-
1
-
-
33845332038
-
Modeling heme proteins using atomistic simulations
-
Bikiel D.E., Boechi L., Capece L., Crespo A., De Biase P.M., Di Lella S., González Lebrero M.C., Martí M.A., Nadra A.D., Perissinotti L.L., Scherlis D.A., and Estrin D.A. Modeling heme proteins using atomistic simulations. Phys. Chem. Chem. Phys. 8 (2006) 5611-5628
-
(2006)
Phys. Chem. Chem. Phys.
, vol.8
, pp. 5611-5628
-
-
Bikiel, D.E.1
Boechi, L.2
Capece, L.3
Crespo, A.4
De Biase, P.M.5
Di Lella, S.6
González Lebrero, M.C.7
Martí, M.A.8
Nadra, A.D.9
Perissinotti, L.L.10
Scherlis, D.A.11
Estrin, D.A.12
-
3
-
-
0028276741
-
Femtosecond spectroscopy of ligand rebinding in heme proteins
-
Martin J.-L., and Vos M.H. Femtosecond spectroscopy of ligand rebinding in heme proteins. Methods Enzymol. 232 (1994) 416-430
-
(1994)
Methods Enzymol.
, vol.232
, pp. 416-430
-
-
Martin, J.-L.1
Vos, M.H.2
-
4
-
-
0029894282
-
Kinetic pathways and barriers for ligand binding to myoglobin
-
Olson J.S., and Phillips Jr. G.N. Kinetic pathways and barriers for ligand binding to myoglobin. J. Biol. Chem. 271 (1996) 17593-17596
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 17593-17596
-
-
Olson, J.S.1
Phillips Jr., G.N.2
-
6
-
-
0035029253
-
Heme photolysis occurs by ultrafast excited state metal-to-ring charge transfer
-
Franzen S., Kiger L., Poyart C., and Martin J.-L. Heme photolysis occurs by ultrafast excited state metal-to-ring charge transfer. Biophys. J. 80 (2001) 2372-2385
-
(2001)
Biophys. J.
, vol.80
, pp. 2372-2385
-
-
Franzen, S.1
Kiger, L.2
Poyart, C.3
Martin, J.-L.4
-
7
-
-
0023919078
-
Photophysics and reactivity of heme proteins: a femtosecond absorption study of hemoglobin, myoglobin and protoheme
-
Petrich J.W., Poyart C., and Martin J.-L. Photophysics and reactivity of heme proteins: a femtosecond absorption study of hemoglobin, myoglobin and protoheme. Biochemistry 27 (1988) 4049-4060
-
(1988)
Biochemistry
, vol.27
, pp. 4049-4060
-
-
Petrich, J.W.1
Poyart, C.2
Martin, J.-L.3
-
8
-
-
33746042625
-
Computer simulations of structures, energetics and dynamics of myoglobin center...ligand complexes
-
Danielsson J., Banushkina P., Nutt D.R., and Meuwly M. Computer simulations of structures, energetics and dynamics of myoglobin center...ligand complexes. Int. Rev. Phys. Chem. 25 (2006) 407-425
-
(2006)
Int. Rev. Phys. Chem.
, vol.25
, pp. 407-425
-
-
Danielsson, J.1
Banushkina, P.2
Nutt, D.R.3
Meuwly, M.4
-
9
-
-
0028408155
-
Direct evidence for the role of haem doming as the primary event in the cooperative transition of haemoglobin
-
Franzen S., Lambry J.-C., Bohn B., Poyart C., and Martin J.-L. Direct evidence for the role of haem doming as the primary event in the cooperative transition of haemoglobin. Nat. Struct. Biol. 1 (1994) 230-233
-
(1994)
Nat. Struct. Biol.
, vol.1
, pp. 230-233
-
-
Franzen, S.1
Lambry, J.-C.2
Bohn, B.3
Poyart, C.4
Martin, J.-L.5
-
10
-
-
0028927331
-
Evidence for sub-picosecond heme doming in hemoglobin and myoglobin: a time-resolved resonance Raman comparison of carbonmonoxy and deoxy species
-
Franzen S., Bohn B., Poyart C., and Martin J.-L. Evidence for sub-picosecond heme doming in hemoglobin and myoglobin: a time-resolved resonance Raman comparison of carbonmonoxy and deoxy species. Biochemistry 34 (1995) 1224-1237
-
(1995)
Biochemistry
, vol.34
, pp. 1224-1237
-
-
Franzen, S.1
Bohn, B.2
Poyart, C.3
Martin, J.-L.4
-
11
-
-
34250681839
-
Subpicosecond oxygen trapping in the heme pocket of the oxygen sensor FixL observed by time-resolved resonance Raman spectroscopy
-
Kruglik S.G., Jasaitis A., Hola K., Yamashita T., Liebl U., Martin J.-L., and Vos M.H. Subpicosecond oxygen trapping in the heme pocket of the oxygen sensor FixL observed by time-resolved resonance Raman spectroscopy. Proc. Natl. Acad. Sci. U. S. A. 104 (2007) 7408-7413
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 7408-7413
-
-
Kruglik, S.G.1
Jasaitis, A.2
Hola, K.3
Yamashita, T.4
Liebl, U.5
Martin, J.-L.6
Vos, M.H.7
-
12
-
-
0021111948
-
Geminate recombination of carbon monoxide to myoglobin
-
Henry E.R., Sommer J.H., Hofrichter J., Eaton W.A., and Gellert M. Geminate recombination of carbon monoxide to myoglobin. J. Mol. Biol. 166 (1983) 443-451
-
(1983)
J. Mol. Biol.
, vol.166
, pp. 443-451
-
-
Henry, E.R.1
Sommer, J.H.2
Hofrichter, J.3
Eaton, W.A.4
Gellert, M.5
-
13
-
-
0018024764
-
Carboxylation kinetics of hemoglobin and myoglobin: linear transient response to step perturbation by laser photolysis
-
Schuresko D.D., and Webb W.W. Carboxylation kinetics of hemoglobin and myoglobin: linear transient response to step perturbation by laser photolysis. Biophys. J. 24 (1978) 382-383
-
(1978)
Biophys. J.
, vol.24
, pp. 382-383
-
-
Schuresko, D.D.1
Webb, W.W.2
-
14
-
-
0037157156
-
2 and the vibrational relaxation of the six-coordinate heme species
-
2 and the vibrational relaxation of the six-coordinate heme species. J. Am. Chem. Soc. 124 (2002) 5914-5924
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 5914-5924
-
-
Ye, X.1
Demidov, A.2
Champion, P.M.3
-
15
-
-
0032578830
-
Mice without myoglobin
-
Garry D.J., Ordway G.A., Lorenz J.N., Radford N.B., Chin E.R., Grange R.W., Bassel-Duby R., and Williams R.S. Mice without myoglobin. Nature 395 (1998) 905-908
-
(1998)
Nature
, vol.395
, pp. 905-908
-
-
Garry, D.J.1
Ordway, G.A.2
Lorenz, J.N.3
Radford, N.B.4
Chin, E.R.5
Grange, R.W.6
Bassel-Duby, R.7
Williams, R.S.8
-
16
-
-
0001266102
-
A three-dimensional model of the myoglobin molecule obtained by X-ray analysis
-
Kendrew J.C., Bodo G., Dintzis H.M., Parrish R.G., Wyckoff H., and Phillips D.C. A three-dimensional model of the myoglobin molecule obtained by X-ray analysis. Nature 181 (1958) 662-666
-
(1958)
Nature
, vol.181
, pp. 662-666
-
-
Kendrew, J.C.1
Bodo, G.2
Dintzis, H.M.3
Parrish, R.G.4
Wyckoff, H.5
Phillips, D.C.6
-
17
-
-
0001700167
-
Nanosecond absorption spectroscopy of hemoglobin: elementary processes in kinetic cooperativity
-
Hofrichter J., Sommer J.H., Henry E.R., and Eaton W.A. Nanosecond absorption spectroscopy of hemoglobin: elementary processes in kinetic cooperativity. Proc. Natl. Acad. Sci. U. S. A. 80 (1983) 2235-2239
-
(1983)
Proc. Natl. Acad. Sci. U. S. A.
, vol.80
, pp. 2235-2239
-
-
Hofrichter, J.1
Sommer, J.H.2
Henry, E.R.3
Eaton, W.A.4
-
18
-
-
0022114079
-
Protein states and proteinquakes
-
Ansari A., Berendzen J., Bowne S.F., Frauenfelder H., Iben I.E.T., Sauke T.B., Shyamsunder E., and Young R.D. Protein states and proteinquakes. Proc. Natl. Acad. Sci. U. S. A. 82 (1985) 5000-5004
-
(1985)
Proc. Natl. Acad. Sci. U. S. A.
, vol.82
, pp. 5000-5004
-
-
Ansari, A.1
Berendzen, J.2
Bowne, S.F.3
Frauenfelder, H.4
Iben, I.E.T.5
Sauke, T.B.6
Shyamsunder, E.7
Young, R.D.8
-
19
-
-
0016828929
-
Dynamics of ligand binding to myoglobin
-
Austin R.H., Beeson K.W., Eisenstein L., Frauenfelder H., and Gunsalus I.C. Dynamics of ligand binding to myoglobin. Biochemistry 14 (1975) 5355-5373
-
(1975)
Biochemistry
, vol.14
, pp. 5355-5373
-
-
Austin, R.H.1
Beeson, K.W.2
Eisenstein, L.3
Frauenfelder, H.4
Gunsalus, I.C.5
-
20
-
-
0027502033
-
Carbon monoxide recombination to human myoglobin mutants in glycerol-water solutions
-
Balasubramanian S., Lambright D.G., Marden M.C., and Boxer S.G. Carbon monoxide recombination to human myoglobin mutants in glycerol-water solutions. Biochemistry 32 (1993) 2202-2212
-
(1993)
Biochemistry
, vol.32
, pp. 2202-2212
-
-
Balasubramanian, S.1
Lambright, D.G.2
Marden, M.C.3
Boxer, S.G.4
-
21
-
-
0033574735
-
A steric mechanism for inhibition of CO binding to heme proteins
-
Kachalova G.S., Popov A.N., and Bartunik H.D. A steric mechanism for inhibition of CO binding to heme proteins. Science 284 (1999) 473-476
-
(1999)
Science
, vol.284
, pp. 473-476
-
-
Kachalova, G.S.1
Popov, A.N.2
Bartunik, H.D.3
-
22
-
-
0038853525
-
Crystal structures of myoglobin-ligand complexes at near-atomic resolution
-
Vojtchovský J., Chu K., Berendzen J., Sweet R.M., and Schlichting I. Crystal structures of myoglobin-ligand complexes at near-atomic resolution. Biophys. J. 77 (1999) 2153-2174
-
(1999)
Biophys. J.
, vol.77
, pp. 2153-2174
-
-
Vojtchovský, J.1
Chu, K.2
Berendzen, J.3
Sweet, R.M.4
Schlichting, I.5
-
23
-
-
0029647452
-
Binding of CO to myoglobin from a heme pocket docking site to form nearly linear Fe-C-O
-
Lim M., Jackson T.A., and Anfinrud P.A. Binding of CO to myoglobin from a heme pocket docking site to form nearly linear Fe-C-O. Science 269 (1995) 962-966
-
(1995)
Science
, vol.269
, pp. 962-966
-
-
Lim, M.1
Jackson, T.A.2
Anfinrud, P.A.3
-
24
-
-
0031054657
-
Ultrafast rotation and trapping of carbon monoxide dissociated from myoglobin
-
Lim M., Jackson T.A., and Anfinrud P.A. Ultrafast rotation and trapping of carbon monoxide dissociated from myoglobin. Nat. Struct. Biol. 4 (1997) 209-214
-
(1997)
Nat. Struct. Biol.
