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Volumn 7, Issue 1, 2009, Pages

Concatenated analysis sheds light on early metazoan evolution and fuels a modern "urmetazoon" hypothesis

Author keywords

[No Author keywords available]

Indexed keywords

CONCATENATED DNA; MITOCHONDRIAL DNA; RIBOSOME DNA; RNA 18S;

EID: 58849142045     PISSN: 15449173     EISSN: 15457885     Source Type: Journal    
DOI: 10.1371/journal.pbio.1000020     Document Type: Article
Times cited : (216)

References (70)
  • 2
    • 0000316734 scopus 로고
    • Bemerkungen zur Gastraea-Theorie.
    • Bütschli O (1884) Bemerkungen zur Gastraea-Theorie. Morph Jahrb 9: 415-427.
    • (1884) Morph Jahrb , vol.9 , pp. 415-427
    • Bütschli, O.1
  • 3
    • 58849097783 scopus 로고    scopus 로고
    • Gruner HE (1993) Einführung, Protozoa, Placozoa, Porifera.Kaestner A, editor. Lehrbuch der Speziellen Zoologie Band I. Jena (Germany): G. Fischer. pp. 62-72.
    • Gruner HE (1993) Einführung, Protozoa, Placozoa, Porifera.Kaestner A, editor. Lehrbuch der Speziellen Zoologie Band I. Jena (Germany): G. Fischer. pp. 62-72.
  • 4
    • 14944376241 scopus 로고
    • Trichoplax adhaerens and the problem of the origin of Metazoa
    • Ivanov AV (1973) Trichoplax adhaerens and the problem of the origin of Metazoa. Doklady Akad Nauk SSSR Ser Biol 211: 1469-1471.
    • (1973) Doklady Akad Nauk SSSR Ser Biol , vol.211 , pp. 1469-1471
    • Ivanov, A.V.1
  • 5
    • 0037001277 scopus 로고    scopus 로고
    • Trichoplax adhaerens: Discovered as a missing link, forgotten as a hydrozoan, re-discovered as a key to metazoan evolution
    • Syed T, Schierwater B (2002) Trichoplax adhaerens: discovered as a missing link, forgotten as a hydrozoan, re-discovered as a key to metazoan evolution. Vie Milieu 52: 177-187.
    • (2002) Vie Milieu , vol.52 , pp. 177-187
    • Syed, T.1    Schierwater, B.2
  • 6
    • 3843090680 scopus 로고    scopus 로고
    • Molecular phylogeny of Demospongiae: Implications for classification and scenarios of character evolution
    • Borchiellini C, Chombard C, Manuel M, Alivon E, Vacelet J, et al. (2004) Molecular phylogeny of Demospongiae: implications for classification and scenarios of character evolution. Mol Phylogenet Evol 32: 823-837.
    • (2004) Mol Phylogenet Evol , vol.32 , pp. 823-837
    • Borchiellini, C.1    Chombard, C.2    Manuel, M.3    Alivon, E.4    Vacelet, J.5
  • 7
    • 0032433340 scopus 로고    scopus 로고
    • Evaluating multiple alternative hypotheses for the origin of Bilateria: An analysis of 18S rRNA molecular evidence
    • Collins A (1998) Evaluating multiple alternative hypotheses for the origin of Bilateria: an analysis of 18S rRNA molecular evidence. Proc Natl Acad Sci U S A 95: 15458-15463.
    • (1998) Proc Natl Acad Sci U S A , vol.95 , pp. 15458-15463
    • Collins, A.1
  • 8
    • 0037229216 scopus 로고    scopus 로고
    • Placozoa are not derived cnidarians: Evidence from molecular morphology
    • Ender A, Schierwater B (2003) Placozoa are not derived cnidarians: evidence from molecular morphology. Mol Biol Evol 20: 130-134.
