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Volumn 145, Issue 1, 2007, Pages 160-173

Differential expression of genes important for adaptation in Capsella bursa-pastoris (Brassicaceae)

Author keywords

[No Author keywords available]

Indexed keywords

BIOSYNTHESIS; CARBON; ECOSYSTEMS; MICROARRAYS; TIME SERIES ANALYSIS;

EID: 34548674437     PISSN: 00320889     EISSN: 15322548     Source Type: Journal    
DOI: 10.1104/pp.107.102632     Document Type: Article
Times cited : (43)

References (113)
  • 1
    • 0343953493 scopus 로고    scopus 로고
    • Comparative genome analysis reveals extensive conservation of genome organisation for Arabidopsis thaliana and Capsella rubella
    • Acarkan A, Rossberg M, Koch M, Schmidt R (2000) Comparative genome analysis reveals extensive conservation of genome organisation for Arabidopsis thaliana and Capsella rubella. Plant J 23: 55-62
    • (2000) Plant J , vol.23 , pp. 55-62
    • Acarkan, A.1    Rossberg, M.2    Koch, M.3    Schmidt, R.4
  • 2
    • 0035800467 scopus 로고    scopus 로고
    • Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock
    • Alabadi D, Oyama T, Yanovsky MJ, Harmon FG, Mas P, Kay SA (2001) Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock. Science 293: 880-883
    • (2001) Science , vol.293 , pp. 880-883
    • Alabadi, D.1    Oyama, T.2    Yanovsky, M.J.3    Harmon, F.G.4    Mas, P.5    Kay, S.A.6
  • 6
    • 0001677717 scopus 로고
    • Controlling the false discovery rate - a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y (1995) Controlling the false discovery rate - a practical and powerful approach to multiple testing. J R Stat Soc B 57: 289-300
    • (1995) J R Stat Soc B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 7
    • 0347928661 scopus 로고    scopus 로고
    • Independent control of gibberellin biosynthesis and flowering time by the circadian clock in Arabidopsis
    • Blázquez MA, Trenor M, Weigel D (2002) Independent control of gibberellin biosynthesis and flowering time by the circadian clock in Arabidopsis. Plant Physiol 130: 1770-1775
    • (2002) Plant Physiol , vol.130 , pp. 1770-1775
    • Blázquez, M.A.1    Trenor, M.2    Weigel, D.3
  • 8
    • 3042586217 scopus 로고    scopus 로고
    • The Arabidopsis genome sequence as a tool for genome analysis in Brassicaceae. A comparison of the Arabidopsis and Capsella rubella genomes
    • Boivin K, Acarkan A, Mbulu RS, Clarenz O, Schmidt R (2004) The Arabidopsis genome sequence as a tool for genome analysis in Brassicaceae. A comparison of the Arabidopsis and Capsella rubella genomes. Plant Physiol 135: 735-744
    • (2004) Plant Physiol , vol.135 , pp. 735-744
    • Boivin, K.1    Acarkan, A.2    Mbulu, R.S.3    Clarenz, O.4    Schmidt, R.5
  • 9
    • 0037177625 scopus 로고    scopus 로고
    • Genetic dissection of transcriptional regulation in budding yeast
    • Brem RB, Yvert G, Clinton R, Kruglyak L (2002) Genetic dissection of transcriptional regulation in budding yeast. Science 296: 752-755
    • (2002) Science , vol.296 , pp. 752-755
    • Brem, R.B.1    Yvert, G.2    Clinton, R.3    Kruglyak, L.4
  • 10
    • 0035051906 scopus 로고    scopus 로고
    • Temperature sensing and cold acclimation
    • Browse J, Xin ZG (2001) Temperature sensing and cold acclimation. Curr Opin Plant Biol 4: 241-246