, vol.4
, pp. 209-214
-
-
Lim, M.1
Jackson, T.A.2
Anfinrud, P.A.3
-
25
-
-
11844258850
-
The origin of stark splitting in the initial photoproduct state of MbCO
-
Nienhaus K., Olson J.S., Franzen S., and Nienhaus G.U. The origin of stark splitting in the initial photoproduct state of MbCO. J. Am. Chem. Soc. 127 (2005) 40-41
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 40-41
-
-
Nienhaus, K.1
Olson, J.S.2
Franzen, S.3
Nienhaus, G.U.4
-
26
-
-
35448945261
-
Protein ligand migration mapped by nonequilibrium 2D-IR exchange spectroscopy
-
Bredenbeck J., Helbing J., Nienhaus K., Nienhaus G.U., and Hamm P. Protein ligand migration mapped by nonequilibrium 2D-IR exchange spectroscopy. Proc. Natl. Acad. Sci. U. S. A. 104 (2007) 14243-14248
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 14243-14248
-
-
Bredenbeck, J.1
Helbing, J.2
Nienhaus, K.3
Nienhaus, G.U.4
Hamm, P.5
-
27
-
-
10544231457
-
Photolysis of the carbon monoxide complex of myoglobin: nanosecond time-resolved crystallography
-
Šrajer V., Teng T., Ursby T., Pradervand C., Ren Z., Adachi S., Schildkamp W., Bourgeois D., Wulff M., and Moffat K. Photolysis of the carbon monoxide complex of myoglobin: nanosecond time-resolved crystallography. Science 274 (1996) 1726-1729
-
(1996)
Science
, vol.274
, pp. 1726-1729
-
-
Šrajer, V.1
Teng, T.2
Ursby, T.3
Pradervand, C.4
Ren, Z.5
Adachi, S.6
Schildkamp, W.7
Bourgeois, D.8
Wulff, M.9
Moffat, K.10
-
28
-
-
0035923445
-
Protein conformational relaxation and ligand migration in myoglobin: a nanosecond to millisecond molecular movie from time-resolved Laue X-ray diffraction
-
Šrajer V., Ren Z., Teng T.Y., Schmidt M., Ursby T., Bourgeois D., Pradervand C., Schildkamp W., Wulff M., and Moffat K. Protein conformational relaxation and ligand migration in myoglobin: a nanosecond to millisecond molecular movie from time-resolved Laue X-ray diffraction. Biochemistry 40 (2001) 13802-13815
-
(2001)
Biochemistry
, vol.40
, pp. 13802-13815
-
-
Šrajer, V.1
Ren, Z.2
Teng, T.Y.3
Schmidt, M.4
Ursby, T.5
Bourgeois, D.6
Pradervand, C.7
Schildkamp, W.8
Wulff, M.9
Moffat, K.10
-
29
-
-
0038047431
-
Watching a protein as it functions with 150-ps time-resolved X-ray crystallography
-
Schotte F., Lim M.H., Jackson T.A., Smirnov A.V., Soman J., Olson J.S., Phillips G.N., Wulff M., and Anfinrud P.A. Watching a protein as it functions with 150-ps time-resolved X-ray crystallography. Science 300 (2003) 1944-1947
-
(2003)
Science
, vol.300
, pp. 1944-1947
-
-
Schotte, F.1
Lim, M.H.2
Jackson, T.A.3
Smirnov, A.V.4
Soman, J.5
Olson, J.S.6
Phillips, G.N.7
Wulff, M.8
Anfinrud, P.A.9
-
30
-
-
33749649515
-
1 kHz tabletop ultrashort hard X-ray source for time-resolved X-ray protein crystallography
-
Bonvalet A., Darmon A., Lambry J.-C., Martin J.-L., and Audebert P. 1 kHz tabletop ultrashort hard X-ray source for time-resolved X-ray protein crystallography. Opt. Lett. 31 (2006) 2753-2755
-
(2006)
Opt. Lett.
, vol.31
, pp. 2753-2755
-
-
Bonvalet, A.1
Darmon, A.2
Lambry, J.-C.3
Martin, J.-L.4
Audebert, P.5
-
31
-
-
0344921349
-
Large-angle convergent-beam setup for femtosecond X-ray crystallography
-
Boschetto D., Rischel C., Uschmann I., Perez J., Fourmaux S., Hulin D., Forster E., and Rousse A. Large-angle convergent-beam setup for femtosecond X-ray crystallography. J. Appl. Crystallogr. 36 (2003) 348-349
-
(2003)
J. Appl. Crystallogr.
, vol.36
, pp. 348-349
-
-
Boschetto, D.1
Rischel, C.2
Uschmann, I.3
Perez, J.4
Fourmaux, S.5
Hulin, D.6
Forster, E.7
Rousse, A.8
-
32
-
-
0027953943
-
Nitric oxide recombination to double mutants of myoglobin: role of ligand diffusion in a fluctuating heme pocket
-
Carlson M.L., Regan R., Elber R., Li H., Phillips Jr. G.N., Olson J.S., and Gibson Q.H. Nitric oxide recombination to double mutants of myoglobin: role of ligand diffusion in a fluctuating heme pocket. Biochemistry 33 (1994) 10597-10606
-
(1994)
Biochemistry
, vol.33
, pp. 10597-10606
-
-
Carlson, M.L.1
Regan, R.2
Elber, R.3
Li, H.4
Phillips Jr., G.N.5
Olson, J.S.6
Gibson, Q.H.7
-
33
-
-
0026526264
-
Distal pocket residues affect picosecond ligand recombination in myoglobin. An experimental and molecular dynamics study of position 29 mutants
-
Gibson Q.H., Regan R., Elber R., Olson J.S., and Carver T.E. Distal pocket residues affect picosecond ligand recombination in myoglobin. An experimental and molecular dynamics study of position 29 mutants. J. Biol. Chem. 267 (1992) 22022-22034
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 22022-22034
-
-
Gibson, Q.H.1
Regan, R.2
Elber, R.3
Olson, J.S.4
Carver, T.E.5
-
34
-
-
0028228087
-
Ultrafast measurements of geminate recombination of NO with site-specific mutants of human myoglobin
-
Petrich J.W., Lambry J.-C., Balasubramanian S., Lambright D.G., Boxer S.G., and Martin J.-L. Ultrafast measurements of geminate recombination of NO with site-specific mutants of human myoglobin. J. Mol. Biol. 238 (1994) 437-444
-
(1994)
J. Mol. Biol.
, vol.238
, pp. 437-444
-
-
Petrich, J.W.1
Lambry, J.-C.2
Balasubramanian, S.3
Lambright, D.G.4
Boxer, S.G.5
Martin, J.-L.6
-
35
-
-
0028941660
-
Structural and functional effects of apolar mutations of the distal valine in myoglobin
-
Quillin M.L., Li T., Olson J.S., Phillips Jr. G.N., Duo Y., Ikeda-Saito M., Regan R., Carlson M., Gibson Q.H., Li H., and Elber R. Structural and functional effects of apolar mutations of the distal valine in myoglobin. J. Mol. Biol. 245 (1995) 416-436
-
(1995)
J. Mol. Biol.
, vol.245
, pp. 416-436
-
-
Quillin, M.L.1
Li, T.2
Olson, J.S.3
Phillips Jr., G.N.4
Duo, Y.5
Ikeda-Saito, M.6
Regan, R.7
Carlson, M.8
Gibson, Q.H.9
Li, H.10
Elber, R.11
-
36
-
-
33746914354
-
Hydrophobic distal pocket affects NO-heme geminate recombination dynamics in dehaloperoxidase and H64V myoglobin
-
Franzen S., Jasaitis A., Belyea J., Brewer S.H., Casey R., MacFarlane IV A.W., Stanley R.J., Vos M.H., and Martin J.-L. Hydrophobic distal pocket affects NO-heme geminate recombination dynamics in dehaloperoxidase and H64V myoglobin. J. Phys. Chem., B 110 (2006) 14483-14493
-
(2006)
J. Phys. Chem., B
, vol.110
, pp. 14483-14493
-
-
Franzen, S.1
Jasaitis, A.2
Belyea, J.3
Brewer, S.H.4
Casey, R.5
MacFarlane IV, A.W.6
Stanley, R.J.7
Vos, M.H.8
Martin, J.-L.9
-
37
-
-
0027512231
-
Ligand diffusion in the distal heme pocket of myoglobin. A primary determinant of geminate rebinding
-
Ikeda-Saito M., Dou Y., Yonetani T., Olson J.S., Li T., Regan R., and Gibson Q.H. Ligand diffusion in the distal heme pocket of myoglobin. A primary determinant of geminate rebinding. J. Biol. Chem. 268 (1993) 6855-6857
-
(1993)
J. Biol. Chem.
, vol.268
, pp. 6855-6857
-
-
Ikeda-Saito, M.1
Dou, Y.2
Yonetani, T.3
Olson, J.S.4
Li, T.5
Regan, R.6
Gibson, Q.H.7
-
38
-
-
11144240641
-
Human myoglobin recognition of oxygen: dynamics of the energy landscape
-
Wang Y., Baskin J.S., Xia T., and Zewail A.H. Human myoglobin recognition of oxygen: dynamics of the energy landscape. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 18000-18005
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 18000-18005
-
-
Wang, Y.1
Baskin, J.S.2
Xia, T.3
Zewail, A.H.4
-
39
-
-
0025734848
-
Ligand binding and protein relaxation in heme proteins: a room temperature analysis of NO geminate recombination
-
Petrich J.W., Lambry J.-C., Kuczera K., Karplus M., Poyart C., and Martin J.-L. Ligand binding and protein relaxation in heme proteins: a room temperature analysis of NO geminate recombination. Biochemistry 30 (1991) 3975-3978
-
(1991)
Biochemistry
, vol.30
, pp. 3975-3978
-
-
Petrich, J.W.1
Lambry, J.-C.2
Kuczera, K.3
Karplus, M.4
Poyart, C.5
Martin, J.-L.6
-
40
-
-
21244506089
-
Protein conformation-induced modulation of ligand binding kinetics: a femtosecond mid-IR study of nitric oxide binding trajectories in myoglobin
-
Kim S., and Lim M. Protein conformation-induced modulation of ligand binding kinetics: a femtosecond mid-IR study of nitric oxide binding trajectories in myoglobin. J. Am. Chem. Soc. 127 (2005) 8908-8909
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 8908-8909
-
-
Kim, S.1
Lim, M.2
-
41
-
-
0025146477
-
High-resolution refinement of yeast iso-1-cytochrome c and comparisons with other eukaryotic cytochromes c
-
Louie G.V., and Brayer G.D. High-resolution refinement of yeast iso-1-cytochrome c and comparisons with other eukaryotic cytochromes c. J. Mol. Biol. 214 (1990) 527-555
-
(1990)
J. Mol. Biol.
, vol.214
, pp. 527-555
-
-
Louie, G.V.1
Brayer, G.D.2
-
42
-
-
0030828226
-
The reorganization energy of cytochrome c revisited
-
Muegge I., Qi P.X., Wand A.J., Chu Z.T., and Warshel A. The reorganization energy of cytochrome c revisited. J. Phys. Chem., B 101 (1997) 825-836
-
(1997)
J. Phys. Chem., B
, vol.101
, pp. 825-836
-
-
Muegge, I.1
Qi, P.X.2
Wand, A.J.3
Chu, Z.T.4
Warshel, A.5
-
43
-
-
28144439868
-
Potential energy surface and molecular dynamics of MbNO: existence of an unsuspected FeON minimum
-
Nutt D.R., Karplus M., and Meuwly M. Potential energy surface and molecular dynamics of MbNO: existence of an unsuspected FeON minimum. J. Phys. Chem., B 109 (2005) 21118-21125
-
(2005)
J. Phys. Chem., B
, vol.109
, pp. 21118-21125
-
-
Nutt, D.R.1
Karplus, M.2
Meuwly, M.3
-
44
-
-
0015234865
-
Studies of Heme proteins. II. Preparation and thermodynamic properties of sperm whale myoglobin
-
Keyes M., Falley M., and Lumry R. Studies of Heme proteins. II. Preparation and thermodynamic properties of sperm whale myoglobin. J. Am. Chem. Soc. 93 (1971) 2035-2040
-
(1971)
J. Am. Chem. Soc.
, vol.93
, pp. 2035-2040
-
-
Keyes, M.1
Falley, M.2
Lumry, R.3
-
45
-
-
0034538248
-
First-principles molecular dynamics simulations of models for the myoglobin active center
-
Rovira C., and Parrinello M. First-principles molecular dynamics simulations of models for the myoglobin active center. Int. J. Quant. Chem. 80 (2000) 1172-1180
-
(2000)
Int. J. Quant. Chem.