    • (2003) Mol Biol Evol , vol.20 , pp. 130-134
    • Ender, A.1    Schierwater, B.2
  • 9
    • 0038487295 scopus 로고    scopus 로고
    • Phylogeny and evolution of calcareous sponges: Monophyly of calcinea and calcaronea, high level of morphological homoplasy, and the primitive nature of axial symmetry
    • Manuel M, Borchiellini C, Alivon E, Le Parco Y, Vacelet J, et al. (2003) Phylogeny and evolution of calcareous sponges: monophyly of calcinea and calcaronea, high level of morphological homoplasy, and the primitive nature of axial symmetry. Syst Biol 52: 311-333.
    • (2003) Syst Biol , vol.52 , pp. 311-333
    • Manuel, M.1    Borchiellini, C.2    Alivon, E.3    Le Parco, Y.4    Vacelet, J.5
  • 10
    • 35448973309 scopus 로고    scopus 로고
    • Can we ever identify the Urmetazoan?
    • Schierwater B, DeSalle R (2007) Can we ever identify the Urmetazoan? Integr Comp Biol 47: 670-676.
    • (2007) Integr Comp Biol , vol.47 , pp. 670-676
    • Schierwater, B.1    DeSalle, R.2
  • 11
    • 0000402051 scopus 로고
    • Die Ultrastruktur von Trichoplax adhaerens F.E. Schulze
    • Grell KG, Benwitz G (1971) Die Ultrastruktur von Trichoplax adhaerens F.E. Schulze. Cytobiologie 4: 216-240.
    • (1971) Cytobiologie , vol.4 , pp. 216-240
    • Grell, K.G.1    Benwitz, G.2
  • 12
    • 0002418008 scopus 로고
    • Trichoplax adhaerens and the origin of Metazoa
    • Rome: Accademia nazionale dei Lincei. pp
    • Grell KG (1981) Trichoplax adhaerens and the origin of Metazoa. Origine dei grandi phyla dei Metazoi, Convegno Intern. Rome: Accademia nazionale dei Lincei. pp. 107-121.
    • (1981) Origine dei grandi phyla dei Metazoi, Convegno Intern , pp. 107-121
    • Grell, K.G.1
  • 13
    • 0017393470 scopus 로고    scopus 로고
    • Ruthmann A (1977) Cell differentiation, DNA content and chromosomes of Trichoplax adhaerens F. E. Schulze. Cytobiologie 15: 58-64.
    • Ruthmann A (1977) Cell differentiation, DNA content and chromosomes of Trichoplax adhaerens F. E. Schulze. Cytobiologie 15: 58-64.
  • 14
    • 27344444960 scopus 로고
    • DNA-content and fragmentation of the egg-nucleus of Trichoplax adhaerens
    • Ruthmann A, Grell KG, Benwitz G (1981) DNA-content and fragmentation of the egg-nucleus of Trichoplax adhaerens. Z Naturforsch 60: 564-567.
    • (1981) Z Naturforsch , vol.60 , pp. 564-567
    • Ruthmann, A.1    Grell, K.G.2    Benwitz, G.3
  • 15
    • 56949099961 scopus 로고    scopus 로고
    • Placozoa and the evolution of Metazoa and intrasomatic cell differentiation
    • Schierwater B, de Jong D, Desalle R (2008) Placozoa and the evolution of Metazoa and intrasomatic cell differentiation. Int J Biochem Cell Biol 41: 370-379.
    • (2008) Int J Biochem Cell Biol , vol.41 , pp. 370-379
    • Schierwater, B.1    de Jong, D.2    Desalle, R.3
  • 16
    • 0001837934 scopus 로고
    • nov. gen. nov. spec. Zool Anz
    • Schulze FE (1883) Trichoplax adhaerens nov. gen. nov. spec. Zool Anz 6: 92-97.
    • (1883) Trichoplax adhaerens , vol.6 , pp. 92-97
    • Schulze, F.E.1
  • 17
    • 0003633872 scopus 로고
    • Jena Germany, Gustav Fischer, pp
    • Ax P (1995) Das System der Metazoa I. Jena (Germany): Gustav Fischer. 77-79 pp.
    • (1995) Das System der Metazoa I , pp. 77-79
    • Ax, P.1
  • 18
    • 0041915547 scopus 로고    scopus 로고
    • Molecular evidence of regression in evolution of metazoa
    • Aleshin VV, Petrov NB (2002) Molecular evidence of regression in evolution of metazoa. Zh Obshch Biol 63: 195-208.
