-
1
-
-
33646873187
-
Will a biological database be different from a biological journal?
-
Bourne,P. (2005) Will a biological database be different from a biological journal? PLoS Comput. Biol., 1, 179-181.
-
(2005)
PLoS Comput. Biol.
, vol.1
, pp. 179-181
-
-
Bourne, P.1
-
2
-
-
0035658264
-
A Web-accessible molecular recognition database
-
Chen,X, Liu,M. and Gilson,M.K. (2002) BindingDB: A Web-accessible molecular recognition database. Comb. Chem. High Throughput Screen, 4, 719-725.
-
(2002)
Comb. Chem. High Throughput Screen
, vol.4
, pp. 719-725
-
-
Chen, X.1
Liu, M.2
Gilson, M.K.3
Binding, D.B.4
-
3
-
-
0036169718
-
The binding database: Data management and interface design
-
Chen,X, Lin,Y., Liu,M. and Gilson,M.K. (2002) The binding database: Data management and interface design. Bioinformatics, 18, 130-139.
-
(2002)
Bioinformatics
, vol.18
, pp. 130-139
-
-
Chen, X.1
Lin, Y.2
Liu, M.3
Gilson, M.K.4
-
4
-
-
14244271762
-
The binding database: Overview and user's guide
-
Chen,X., Liu,M. and Gilson,M.K. (2002) The binding database: Overview and user's guide. Biopolymers/Nucleic Acid Sci., 61, 127-141.
-
(2002)
Biopolymers/Nucleic Acid Sci.
, vol.61
, pp. 127-141
-
-
Chen, X.1
Liu, M.2
Gilson, M.K.3
-
5
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file for macromolecular structures
-
Bernstein,F.C., Koetzle,T.F., Williams,T.F., Meyer,G.J.B.,Jr, Brice,M.D., Rodgers,J.R., Kennard,O., Shimanouchi,T. and Tasumi,M. (1977) The Protein Data Bank: A computer-based archival file for macromolecular structures. J. Mol. Biol., 112, 535-542.
-
(1977)
J. Mol. Biol.
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, T.F.3
Meyer Jr., G.J.B.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
6
-
-
0033954256
-
The protein data bank
-
Berman,H.M., Westhrook,J., Feng,Z., Gilliland,G., Bhat,T.N., Weissig,H., Shindyalov,I.N. and Bourne,P.E. (2000) The protein data bank. Nucleic Acids Res., 28, 235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westhrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
7
-
-
0031803634
-
GPCRDB: An information system for G protein-coupled receptors
-
Horn,F., Weare,J., Beukers,M., Horsch,S., Bairoch,A., Chen,W., Edvardsen,O., Campagne,F. and Vriend,G. (1998) GPCRDB: An information system for G protein-coupled receptors. Nucleic Acids Res., 26, 275-279.
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 275-279
-
-
Horn, F.1
Weare, J.2
Beukers, M.3
Horsch, S.4
Bairoch, A.5
Chen, W.6
Edvardsen, O.7
Campagne, F.8
Vriend, G.9
-
8
-
-
33644875256
-
GLIDA: GPCR-ligand database for chemical genomic drug discovery
-
Okuno,Y., Yang,J., Taneishi,K., Yabuuchi,H. and Tsujimoto,G. (2006) GLIDA: GPCR-ligand database for chemical genomic drug discovery. Nucleic Acids Res., 34, D673-D677.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Okuno, Y.1
Yang, J.2
Taneishi, K.3
Yabuuchi, H.4
Tsujimoto, G.5
-
9
-
-
9544247733
-
Development of KiBank, a database supporting structure-based drug design
-
Zhanga,J., Aizawaa,M., Amaria,S., Iwasawab,Y., Nakanoc,T. and Nakata,K. (2004) Development of KiBank, a database supporting structure-based drug design. Comput. Biol. Chem., 28, 401-407.
-
(2004)
Comput. Biol. Chem.
, vol.28
, pp. 401-407
-
-
Zhanga, J.1
Aizawaa, M.2
Amaria, S.3
Iwasawab, Y.4
Nakanoc, T.5
Nakata, K.6
-
10
-
-
23044480075
-
Binding moad (mother of all databases)
-
Hu,L., Benson,M.L., Smith,R.D., Lerner,M.G. and Carlson,H.A. (2006) Binding moad (mother of all databases). Prot. Struct. Func. Bioinf., 60, 333-340.
-
(2006)
Prot. Struct. Func. Bioinf.
, vol.60
, pp. 333-340
-
-
Hu, L.1
Benson, M.L.2
Smith, R.D.3
Lerner, M.G.4
Carlson, H.A.5
-
11
-
-
2542530042
-
The PDBBind database: Collection of binding affinities for protein-ligand complexes with known three-dimensional structures
-
Wang,R., Fang,X, Lu,Y. and Wang,S. (2004) The PDBBind database: collection of binding affinities for protein-ligand complexes with known three-dimensional structures. J. Med. Chem., 47, 2977-2980.