, vol.80
, pp. 1172-1180
-
-
Rovira, C.1
Parrinello, M.2
-
46
-
-
27744540748
-
Determination of the Fe-CO bond energy in myoglobin using heterodyne-detected transient thermal phase grating spectroscopy
-
Walther M., Raicu V., Ogilvie J.P., Phillips R., Kluger R., and Miller R.J.D. Determination of the Fe-CO bond energy in myoglobin using heterodyne-detected transient thermal phase grating spectroscopy. J. Phys. Chem., B 109 (2005) 20605-20611
-
(2005)
J. Phys. Chem., B
, vol.109
, pp. 20605-20611
-
-
Walther, M.1
Raicu, V.2
Ogilvie, J.P.3
Phillips, R.4
Kluger, R.5
Miller, R.J.D.6
-
47
-
-
4444234435
-
Coherent vibrational climbing in carboxyhemoglobin
-
Ventalon C., Fraser J.M., Vos M.H., Alexandrou A., Martin J.-L., and Joffre M. Coherent vibrational climbing in carboxyhemoglobin. Proc. Natl. Acad. Sci. U. S. A. 101 (2004) 13216-13220
-
(2004)
Proc. Natl. Acad. Sci. U. S. A.
, vol.101
, pp. 13216-13220
-
-
Ventalon, C.1
Fraser, J.M.2
Vos, M.H.3
Alexandrou, A.4
Martin, J.-L.5
Joffre, M.6
-
48
-
-
0023515963
-
Time-resolved Raman spectroscopy with subpicosecond resolution: vibrational cooling and delocalization of strain energy in photodissociated (carbonmonoxy) hemoglobin
-
Petrich J.W., Martin J.-L., Houde D., Poyart C., and Orszag A. Time-resolved Raman spectroscopy with subpicosecond resolution: vibrational cooling and delocalization of strain energy in photodissociated (carbonmonoxy) hemoglobin. Biochemistry 26 (1987) 7914-7923
-
(1987)
Biochemistry
, vol.26
, pp. 7914-7923
-
-
Petrich, J.W.1
Martin, J.-L.2
Houde, D.3
Poyart, C.4
Orszag, A.5
-
49
-
-
0030689835
-
Direct observation of cooling of heme upon photodissociation of carbonmonoxy myoglobin
-
Mizutani Y., and Kitagawa T. Direct observation of cooling of heme upon photodissociation of carbonmonoxy myoglobin. Science 278 (1997) 443-446
-
(1997)
Science
, vol.278
, pp. 443-446
-
-
Mizutani, Y.1
Kitagawa, T.2
-
50
-
-
0035829917
-
Ultrafast structural relaxation of myoglobin following photodissociation of carbon monoxide probed by time-resolved resonance Raman spectroscopy
-
Mizutani Y., and Kitagawa T. Ultrafast structural relaxation of myoglobin following photodissociation of carbon monoxide probed by time-resolved resonance Raman spectroscopy. J. Phys. Chem., B 105 (2001) 10992-10999
-
(2001)
J. Phys. Chem., B
, vol.105
, pp. 10992-10999
-
-
Mizutani, Y.1
Kitagawa, T.2
-
51
-
-
0000410065
-
Picosecond Raman study of energy flow in a photoexcited heme protein
-
Lingle R., Xu X., Zhu H., Yu S.C., and Hopkins J.B. Picosecond Raman study of energy flow in a photoexcited heme protein. J. Phys. Chem. 95 (1991) 9320-9331
-
(1991)
J. Phys. Chem.
, vol.95
, pp. 9320-9331
-
-
Lingle, R.1
Xu, X.2
Zhu, H.3
Yu, S.C.4
Hopkins, J.B.5
-
52
-
-
0035756040
-
Ultrafast dynamics of myoglobin probed by time-resolved resonance Raman spectroscopy
-
Mizutani Y., and Kitagawa T. Ultrafast dynamics of myoglobin probed by time-resolved resonance Raman spectroscopy. Chem. Rec. 1 (2001) 258-275
-
(2001)
Chem. Rec.
, vol.1
, pp. 258-275
-
-
Mizutani, Y.1
Kitagawa, T.2
-
53
-
-
33746540471
-
Ultrafast heme dynamics in ferrous versus ferric cytochrome c studied by time-resolved resonance Raman and transient absorption spectroscopy
-
Négrerie M., Cianetti S., Vos M.H., Martin J.-L., and Kruglik S.G. Ultrafast heme dynamics in ferrous versus ferric cytochrome c studied by time-resolved resonance Raman and transient absorption spectroscopy. J. Phys. Chem., B 110 (2006) 12766-12781
-
(2006)
J. Phys. Chem., B
, vol.110
, pp. 12766-12781
-
-
Négrerie, M.1
Cianetti, S.2
Vos, M.H.3
Martin, J.-L.4
Kruglik, S.G.5
-
54
-
-
0030197801
-
Femtosecond near-IR absorbance study of photoexcited myoglobin: dynamics of electronic and thermal relaxation
-
Lim M., Jackson T.A., and Anfinrud P.A. Femtosecond near-IR absorbance study of photoexcited myoglobin: dynamics of electronic and thermal relaxation. J. Phys. Chem. 100 (1996) 12043-12051
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 12043-12051
-
-
Lim, M.1
Jackson, T.A.2
Anfinrud, P.A.3
-
55
-
-
33748428737
-
Time-resolved Raman evidence for energy 'funneling' through propionate side chains in heme 'cooling' upon photolysis of carbonmonoxy myoglobin
-
Gao Y., Koyama M., El-Mashtoly S.F., Hayashi T., Harada K., Mizutani Y., and Kitagawa T. Time-resolved Raman evidence for energy 'funneling' through propionate side chains in heme 'cooling' upon photolysis of carbonmonoxy myoglobin. Chem. Phys. Lett. 429 (2006) 239-243
-
(2006)
Chem. Phys. Lett.
, vol.429
, pp. 239-243
-
-
Gao, Y.1
Koyama, M.2
El-Mashtoly, S.F.3
Hayashi, T.4
Harada, K.5
Mizutani, Y.6
Kitagawa, T.7
-
56
-
-
33749574118
-
Role of heme propionates of myoglobin in vibrational energy relaxation
-
Koyama M., Neya S., and Mizutani Y. Role of heme propionates of myoglobin in vibrational energy relaxation. Chem. Phys. Lett. 430 (2006) 404-408
-
(2006)
Chem. Phys. Lett.
, vol.430
, pp. 404-408
-
-
Koyama, M.1
Neya, S.2
Mizutani, Y.3
-
57
-
-
34147126398
-
Molecular dynamics study on the solvent dependent heme cooling following ligand photolysis in carbonmonoxy myoglobin
-
Zhang Y., Fujisaki H., and Straub J.E. Molecular dynamics study on the solvent dependent heme cooling following ligand photolysis in carbonmonoxy myoglobin. J. Phys. Chem., B 111 (2007) 3243-3250
-
(2007)
J. Phys. Chem., B
, vol.111
, pp. 3243-3250
-
-
Zhang, Y.1
Fujisaki, H.2
Straub, J.E.3
-
58
-
-
0141959774
-
Vibrational energy relaxation of "tailored" hemes in myoglobin following ligand photolysis supports energy funneling mechanism of heme "cooling"
-
Bu L.T., and Straub J.E. Vibrational energy relaxation of "tailored" hemes in myoglobin following ligand photolysis supports energy funneling mechanism of heme "cooling". J. Phys. Chem., B 107 (2003) 10634-10639
-
(2003)
J. Phys. Chem., B
, vol.107
, pp. 10634-10639
-
-
Bu, L.T.1
Straub, J.E.2
-
59
-
-
33751158783
-
Energy flow from solute to solvent probed by femtosecond IR spectroscopy: Malachite green and heme protein solutions
-
Lian T., Locke B., Kholodenko Y., and Hochstrasser R.M. Energy flow from solute to solvent probed by femtosecond IR spectroscopy: Malachite green and heme protein solutions. J. Phys. Chem. 98 (1994) 11648-11656
-
(1994)
J. Phys. Chem.
, vol.98
, pp. 11648-11656
-
-
Lian, T.1
Locke, B.2
Kholodenko, Y.3
Hochstrasser, R.M.4
-
60
-
-
36449006186
-
Mid-infrared vibrational spectrum of CO after photodissociation from heme: evidence for a ligand docking site in the heme pocket of hemoglobin and myoglobin
-
Lim M., Jackson T.A., and Anfinrud P.A. Mid-infrared vibrational spectrum of CO after photodissociation from heme: evidence for a ligand docking site in the heme pocket of hemoglobin and myoglobin. J. Chem. Phys. 102 (1995) 4355-4366
-
(1995)
J. Chem. Phys.
, vol.102
, pp. 4355-4366
-
-
Lim, M.1
Jackson, T.A.2
Anfinrud, P.A.3
-
61
-
-
0033453221
-
Vibrational population relaxation of carbon monoxide in the heme pocket of photolyzed carbonmonoxy myoglobin: comparison of time-resolved mid-IR absorbance experiments and molecular dynamics simulations
-
Sagnella D.E., Straub J.E., Jackson T.A., Lim M., and Anfinrud P.A. Vibrational population relaxation of carbon monoxide in the heme pocket of photolyzed carbonmonoxy myoglobin: comparison of time-resolved mid-IR absorbance experiments and molecular dynamics simulations. Proc. Natl. Acad. Sci. U. S. A. 96 (1999) 14324-14329
-
(1999)
Proc. Natl. Acad. Sci. U. S. A.
, vol.96
, pp. 14324-14329
-
-
Sagnella, D.E.1
Straub, J.E.2
Jackson, T.A.3
Lim, M.4
Anfinrud, P.A.5
-
62
-
-
0032418733
-
Protein fluctuations are sensed by stimulated infrared echoes of the vibrations of carbon monoxide and azide probes
-
Lim M., Hamm P., and Hochstrasser R.M. Protein fluctuations are sensed by stimulated infrared echoes of the vibrations of carbon monoxide and azide probes. Proc. Natl. Acad. Sci. U. S. A. 95 (1998) 15315-15320
-
(1998)
Proc. Natl. Acad. Sci. U. S. A.