    • (2002) Zh Obshch Biol , vol.63 , pp. 195-208
    • Aleshin, V.V.1    Petrov, N.B.2
  • 19
    • 0345016261 scopus 로고    scopus 로고
    • The evolution of multicellularity and early animal genomes
    • Brooke NM, Holland PW (2003) The evolution of multicellularity and early animal genomes. Curr Opin Genet Dev 13: 599-603.
    • (2003) Curr Opin Genet Dev , vol.13 , pp. 599-603
    • Brooke, N.M.1    Holland, P.W.2
  • 20
    • 0036359722 scopus 로고    scopus 로고
    • Relationships among metazoan phyla as inferred from 18S rRNA sequence data: A methodological approach
    • Giribet G (2002) Relationships among metazoan phyla as inferred from 18S rRNA sequence data: a methodological approach. EXS 92: 85-101.
    • (2002) EXS , vol.92 , pp. 85-101
    • Giribet, G.1
  • 21
    • 0035859814 scopus 로고    scopus 로고
    • Evaluating hypotheses of basal animal phylogeny using complete sequences of large and small subunit rRNA
    • Medina M, Collins AG, Silberman JD, Sogin ML (2001) Evaluating hypotheses of basal animal phylogeny using complete sequences of large and small subunit rRNA. Proc Natl Acad Sci U S A 98: 9707-9712.
    • (2001) Proc Natl Acad Sci U S A , vol.98 , pp. 9707-9712
    • Medina, M.1    Collins, A.G.2    Silberman, J.D.3    Sogin, M.L.4
  • 22
    • 0033531127 scopus 로고    scopus 로고
    • Evolutionary relationships of Metazoa within the eukaryotes based on molecular data from Porifera
    • Schutze J, Krasko A, Custodio MR, Efremova SM, Müller IM, et al. (1999) Evolutionary relationships of Metazoa within the eukaryotes based on molecular data from Porifera. Proc R Soc Lond B Biol Sci 266: 63-73.
    • (1999) Proc R Soc Lond B Biol Sci , vol.266 , pp. 63-73
    • Schutze, J.1    Krasko, A.2    Custodio, M.R.3    Efremova, S.M.4    Müller, I.M.5
  • 24
    • 0027241482 scopus 로고
    • Monophyletic origins of the metazoa: An evolutionary link with fungi
    • Wainright PO, Hinkle G, Sogin ML, Stickel SK (1993) Monophyletic origins of the metazoa: an evolutionary link with fungi. Science 260: 340-342.
    • (1993) Science , vol.260 , pp. 340-342
    • Wainright, P.O.1    Hinkle, G.2    Sogin, M.L.3    Stickel, S.K.4
  • 25
    • 42149157760 scopus 로고    scopus 로고
    • Broad phylogenomic sampling improves resolution of the animal tree of life
    • Dunn CW, Hejnol A, Matus DQ, Pang K, Browne WE, et al. (2008) Broad phylogenomic sampling improves resolution of the animal tree of life. Nature 452: 745-749.
    • (2008) Nature , vol.452 , pp. 745-749
    • Dunn, C.W.1    Hejnol, A.2    Matus, D.Q.3    Pang, K.4    Browne, W.E.5
  • 27
    • 33745021824 scopus 로고    scopus 로고
    • Mitochondrial genome of Trichoplax adhaerens supports Placozoa as the basal lower metazoan phylum
    • Dellaporta SL, Xu A, Sagasser S, Jakob W, Moreno MA, et al. (2006) Mitochondrial genome of Trichoplax adhaerens supports Placozoa as the basal lower metazoan phylum. Proc Natl Acad Sci U S A 103: 8751-8756.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 8751-8756
    • Dellaporta, S.L.1    Xu, A.2    Sagasser, S.3    Jakob, W.4    Moreno, M.A.5
  • 28
    • 17744381377 scopus 로고    scopus 로고
    • Mitochondrial genomes of two demosponges provide insights into an early stage of animal evolution
    • Lavrov DV, Forget L, Kelly M, Lang BF (2005) Mitochondrial genomes of two demosponges provide insights into an early stage of animal evolution. Mol Biol Evol 22: 1231-1239.