    • (2001) Curr Opin Plant Biol , vol.4 , pp. 241-246
    • Browse, J.1    Xin, Z.G.2
  • 11
    • 0001114634 scopus 로고
    • Die endogene Tagesrhythmik als Grundlage der photoperiodischen Reaktion
    • Bunning E (1936) Die endogene Tagesrhythmik als Grundlage der photoperiodischen Reaktion. Ber Dtsch Bot Ges 54: 590-607
    • (1936) Ber Dtsch Bot Ges , vol.54 , pp. 590-607
    • Bunning, E.1
  • 12
    • 8144222289 scopus 로고    scopus 로고
    • Epistatic interaction between Arabidopsis FRI and FLC flowering time genes generates a latitudinal cline in a life history trait
    • Caicedo AL, Stinchcombe JR, Olsen KM, Schmitt J, Purugganan MD (2004) Epistatic interaction between Arabidopsis FRI and FLC flowering time genes generates a latitudinal cline in a life history trait. Proc Natl Acad Sci USA 101: 15670-15675
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 15670-15675
    • Caicedo, A.L.1    Stinchcombe, J.R.2    Olsen, K.M.3    Schmitt, J.4    Purugganan, M.D.5
  • 13
    • 33746719346 scopus 로고    scopus 로고
    • Bayesian inference of evolutionary history from chloroplast microsatellites in the cosmopolitan weed Capsella bursa-pastoris (Brassicaceae)
    • Ceplitis A, Yingtao S, Lascoux M (2005) Bayesian inference of evolutionary history from chloroplast microsatellites in the cosmopolitan weed Capsella bursa-pastoris (Brassicaceae). Mol Ecol 14: 4221-4233
    • (2005) Mol Ecol , vol.14 , pp. 4221-4233
    • Ceplitis, A.1    Yingtao, S.2    Lascoux, M.3
  • 14
    • 32044469882 scopus 로고    scopus 로고
    • The MYB transcription factor superfamily of Arabidopsis: Expression analysis and phylogenetic comparison with the rice MYB family
    • Chen Y, Yang X, He K, Liu M, Li J, Gao Z, Lin Z, Zhang Y, Wang X, Qiu X, et al (2006) The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. Plant Mol Biol 60: 107-124
    • (2006) Plant Mol Biol , vol.60 , pp. 107-124
    • Chen, Y.1    Yang, X.2    He, K.3    Liu, M.4    Li, J.5    Gao, Z.6    Lin, Z.7    Zhang, Y.8    Wang, X.9    Qiu, X.10
  • 15
    • 0029240287 scopus 로고
    • Isolation of the Arabidopsis Ga4 locus
    • Chiang HH, Hwang I, Goodman HM (1995) Isolation of the Arabidopsis Ga4 locus. Plant Cell 7: 195-201
    • (1995) Plant Cell , vol.7 , pp. 195-201
    • Chiang, H.H.1    Hwang, I.2    Goodman, H.M.3
  • 16
    • 0036900895 scopus 로고    scopus 로고
    • Fundamentals of experimental design for cDNA microarrays
    • Churchill GA (2002) Fundamentals of experimental design for cDNA microarrays. Nat Genet 32: 490-495
    • (2002) Nat Genet , vol.32 , pp. 490-495
    • Churchill, G.A.1
  • 18
    • 84936916896 scopus 로고
    • Robust locally weighted regression and smoothing scatterplots
    • Cleveland WS (1979) Robust locally weighted regression and smoothing scatterplots. J Am Stat Assoc 74: 829-836
    • (1979) J Am Stat Assoc , vol.74 , pp. 829-836
    • Cleveland, W.S.1
  • 21
    • 0000336139 scopus 로고
    • Regression models and life tables
    • Cox DR (1972) Regression models and life tables. J R Stat Soc B 34: 187-220
    • (1972) J R Stat Soc B , vol.34 , pp. 187-220
    • Cox, D.R.1
  • 22
    • 1942475192 scopus 로고    scopus 로고
    • Realtime RT-PCR profiling of over 1400 Arabidopsis transcription factors: Unprecedented sensitivity reveals novel root- and shoot-specific genes
