-
2
-
-
0029043450
-
A dual mechanism for regulating cAMP levels in Escherichia coli
-
Amin N and Peterkofsky A. A dual mechanism for regulating cAMP levels in Escherichia coli. J Biol Chem 270: 11803-11805, 1995.
-
(1995)
J Biol Chem
, vol.270
, pp. 11803-11805
-
-
Amin, N.1
Peterkofsky, A.2
-
3
-
-
0021099098
-
Interaction of ligands with the distal glutamine in elephant myoglobin
-
Bartnicki DE, Mizukami H, and Romero-Herrera AE. Interaction of ligands with the distal glutamine in elephant myoglobin. J Biol Chem 258: 1599-1602, 1983.
-
(1983)
J Biol Chem
, vol.258
, pp. 1599-1602
-
-
Bartnicki, D.E.1
Mizukami, H.2
Romero-Herrera, A.E.3
-
4
-
-
0034705035
-
Domain organization and flavin adenine dinucleotide-binding determinants in the aerotaxis signal transducer Aer of Escherichia coli
-
Bibikov SI, Barnes LA, Gitin Y, and Parkinson JS. Domain organization and flavin adenine dinucleotide-binding determinants in the aerotaxis signal transducer Aer of Escherichia coli. Proc Natl Acad Sci USA 97: 5830-5835, 2000.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 5830-5835
-
-
Bibikov, S.I.1
Barnes, L.A.2
Gitin, Y.3
Parkinson, J.S.4
-
5
-
-
0027508715
-
Detection of a nitrous oxide reductase structural gene in Rhizobium meliloti strains and its location on the nod megaplasmid of JJlc 10 and SU47
-
Chan YK and Wheatcroft R. Detection of a nitrous oxide reductase structural gene in Rhizobium meliloti strains and its location on the nod megaplasmid of JJlc10 and SU47. J Bacteriol 175: 19-26, 1993.
-
(1993)
J Bacteriol
, vol.175
, pp. 19-26
-
-
Chan, Y.K.1
Wheatcroft, R.2
-
6
-
-
0035957226
-
Phosphodiesterase A1, a regulator of cellulose synthesis in Acetobacter xylinum, is a heme-based sensor
-
Chang AL, Tuckerman JR, Gonzalez G, Mayer R, Weinhouse H, Volman G, Amikam D, Benziman M, and Gilles-Gonzalez MA. Phosphodiesterase A1, a regulator of cellulose synthesis in Acetobacter xylinum, is a heme-based sensor. Biochemistry 40: 3420-3426, 2001.
-
(2001)
Biochemistry
, vol.40
, pp. 3420-3426
-
-
Chang, A.L.1
Tuckerman, J.R.2
Gonzalez, G.3
Mayer, R.4
Weinhouse, H.5
Volman, G.6
Amikam, D.7
Benziman, M.8
Gilles-Gonzalez, M.A.9
-
7
-
-
0033587744
-
LOV (light, oxygen, or voltage) domains of the blue-light photoreceptor phototropin (nph1): Binding sites for the chromophore flavin mononucleotide
-
Christie JM, Salomon M, Nozue K, Wada M, and Briggs WR. LOV (light, oxygen, or voltage) domains of the blue-light photoreceptor phototropin (nph1): binding sites for the chromophore flavin mononucleotide. Proc Natl Acad Sci USA 96: 8779-8783, 1999.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 8779-8783
-
-
Christie, J.M.1
Salomon, M.2
Nozue, K.3
Wada, M.4
Briggs, W.R.5
-
8
-
-
0032746809
-
Phosphorylation-induced dimerization of the FixJ receiver domain
-
Da Re S, Schumacher J, Rousseau P, Fourment J, Ebel C, and Kahn D. Phosphorylation-induced dimerization of the FixJ receiver domain. Mol Microbiol 34: 504-511, 1999.
-
(1999)
Mol Microbiol
, vol.34
, pp. 504-511
-
-
Da Re, S.1
Schumacher, J.2
Rousseau, P.3
Fourment, J.4
Ebel, C.5
Kahn, D.6
-
9
-
-
0023731837
-
Cascade regulation of nif gene expression in Rhizobium meliloti
-
David M, Daveran ML, Batut J, Dedieu A, Domergue O, Ghai J, Hertig C, Boistard P, and Kahn D. Cascade regulation of nif gene expression in Rhizobium meliloti. Cell 54: 671-683, 1988.
-
(1988)
Cell
, vol.54
, pp. 671-683
-
-
David, M.1
Daveran, M.L.2
Batut, J.3
Dedieu, A.4
Domergue, O.5
Ghai, J.6
Hertig, C.7
Boistard, P.8
Kahn, D.9
-
10
-
-
0027958149
-
Formation of two hydrogen bonds from the globin to the heme-linked oxygen molecule in Ascaris hemoglobin
-
De Baere I, Perutz MF, Kiger L, Marden MC, and Poyart C. Formation of two hydrogen bonds from the globin to the heme-linked oxygen molecule in Ascaris hemoglobin. Proc Natl Acad Sci USA 91: 1594-1597, 1994.