    • (2005) Mol Biol Evol , vol.22 , pp. 1231-1239
    • Lavrov, D.V.1    Forget, L.2    Kelly, M.3    Lang, B.F.4
  • 29
    • 33846557231 scopus 로고    scopus 로고
    • Comparative genomics of large mitochondria in placozoans
    • doi:10.1371/journal.pgen. 0030013
    • Signorovitch AY, Buss LW, Dellaporta SL (2007) Comparative genomics of large mitochondria in placozoans. PLoS Genet 3: e13. doi:10.1371/journal.pgen. 0030013
    • (2007) PLoS Genet , vol.3
    • Signorovitch, A.Y.1    Buss, L.W.2    Dellaporta, S.L.3
  • 30
    • 17844372497 scopus 로고    scopus 로고
    • The role of Cnidaria in evolution and ecology
    • Boero F, Bouillon J, Piraino S (2005) The role of Cnidaria in evolution and ecology. Ital J Zool 72: 65-71.
    • (2005) Ital J Zool , vol.72 , pp. 65-71
    • Boero, F.1    Bouillon, J.2    Piraino, S.3
  • 31
    • 0001769903 scopus 로고    scopus 로고
    • The cnidarian premises of metazoan evolution: From triploblasty, to coelom formation, to metamery
    • Boero F, Gravili C, Pagliara P, Piraino S, Bouillon J, et al. (1998) The cnidarian premises of metazoan evolution: from triploblasty, to coelom formation, to metamery. Ital J Zool 65: 5-9.
    • (1998) Ital J Zool , vol.65 , pp. 5-9
    • Boero, F.1    Gravili, C.2    Pagliara, P.3    Piraino, S.4    Bouillon, J.5
  • 32
    • 20344368795 scopus 로고    scopus 로고
    • Evolution of striated muscle: Jellyfish and the origin of triploblasty
    • Seipel K, Schmid V (2005) Evolution of striated muscle: jellyfish and the origin of triploblasty. Dev Biol 282: 14-26.
    • (2005) Dev Biol , vol.282 , pp. 14-26
    • Seipel, K.1    Schmid, V.2
  • 33
    • 33749597772 scopus 로고    scopus 로고
    • Mesodermal anatomies in cnidarian polyps and medusae
    • Seipel K, Schmid V (2006) Mesodermal anatomies in cnidarian polyps and medusae. Int J Dev Biol 50: 589-599.
    • (2006) Int J Dev Biol , vol.50 , pp. 589-599
    • Seipel, K.1    Schmid, V.2
  • 34
    • 0026640745 scopus 로고
    • Class-level relationships in the phylum Cnidaria: Evidence from mitochondrial genome structure
    • Bridge D, Cunningham CW, Schierwater B, DeSalle R, Buss LW (1992) Class-level relationships in the phylum Cnidaria: evidence from mitochondrial genome structure. Proc Nat Acad Sci U S A 89: 8750-8753.
    • (1992) Proc Nat Acad Sci U S A , vol.89 , pp. 8750-8753
    • Bridge, D.1    Cunningham, C.W.2    Schierwater, B.3    DeSalle, R.4    Buss, L.W.5
  • 35
    • 33644600635 scopus 로고    scopus 로고
    • Medusozoan phylogeny and character evolution clarified by new large and small subunit rDNA data and an assessment of the utility of phylogenetic mixture models
    • Collins AG, Schuchert P, Marques A, Jankowski T, Medina M, et al. (2006) Medusozoan phylogeny and character evolution clarified by new large and small subunit rDNA data and an assessment of the utility of phylogenetic mixture models. Syst Biol 55: 97-115.
    • (2006) Syst Biol , vol.55 , pp. 97-115
    • Collins, A.G.1    Schuchert, P.2    Marques, A.3    Jankowski, T.4    Medina, M.5
  • 36
    • 0036139287 scopus 로고    scopus 로고
    • CONSEL: For assessing the confidence of phylogenetic tree selection
    • Shimodaira H, Hasegawa M (2001) CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics 17: 1246-1247.