, vol.95
, pp. 15315-15320
-
-
Lim, M.1
Hamm, P.2
Hochstrasser, R.M.3
-
63
-
-
0000159682
-
Vibrational echo studies of myoglobin-CO
-
Rella C.W., Rector K.D., Kwok A., Hill J.R., Schwettman H.A., Dlott D.D., and Fayer M.D. Vibrational echo studies of myoglobin-CO. J. Phys. Chem. 100 (1996) 15620-15629
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 15620-15629
-
-
Rella, C.W.1
Rector, K.D.2
Kwok, A.3
Hill, J.R.4
Schwettman, H.A.5
Dlott, D.D.6
Fayer, M.D.7
-
64
-
-
0000965864
-
Vibrational relaxation of the CO stretch vibration in hemoglobin-CO, Myoglobin-CO, and protoheme-CO
-
Owrutsky J.C., Li M., Locke B., and Hochstrasser R.M. Vibrational relaxation of the CO stretch vibration in hemoglobin-CO, Myoglobin-CO, and protoheme-CO. J. Phys. Chem. 99 (1995) 4842-4846
-
(1995)
J. Phys. Chem.
, vol.99
, pp. 4842-4846
-
-
Owrutsky, J.C.1
Li, M.2
Locke, B.3
Hochstrasser, R.M.4
-
65
-
-
27644513339
-
Observation of sub-100(ps conformational changes in photolyzed carbonmonoxy-myoglobin probed by time-resolved circular dichroism
-
Dartigalongue T., and Hache F. Observation of sub-100(ps conformational changes in photolyzed carbonmonoxy-myoglobin probed by time-resolved circular dichroism. Chem. Phys. Lett. 415 (2005) 313-316
-
(2005)
Chem. Phys. Lett.
, vol.415
, pp. 313-316
-
-
Dartigalongue, T.1
Hache, F.2
-
66
-
-
34547401903
-
Primary protein response after ligand photodissociation in carbonmonoxy myoglobin
-
Sato A., Gao Y., Kitagawa T., and Mizutani Y. Primary protein response after ligand photodissociation in carbonmonoxy myoglobin. Proc. Natl. Acad. Sci. U. S. A. 104 (2007) 9627-9632
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 9627-9632
-
-
Sato, A.1
Gao, Y.2
Kitagawa, T.3
Mizutani, Y.4
-
67
-
-
0141937865
-
A comparative femtosecond coherence study of the unligated monomeric hemeproteins myoglobin and leghemoglobin
-
Halder M., Das K., Chowdbury P.K., Kundu S., Hargrove M.S., and Petrich J.W. A comparative femtosecond coherence study of the unligated monomeric hemeproteins myoglobin and leghemoglobin. J. Phys. Chem., B 107 (2003) 9933-9938
-
(2003)
J. Phys. Chem., B
, vol.107
, pp. 9933-9938
-
-
Halder, M.1
Das, K.2
Chowdbury, P.K.3
Kundu, S.4
Hargrove, M.S.5
Petrich, J.W.6
-
68
-
-
0042470524
-
Investigations of coherent vibrational oscillations in myoglobin
-
Rosca F., Kumar A.T.N., Ye X., Sjodin T., Demidov A.A., and Champion P.M. Investigations of coherent vibrational oscillations in myoglobin. J. Phys. Chem., A 104 (2000) 4280-4290
-
(2000)
J. Phys. Chem., A
, vol.104
, pp. 4280-4290
-
-
Rosca, F.1
Kumar, A.T.N.2
Ye, X.3
Sjodin, T.4
Demidov, A.A.5
Champion, P.M.6
-
69
-
-
0037061970
-
Investigations of anharmonic low-frequency oscillations in heme proteins
-
Rosca F., Kumar A.T.N., Ionascu D., Ye X., Demidov A.A., Sjodin T., Wharton D., Barrick D., Sligar S.G., Yonetani T., and Champion P.M. Investigations of anharmonic low-frequency oscillations in heme proteins. J. Phys. Chem., A 106 (2002) 3540-3552
-
(2002)
J. Phys. Chem., A
, vol.106
, pp. 3540-3552
-
-
Rosca, F.1
Kumar, A.T.N.2
Ionascu, D.3
Ye, X.4
Demidov, A.A.5
Sjodin, T.6
Wharton, D.7
Barrick, D.8
Sligar, S.G.9
Yonetani, T.10
Champion, P.M.11
-
70
-
-
0000370734
-
Excited state coherent vibrational motion in deoxymyoglobin
-
Vos M.H., Lambry J.-C., and Martin J.-L. Excited state coherent vibrational motion in deoxymyoglobin. J. Chin. Chem. Soc. 47 (2000) 765-768
-
(2000)
J. Chin. Chem. Soc.
, vol.47
, pp. 765-768
-
-
Vos, M.H.1
Lambry, J.-C.2
Martin, J.-L.3
-
71
-
-
0028519187
-
Observation of coherent reaction dynamics in heme-proteins
-
Zhu L., Sage J.T., and Champion P.M. Observation of coherent reaction dynamics in heme-proteins. Science 266 (1994) 629-632
-
(1994)
Science
, vol.266
, pp. 629-632
-
-
Zhu, L.1
Sage, J.T.2
Champion, P.M.3
-
72
-
-
0001416272
-
Real time observation of low frequency heme protein vibrations using femtosecond coherence spectroscopy
-
Zhu L., Li P., Huang M., Sage J.T., and Champion P.M. Real time observation of low frequency heme protein vibrations using femtosecond coherence spectroscopy. Phys. Rev. Lett. 72 (1994) 301-304
-
(1994)
Phys. Rev. Lett.
, vol.72
, pp. 301-304
-
-
Zhu, L.1
Li, P.2
Huang, M.3
Sage, J.T.4
Champion, P.M.5
-
73
-
-
0037022358
-
Coherent infrared emission from myoglobin crystals: an electric field measurement
-
Groot M.-L., Vos M.H., Schlichting I., van Mourik F., Joffre M., Lambry J.-C., and Martin J.-L. Coherent infrared emission from myoglobin crystals: an electric field measurement. Proc. Natl. Acad. Sci. U. S. A. 99 (2002) 1323-1328
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 1323-1328
-
-
Groot, M.-L.1
Vos, M.H.2
Schlichting, I.3
van Mourik, F.4
Joffre, M.5
Lambry, J.-C.6
Martin, J.-L.7
-
74
-
-
0032361412
-
Vibrational coherence in bacterial reaction centers: spectroscopic characterisation of motions active during primary electron transfer
-
Vos M.H., Jones M.R., and Martin J.-L. Vibrational coherence in bacterial reaction centers: spectroscopic characterisation of motions active during primary electron transfer. Chem. Phys. 233 (1998) 179-190
-
(1998)
Chem. Phys.
, vol.233
, pp. 179-190
-
-
Vos, M.H.1
Jones, M.R.2
Martin, J.-L.3
-
75
-
-
0033539117
-
Coherent reaction dynamics in a bacterial cytochrome c oxidase
-
Liebl U., Lipowski G., Negrerie M., Lambry J.-C., Martin J.-L., and Vos M.H. Coherent reaction dynamics in a bacterial cytochrome c oxidase. Nature 401 (1999) 181-184
-
(1999)
Nature
, vol.401
, pp. 181-184
-
-
Liebl, U.1
Lipowski, G.2
Negrerie, M.3
Lambry, J.-C.4
Martin, J.-L.5
Vos, M.H.6
-
76
-
-
0035800021
-
Dynamics of nitric oxide in the active site of reduced cytochrome c oxidase aa3
-
Vos M.H., Lipowski G., Lambry J.-C., Martin J.-L., and Liebl U. Dynamics of nitric oxide in the active site of reduced cytochrome c oxidase aa3. Biochemistry 40 (2001) 7806-7811
-
(2001)
Biochemistry
, vol.40
, pp. 7806-7811
-
-
Vos, M.H.1
Lipowski, G.2
Lambry, J.-C.3
Martin, J.-L.4
Liebl, U.5
-
78
-
-
0032930417
-
Mammalian nitric oxide synthases
-
Stuehr D.J. Mammalian nitric oxide synthases. Biochim. Biophys. Acta 1411 (1999) 217-230
-
(1999)
Biochim. Biophys. Acta
, vol.1411
, pp. 217-230
-
-
Stuehr, D.J.1
-
79
-
-
10444280038
-
Structure-function studies on nitric oxide synthases
-
Li H., and Poulos T.L. Structure-function studies on nitric oxide synthases. J. Inorg. Biochem. 99 (2005) 293-305
-
(2005)
J. Inorg. Biochem.
, vol.99
, pp. 293-305
-
-
Li, H.1
Poulos, T.L.2
-
81
-
-
0038712079
-
Geminate recombination of nitric oxide to endothelial NO-synthase and mechanistic implications
-
Négrerie M., Berka V., Vos M.H., Liebl U., Lambry J.-C., Tsai A.-L., and Martin J.-L. Geminate recombination of nitric oxide to endothelial NO-synthase and mechanistic implications. J. Biol. Chem. 274 (1999) 24694-24702
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 24694-24702
-
-
Négrerie, M.1
Berka, V.2
Vos, M.H.3
Liebl, U.4
Lambry, J.-C.5
Tsai, A.-L.6
Martin, J.-L.7
-
82
-
-
0035861734
-
Control of nitric oxide dynamics by guanylate cyclase in its activated state
-
Négrerie M., Bouzhir-Sima L., Martin J.-L., and Liebl U. Control of nitric oxide dynamics by guanylate cyclase in its activated state. J. Biol. Chem. 276 (2001) 46815-46821
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 46815-46821
-
-
Négrerie, M.1
Bouzhir-Sima, L.2
Martin, J.-L.3
Liebl, U.4
-
83
-
-
0036510622
-
Nitric oxide (NO) traffic in endothelial NO synthase. Evidence for a new no binding site dependent on tetrahydrobiopterin?
-
Slama-Schwok A., Négrerie M., Berka V., Lambry J.-C., Tsai A.-L., Vos M.H., and Martin J.-L. Nitric oxide (NO) traffic in endothelial NO synthase. Evidence for a new no binding site dependent on tetrahydrobiopterin?. J. Biol. Chem. 277 (2002) 7581-7586
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 7581-7586
-
-
Slama-Schwok, A.1
Négrerie, M.2
Berka, V.3
Lambry, J.-C.4
Tsai, A.-L.5
Vos, M.H.6
Martin, J.-L.7
-
84
-
-
1042266660
-
Dynamic regulation of the inducible nitric-oxide synthase by NO. Comparison with the endothelial isoform
-
Gautier C., Négrerie M., Wang Z.-Q., Lambry J.-C., Stuehr D.J., Collin F., Martin J.-L., and Slama-Schwok A. Dynamic regulation of the inducible nitric-oxide synthase by NO. Comparison with the endothelial isoform. J. Biol. Chem. 279 (2004) 4358-4365
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 4358-4365
-
-
Gautier, C.1
Négrerie, M.2
Wang, Z.-Q.3
Lambry, J.-C.4
Stuehr, D.J.5
Collin, F.6
Martin, J.-L.7
Slama-Schwok, A.8
-
85
-
-
33750475167
-
Dynamics of NO rebinding to the heme domain of NO synthase-like proteins from bacterial pathogens
-
Gautier C., Mikulac I., Nioche P., Martasek P., Raman C.S., and Slama-Schwok A. Dynamics of NO rebinding to the heme domain of NO synthase-like proteins from bacterial pathogens. Nitric Oxide 15 (2006) 312-327
-
(2006)
Nitric Oxide
, vol.15
, pp. 312-327
-
-
Gautier, C.1
Mikulac, I.2
Nioche, P.3
Martasek, P.4
Raman, C.S.5
Slama-Schwok, A.6
-
86
-
-
0032902722
-
Guanylate cyclase and the (NO)-N-./cGMP signaling pathway
-
Denninger J.W., and Marletta M.A. Guanylate cyclase and the (NO)-N-./cGMP signaling pathway. Biochim. Biophys. Acta 1411 (1999) 334-350
-
(1999)
Biochim. Biophys. Acta
, vol.1411
, pp. 334-350
-
-
Denninger, J.W.1
Marletta, M.A.2
-
87
-
-
0028228808
-
Soluble guanylate cyclase from bovine lung: activation with nitric oxide and carbon monoxide and spectral characterization of the ferrous and ferric states
-
Stone J.R., and Marletta M.A. Soluble guanylate cyclase from bovine lung: activation with nitric oxide and carbon monoxide and spectral characterization of the ferrous and ferric states. Biochemistry 33 (1994) 5636-5640
-
(1994)
Biochemistry
, vol.33
, pp. 5636-5640
-
-
Stone, J.R.1
Marletta, M.A.2
-
88
-
-
33744541890
-
Role of heme iron coordination and protein structure in the dynamics and geminate rebinding of nitric oxide to the H93G myoglobin mutant: implications for nitric oxide sensors
-
Négrerie M., Kruglik S.G., Lambry J.-C., Vos M.H., Martin J.-L., and Franzen S. Role of heme iron coordination and protein structure in the dynamics and geminate rebinding of nitric oxide to the H93G myoglobin mutant: implications for nitric oxide sensors. J. Biol. Chem. 281 (2006) 10389-10398
-
(2006)