-
(1994)
Proc Natl Acad Sci USA
, vol.91
, pp. 1594-1597
-
-
De Baere, I.1
Perutz, M.F.2
Kiger, L.3
Marden, M.C.4
Poyart, C.5
-
11
-
-
0034646392
-
Dos, a heme-binding PAS protein from Escherichia coli is a direct oxygen sensor
-
Delgado-Nixon VM, Gonzalez G, and Gilles-Gonzalez MA. Dos, a heme-binding PAS protein from Escherichia coli is a direct oxygen sensor. Biochemistry 39: 2685-2691, 2000.
-
(2000)
Biochemistry
, vol.39
, pp. 2685-2691
-
-
Delgado-Nixon, V.M.1
Gonzalez, G.2
Gilles-Gonzalez, M.A.3
-
12
-
-
0346668332
-
NPAS2: A gas-responsive transcription factor
-
Dioum EM, Rutter J, Tuckerman JR, Gonzalez G, Gilles-Gonzalez MA, and McKnight SL. NPAS2: a gas-responsive transcription factor. Science 298: 2385-2387, 2002.
-
(2002)
Science
, vol.298
, pp. 2385-2387
-
-
Dioum, E.M.1
Rutter, J.2
Tuckerman, J.R.3
Gonzalez, G.4
Gilles-Gonzalez, M.A.5
McKnight, S.L.6
-
13
-
-
0038454431
-
Altered patterns of sleep and behavioral adaptability in NPAS2-deficient mice
-
Dudley CA, Erbel-Sieler C, Estill SJ, Reick M, Franken P, Pitts S, and McKnight SL. Altered patterns of sleep and behavioral adaptability in NPAS2-deficient mice. Science 301: 379-383, 2003.
-
(2003)
Science
, vol.301
, pp. 379-383
-
-
Dudley, C.A.1
Erbel-Sieler, C.2
Estill, S.J.3
Reick, M.4
Franken, P.5
Pitts, S.6
McKnight, S.L.7
-
14
-
-
0037663697
-
A distal arginine in oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and stmcture structure
-
Dunham CM, Dioum EM, Tuckerman JR, Gonzalez G, Scott WG, and Gilles-Gonzalez MA. A distal arginine in oxygen-sensing heme-PAS domains is essential to ligand binding, signal transduction, and stmcture structure. Biochemistry 42: 7701-7708, 2003.
-
(2003)
Biochemistry
, vol.42
, pp. 7701-7708
-
-
Dunham, C.M.1
Dioum, E.M.2
Tuckerman, J.R.3
Gonzalez, G.4
Scott, W.G.5
Gilles-Gonzalez, M.A.6
-
15
-
-
0025234477
-
Atomic-resolution structure of the cellulose synthase regulator cyclic diguanylic acid
-
Egli M, Gessner RV, Williams LD, Quigley GJ, van der Marel GA, van Boom JH, Rich A, and Frederick CA. Atomic-resolution structure of the cellulose synthase regulator cyclic diguanylic acid. Proc Natl Acad Sci USA 87: 3235-3239, 1990.
-
(1990)
Proc Natl Acad Sci USA
, vol.87
, pp. 3235-3239
-
-
Egli, M.1
Gessner, R.V.2
Williams, L.D.3
Quigley, G.J.4
Van Der Marel, G.A.5
Van Boom, J.H.6
Rich, A.7
Frederick, C.A.8
-
16
-
-
0031039399
-
Structure of a protein photocycle intermediate by millisecond time-resolved crystallography
-
Genick UK, Borgstahl GE, Ng K, Ren Z, Pradervand C, Burke PM, Srajer V, Teng TY, Schildkamp W, McRee DE, Moffat K, and Getzoff ED. Structure of a protein photocycle intermediate by millisecond time-resolved crystallography. Science 275: 1471-1475, 1997.
-
(1997)
Science
, vol.275
, pp. 1471-1475
-
-
Genick, U.K.1
Borgstahl, G.E.2
Ng, K.3
Ren, Z.4
Pradervand, C.5
Burke, P.M.6
Srajer, V.7
Teng, T.Y.8
Schildkamp, W.9
McRee, D.E.10
Moffat, K.11
Getzoff, E.D.12
-
17
-
-
0034877185
-
Oxygen signal transduction
-
Gilles-Gonzalez MA. Oxygen signal transduction. IUBMB Life 51: 165-173, 2001.
-
(2001)
IUBMB Life
, vol.51
, pp. 165-173
-
-
Gilles-Gonzalez, M.A.1
-
18
-
-
0025878267
-
A haemoprotein with kinase activity encoded by the oxygen sensor of Rhizobium meliloti
-
Gilles-Gonzalez MA, Ditta GS, and Helinski DR. A haemoprotein with kinase activity encoded by the oxygen sensor of Rhizobium meliloti. Nature 350: 170-172, 1991.