    • (2001) Bioinformatics , vol.17 , pp. 1246-1247
    • Shimodaira, H.1    Hasegawa, M.2
  • 37
    • 0032766857 scopus 로고    scopus 로고
    • Multiple comparisons of log-likelihoods with applications to phylogenetic inference
    • Shimodaira H, Hasegawa M (1999) Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol Biol Evol 16: 1114-1116.
    • (1999) Mol Biol Evol , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hasegawa, M.2
  • 38
    • 33845908745 scopus 로고    scopus 로고
    • Lack of resolution in the animal phylogeny: Closely spaced cladogeneses or undetected systematic errors?
    • Baurain D, Brinkmann H, Philippe H (2006) Lack of resolution in the animal phylogeny: closely spaced cladogeneses or undetected systematic errors? Mol Biol Evol 24: 6-9.
    • (2006) Mol Biol Evol , vol.24 , pp. 6-9
    • Baurain, D.1    Brinkmann, H.2    Philippe, H.3
  • 39
    • 33749516796 scopus 로고    scopus 로고
    • Large-scale sequencing and the new animal phylogeny
    • Philippe H, Telford MJ (2006) Large-scale sequencing and the new animal phylogeny. Trends Ecol Evol 21: 614-620.
    • (2006) Trends Ecol Evol , vol.21 , pp. 614-620
    • Philippe, H.1    Telford, M.J.2
  • 41
    • 33751039720 scopus 로고    scopus 로고
    • Bushes in the tree of life
    • doi:10.1371/journal.pbio.0040352
    • Rokas A, Carroll SB (2006) Bushes in the tree of life. PLoS Biol 4: e352. doi:10.1371/journal.pbio.0040352
    • (2006) PLoS Biol , vol.4
    • Rokas, A.1    Carroll, S.B.2
  • 42
    • 29344441657 scopus 로고    scopus 로고
    • Animal evolution and the molecular signature of radiations compressed in time
    • Rokas A, Kruger D, Carroll SB (2006) Animal evolution and the molecular signature of radiations compressed in time. Science 310: 1933-1938.
    • (2006) Science , vol.310 , pp. 1933-1938
    • Rokas, A.1    Kruger, D.2    Carroll, S.B.3
  • 43
    • 35449001198 scopus 로고    scopus 로고
    • Key transitions in animal evolution
    • DeSalle R, Schierwater B (2007) Key transitions in animal evolution. Integr Comp Biol 47: 667-669.
    • (2007) Integr Comp Biol , vol.47 , pp. 667-669
    • DeSalle, R.1    Schierwater, B.2
  • 44
    • 0036380494 scopus 로고    scopus 로고
    • Is the evolution of Cnox-2 Hox/ParaHox genes "multicolored" and "polygenealogical"?
    • Schierwater B, Dellaporta S, DeSalle R (2002) Is the evolution of Cnox-2 Hox/ParaHox genes "multicolored" and "polygenealogical"? Mol Phylogenet Evol 24: 374-378.
    • (2002) Mol Phylogenet Evol , vol.24 , pp. 374-378
    • Schierwater, B.1    Dellaporta, S.2    DeSalle, R.3
  • 46
    • 2542505487 scopus 로고    scopus 로고
    • The Trox-2 Hox/ParaHox gene of Trichoplax (Placozoa) marks an epithelial boundary
    • Jakob W, Sagasser S., Dellaporta SL, Holland PW, Kuhn K, et al. (2004) The Trox-2 Hox/ParaHox gene of Trichoplax (Placozoa) marks an epithelial boundary. Dev Genes Evol 214: 170-175.
    • (2004) Dev Genes Evol , vol.214 , pp. 170-175
    • Jakob, W.1    Sagasser, S.2    Dellaporta, S.L.3    Holland, P.W.4    Kuhn, K.5
  • 47
    • 35449003649 scopus 로고    scopus 로고
    • A food's-eye view of the transition from basal metazoans to bilaterians
    • Blackstone NW (2007) A food's-eye view of the transition from basal metazoans to bilaterians. Integr Comp Biol 47: 724-733.