J. Biol. Chem.
, vol.281
, pp. 10389-10398
-
-
Négrerie, M.1
Kruglik, S.G.2
Lambry, J.-C.3
Vos, M.H.4
Martin, J.-L.5
Franzen, S.6
-
89
-
-
33947491915
-
Molecular basis for nitric oxide dynamics and affinity with Alcaligenes xylosoxidans cytochrome c′
-
Kruglik S.G., Lambry J.-C., Cianetti S., Martin J.-L., Eady R.R., Andrew C.R., and Negrerie M. Molecular basis for nitric oxide dynamics and affinity with Alcaligenes xylosoxidans cytochrome c′. J. Biol. Chem. 282 (2007) 5053-5062
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 5053-5062
-
-
Kruglik, S.G.1
Lambry, J.-C.2
Cianetti, S.3
Martin, J.-L.4
Eady, R.R.5
Andrew, C.R.6
Negrerie, M.7
-
90
-
-
34447574729
-
Interaction of cytochrome c with NO studied by time-resolved Raman and absorption spectroscopy
-
Cianetti S., Kruglik S.G., Vos M.H., Turpin P.-Y., Martin J.-L., and Négrerie M. Interaction of cytochrome c with NO studied by time-resolved Raman and absorption spectroscopy. Biochim. Biophys. Acta 1658 (2004) 218
-
(2004)
Biochim. Biophys. Acta
, vol.1658
, pp. 218
-
-
Cianetti, S.1
Kruglik, S.G.2
Vos, M.H.3
Turpin, P.-Y.4
Martin, J.-L.5
Négrerie, M.6
-
91
-
-
33847261166
-
Ligand dynamics in an electron-transfer protein: picosecond geminate recombination of carbon monoxide to heme in mutant forms of cytochrome c
-
Silkstone G., Jasaitis A., Wilson M.T., and Vos M.H. Ligand dynamics in an electron-transfer protein: picosecond geminate recombination of carbon monoxide to heme in mutant forms of cytochrome c. J. Biol. Chem. 282 (2007) 1638-1649
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 1638-1649
-
-
Silkstone, G.1
Jasaitis, A.2
Wilson, M.T.3
Vos, M.H.4
-
92
-
-
0000071491
-
Spectral properties of nitric-oxide complexes of cytochrome-c′ from Alcaligenes Sp Ncib 11015
-
Yoshimura T., Suzuki S., Nakahara A., Iwasaki H., Masuko M., and Matsubara T. Spectral properties of nitric-oxide complexes of cytochrome-c′ from Alcaligenes Sp Ncib 11015. Biochemistry 25 (1986) 2436-2442
-
(1986)
Biochemistry
, vol.25
, pp. 2436-2442
-
-
Yoshimura, T.1
Suzuki, S.2
Nakahara, A.3
Iwasaki, H.4
Masuko, M.5
Matsubara, T.6
-
93
-
-
0034329425
-
Unprecedented proximal binding of nitric oxide to heme: implications for guanylate cyclase
-
Lawson D.M., Stevenson C.E.M., Andrew C.R., and Eady R.R. Unprecedented proximal binding of nitric oxide to heme: implications for guanylate cyclase. EMBO J. 19 (2000) 5661-5671
-
(2000)
EMBO J.
, vol.19
, pp. 5661-5671
-
-
Lawson, D.M.1
Stevenson, C.E.M.2
Andrew, C.R.3
Eady, R.R.4
-
94
-
-
1242274612
-
NO-bound myoglobin: structural diversity and dynamics of the NO ligand
-
Zemojtel T., Rini M., Heyne K., Dandekar T., Nibbering E.T.J., and Kozlowski P.M. NO-bound myoglobin: structural diversity and dynamics of the NO ligand. J. Am. Chem. Soc. 126 (2004) 1930-1931
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 1930-1931
-
-
Zemojtel, T.1
Rini, M.2
Heyne, K.3
Dandekar, T.4
Nibbering, E.T.J.5
Kozlowski, P.M.6
-
95
-
-
11344282347
-
Dynamics of geminate recombination of NO with myoglobin in aqueous solution probed by femtosecond mid-IR spectroscopy
-
Kim S., Jin G., and Lim M. Dynamics of geminate recombination of NO with myoglobin in aqueous solution probed by femtosecond mid-IR spectroscopy. J. Phys. Chem., B 108 (2004) 20366-20375
-
(2004)
J. Phys. Chem., B
, vol.108
, pp. 20366-20375
-
-
Kim, S.1
Jin, G.2
Lim, M.3
-
96
-
-
28844509169
-
Temperature-dependent studies of NO recombination to heme and heme proteins
-
Ionascu D., Gruia F., Ye X., Yu A., Rosca F., Beck C., Demidov A., Olson J.S., and Champion P.M. Temperature-dependent studies of NO recombination to heme and heme proteins. J. Am. Chem. Soc. 127 (2005) 16921-16934
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 16921-16934
-
-
Ionascu, D.1
Gruia, F.2
Ye, X.3
Yu, A.4
Rosca, F.5
Beck, C.6
Demidov, A.7
Olson, J.S.8
Champion, P.M.9
-
97
-
-
0001079663
-
Dependence of NO recombination dynamics in horse myoglobin on solution glycerol content
-
Shreve A.P., Franzen S., Simpson M.C., and Dyer R.B. Dependence of NO recombination dynamics in horse myoglobin on solution glycerol content. J. Phys. Chem., B 103 (1999) 7969-7975
-
(1999)
J. Phys. Chem., B
, vol.103
, pp. 7969-7975
-
-
Shreve, A.P.1
Franzen, S.2
Simpson, M.C.3
Dyer, R.B.4
-
98
-
-
37549054872
-
-
T. Yamashita, L. Bouzhir-Sima, J.-C. Lambry, U. Liebl, M.H. Vos, submitted for publication. Ligand dynamics and early signalling events in the heme domain of the sensor protein Dos from Escherichia coli.
-
-
-
-
100
-
-
7044226454
-
CO sniffing through heme-based sensor proteins
-
Ascenzi P., Bocedi A., Leoni L., Visca P., Zennaro E., Milani M., and Bolognesi M. CO sniffing through heme-based sensor proteins. IUBMB Life 56 (2004) 309-315
-
(2004)
IUBMB Life
, vol.56
, pp. 309-315
-
-
Ascenzi, P.1
Bocedi, A.2
Leoni, L.3
Visca, P.4
Zennaro, E.5
Milani, M.6
Bolognesi, M.7
-
101
-
-
10444220187
-
CooA, a paradigm for gas sensing regulatory proteins
-
Roberts G.P., Kerby R.L., Youn H., and Conrad M. CooA, a paradigm for gas sensing regulatory proteins. J. Inorg. Biochem. 99 (2005) 280-292
-
(2005)
J. Inorg. Biochem.
, vol.99
, pp. 280-292
-
-
Roberts, G.P.1
Kerby, R.L.2
Youn, H.3
Conrad, M.4
-
102
-
-
0033784540
-
Structure of the CO sensing transcription activator CooA
-
Lanzilotta W.N., Schuller D.J., Thorsteinsson M.V., Kerby R.L., Roberts G.P., and Poulos T.L. Structure of the CO sensing transcription activator CooA. Nat. Struct. Biol. 7 (2000) 876-880
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 876-880
-
-
Lanzilotta, W.N.1
Schuller, D.J.2
Thorsteinsson, M.V.3
Kerby, R.L.4
Roberts, G.P.5
Poulos, T.L.6
-
103
-
-
0040182564
-
Identification of histidine 77 as the axial heme ligand of carbonmonoxy CooA by picosecond time-resolved resonance Raman spectroscopy
-
Uchida T., Ishikawa H., Ishimori K., Morishima I., Nakajima H., Aono S., Mizutani Y., and Kitagawa T. Identification of histidine 77 as the axial heme ligand of carbonmonoxy CooA by picosecond time-resolved resonance Raman spectroscopy. Biochemistry 39 (2000) 12747-12752
-
(2000)
Biochemistry
, vol.39
, pp. 12747-12752
-
-
Uchida, T.1
Ishikawa, H.2
Ishimori, K.3
Morishima, I.4
Nakajima, H.5
Aono, S.6
Mizutani, Y.7
Kitagawa, T.8
-
104
-
-
0034623932
-
Dissociation and recombination between ligands and heme in a CO-sensing transcriptional activator CooA
-
Kumazaki S., Nakajima H., Sakaguchi T., Nakagawa E., Shinahara H., Yoshihara K., and Aono S. Dissociation and recombination between ligands and heme in a CO-sensing transcriptional activator CooA. J. Biol. Chem. 275 (2000) 38378-38383
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 38378-38383
-
-
Kumazaki, S.1
Nakajima, H.2
Sakaguchi, T.3
Nakagawa, E.4
Shinahara, H.5
Yoshihara, K.6
Aono, S.7
-
105
-
-
0035904468
-
Conformational dynamics of the transcriptional regulator CooA protein studied by subpicosecond mid-infrared vibrational spectroscopy
-
Rubtsov I.V., Zhang T., Nakajima H., Aono S., Rubtsov G.I., Kumazaki S., and Yoshihara K. Conformational dynamics of the transcriptional regulator CooA protein studied by subpicosecond mid-infrared vibrational spectroscopy. J. Am. Chem. Soc. 123 (2001) 10056-10062
-
(2001)
J. Am. Chem. Soc.
, vol.123
, pp. 10056-10062
-
-
Rubtsov, I.V.1
Zhang, T.2
Nakajima, H.3
Aono, S.4
Rubtsov, G.I.5
Kumazaki, S.6
Yoshihara, K.7
-
106
-
-
2442647919
-
Dynamics of carbon monoxide binding to CooA
-
Puranik M., Nielsen S.B., Youn H., Hvitved A.N., Bourassa J.L., Case M.A., Tengroth C., Balakrishnan G., Thorsteinsson M.V., Groves J.T., McLendon G.L., Roberts G.P., Olson J.S., and Spiro T.G. Dynamics of carbon monoxide binding to CooA. J. Biol. Chem. 279 (2004) 21096-21108
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 21096-21108
-
-
Puranik, M.1
Nielsen, S.B.2
Youn, H.3
Hvitved, A.N.4
Bourassa, J.L.5
Case, M.A.6
Tengroth, C.7
Balakrishnan, G.8
Thorsteinsson, M.V.9
Groves, J.T.10
McLendon, G.L.11
Roberts, G.P.12
Olson, J.S.13
Spiro, T.G.14
-
107
-
-
0038052346
-
Ligand binding dynamics to the heme domain of the oxygen sensor Dos from Escherichia coli
-
Liebl U., Bouzhir-Sima L., Kiger L., Marden M.C., Lambry J.-C., Négrerie M., and Vos M.H. Ligand binding dynamics to the heme domain of the oxygen sensor Dos from Escherichia coli. Biochemistry 42 (2003) 6527-6535
-
(2003)
Biochemistry
, vol.42
, pp. 6527-6535
-
-
Liebl, U.1
Bouzhir-Sima, L.2
Kiger, L.3
Marden, M.C.4
Lambry, J.-C.5
Négrerie, M.6
Vos, M.H.7
-
108
-
-
16344374096
-
Insights into heme-based O2 sensing from structure-function relationships in the FixL proteins
-
Rodgers K.R., and Lukat-Rodgers G.S. Insights into heme-based O2 sensing from structure-function relationships in the FixL proteins. J. Inorg. Biochem. 99 (2005) 963-977
-
(2005)