-
(2004)
J. Med. Chem.
, vol.47
, pp. 2977-2980
-
-
Wang, R.1
Fang, X.2
Lu, Y.3
Wang, S.4
-
12
-
-
20444422149
-
The PDBBind database: Methodologies and updates
-
Wang,R., Fang,X., Lu,Y., Yang,C. and Wang,W. (2005) The PDBBind database: Methodologies and updates. J. Med. Chem., 48, 4111-4119.
-
(2005)
J. Med. Chem.
, vol.48
, pp. 4111-4119
-
-
Wang, R.1
Fang, X.2
Lu, Y.3
Yang, C.4
Wang, W.5
-
13
-
-
33644873904
-
A freely accessible database of affinities for protein-ligand complexes from the PDB
-
Block,P., Sotriffer,C.A., Dramburg,I. and Klebe,G. (2006) AffinDB: A freely accessible database of affinities for protein-ligand complexes from the PDB. Nucleic Acids Res., 34, D522-D526.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Block, P.1
Sotriffer, C.A.2
Dramburg, I.3
Klebe, G.4
Affin, D.B.5
-
14
-
-
33846110991
-
Basic local alignment search tool
-
Altschul,S.F., Gish,W., Miller,W., Myers,E.W. and Lipman,D.J. (1990) Basic local alignment search tool. J. Mol. Biol., 214, 1-8.
-
(1990)
J. Mol. Biol.
, vol.214
, pp. 1-8
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
15
-
-
0023965741
-
SMILES, a chemical language and information-system. 1. Introduction to methodology and encoding rules
-
Weininger,D. (1988) SMILES, a chemical language and information-system. 1. Introduction to methodology and encoding rules. J. Chem. Inf. Comp. Sci., 28, 31-36.
-
(1988)
J. Chem. Inf. Comp. Sci.
, vol.28
, pp. 31-36
-
-
Weininger, D.1
-
16
-
-
0024664539
-
SMILES 2. Algorithm for generation of unique SMILES notation
-
Weininger,D., Weininger,A. and Weininger,J.L. (1989) SMILES 2. Algorithm for generation of unique SMILES notation. J. Chem. Inf. Comp. Sci., 29, 97-101.
-
(1989)
J. Chem. Inf. Comp. Sci.
, vol.29
, pp. 97-101
-
-
Weininger, D.1
Weininger, A.2
Weininger, J.L.3
-
17
-
-
0001611357
-
JChem: Java applets and modules supporting chemical database handling from web browsers
-
Csizmadia,F. (2000) JChem: Java applets and modules supporting chemical database handling from web browsers. J. Chem. Inf. Comput. Sci., 40, 323-324.
-
(2000)
J. Chem. Inf. Comput. Sci.
, vol.40
, pp. 323-324
-
-
Csizmadia, F.1
-
18
-
-
5344244908
-
Chemical similarity searching
-
Willett,P., Barnard,J.M. and Downs,G.M. (1998) Chemical similarity searching. J. Chem. Inf. Comput. Sci., 38, 983-996.
-
(1998)
J. Chem. Inf. Comput. Sci.
, vol.38
, pp. 983-996
-
-
Willett, P.1
Barnard, J.M.2
Downs, G.M.3
-
19
-
-
13844312649
-
ZINC - A free database of commercially available compounds for virtual screening
-
Irwin,J.J. and Shoichet,B.K. (2005) ZINC - a free database of commercially available compounds for virtual screening. J. Chem. Inf. Model, 45, 177-182.
-
(2005)
J. Chem. Inf. Model
, vol.45
, pp. 177-182
-
-
Irwin, J.J.1
Shoichet, B.K.2
-
20
-
-
0035438388
-
Prediction of biological activity for high-throughput screening using binary kernel discrimination
-
Harper,G., Bradshaw,J., Gittins,J.C., Green,D.V. and Leach,A.R.J. (2001) Prediction of biological activity for high-throughput screening using binary kernel discrimination. J. Chem. Inf. Comput. Sci., 41, 1295-1300.
-
(2001)
J. Chem. Inf. Comput. Sci.
, vol.41
, pp. 1295-1300
-
-
Harper, G.1
Bradshaw, J.2
Gittins, J.C.3
Green, D.V.4
Leach, A.R.J.5
-
21
-
-
20444410410
-
Virtual screening of molecular databases using a Support Vector Machine
-
Jorissen,R.N. and Gilson,M.K. (2005) Virtual screening of molecular databases using a Support Vector Machine. J. Chem. Inf. Model, 45, 569-561.
-
(2005)
J. Chem. Inf. Model
, vol.45
, pp. 561-569
-
-
Jorissen, R.N.1
Gilson, M.K.2
-
22
-
-
0003710380
-
LIBSVM: A library for support vector machines 2001
-
Software available at
-
Chang,C.-C. and Lin,C.-J. LIBSVM: A library for support vector machines 2001. Software available at http://www.csie.ntu.edu.tw/~cjfin/libsvm.
-
-
-
Chang, C.-C.1
Lin, C.-J.2
|