-
(1991)
Nature
, vol.350
, pp. 170-172
-
-
Gilles-Gonzalez, M.A.1
Ditta, G.S.2
Helinski, D.R.3
-
19
-
-
0027219226
-
Regulation of the kinase activity of heme protein FixL from the two-component system FixL/FixJ of Rhizobium meliloti
-
Gilles-Gonzalez MA and Gonzalez G. Regulation of the kinase activity of heme protein FixL from the two-component system FixL/FixJ of Rhizobium meliloti. J Biol Chem 268: 16293-16297, 1993.
-
(1993)
J Biol Chem
, vol.268
, pp. 16293-16297
-
-
Gilles-Gonzalez, M.A.1
Gonzalez, G.2
-
20
-
-
0028949951
-
Kinase activity of oxygen sensor FixL depends on the spin state of its heme iron
-
Gilles-Gonzalez MA, Gonzalez G, and Perutz MF. Kinase activity of oxygen sensor FixL depends on the spin state of its heme iron. Biochemistry 34: 232-236, 1995.
-
(1995)
Biochemistry
, vol.34
, pp. 232-236
-
-
Gilles-Gonzalez, M.A.1
Gonzalez, G.2
Perutz, M.F.3
-
21
-
-
0028241788
-
Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation
-
Gilles-Gonzalez MA, Gonzalez G, Perutz MF, Kiger L, Marden MC, and Poyart C. Heme-based sensors, exemplified by the kinase FixL, are a new class of heme protein with distinctive ligand binding and autoxidation. Biochemistry 33: 8067-8073, 1994.
-
(1994)
Biochemistry
, vol.33
, pp. 8067-8073
-
-
Gilles-Gonzalez, M.A.1
Gonzalez, G.2
Perutz, M.F.3
Kiger, L.4
Marden, M.C.5
Poyart, C.6
-
22
-
-
0032438105
-
Structure of a biological oxygen sensor: A new mechanism for heme-driven signal transduction
-
Gong W, Hao B, Mansy SS, Gonzalez G, Gilles-Gonzalez MA, and Chan MK. Structure of a biological oxygen sensor: a new mechanism for heme-driven signal transduction. Proc Natl Acad Sci USA 95: 15177-15182, 1998.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 15177-15182
-
-
Gong, W.1
Hao, B.2
Mansy, S.S.3
Gonzalez, G.4
Gilles-Gonzalez, M.A.5
Chan, M.K.6
-
23
-
-
0037008046
-
Nature of the displaceable heme-axial residue in the EcDos protein, a heme-based sensor from Escherichia coli
-
Gonzalez G, Dioum EM, Bertolucci CM, Tomita T, Ikeda-Saito M, Cheesman MR, Watmough NJ, and Gilles-Gonzalez MA. Nature of the displaceable heme-axial residue in the EcDos protein, a heme-based sensor from Escherichia coli. Biochemistry 41: 8414-8421, 2002.
-
(2002)
Biochemistry
, vol.41
, pp. 8414-8421
-
-
Gonzalez, G.1
Dioum, E.M.2
Bertolucci, C.M.3
Tomita, T.4
Ikeda-Saito, M.5
Cheesman, M.R.6
Watmough, N.J.7
Gilles-Gonzalez, M.A.8
-
24
-
-
0034116376
-
The PAS superfamily: Sensors of environmental and developmental signals
-
Gu YZ, Hogenesch JB, and Bradfield CA. The PAS superfamily: sensors of environmental and developmental signals. Annu Rev Pharmacol Toxicol 40: 519-561, 2000.
-
(2000)
Annu Rev Pharmacol Toxicol
, vol.40
, pp. 519-561
-
-
Gu, Y.Z.1
Hogenesch, J.B.2
Bradfield, C.A.3
-
25
-
-
0037195260
-
2 sensing and ligand discrimination by the FixL heme domain of Bradyrhizobium japonicum
-
2 sensing and ligand discrimination by the FixL heme domain of Bradyrhizobium japonicum. Biochemistry 41: 12952-12958, 2002.
-
(2002)
Biochemistry
, vol.41
, pp. 12952-12958
-
-
Hao, B.1
Isaza, C.2
Arndt, J.3
Soltis, M.4
Chan, M.K.5
-
26
-
-
0141707094
-
Structural basis of a phototropin light switch
-
Harper SM, Neil LC, and Gardner KH. Structural basis of a phototropin light switch. Science 301: 1541-1544, 2003.
-
(2003)
Science
, vol.301
, pp. 1541-1544
-
-
Harper, S.M.1
Neil, L.C.2
Gardner, K.H.3
-
27
-
-
0029086157
-
The structure of deoxy- and oxy-leghaemoglobin from lupin
-
Harutyunyan EH, Safonova TN, Kuranova IP, Popov AN, Teplyakov AV, Obmolova GV, Rusakov AA, Vainshtein BK, Dodson GG, Wilson JC, and Perutz MF. The structure of deoxy- and oxy-leghaemoglobin from lupin. J Mol Biol 251: 104-115, 1995.