J. Inorg. Biochem.
, vol.99
, pp. 963-977
-
-
Rodgers, K.R.1
Lukat-Rodgers, G.S.2
-
109
-
-
0025878267
-
A haemoprotein with kinase activity encoded by the oxygen sensor of Rhizobium meliloti
-
Gilles-Gonzalez M.A., Ditta G.S., and Helinski D.R. A haemoprotein with kinase activity encoded by the oxygen sensor of Rhizobium meliloti. Nature 350 (1991) 170-172
-
(1991)
Nature
, vol.350
, pp. 170-172
-
-
Gilles-Gonzalez, M.A.1
Ditta, G.S.2
Helinski, D.R.3
-
110
-
-
0942298565
-
Signal transduction by heme-containing PAS-domain proteins
-
Gilles-Gonzalez M.-A., and Gonzalez G. Signal transduction by heme-containing PAS-domain proteins. J. Appl. Physiol. 96 (2004) 774-783
-
(2004)
J. Appl. Physiol.
, vol.96
, pp. 774-783
-
-
Gilles-Gonzalez, M.-A.1
Gonzalez, G.2
-
111
-
-
0028241788
-
Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation
-
Gilles-Gonzalez M.A., Gonzalez G., Perutz M.F., Kiger L., Marden M.C., and Poyart C. Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation. Biochemistry 33 (1994) 8067-8073
-
(1994)
Biochemistry
, vol.33
, pp. 8067-8073
-
-
Gilles-Gonzalez, M.A.1
Gonzalez, G.2
Perutz, M.F.3
Kiger, L.4
Marden, M.C.5
Poyart, C.6
-
112
-
-
0037195260
-
Structure-based mechanism of O2 sensing and ligand discrimination by the FixL heme domain of Bradyrhizobium japonicum
-
Hao B., Isaza C., Arndt J., Soltis M., and Chan M.K. Structure-based mechanism of O2 sensing and ligand discrimination by the FixL heme domain of Bradyrhizobium japonicum. Biochemistry 41 (2002) 12952-12958
-
(2002)
Biochemistry
, vol.41
, pp. 12952-12958
-
-
Hao, B.1
Isaza, C.2
Arndt, J.3
Soltis, M.4
Chan, M.K.5
-
113
-
-
15444362702
-
Crystal structures of deoxy and CO-bound bjFixLH reveal details of ligand recognition and signaling
-
Key J., and Moffat K. Crystal structures of deoxy and CO-bound bjFixLH reveal details of ligand recognition and signaling. Biochemistry 44 (2005) 4627-4635
-
(2005)
Biochemistry
, vol.44
, pp. 4627-4635
-
-
Key, J.1
Moffat, K.2
-
114
-
-
0034636982
-
Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies
-
Miyatake H., Mukai M., Park S.-Y., Adachi S., Tamura K., Nakamura H., Nakamura K., Tsuchiya T., Iizuka T., and Shiro Y. Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies. J. Mol. Biol. 301 (2000) 415-431
-
(2000)
J. Mol. Biol.
, vol.301
, pp. 415-431
-
-
Miyatake, H.1
Mukai, M.2
Park, S.-Y.3
Adachi, S.4
Tamura, K.5
Nakamura, H.6
Nakamura, K.7
Tsuchiya, T.8
Iizuka, T.9
Shiro, Y.10
-
115
-
-
0034636144
-
New mechanistic insights from structural studies of the oxygen-sensing domain of Bradyrhizobium japonicum FixL
-
Gong W., Hao B., and Chan M.K. New mechanistic insights from structural studies of the oxygen-sensing domain of Bradyrhizobium japonicum FixL. Biochemistry 39 (2000) 3955-3962
-
(2000)
Biochemistry
, vol.39
, pp. 3955-3962
-
-
Gong, W.1
Hao, B.2
Chan, M.K.3
-
116
-
-
0033537054
-
Spectroscopic observation of a FixL switching intermediate
-
Rodgers K.R., Lukat-Rodgers G.S., and Tang L. Spectroscopic observation of a FixL switching intermediate. J. Am. Chem. Soc. 121 (1999) 11241-11242
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 11241-11242
-
-
Rodgers, K.R.1
Lukat-Rodgers, G.S.2
Tang, L.3
-
117
-
-
0036791007
-
Ultrafast ligand rebinding in the heme domain of the oxygen sensors FixL and Dos: general regulatory implications for heme-based sensors
-
Liebl U., Bouzhir-Sima L., Négrerie M., Martin J.-L., and Vos M.H. Ultrafast ligand rebinding in the heme domain of the oxygen sensors FixL and Dos: general regulatory implications for heme-based sensors. Proc. Natl. Acad. Sci. U. S. A. 99 (2002) 12771-12776
-
(2002)
Proc. Natl. Acad. Sci. U. S. A.
, vol.99
, pp. 12771-12776
-
-
Liebl, U.1
Bouzhir-Sima, L.2
Négrerie, M.3
Martin, J.-L.4
Vos, M.H.5
-
118
-
-
23044431684
-
Characterization of conformational changes coupled to ligand photodissociation from the heme binding domain of FixL
-
Miksovska J., Suquet C., Satterlee J.D., and Larsen R.W. Characterization of conformational changes coupled to ligand photodissociation from the heme binding domain of FixL. Biochemistry 44 (2005) 10028-10036
-
(2005)
Biochemistry
, vol.44
, pp. 10028-10036
-
-
Miksovska, J.1
Suquet, C.2
Satterlee, J.D.3
Larsen, R.W.4
-
119
-
-
34247550744
-
Time-resolved crystallographic studies of the heme domain of the oxygen sensor FixL: structural dynamics of ligand rebinding and their relation to signal transduction
-
Key J., Srajer V., Pahl R., and Moffat K. Time-resolved crystallographic studies of the heme domain of the oxygen sensor FixL: structural dynamics of ligand rebinding and their relation to signal transduction. Biochemistry 46 (2007) 4706-4715
-
(2007)
Biochemistry
, vol.46
, pp. 4706-4715
-
-
Key, J.1
Srajer, V.2
Pahl, R.3
Moffat, K.4
-
120
-
-
0002153439
-
Iron motion in a five-coordinated heme model
-
Li X.-Y., and Zgierski M.Z. Iron motion in a five-coordinated heme model. Chem. Phys. Lett. 188 (1992) 16-20
-
(1992)
Chem. Phys. Lett.
, vol.188
, pp. 16-20
-
-
Li, X.-Y.1
Zgierski, M.Z.2
-
121
-
-
0344730727
-
Protein fluctuations, distributed coupling, and the binding of ligands to heme proteins
-
Šrajer V., Reinisch L., and Champion P.M. Protein fluctuations, distributed coupling, and the binding of ligands to heme proteins. J. Am. Chem. Soc. 110 (1988) 6656-6670
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 6656-6670
-
-
Šrajer, V.1
Reinisch, L.2
Champion, P.M.3
-
122
-
-
17644380996
-
Role of arginine 220 in the oxygen sensor FixL from Bradyrhizobium japonicum
-
Balland V., Bouzhir-Sima L., Kiger L., Marden M.C., Vos M.H., Liebl U., and Mattioli T.A. Role of arginine 220 in the oxygen sensor FixL from Bradyrhizobium japonicum. J. Biol. Chem. 280 (2005) 15279-15288
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 15279-15288
-
-
Balland, V.1
Bouzhir-Sima, L.2
Kiger, L.3
Marden, M.C.4
Vos, M.H.5
Liebl, U.6
Mattioli, T.A.7
-
123
-
-
0037663697
-
A distal arginine in oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure
-
Dunham C.M., Dioum E.M., Tuckerman J.R., Gonzalez G., Scott W.G., and Gilles-Gonzalez M.-A. A distal arginine in oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and structure. Biochemistry 42 (2003) 7701-7708
-
(2003)
Biochemistry
, vol.42
, pp. 7701-7708
-
-
Dunham, C.M.1
Dioum, E.M.2
Tuckerman, J.R.3
Gonzalez, G.4
Scott, W.G.5
Gilles-Gonzalez, M.-A.6
-
124
-
-
33646579620
-
Role of distal arginine in early sensing intermediates in the heme domain of the oxygen sensor FixL
-
Jasaitis A., Hola K., Bouzhir-Sima L., Lambry J.-C., Balland V., Vos M.H., and Liebl U. Role of distal arginine in early sensing intermediates in the heme domain of the oxygen sensor FixL. Biochemistry 45 (2006) 6018-6026
-
(2006)
Biochemistry
, vol.45
, pp. 6018-6026
-
-
Jasaitis, A.1
Hola, K.2
Bouzhir-Sima, L.3
Lambry, J.-C.4
Balland, V.5
Vos, M.H.6
Liebl, U.7
-
125
-
-
34249081123
-
Resonance Raman observation of the structural dynamics of FixL on signal transduction and ligand discrimination
-
Hiruma Y., Kikuchi A., Tanaka A., Shiro Y., and Mizutani Y. Resonance Raman observation of the structural dynamics of FixL on signal transduction and ligand discrimination. Biochemistry 46 (2007) 6086-6096
-
(2007)
Biochemistry
, vol.46
, pp. 6086-6096
-
-
Hiruma, Y.1
Kikuchi, A.2
Tanaka, A.3
Shiro, Y.4
Mizutani, Y.5
-
126
-
-
0034646392
-
Dos, a heme-binding PAS protein from Escherichia coli, is a direct oxygen sensor
-
Delgado-Nixon V.M., Gonzalez G., and Gilles-Gonzalez M.A. Dos, a heme-binding PAS protein from Escherichia coli, is a direct oxygen sensor. Biochemistry 39 (2000) 2685-2691
-
(2000)
Biochemistry
, vol.39
, pp. 2685-2691
-
-
Delgado-Nixon, V.M.1
Gonzalez, G.2
Gilles-Gonzalez, M.A.3
-
127
-
-
2442624510
-
A redox-controlled molecular switch revealed by the crystal structure of a bacterial heme PAS sensor
-
Kurokawa H., Lee D.-S., Watanabe M., Sagami I., Mikami B., Raman C.S., and Shimizu T. A redox-controlled molecular switch revealed by the crystal structure of a bacterial heme PAS sensor. J. Biol. Chem. 279 (2004) 20186-20193
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 20186-20193
-
-
Kurokawa, H.1
Lee, D.-S.2
Watanabe, M.3
Sagami, I.4
Mikami, B.5
Raman, C.S.6
Shimizu, T.7
-
128
-
-
1542327658
-
Insights into signal transduction involving PAS domain oxygen-sensing heme proteins from the X-ray crystal structure of Escherichia coli dos heme domain (EcDosH)
-
Park H., Suquet C., Satterlee J.D., and Kang C. Insights into signal transduction involving PAS domain oxygen-sensing heme proteins from the X-ray crystal structure of Escherichia coli dos heme domain (EcDosH). Biochemistry 43 (2004) 2738-2746
-
(2004)
Biochemistry
, vol.43
, pp. 2738-2746
-
-
Park, H.1
Suquet, C.2
Satterlee, J.D.3
Kang, C.4
-
129
-
-
0037189552
-
Characterization of a direct oxygen sensor heme protein from Escherichia coli. Effects of the heme redox states and mutations at the heme-binding site on catalysis and structure
-
Sasakura Y., Hirata S., Sugiyama S., Suzuki S., Taguchi S., Watanabe M., Matsui T., Sagami I., and Shimizu T. Characterization of a direct oxygen sensor heme protein from Escherichia coli. Effects of the heme redox states and mutations at the heme-binding site on catalysis and structure. J. Biol. Chem. 277 (2002) 23821-23827
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 23821-23827
-
-
Sasakura, Y.1
Hirata, S.2
Sugiyama, S.3
Suzuki, S.4
Taguchi, S.5
Watanabe, M.6
Matsui, T.7
Sagami, I.8
Shimizu, T.9
-
130
-
-
33750705911
-
Phosphodiesterase activity of Ec DOS, a heme-regulated enzyme from Escherichia coli, toward 3′,5′-cyclic diguanylic acid is obviously enhanced by O2 and CO binding
-
Takahashi H., and Shimizu T. Phosphodiesterase activity of Ec DOS, a heme-regulated enzyme from Escherichia coli, toward 3′,5′-cyclic diguanylic acid is obviously enhanced by O2 and CO binding. Chem. Lett. 35 (2006) 970-971
-
(2006)
Chem. Lett.