    • (2007) Integr Comp Biol , vol.47 , pp. 724-733
    • Blackstone, N.W.1
  • 48
    • 35448934897 scopus 로고    scopus 로고
    • Implications of cnidarian gene expression patterns for the origins of bilaterality - is the glass half full or half empty?
    • Ball EE, de Jong DM, Schierwater B, Shinzato C, Hayward DC, et al. (2007) Implications of cnidarian gene expression patterns for the origins of bilaterality - is the glass half full or half empty? Integr Comp Biol 47: 701-711.
    • (2007) Integr Comp Biol , vol.47 , pp. 701-711
    • Ball, E.E.1    de Jong, D.M.2    Schierwater, B.3    Shinzato, C.4    Hayward, D.C.5
  • 50
    • 34548537892 scopus 로고    scopus 로고
    • Poriferan ANTP genes: Primitively simple or secondarily reduced?
    • Peterson KJ, Sperling EA (2007) Poriferan ANTP genes: primitively simple or secondarily reduced? Evol Dev 9: 405-408.
    • (2007) Evol Dev , vol.9 , pp. 405-408
    • Peterson, K.J.1    Sperling, E.A.2
  • 51
    • 0036057306 scopus 로고    scopus 로고
    • The evolution of the Placozoa: A new morphological model
    • Syed T, Schierwater B (2002) The evolution of the Placozoa: a new morphological model. Senckenbergiana lethaea 82: 315-324.
    • (2002) Senckenbergiana lethaea , vol.82 , pp. 315-324
    • Syed, T.1    Schierwater, B.2
  • 53
    • 13744252890 scopus 로고    scopus 로고
    • MAFFT version 5: Improvement in accuracy of multiple sequence alignment
    • Katoh K, Kuma K, Toh H, Miyata T (2005) MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res 33: 511-518.
    • (2005) Nucleic Acids Res , vol.33 , pp. 511-518
    • Katoh, K.1    Kuma, K.2    Toh, H.3    Miyata, T.4
  • 54
    • 58849086867 scopus 로고    scopus 로고
    • Swofford DL (2003) PAUP*: phylogenetic analysis using parsimony (*and other methods, version 4 [computer program, Sunderland Massachusetts, Sinauer Associates
    • Swofford DL (2003) PAUP*: phylogenetic analysis using parsimony (*and other methods), version 4 [computer program]. Sunderland (Massachusetts): Sinauer Associates.
  • 55
    • 0026656815 scopus 로고
    • Exhaustive matching of the entire protein sequence database
    • Gonnet GH, Cohen MA, Benner SA (1992) Exhaustive matching of the entire protein sequence database. Science 256: 1443-1445.
    • (1992) Science , vol.256 , pp. 1443-1445
    • Gonnet, G.H.1    Cohen, M.A.2    Benner, S.A.3
  • 56
    • 0035031966 scopus 로고    scopus 로고
    • A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach
    • Whelan S, Goldman N (2001) A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approach. Mol Biol Evol 18: 691-699.
    • (2001) Mol Biol Evol , vol.18 , pp. 691-699
    • Whelan, S.1    Goldman, N.2
  • 57
    • 45849154166 scopus 로고    scopus 로고
    • An improved general amino acid replacement matrix
    • Le SQ, Gascuel O (2008) An improved general amino acid replacement matrix. Mol Biol Evol 25: 1307-1320.
    • (2008) Mol Biol Evol , vol.25 , pp. 1307-1320
    • SQ, L.1    Gascuel, O.2
  • 58
    • 0000367652 scopus 로고
    • The limits of amino-acid sequence data in Angiosperm phylogenetic reconstruction
    • Bremer K (1988) The limits of amino-acid sequence data in Angiosperm phylogenetic reconstruction. Evolution 42: 795-803.
    • (1988) Evolution , vol.42 , pp. 795-803
    • Bremer, K.1
  • 59
    • 0031371067 scopus 로고    scopus 로고
    • Multiple sources of character information and the phylogeny of Hawaiian drosophilids
    • Baker RH, DeSalle R (1997) Multiple sources of character information and the phylogeny of Hawaiian drosophilids. Syst Biol 46: 654-673.