-
(1995)
J Mol Biol
, vol.251
, pp. 104-115
-
-
Harutyunyan, E.H.1
Safonova, T.N.2
Kuranova, I.P.3
Popov, A.N.4
Teplyakov, A.V.5
Obmolova, G.V.6
Rusakov, A.A.7
Vainshtein, B.K.8
Dodson, G.G.9
Wilson, J.C.10
Perutz, M.F.11
-
28
-
-
0029875231
-
Azotobacter vinelandii NifL is a flavoprotein that modulates transcriptional activation of nitrogen-fixation genes via a redox-sensitive switch
-
Hill S, Austin S, Eydmann T, Jones T, and Dixon R. Azotobacter vinelandii NifL is a flavoprotein that modulates transcriptional activation of nitrogen-fixation genes via a redox-sensitive switch. Proc Natl Acad Sci USA 93: 2143-2148, 1996.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 2143-2148
-
-
Hill, S.1
Austin, S.2
Eydmann, T.3
Jones, T.4
Dixon, R.5
-
29
-
-
0027940414
-
Thiol ester-linked p-coumaric acid as a new photoactive prosthetic group in a protein with rhodopsin-like photochemistry
-
Hoff WD, Dux P, Hard K, Devreese B, Nugteren-Roodzant IM, Crielaard W, Boelens R, Kaptein R, van Beeumen J, and Hellingwerf KJ. Thiol ester-linked p-coumaric acid as a new photoactive prosthetic group in a protein with rhodopsin-like photochemistry. Biochemistry 33: 13959-13962, 1994.
-
(1994)
Biochemistry
, vol.33
, pp. 13959-13962
-
-
Hoff, W.D.1
Dux, P.2
Hard, K.3
Devreese, B.4
Nugteren-Roodzant, I.M.5
Crielaard, W.6
Boelens, R.7
Kaptein, R.8
Van Beeumen, J.9
Hellingwerf, K.J.10
-
30
-
-
0025906014
-
Cloning of a factor required for activity of the Ah (dioxin) receptor
-
Hoffman EC, Reyes H, Chu FF, Sander F, Conley LH, Brooks BA, and Hankinson O. Cloning of a factor required for activity of the Ah (dioxin) receptor. Science 252: 954-958, 1991.
-
(1991)
Science
, vol.252
, pp. 954-958
-
-
Hoffman, E.C.1
Reyes, H.2
Chu, F.F.3
Sander, F.4
Conley, L.H.5
Brooks, B.A.6
Hankinson, O.7
-
31
-
-
0032510778
-
The basic-helix-loop-helix-PAS orphan MOP 3 forms transcriptionally active complexes with circadian and hypoxia factors
-
Hogenesch JB, Gu YZ, Jain S, and Bradfield CA. The basic-helix-loop-helix-PAS orphan MOP3 forms transcriptionally active complexes with circadian and hypoxia factors. Proc Natl Acad Sci USA 95: 5474-5479, 1998.
-
(1998)
Proc Natl Acad Sci USA
, vol.95
, pp. 5474-5479
-
-
Hogenesch, J.B.1
Gu, Y.Z.2
Jain, S.3
Bradfield, C.A.4
-
32
-
-
0029051027
-
The Escherichia coli PII signal transduction protein is activated upon binding 2-ketoglutarate and ATP
-
Kamberov ES, Atkinson MR, and Ninfa AJ. The Escherichia coli PII signal transduction protein is activated upon binding 2-ketoglutarate and ATP. J Biol Chem 270: 17797-17807, 1995.
-
(1995)
J Biol Chem
, vol.270
, pp. 17797-17807
-
-
Kamberov, E.S.1
Atkinson, M.R.2
Ninfa, A.J.3
-
33
-
-
0037293407
-
Distal heme pocket regulation of ligand binding and stability in soybean leghemoglobin
-
Kundu S and Hargrove MS. Distal heme pocket regulation of ligand binding and stability in soybean leghemoglobin. Proteins 50: 239-248, 2003.
-
(2003)
Proteins
, vol.50
, pp. 239-248
-
-
Kundu, S.1
Hargrove, M.S.2
-
34
-
-
0036086410
-
Recent improvements to the SMART domain-based sequence annotation resource
-
Letunic I, Goodstadt L, Dickens NJ, Doerks T, Schultz J, Mott R, Ciccarelli F, Copley RR, Ponting CP, and Bork P. Recent improvements to the SMART domain-based sequence annotation resource. Nucleic Acids Res 30: 242-244, 2002.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 242-244
-
-
Letunic, I.1
Goodstadt, L.2
Dickens, N.J.3
Doerks, T.4
Schultz, J.5
Mott, R.6
Ciccarelli, F.7
Copley, R.R.8
Ponting, C.P.9
Bork, P.10
-
35
-
-
0038052346
-
Ligand binding dynamics to the heme domain of the oxygen sensor Dos from Escherichia coli
-
Liebl U, Bouzhir-Sima L, Kiger L, Marden MC, Lambry JC, Negrerie M, and Vos MH. Ligand binding dynamics to the heme domain of the oxygen sensor Dos from Escherichia coli. Biochemistry 42: 6527-6535, 2003.