, vol.35
, pp. 970-971
-
-
Takahashi, H.1
Shimizu, T.2
-
131
-
-
34547137430
-
Critical role of the heme axial ligand, Met95, in locking catalysis of the phosphodiesterase from Escherichia coli (Ec DOS) toward cyclic diGMP
-
Tanaka A., Takahashi H., and Shimizu T. Critical role of the heme axial ligand, Met95, in locking catalysis of the phosphodiesterase from Escherichia coli (Ec DOS) toward cyclic diGMP. J. Biol. Chem. 282 (2007) 21301-21307
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 21301-21307
-
-
Tanaka, A.1
Takahashi, H.2
Shimizu, T.3
-
132
-
-
0037031927
-
Stationary and time-resolved resonance Raman spectra of His77 and Met95 mutants of the isolated heme domain of a direct oxygen sensor from Escherichia coli
-
Sato A., Sasakura Y., Sugiyama S., Sagami I., Shimizu T., Mizutani Y., and Kitagawa T. Stationary and time-resolved resonance Raman spectra of His77 and Met95 mutants of the isolated heme domain of a direct oxygen sensor from Escherichia coli. J. Biol. Chem. 277 (2002) 32650-32658
-
(2002)
J. Biol. Chem.
, vol.277
, pp. 32650-32658
-
-
Sato, A.1
Sasakura, Y.2
Sugiyama, S.3
Sagami, I.4
Shimizu, T.5
Mizutani, Y.6
Kitagawa, T.7
-
133
-
-
37549001533
-
-
M.H. Vos, A. Battistoni, L. Kiger, A. Desbois, E. Pilet, E. de Rosny, U. Liebl, Ultrafast dynamics of bond formation between heme and axial residues in six-coordinate heme proteins (in preparation).
-
-
-
-
134
-
-
0036162636
-
Nitric oxide and cytochrome oxidase: substrate, inhibitor or effector?
-
Cooper C.E. Nitric oxide and cytochrome oxidase: substrate, inhibitor or effector?. Trends Biochem. Sci. 27 (2002) 33-39
-
(2002)
Trends Biochem. Sci.
, vol.27
, pp. 33-39
-
-
Cooper, C.E.1
-
135
-
-
0028955899
-
Fast reactions of cytochrome oxidase
-
Einarsdottir O. Fast reactions of cytochrome oxidase. Biochim. Biophys. Acta 1229 (1995) 129-147
-
(1995)
Biochim. Biophys. Acta
, vol.1229
, pp. 129-147
-
-
Einarsdottir, O.1
-
136
-
-
0028890031
-
Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans
-
Iwata S., Ostermeier C., Ludwig B., and Michel H. Structure at 2.8 Å resolution of cytochrome c oxidase from Paracoccus denitrificans. Nature 376 (1995) 660-669
-
(1995)
Nature
, vol.376
, pp. 660-669
-
-
Iwata, S.1
Ostermeier, C.2
Ludwig, B.3
Michel, H.4
-
137
-
-
0029942862
-
The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 Å
-
Tsukihara T., Aoyama H., Yamashita E., Tomizaki T., Yamaguchi H., Shinzawa-Itoh K., Nakashima R., Yaono R., and Yoshikawa S. The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 Å. Science 272 (1996) 1136-1144
-
(1996)
Science
, vol.272
, pp. 1136-1144
-
-
Tsukihara, T.1
Aoyama, H.2
Yamashita, E.3
Tomizaki, T.4
Yamaguchi, H.5
Shinzawa-Itoh, K.6
Nakashima, R.7
Yaono, R.8
Yoshikawa, S.9
-
138
-
-
0008455283
-
Ultrafast photoinduced ligand transfer in carbonmonoxy cytochrome c oxidase. Observation by picosecond infrared spectroscopy
-
Dyer R., Peterson K., Stoutland P., and Woodruff W. Ultrafast photoinduced ligand transfer in carbonmonoxy cytochrome c oxidase. Observation by picosecond infrared spectroscopy. J. Am. Chem. Soc. 113 (1991) 6276-6277
-
(1991)
J. Am. Chem. Soc.
, vol.113
, pp. 6276-6277
-
-
Dyer, R.1
Peterson, K.2
Stoutland, P.3
Woodruff, W.4
-
139
-
-
0028013676
-
Picosecond infrared study of the photodynamics of carbonmonoxy-cytochrome c oxidase
-
Dyer R.B., Peterson K.A., Stoutland P.O., and Woodruff W.H. Picosecond infrared study of the photodynamics of carbonmonoxy-cytochrome c oxidase. Biochemistry 33 (1994) 500-507
-
(1994)
Biochemistry
, vol.33
, pp. 500-507
-
-
Dyer, R.B.1
Peterson, K.A.2
Stoutland, P.O.3
Woodruff, W.H.4
-
140
-
-
0030760534
-
Low-power picosecond resonance Raman evidence for histidine ligation to heme a3 after photodissociation of CO from cytochrome c oxidase
-
Schelvis J.P.M., Deinum G., Varotsis C.A., Ferguson-Miller S., and Babcock G.T. Low-power picosecond resonance Raman evidence for histidine ligation to heme a3 after photodissociation of CO from cytochrome c oxidase. J. Am. Chem. Soc. 119 (1997) 8409-8416
-
(1997)
J. Am. Chem. Soc.
, vol.119
, pp. 8409-8416
-
-
Schelvis, J.P.M.1
Deinum, G.2
Varotsis, C.A.3
Ferguson-Miller, S.4
Babcock, G.T.5
-
141
-
-
33751499747
-
Femtosecond dynamics of reduced cytochrome oxidase and its CO derivative
-
Stoutland P.O., Lambry J.-C., Martin J.-L., and Woodruff W.H. Femtosecond dynamics of reduced cytochrome oxidase and its CO derivative. J. Phys. Chem. 95 (1991) 6406-6408
-
(1991)
J. Phys. Chem.
, vol.95
, pp. 6406-6408
-
-
Stoutland, P.O.1
Lambry, J.-C.2
Martin, J.-L.3
Woodruff, W.H.4
-
142
-
-
18144447465
-
Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase
-
Yoshikawa S., Shinzawa-Itoh K., Nakashima R., Yaono R., Yamashita E., Inoue N., Yao M., Fei M.J., Libeu C.P., Mizushima T., Yamaguchi H., Tomizaki T., and Tsukihara T. Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase. Science 280 (1998) 1723-1729
-
(1998)
Science
, vol.280
, pp. 1723-1729
-
-
Yoshikawa, S.1
Shinzawa-Itoh, K.2
Nakashima, R.3
Yaono, R.4
Yamashita, E.5
Inoue, N.6
Yao, M.7
Fei, M.J.8
Libeu, C.P.9
Mizushima, T.10
Yamaguchi, H.11
Tomizaki, T.12
Tsukihara, T.13
-
144
-
-
0033540098
-
Molecular dynamics simulations of carbon monoxyde dissociation from heme a3 in cytochrome c oxidase from Paracoccus denitrificans
-
Lambry J.-C., Vos M.H., and Martin J.-L. Molecular dynamics simulations of carbon monoxyde dissociation from heme a3 in cytochrome c oxidase from Paracoccus denitrificans. J. Phys. Chem., A 103 (1999) 10132-10137
-
(1999)
J. Phys. Chem., A
, vol.103
, pp. 10132-10137
-
-
Lambry, J.-C.1
Vos, M.H.2
Martin, J.-L.3
-
145
-
-
35648988020
-
Direct observation of ligand transfer and bond formation in cytochrome c oxidase using mid-infrared chirped-pulse upconversion
-
Treuffet J., Kubarych K.J., Lambry J.-C., Pilet E., Masson J.-B., Martin J.-L., Vos M.H., Joffre M., and Alexandrou A. Direct observation of ligand transfer and bond formation in cytochrome c oxidase using mid-infrared chirped-pulse upconversion. Proc. Natl. Acad. Sci. U. S. A. 104 (2007) 15705-15710
-
(2007)
Proc. Natl. Acad. Sci. U. S. A.
, vol.104
, pp. 15705-15710
-
-
Treuffet, J.1
Kubarych, K.J.2
Lambry, J.-C.3
Pilet, E.4
Masson, J.-B.5
Martin, J.-L.6
Vos, M.H.7
Joffre, M.8
Alexandrou, A.9
-
146
-
-
1942440047
-
Control of cytochrome c oxidase activity by nitric oxide
-
Brunori M., Giuffre A., Forte E., Mastronicola D., Barone M.C., and Sarti P. Control of cytochrome c oxidase activity by nitric oxide. Biochim. Biophys. Acta 1655 (2004) 365-371
-
(2004)
Biochim. Biophys. Acta
, vol.1655
, pp. 365-371
-
-
Brunori, M.1
Giuffre, A.2
Forte, E.3
Mastronicola, D.4
Barone, M.C.5
Sarti, P.6
-
147
-
-
8344275232
-
NO binding and dynamics in reduced heme-copper oxidases aa3 from Paracoccus denitrificans and ba3 from Thermus thermophilus
-
Pilet E., Nitschke W., Rappaport F., Soulimane T., Lambry J.-C., Liebl U., and Vos M.H. NO binding and dynamics in reduced heme-copper oxidases aa3 from Paracoccus denitrificans and ba3 from Thermus thermophilus. Biochemistry 43 (2004) 14118-14127
-
(2004)
Biochemistry
, vol.43
, pp. 14118-14127
-
-
Pilet, E.1
Nitschke, W.2
Rappaport, F.3
Soulimane, T.4
Lambry, J.-C.5
Liebl, U.6
Vos, M.H.7
-
148
-
-
34247516039
-
Accommodation of NO in the active site of mammalian and bacterial cytochrome c oxidase aa3
-
Pilet E., Nitschke W., Liebl U., and Vos M.H. Accommodation of NO in the active site of mammalian and bacterial cytochrome c oxidase aa3. Biochim. Biophys. Acta 1767 (2007) 387-392
-
(2007)
Biochim. Biophys. Acta
, vol.1767
, pp. 387-392
-
-
Pilet, E.1
Nitschke, W.2
Liebl, U.3
Vos, M.H.4
-
149
-
-
0026038522
-
Studies of the primary oxygen intermediate in the reaction of fully reduced cytochrome oxidase
-
Blackmore R.S., Greenwood C., and Gibson Q.H. Studies of the primary oxygen intermediate in the reaction of fully reduced cytochrome oxidase. J. Biol. Chem. 266 (1991) 19245-19249
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 19245-19249
-
-
Blackmore, R.S.1
Greenwood, C.2
Gibson, Q.H.3
-
151
-
-
0037143546
-
The rate of internal heme-heme electron transfer in cytochrome c oxidase
-
Namslauer A., Brändén M., and Brzezinski P. The rate of internal heme-heme electron transfer in cytochrome c oxidase. Biochemistry 41 (2002) 10369-10374
-
(2002)
Biochemistry
, vol.41
, pp. 10369-10374
-
-
Namslauer, A.1
Brändén, M.2
Brzezinski, P.3
-
152
-
-
0025841838
-
Internal electron transfer in cytochrome c oxidase: evidence for a rapid equilibrium between cytochrome a and the bimetallic site
-
Oliveberg M., and Malmström B.G. Internal electron transfer in cytochrome c oxidase: evidence for a rapid equilibrium between cytochrome a and the bimetallic site. Biochemistry 30 (1991) 7053-7057
-
(1991)
Biochemistry
, vol.30
, pp. 7053-7057
-
-
Oliveberg, M.1
Malmström, B.G.2
-
153
-
-
0035519279
-
Ultrafast haem-haem electron transfer in cytochrome c oxidase
-
Verkhovsky M.I., Jasaitis A., and Wikström M. Ultrafast haem-haem electron transfer in cytochrome c oxidase. Biochim. Biophys. Acta 1506 (2001) 143-146
-
(2001)
Biochim. Biophys. Acta
, vol.1506
, pp. 143-146
-
-
Verkhovsky, M.I.1
Jasaitis, A.2
Wikström, M.3
-
155
-
-
37549023998
-
-
A. Jasaitis, M.P. Johansson, M. Wikström, M.H. Vos, M.I. Verkhovsky, Nanosecond electron tunneling between the hemes in cytochrome bo3 (submitted for publication).