    • (1997) Syst Biol , vol.46 , pp. 654-673
    • Baker, R.H.1    DeSalle, R.2
  • 60
    • 0032088099 scopus 로고    scopus 로고
    • Assessing the relative contribution of molecular and morphological characters in simultaneous analysis trees
    • Baker RH, Yu X, DeSalle R (1998) Assessing the relative contribution of molecular and morphological characters in simultaneous analysis trees. Mol Phylogenet Evol 9: 427-436.
    • (1998) Mol Phylogenet Evol , vol.9 , pp. 427-436
    • Baker, R.H.1    Yu, X.2    DeSalle, R.3
  • 61
    • 58849120679 scopus 로고    scopus 로고
    • Sorenson MD, Franzosa EA (2007) TreeRot, version 3 [computer program, Boston: Boston University
    • Sorenson MD, Franzosa EA (2007) TreeRot, version 3 [computer program]. Boston: Boston University.
  • 62
    • 1342309210 scopus 로고    scopus 로고
    • Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference
    • Altekar G, Dwarkadas S, Huelsenbeck JP, Ronquist F (2004) Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inference. Bioinformatics 20: 407-415.
    • (2004) Bioinformatics , vol.20 , pp. 407-415
    • Altekar, G.1    Dwarkadas, S.2    Huelsenbeck, J.P.3    Ronquist, F.4
  • 63
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • Ronquist F, Huelsenbeck JP (2003) MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574.
    • (2003) Bioinformatics , vol.19 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 64
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • Stamatakis A (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690.
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1
  • 65
    • 0021277009 scopus 로고
    • A new method for calculating evolutionary substitution rates
    • Lanave C, Preparata G, Saccone C, Serio G (1984) A new method for calculating evolutionary substitution rates. J Mol Evol 20: 86-93.
    • (1984) J Mol Evol , vol.20 , pp. 86-93
    • Lanave, C.1    Preparata, G.2    Saccone, C.3    Serio, G.4
  • 66
    • 0025267792 scopus 로고
    • The general stochastic model of nucleotide substitution
    • Rodriguez F, Oliver JL, Marin A, Medina JR (1990) The general stochastic model of nucleotide substitution. J Theor Biol 142: 485-501.
    • (1990) J Theor Biol , vol.142 , pp. 485-501
    • Rodriguez, F.1    Oliver, J.L.2    Marin, A.3    Medina, J.R.4
  • 67
    • 0028064845 scopus 로고
    • Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: Approximate methods
    • Yang Z (1994) Maximum likelihood phylogenetic estimation from DNA sequences with variable rates over sites: approximate methods. J Mol Evol 39: 306-314.
    • (1994) J Mol Evol , vol.39 , pp. 306-314
    • Yang, Z.1
  • 68
    • 0027132974 scopus 로고
    • Maximum-Likelihood estimation of phylogeny from DNA-sequences when substitution rates differ over sites
    • Yang ZH (1993) Maximum-Likelihood estimation of phylogeny from DNA-sequences when substitution rates differ over sites. Mol Biol Evol 10: 1396-1401.
    • (1993) Mol Biol Evol , vol.10 , pp. 1396-1401
    • Yang, Z.H.1
  • 69
    • 50249100595 scopus 로고    scopus 로고
    • A rapid bootstrap algorithm for the RAxML web servers
    • Stamatakis A, Hoover P, Rougemont J (2008) A rapid bootstrap algorithm for the RAxML web servers, Syst Biol 57: 758-771.
    • (2008) Syst Biol , vol.57 , pp. 758-771
    • Stamatakis, A.1    Hoover, P.2    Rougemont, J.3
  • 70
    • 41049111540 scopus 로고    scopus 로고
    • Inferring confidence sets of possibly misspecified gene trees
    • Strimmer K, Rambaut A (2002) Inferring confidence sets of possibly misspecified gene trees. Proc R Soc Lond B Biol Sci 269: 137-142.
    • (2002) Proc R Soc Lond B Biol Sci , vol.269 , pp. 137-142
    • Strimmer, K.1    Rambaut, A.2


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