-
(2003)
Biochemistry
, vol.42
, pp. 6527-6535
-
-
Liebl, U.1
Bouzhir-Sima, L.2
Kiger, L.3
Marden, M.C.4
Lambry, J.C.5
Negrerie, M.6
Vos, M.H.7
-
36
-
-
0027506083
-
Autophosphorylation and phosphatase activities of the oxygen-sensing protein FixL of Rhizobium meliloti are coordinately regulated by oxygen
-
Lois AF, Weinstein M, Ditta GS, and Helinski DR. Autophosphorylation and phosphatase activities of the oxygen-sensing protein FixL of Rhizobium meliloti are coordinately regulated by oxygen. J Biol Chem 268: 4370-4375, 1993.
-
(1993)
J Biol Chem
, vol.268
, pp. 4370-4375
-
-
Lois, A.F.1
Weinstein, M.2
Ditta, G.S.3
Helinski, D.R.4
-
37
-
-
0026512864
-
Phosphorylation of bacterial response regulator proteins by low molecular weight phospho-donors
-
Lukat GS, McCleary WR, Stock AM, and Stock JB. Phosphorylation of bacterial response regulator proteins by low molecular weight phospho-donors. Proc Natl Acad Sci USA 89: 718-722, 1992.
-
(1992)
Proc Natl Acad Sci USA
, vol.89
, pp. 718-722
-
-
Lukat, G.S.1
McCleary, W.R.2
Stock, A.M.3
Stock, J.B.4
-
38
-
-
0032497323
-
Imidazole is a sensitive probe of steric hindrance in the distal pockets of oxygen-binding heme proteins
-
Mansy SS, Olson JS, Gonzalez G, and Gilles-Gonzalez MA. Imidazole is a sensitive probe of steric hindrance in the distal pockets of oxygen-binding heme proteins. Biochemistry 37: 12452-12457, 1998.
-
(1998)
Biochemistry
, vol.37
, pp. 12452-12457
-
-
Mansy, S.S.1
Olson, J.S.2
Gonzalez, G.3
Gilles-Gonzalez, M.A.4
-
39
-
-
0035573882
-
The pVHL-hIF-1 system: A key mediator of oxygen homeostasis
-
Maxwell PH, Pugh CW, and Ratcliffe PJ. The pVHL-hIF-1 system: a key mediator of oxygen homeostasis. Adv Exp Med Biol 502: 365-376, 2001.
-
(2001)
Adv Exp Med Biol
, vol.502
, pp. 365-376
-
-
Maxwell, P.H.1
Pugh, C.W.2
Ratcliffe, P.J.3
-
40
-
-
13044316553
-
Dynamic light-scattering and preliminary crystallographic studies of the sensor domain of the haem-based oxygen sensor FixL from Rhizobium meliloti
-
Miyatake H, Kanai M, Adachi S, Nakamura H, Tamura K, Tanida H, Tsuchiya T, Iizuka T, and Shiro Y. Dynamic light-scattering and preliminary crystallographic studies of the sensor domain of the haem-based oxygen sensor FixL from Rhizobium meliloti. Acta Crystallogr D55: 1215-1218, 1999.
-
(1999)
Acta Crystallogr D
, vol.55
, pp. 1215-1218
-
-
Miyatake, H.1
Kanai, M.2
Adachi, S.3
Nakamura, H.4
Tamura, K.5
Tanida, H.6
Tsuchiya, T.7
Iizuka, T.8
Shiro, Y.9
-
41
-
-
0034636982
-
Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: Crystallographic, mutagenesis and resonance Raman spectroscopic studies
-
Miyatake H, Masahiro M, Park SY, Adachi SI, Tamura K, Nakamura H, Nakamura K, Tsuchiya T, Iizuka T, and Shiro Y. Sensory mechanism of oxygen sensor FixL from Rhizobium meliloti: crystallographic, mutagenesis and resonance Raman spectroscopic studies. J Mol Biol 301: 415-431, 2000.
-
(2000)
J Mol Biol
, vol.301
, pp. 415-431
-
-
Miyatake, H.1
Masahiro, M.2
Park, S.Y.3
Adachi, S.I.4
Tamura, K.5
Nakamura, H.6
Nakamura, K.7
Tsuchiya, T.8
Iizuka, T.9
Shiro, Y.10
-
42
-
-
0033551768
-
Iron coordination structures of oxygen sensor FixL characterized by Fe K-edge extended X-ray absorption fine structure and resonance Raman spectroscopy
-
Miyatake H, Mukai M, Adachi S, Nakamura H, Tamura K, Iizuka T, Shiro Y, Strange RW, and Hasnain SS. Iron coordination structures of oxygen sensor FixL characterized by Fe K-edge extended X-ray absorption fine structure and resonance Raman spectroscopy. J Biol Chem 274: 23176-23184, 1999.
