates: current status and future directions. Curr Pharm Des 9 : 2593 2613.
-
(2003)
Curr Pharm des
, vol.9
, pp. 2593-2613
-
-
McGuire, J.J.1
-
30
-
-
33644508373
-
Dihydrofolate reductase inhibitors as antibacterial agents
-
Hawser S., Lociuro S., Islam K. (2006) Dihydrofolate reductase inhibitors as antibacterial agents. Biochem Pharmacol 71 : 941 948.
-
(2006)
Biochem Pharmacol
, vol.71
, pp. 941-948
-
-
Hawser, S.1
Lociuro, S.2
Islam, K.3
-
31
-
-
13844298790
-
Targeting DHFR in parasitic protozoa
-
Anderson A.C. (2005) Targeting DHFR in parasitic protozoa. Drug Discov Today 10 : 121 128.
-
(2005)
Drug Discov Today
, vol.10
, pp. 121-128
-
-
Anderson, A.C.1
-
32
-
-
25444501243
-
Neuraminidase inhibitors for influenza
-
Moscona A. (2005) Neuraminidase inhibitors for influenza. N Engl J Med 353 : 1363 1373.
-
(2005)
N Engl J Med
, vol.353
, pp. 1363-1373
-
-
Moscona, A.1
-
33
-
-
34548223154
-
Neuraminidase inhibitor resistance in influenza viruses
-
Reece P.A. (2007) Neuraminidase inhibitor resistance in influenza viruses. J Med Virol 79 : 1577 1586.
-
(2007)
J Med Virol
, vol.79
, pp. 1577-1586
-
-
Reece, P.A.1
-
34
-
-
23344440655
-
Inhibition of drug-resistant mutants of ABL, KIT, and EGF receptor kinases
-
Carter T.A., Wodicka L.M., Shah N.P., Velasco A.M., Fabian M.A., Treiber D.K., Milanov Z.V. et al. (2005) Inhibition of drug-resistant mutants of ABL, KIT, and EGF receptor kinases. Proc Natl Acad Sci U S A 102 : 11011 11016.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 11011-11016
-
-
Carter, T.A.1
Wodicka, L.M.2
Shah, N.P.3
Velasco, A.M.4
Fabian, M.A.5
Treiber, D.K.6
Milanov, Z.V.7
-
35
-
-
25144468884
-
Methylxanthine drugs are chitinase inhibitors: Investigation of inhibition and binding modes
-
Rao F.V., Andersen O.A., Vora K.A., DeMartino J.A., van Aalten D.M.F. (2005) Methylxanthine drugs are chitinase inhibitors: investigation of inhibition and binding modes. Chem Biol 12 : 973 980.
-
(2005)
Chem Biol
, vol.12
, pp. 973-980
-
-
Rao, F.V.1
Andersen, O.A.2
Vora, K.A.3
Demartino, J.A.4
Van Aalten, D.M.F.5
-
36
-
-
0032496226
-
Isolation and characterization of thymitaq (AG337) and 5-fluoro-2-deoxyuridylate-resistant mutants of human thymidylate synthase from ethyl methanesulfonate-exposed human sarcoma HT1080 cells
-
Tong Y., Liu-Chen X., Ercikan-Abali E.A., Capiaux G.M., Zhao S.C., Banerjee D., Bertino J.R. (1998) Isolation and characterization of thymitaq (AG337) and 5-fluoro-2-deoxyuridylate-resistant mutants of human thymidylate synthase from ethyl methanesulfonate-exposed human sarcoma HT1080 cells. J Biol Chem 273 : 11611 11618.
-
(1998)
J Biol Chem
, vol.273
, pp. 11611-11618
-
-
Tong, Y.1
Liu-Chen, X.2
Ercikan-Abali, E.A.3
Capiaux, G.M.4
Zhao, S.C.5
Banerjee, D.6
Bertino, J.R.7
-
37
-
-
0032553309
-
Probing the folate-binding site of human thymidylate synthase by site-directed mutagenesis. Generation of mutants that confer resistance to raltitrexed, Thymitaq, and BW1843U89
-
Tong Y., Liu-Chen X., Ercikan-Abali E.A., Zhao S.C., Banerjee D., Maley F., Bertino J.R. (1998) Probing the folate-binding site of human thymidylate synthase by site-directed mutagenesis. Generation of mutants that confer resistance to raltitrexed, Thymitaq, and BW1843U89. J Biol Chem 273 : 31209 31214.
-
(1998)
J Biol Chem
, vol.273
, pp. 31209-31214
-
-
Tong, Y.1
Liu-Chen, X.2
Ercikan-Abali, E.A.3
Zhao, S.C.4
Banerjee, D.5
Maley, F.6
Bertino, J.R.7
-
38
-
-
0242501573
-
Insights into antifolate resistance from malarial DHFR-TS structures
-
Yuvaniyama J., Chitnumsub P., Kamchonwongpaisan S., Vanichtanankul J., Sirawaraporn W., Taylor P., Walkinshaw M.D., Yuthavong Y. (2003) Insights into antifolate resistance from malarial DHFR-TS structures. Nat Struct Biol 10 : 357 365.
-
(2003)
Nat Struct Biol
, vol.10
, pp. 357-365
-
-
Yuvaniyama, J.1
Chitnumsub, P.2
Kamchonwongpaisan, S.3
Vanichtanankul, J.4
Sirawaraporn, W.5
Taylor, P.6
Walkinshaw, M.D.7
Yuthavong, Y.8
-
39
-
-
24944558791
-
Crystal structure of dihydrofolate reductase from Plasmodium vivax: Pyrimethamine displacement linked with mutation-induced resistance
-
Kongsaeree P., Khongsuk P., Leartsakulpanich U., Chitnumsub P., Tarnchompoo B., Walkinshaw M.D., Yuthavong Y. (2005) Crystal structure of dihydrofolate reductase from Plasmodium vivax: pyrimethamine displacement linked with mutation-induced resistance. Proc Natl Acad Sci U S A 102 : 13046 13051.
-
(2005)
Proc Natl Acad Sci U S a
, vol.102
, pp. 13046-13051
-
-
Kongsaeree, P.1
Khongsuk, P.2
Leartsakulpanich, U.3
Chitnumsub, P.4
Tarnchompoo, B.5
Walkinshaw, M.D.6
Yuthavong, Y.7
-
40
-
-
0037161611
-
Structural studies of the resistance of influenza virus neuramindase to inhibitors
-
Smith B.J., McKimm-Breshkin J.L., McDonald M., Fernley R.T., Varghese J.N., Colman P.M. (2002) Structural studies of the resistance of influenza virus neuramindase to inhibitors. J Med Chem 45 : 2207 2212.
-
(2002)
J Med Chem
, vol.45
, pp. 2207-2212
-
-
Smith, B.J.1
McKimm-Breshkin, J.L.2
McDonald, M.3
Fernley, R.T.4
Varghese, J.N.5
Colman, P.M.6
-
41
-
-
0035190544
-
Comparison of the activities of zanamivir, oseltamivir, and RWJ-270201 against clinical isolates of influenza virus and neuraminidase inhibitor-resistant variants
-
Gubareva L.V., Webster R.G., Hayden F.G. (2001) Comparison of the activities of zanamivir, oseltamivir, and RWJ-270201 against clinical isolates of influenza virus and neuraminidase inhibitor-resistant variants. Antimicrob Agents Chemother 45 : 3403 3408.
-
(2001)
Antimicrob Agents Chemother
, vol.45
, pp. 3403-3408
-
-
Gubareva, L.V.1
Webster, R.G.2
Hayden, F.G.3
|