CONSEL: For assessing the confidence of phylogenetic tree selection

Bioinformatics

Volumn 17, Issue 12, 2002, Pages 1246-1247

  Shimodaira, H ^a   Hasegawa, M ^a  

^a INSTITUTE OF STATISTICAL MATHEMATICS   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CALCULATION; COMPUTER PROGRAM; CONTROLLED STUDY; PHYLOGENETIC TREE; PRIORITY JOURNAL; PROBABILITY;

EID: 0036139287     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/17.12.1246     Document Type: Article

References (21)

1. MOLPHY version 2.3: Programs for molecular phylogenetics based on maximum likelihood
2. Evaluating hypotheses on the origin and evolution of the New Zealand alpine cicadas (Maoricicada) using multiple-comparison tests of tree topology
3. Bootstrap methods: Another look at the jackknife
4. Bootstrap confidence intervals for a class of parametric problems
5. The problem of regions
6. Bootstrap confidence levels for phylogenetic trees
7. Evolutionary trees from DNA sequences: A maximum likelihood approach
8. Confidence limits on phylogenies: An approach using the bootstrap
9. Likelihood-based tests of topologies in phylogenetics
10. Accuracies of the simple methods for estimating the bootstrap probability of a maximum likelihood tree
11. Evaluation of the maximum likelihood estimate of the evolutionary tree topologies from DNA sequence data, and the branching order in Hominoidea
12. Maximum likelihood inference of protein phylogeny and the origin of chloroplasts
13. A model search technique based on confidence set and map of models
14. An application of multiple comparison techniques to model selection
15. Another calculation of the p-value for the problem of regions using the scaled bootstrap resamplings
16. Multiple comparisons of log-likelihoods and combining nonnested models with applications to phylogenetic tree selection
17. Assessing the confidence of phylogenetic tree selection
18. Multiple comparisons of log-likelihoods with applications to phylogenetic inference
19. PAUP*. Phylogenetic Analysis Using Parsimony (*and other methods)
20. PAML: A program package for phylogenetic analysis by maximum likelihood
21. Estimation of confidence in phylogeny: The complete-and-partial bootstrap technique