-
(1999)
J Biol Chem
, vol.274
, pp. 23176-23184
-
-
Miyatake, H.1
Mukai, M.2
Adachi, S.3
Nakamura, H.4
Tamura, K.5
Iizuka, T.6
Shiro, Y.7
Strange, R.W.8
Hasnain, S.S.9
-
43
-
-
0028964123
-
The oxygen sensor protein, FixL, of Rhizobium meliloti. Role of histidine residues in heme binding, phosphorylation, and signal transduction
-
Monson EK, Ditta GS, and Helinski DR. The oxygen sensor protein, FixL, of Rhizobium meliloti. Role of histidine residues in heme binding, phosphorylation, and signal transduction. J Biol Chem 270: 5243-5250, 1995.
-
(1995)
J Biol Chem
, vol.270
, pp. 5243-5250
-
-
Monson, E.K.1
Ditta, G.S.2
Helinski, D.R.3
-
44
-
-
0032567106
-
Crystal structure and functional analysis of the HERG potassium channel N terminus: A eukaryotic PAS domain
-
Morais-Cabral JH, Lee A, Cohen SL, Chait BT, Li M, and Mackinnon R. Crystal structure and functional analysis of the HERG potassium channel N terminus: a eukaryotic PAS domain. Cell 95: 649-655, 1998.
-
(1998)
Cell
, vol.95
, pp. 649-655
-
-
Morais-Cabral, J.H.1
Lee, A.2
Cohen, S.L.3
Chait, B.T.4
Li, M.5
Mackinnon, R.6
-
45
-
-
0029894282
-
Kinetic pathways and barriers for ligand binding to myoglobin
-
Olson JS and Phillips GN Jr. Kinetic pathways and barriers for ligand binding to myoglobin. J Biol Chem 271: 17593-17596, 1996.
-
(1996)
J Biol Chem
, vol.271
, pp. 17593-17596
-
-
Olson, J.S.1
Phillips Jr., G.N.2
-
46
-
-
0030773396
-
2, NO, and CO by electrostatic interactions with the bound ligand
-
2, NO, and CO by electrostatic interactions with the bound ligand. J Biol Inorg Chem 2:544-552, 1997.
-
(1997)
J Biol Inorg Chem
, vol.2
, pp. 544-552
-
-
Olson, J.S.1
Phillips Jr., G.N.2
-
47
-
-
0014958182
-
Stereochemistry of cooperative effects in haemoglobin
-
Perutz MF. Stereochemistry of cooperative effects in haemoglobin. Nature 228: 726-739, 1970.
-
(1970)
Nature
, vol.228
, pp. 726-739
-
-
Perutz, M.F.1
-
48
-
-
0026611311
-
Solution IH nuclear magnetic resonance determination of hydrogen bonding of the E10 (66) Arg side-chain to the bound ligand in Aplysia cyano-met myoglobin
-
Qin J, La Mar GN, Ascoli F, Bolognesi M, and Brunori M. Solution IH nuclear magnetic resonance determination of hydrogen bonding of the E10 (66) Arg side-chain to the bound ligand in Aplysia cyano-met myoglobin. J Mol Biol 224: 891-897, 1992.
-
(1992)
J Mol Biol
, vol.224
, pp. 891-897
-
-
Qin, J.1
La Mar, G.N.2
Ascoli, F.3
Bolognesi, M.4
Brunori, M.5
-
49
-
-
0035919618
-
NPAS2: An analog of clock operative in the mammalian forebrain
-
Reick M, Garcia JA, Dudley C, and McKnight SL. NPAS2: an analog of clock operative in the mammalian forebrain. Science 293: 506-509, 2001.
-
(2001)
Science
, vol.293
, pp. 506-509
-
-
Reick, M.1
Garcia, J.A.2
Dudley, C.3
McKnight, S.L.4
-
50
-
-
0027428005
-
Oxygen-regulated in vitro transcription of Rhizobium meliloti nifA and fixK genes
-
Reyrat JM, David M, Blonski C, Boistard P, and Batut J. Oxygen-regulated in vitro transcription of Rhizobium meliloti nifA and fixK genes. J Bacteriol 175: 6867-6872, 1993.
-
(1993)
J Bacteriol
, vol.175
, pp. 6867-6872
-
-
Reyrat, J.M.1
David, M.2
Blonski, C.3
Boistard, P.4
Batut, J.5
-
51
-
-
0035949448
-
Ligand-induced heme ruffling and bent NO geometry in ultra-high-resolution structures of nitrophorin 4
-
Roberts SA, Weichsel A, Qiu Y, Shelnutt JA, Walker FA, and Montfort WR. Ligand-induced heme ruffling and bent NO geometry in ultra-high-resolution structures of nitrophorin 4. Biochemistry 40: 11327-11337, 2001.
-
(2001)
Biochemistry
, vol.40
, pp. 11327-11337
-
-
Roberts, S.A.1
Weichsel, A.2
Qiu, Y.3
Shelnutt, J.A.4
Walker, F.A.5
Montfort, W.R.6
-
52
-
-
0035980263
-
Insights into the signal transduction mechanism of RmFixL provided by carbon monoxide recombination kinetics
-
Rodgers KR, Tang L, Lukat-Rodgers GS, and Wengenack NL. Insights into the signal transduction mechanism of RmFixL provided by carbon monoxide recombination kinetics. Biochemistry 40: 12932-12942, 2001.