-
-
-
-
156
-
-
1542375180
-
Dynamics of electron transfer pathways in cytochrome c oxidase
-
Tan M.-L., Balabin I., and Onuchic J.N. Dynamics of electron transfer pathways in cytochrome c oxidase. Biophys. J. 86 (2004) 1813-1819
-
(2004)
Biophys. J.
, vol.86
, pp. 1813-1819
-
-
Tan, M.-L.1
Balabin, I.2
Onuchic, J.N.3
-
157
-
-
23344448599
-
Activationless electron transfer through the hydrophobic core of cytochrome c oxidase
-
Jasaitis A., Rappaport F., Pilet E., Liebl U., and Vos M.H. Activationless electron transfer through the hydrophobic core of cytochrome c oxidase. Proc. Natl. Acad. Sci. U. S. A. 102 (2005) 10882-10886
-
(2005)
Proc. Natl. Acad. Sci. U. S. A.
, vol.102
, pp. 10882-10886
-
-
Jasaitis, A.1
Rappaport, F.2
Pilet, E.3
Liebl, U.4
Vos, M.H.5
-
158
-
-
0033523919
-
Natural engineering principles of electron tunnelling in biological oxidation-reduction
-
Page C.C., Moser C.C., Chen X., and Dutton P.L. Natural engineering principles of electron tunnelling in biological oxidation-reduction. Nature 402 (1999) 47-52
-
(1999)
Nature
, vol.402
, pp. 47-52
-
-
Page, C.C.1
Moser, C.C.2
Chen, X.3
Dutton, P.L.4
-
159
-
-
0040643267
-
Cytochrome bd terminal oxidase
-
Junemann S. Cytochrome bd terminal oxidase. Biochim. Biophys. Acta 1321 (1997) 107-127
-
(1997)
Biochim. Biophys. Acta
, vol.1321
, pp. 107-127
-
-
Junemann, S.1
-
160
-
-
0037022192
-
Interactions between heme d and heme b595 in quinol oxidase bd from Escherichia coli : a femtosecond photoselection study
-
Borisov V.B., Liebl U., Rappaport F., Martin J.-L., Zhang J., Gennis R.B., Konstantinov A.A., and Vos M.H. Interactions between heme d and heme b595 in quinol oxidase bd from Escherichia coli : a femtosecond photoselection study. Biochemistry 41 (2002) 1654-1662
-
(2002)
Biochemistry
, vol.41
, pp. 1654-1662
-
-
Borisov, V.B.1
Liebl, U.2
Rappaport, F.3
Martin, J.-L.4
Zhang, J.5
Gennis, R.B.6
Konstantinov, A.A.7
Vos, M.H.8
-
161
-
-
0034652126
-
Femtosecond resolution of ligand-heme interactions in the high-affinity quinol oxidase bd: a di-heme active site?
-
Vos M.H., Borisov V.B., Liebl U., Martin J.-L., and Konstantinov A.A. Femtosecond resolution of ligand-heme interactions in the high-affinity quinol oxidase bd: a di-heme active site?. Proc. Natl. Acad. Sci. U. S. A. 97 (2000) 1554-1559
-
(2000)
Proc. Natl. Acad. Sci. U. S. A.
, vol.97
, pp. 1554-1559
-
-
Vos, M.H.1
Borisov, V.B.2
Liebl, U.3
Martin, J.-L.4
Konstantinov, A.A.5
-
162
-
-
33847043904
-
Redox control of fast ligand dissociation from Escherichia coli cytochrome bd
-
Borisov V.B., Forte E., Sarti P., Brunori M., Konstantinov A.A., and Giuffre A. Redox control of fast ligand dissociation from Escherichia coli cytochrome bd. Biochem. Biophys. Res. Commun. 355 (2007) 97-102
-
(2007)
Biochem. Biophys. Res. Commun.
, vol.355
, pp. 97-102
-
-
Borisov, V.B.1
Forte, E.2
Sarti, P.3
Brunori, M.4
Konstantinov, A.A.5
Giuffre, A.6
-
163
-
-
0034321422
-
Femtosecond multicolor pump-probe spectroscopy of ferrous cytochrome c
-
Wang W., Ye X., Demidov A.A., Rosca F., Sjodin T., Cao W., Sheeran M., and Champion P.M. Femtosecond multicolor pump-probe spectroscopy of ferrous cytochrome c. J. Phys. Chem., B 104 (2000) 10789-10801
-
(2000)
J. Phys. Chem., B
, vol.104
, pp. 10789-10801
-
-
Wang, W.1
Ye, X.2
Demidov, A.A.3
Rosca, F.4
Sjodin, T.5
Cao, W.6
Sheeran, M.7
Champion, P.M.8
-
164
-
-
7444256720
-
Photodissociation of heme distal methionine in ferrous cytochrome c revealed by sub-picosecond time-resolved resonance Raman spectroscopy
-
Cianetti S., Négrerie M., Vos M.H., Martin J.-L., and Kruglik S.G. Photodissociation of heme distal methionine in ferrous cytochrome c revealed by sub-picosecond time-resolved resonance Raman spectroscopy. J. Am. Chem. Soc. 126 (2004) 13932-13933
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 13932-13933
-
-
Cianetti, S.1
Négrerie, M.2
Vos, M.H.3
Martin, J.-L.4
Kruglik, S.G.5
-
165
-
-
0038381423
-
Nitrosylation of cytochrome c during apoptosis
-
Schonhoff C.M., Gaston B., and Mannick J.B. Nitrosylation of cytochrome c during apoptosis. J. Biol. Chem. 278 (2003) 18265-18270
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 18265-18270
-
-
Schonhoff, C.M.1
Gaston, B.2
Mannick, J.B.3
-
166
-
-
12044252759
-
Structurally engineered cytochromes with novel ligand-binding sites: oxy and carbon monoxy derivatives of semisynthetic horse heart Ala80 cytochrome c
-
Bren K.L., and Gray H.B. Structurally engineered cytochromes with novel ligand-binding sites: oxy and carbon monoxy derivatives of semisynthetic horse heart Ala80 cytochrome c. J. Am. Chem. Soc. 115 (1993) 10382-10383
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 10382-10383
-
-
Bren, K.L.1
Gray, H.B.2
-
167
-
-
0030979741
-
Photochemical electron injection into redox-active proteins
-
Brzezinski P., and Wilson M.T. Photochemical electron injection into redox-active proteins. Proc. Natl. Acad. Sci. U. S. A. 94 (1997) 6176-6179
-
(1997)
Proc. Natl. Acad. Sci. U. S. A.
, vol.94
, pp. 6176-6179
-
-
Brzezinski, P.1
Wilson, M.T.2
-
168
-
-
0037054860
-
Production and characterisation of Met80X mutants of yeast iso-1-cytochrome c: spectral, photochemical and binding studies on the ferrous derivatives
-
Silkstone G., Stanway G., Brzezinski P., and Wilson M.T. Production and characterisation of Met80X mutants of yeast iso-1-cytochrome c: spectral, photochemical and binding studies on the ferrous derivatives. Biophys. Chemist. 98 (2002) 65-77
-
(2002)
Biophys. Chemist.
, vol.98
, pp. 65-77
-
-
Silkstone, G.1
Stanway, G.2
Brzezinski, P.3
Wilson, M.T.4
-
170
-
-
0001739795
-
Picosecond and nanosecond geminate recombination of myoglobin with carbon monoxide, oxygen, nitric oxide and isocyanides
-
Jongeward K.A., Magde D., Taube D.J., Marsters J.C., Traylor T.G., and Sharma V.S. Picosecond and nanosecond geminate recombination of myoglobin with carbon monoxide, oxygen, nitric oxide and isocyanides. J. Am. Chem. Soc. 110 (1988) 380-387
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 380-387
-
-
Jongeward, K.A.1
Magde, D.2
Taube, D.J.3
Marsters, J.C.4
Traylor, T.G.5
Sharma, V.S.6
-
171
-
-
17744370742
-
Picosecond dynamics of ligand interconversion in the primary docking site of heme proteins
-
Kim S., and Lim M. Picosecond dynamics of ligand interconversion in the primary docking site of heme proteins. J. Am. Chem. Soc. 127 (2005) 5786-5787
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 5786-5787
-
-
Kim, S.1
Lim, M.2
-
172
-
-
0028223253
-
Geminate recombination of diatomic ligands CO, O2, and NO with myoglobin
-
Walda K.N., Liu X.Y., Sharma V.S., and Magde D. Geminate recombination of diatomic ligands CO, O2, and NO with myoglobin. Biochemistry 33 (1994) 2198-2209
-
(1994)
Biochemistry
, vol.33
, pp. 2198-2209
-
-
Walda, K.N.1
Liu, X.Y.2
Sharma, V.S.3
Magde, D.4
-
173
-
-
32244442436
-
Dynamics of nitric oxide rebinding and escape in horseradish peroxidase
-
Ye X., Yu A., and Champion P.M. Dynamics of nitric oxide rebinding and escape in horseradish peroxidase. J. Am. Chem. Soc. 128 (2006) 1444-1445
-
(2006)
J. Am. Chem. Soc.
, vol.128
, pp. 1444-1445
-
-
Ye, X.1
Yu, A.2
Champion, P.M.3
-
174
-
-
0021095106
-
Ultrafast relaxation in picosecond photolysis of nitrosylhemoglobin
-
Cornelius P.A., Hochstrasser R.M., and Steele A.W. Ultrafast relaxation in picosecond photolysis of nitrosylhemoglobin. J. Mol. Biol. 163 (1983) 119-128
-
(1983)
J. Mol. Biol.
, vol.163
, pp. 119-128
-
-
Cornelius, P.A.1
Hochstrasser, R.M.2
Steele, A.W.3
|