-
(2001)
Biochemistry
, vol.40
, pp. 12932-12942
-
-
Rodgers, K.R.1
Tang, L.2
Lukat-Rodgers, G.S.3
Wengenack, N.L.4
-
53
-
-
0026093011
-
Cellulose biosynthesis and function in bacteria
-
Ross P, Mayer R, and Benziman M. Cellulose biosynthesis and function in bacteria. Microbiol Rev 55: 35-58, 1991.
-
(1991)
Microbiol Rev
, vol.55
, pp. 35-58
-
-
Ross, P.1
Mayer, R.2
Benziman, M.3
-
54
-
-
0025116425
-
The cyclic diguanylic acid regulatory system of cellulose synthesis in Acetobacter xylinum: Chemical synthesis and biological activity of nucleotide dimer, trimer, and phosphothioate derivatives
-
Ross P, Mayer R, Weinhouse H, Amikam D, Huggirat Y, Benziman M, Vroom E, Fidder A, de Paus P, Sliedregt LAJM, van der Marel GA, and van Boom JH. The cyclic diguanylic acid regulatory system of cellulose synthesis in Acetobacter xylinum: chemical synthesis and biological activity of nucleotide dimer, trimer, and phosphothioate derivatives. J Biol Chem 265: 18933-18943, 1990.
-
(1990)
J Biol Chem
, vol.265
, pp. 18933-18943
-
-
Ross, P.1
Mayer, R.2
Weinhouse, H.3
Amikam, D.4
Huggirat, Y.5
Benziman, M.6
Vroom, E.7
Fidder, A.8
De Paus, P.9
Sliedregt, L.A.J.M.10
Van Der Marel, G.A.11
Van Boom, J.H.12
-
55
-
-
0037020125
-
Coordinate regulation of sugar flux and translation by PAS kinase
-
Rutter J, Probst BL, and McKnight SL. Coordinate regulation of sugar flux and translation by PAS kinase. Cell 111: 17-28, 2002.
-
(2002)
Cell
, vol.111
, pp. 17-28
-
-
Rutter, J.1
Probst, B.L.2
McKnight, S.L.3
-
56
-
-
0035919479
-
Regulation of clock and NPAS 2 DNA binding by the redox state of NAD cofactors
-
Rutter J, Reick M, Wu LC, and McKnight SL. Regulation of clock and NPAS2 DNA binding by the redox state of NAD cofactors. Science 293: 510-514, 2001.
-
(2001)
Science
, vol.293
, pp. 510-514
-
-
Rutter, J.1
Reick, M.2
Wu, L.C.3
McKnight, S.L.4
-
57
-
-
0038349202
-
The uncoupling of oxygen sensing, phosphorylation signaling and transcriptional activation in oxygen sensor FixL and FixJ mutants
-
Saito K, Ito E, Hosono K, Nakamura K, Imai K, Iizuka T, Shiro Y, and Nakamura H. The uncoupling of oxygen sensing, phosphorylation signaling and transcriptional activation in oxygen sensor FixL and FixJ mutants. Mol Microbiol 48: 373-383, 2003.
-
(2003)
Mol Microbiol
, vol.48
, pp. 373-383
-
-
Saito, K.1
Ito, E.2
Hosono, K.3
Nakamura, K.4
Imai, K.5
Iizuka, T.6
Shiro, Y.7
Nakamura, H.8
-
58
-
-
0029002969
-
A mechanistic link between an inherited and an acquired cardiac arrhythmia: HERG encodes the IKr potassium channel
-
Sanguinetti MC, Jiang C, Curran ME, and Keating MT. A mechanistic link between an inherited and an acquired cardiac arrhythmia: HERG encodes the IKr potassium channel. Cell 81: 299-307, 1995.
-
(1995)
Cell
, vol.81
, pp. 299-307
-
-
Sanguinetti, M.C.1
Jiang, C.2
Curran, M.E.3
Keating, M.T.4
-
59
-
-
0037189552
-
Characterization of a direct oxygen sensor heme protein from Escherichia coli: Effects of the heme redox states and mutations at the heme-binding site on catalysis and structure
-
Sasakura Y, Hirata S, Sugiyama S, Suzuki S, Taguchi S, Watanabe M, Matsui T, Sagami I, and Shimizu T. Characterization of a direct oxygen sensor heme protein from Escherichia coli: effects of the heme redox states and mutations at the heme-binding site on catalysis and structure. J Biol Chem 277: 23821-23827, 2002.
-
(2002)
J Biol Chem
, vol.277
, pp. 23821-23827
-
-
Sasakura, Y.1
Hirata, S.2
Sugiyama, S.3
Suzuki, S.4
Taguchi, S.5
Watanabe, M.6
Matsui, T.7
Sagami, I.8
Shimizu, T.9
-
60
-
-
0036710591
-
Signal transduction to hypoxia-inducible factor 1
-
Semenza G. Signal transduction to hypoxia-inducible factor 1. Biochem Pharmacol 64: 993-998, 2002.
-
(2002)
Biochem Pharmacol
, vol.64
, pp. 993-998
-
-
Semenza, G.1
-
62
-
-
0027458138
-
The AH-receptor: Genetics, structure and function
-
Swanson HI and Bradfield CA. The AH-receptor: genetics, structure and function. Pharmacogenetics 3: 213-230, 1993.
-
(1993)
Pharmacogenetics
, vol.3
, pp. 213-230
-
-
Swanson, H.I.1
Bradfield, C.A.2
-
63
-
-
0032990441
-
PAS domains: Internal sensors of oxygen, redox potential, and light
-
Taylor BL and Zhulin IB. PAS domains: internal sensors of oxygen, redox potential, and light. Microbiol Mol Biol Rev 63: 479-506, 1999.
-
(1999)
Microbiol Mol Biol Rev
, vol.63
, pp. 479-506
-
-
Taylor, B.L.1
Zhulin, I.B.2
-
64
-
-
0037117726
-
A comparative resonance Raman analysis of heme-binding PAS domains: Heme-iron coordination structures of the BjFixL, AxPDEA1, EcDos, and MtDos proteins
-
Tomita T, Gonzalez G, Chang AL, Ikeda-Saito M, and Gilles-Gonzalez MA. A comparative resonance Raman analysis of heme-binding PAS domains: heme-iron coordination structures of the BjFixL, AxPDEA1, EcDos, and MtDos proteins. Biochemistry 41: 4819-4826, 2002.
-
(2002)
Biochemistry
, vol.41
, pp. 4819-4826
-
-
Tomita, T.1
Gonzalez, G.2
Chang, A.L.3
Ikeda-Saito, M.4
Gilles-Gonzalez, M.A.5
-
65
-
-
0035918528
-
A model for ligand binding to hexacoordinate hemoglobins
-
Trent 3rd JT, Hvitved AN, and Hargrove MS. A model for ligand binding to hexacoordinate hemoglobins. Biochemistry 40: 6155-6163, 2001.
-
(2001)
Biochemistry
, vol.40
, pp. 6155-6163
-
-
Trent III, J.T.1
Hvitved, A.N.2
Hargrove, M.S.3
-
66
-
-
0037076515
-
Ligand and oxidation-state specific regulation of the heme-based oxygen sensor FixL from Sinorhizobium meliloti
-
Tuckerman JR, Gonzalez G, Dioum EM, and Gilles-Gonzalez MA. Ligand and oxidation-state specific regulation of the heme-based oxygen sensor FixL from Sinorhizobium meliloti. Biochemistry 41: 6170-6177, 2002.
-
(2002)
Biochemistry
, vol.41
, pp. 6170-6177
-
-
Tuckerman, J.R.1
Gonzalez, G.2
Dioum, E.M.3
Gilles-Gonzalez, M.A.4
-
67
-
-
0035804935
-
Complexation precedes phosphorylation for two-component regulatory system FixL/ FixJ of Sinorhizobium meliloti
-
Tuckerman JR, Gonzalez G, and Gilles-Gonzalez MA. Complexation precedes phosphorylation for two-component regulatory system FixL/ FixJ of Sinorhizobium meliloti. J Mol Biol 308: 449-455, 2001.
-
(2001)
J Mol Biol
, vol.308
, pp. 449-455
-
-
Tuckerman, J.R.1
Gonzalez, G.2
Gilles-Gonzalez, M.A.3
-
68
-
-
0027284068
-
Adventitious variability? The amino acid sequences of nonvertebrate globins
-
Vinogradov SN, Walz DA, Pohajdak B, Moens L, Kapp OH, Suzuki T, and Trotman CAN. Adventitious variability? The amino acid sequences of nonvertebrate globins. Comp Biochem Physiol 106B: 1-26, 1993.
-
(1993)
Comp Biochem Physiol
, vol.106 B
, pp. 1-26
-
-
Vinogradov, S.N.1
Walz, D.A.2
Pohajdak, B.3
Moens, L.4
Kapp, O.H.5
Suzuki, T.6
Trotman, C.A.N.7
-
69
-
-
0029986887
-
Crystal structures of CO-, deoxy- and met-myoglobins at various pH values
-
Yang F and Phillips GN Jr. Crystal structures of CO-, deoxy- and met-myoglobins at various pH values. J Mol Biol 256: 762-774, 1996.
-
(1996)
J Mol Biol
, vol.256
, pp. 762-774
-
-
Yang, F.1
Phillips Jr., G.N.2
-
70
-
-
0030884102
-
PAS domain S-boxes in archaea, bacteria and sensors for oxygen and redox
-
Zhulin IB, Taylor BL, and Dixon R. PAS domain S-boxes in archaea, bacteria and sensors for oxygen and redox. Trends Biochem Sci 22: 331-333, 1997.
-
(1997)
Trends Biochem Sci
, vol.22
, pp. 331-333
-
-
Zhulin, I.B.1
Taylor, B.L.2
Dixon, R.3
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