    • Czechowski T, Bari RP, Stitt M, Scheible WR, Udvardi MK (2004) Realtime RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant J 38: 366-379
    • (2004) Plant J , vol.38 , pp. 366-379
    • Czechowski, T.1    Bari, R.P.2    Stitt, M.3    Scheible, W.R.4    Udvardi, M.K.5
  • 23
    • 33745469346 scopus 로고    scopus 로고
    • Analysis of phase of LUCIFERASE expression reveals novel circadian quantitative trait loci in Arabidopsis
    • Darrah C, Taylor BL, Edwards KD, Brown PE, Hall A, McWatters HG (2006) Analysis of phase of LUCIFERASE expression reveals novel circadian quantitative trait loci in Arabidopsis. Plant Physiol 140: 1464-1474
    • (2006) Plant Physiol , vol.140 , pp. 1464-1474
    • Darrah, C.1    Taylor, B.L.2    Edwards, K.D.3    Brown, P.E.4    Hall, A.5    McWatters, H.G.6
  • 24
    • 33845722174 scopus 로고    scopus 로고
    • Cis-regulatory evolution of chalcone-synthase expression in the genus Arabidopsis
    • de Meaux J, Pop A, Mitchell-Olds T (2006) Cis-regulatory evolution of chalcone-synthase expression in the genus Arabidopsis. Genetics 174: 2181-2202
    • (2006) Genetics , vol.174 , pp. 2181-2202
    • de Meaux, J.1    Pop, A.2    Mitchell-Olds, T.3
  • 25
    • 2942633715 scopus 로고    scopus 로고
    • The Arabidopsis F-box protein SLEEPY1 targets gibberellin signaling repressors for gibberellin-induced degradation
    • Dill A, Thomas SG, Hu JH, Steber CM, Sun TP (2004) The Arabidopsis F-box protein SLEEPY1 targets gibberellin signaling repressors for gibberellin-induced degradation. Plant Cell 16: 1392-1405
    • (2004) Plant Cell , vol.16 , pp. 1392-1405
    • Dill, A.1    Thomas, S.G.2    Hu, J.H.3    Steber, C.M.4    Sun, T.P.5
  • 27
    • 0036376993 scopus 로고    scopus 로고
    • Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments
    • Dudoit S, Yang YH, Callow MJ, Speed TP (2002) Statistical methods for identifying differentially expressed genes in replicated cDNA microarray experiments. Statistica Sinica 12: 111-139
    • (2002) Statistica Sinica , vol.12 , pp. 111-139
    • Dudoit, S.1    Yang, Y.H.2    Callow, M.J.3    Speed, T.P.4
  • 30
    • 33750620028 scopus 로고    scopus 로고
    • The molecular evolutionary ecology of plant development: Flowering time in Arabidopsis thaliana
    • DE Soltis, JH Leebens-Mack, PS Soltis, eds, Academic Press, San Diego, pp
    • Engelmann K, Purugganan M (2006) The molecular evolutionary ecology of plant development: flowering time in Arabidopsis thaliana. In DE Soltis, JH Leebens-Mack, PS Soltis, eds, Advances in Botanical Research: Incorporating Advances in Plant Pathology, Vol 44. Academic Press, San Diego, pp 507-526
    • (2006) Advances in Botanical Research: Incorporating Advances in Plant Pathology , vol.44 , pp. 507-526
    • Engelmann, K.1    Purugganan, M.2
  • 32
    • 0031680209 scopus 로고    scopus 로고
    • Phylogenetic utility of the nuclear gene arginine decarboxylase: An example from Brassicaceae
    • Galloway GL, Malmberg RL, Price RA (1998) Phylogenetic utility of the nuclear gene arginine decarboxylase: an example from Brassicaceae. Mol Biol Evol 15: 1312-1320
    • (1998) Mol Biol Evol , vol.15 , pp. 1312-1320
    • Galloway, G.L.1    Malmberg, R.L.2    Price, R.A.3
  • 33
    • 33750959204 scopus 로고    scopus 로고
    • Using DNA microarrays to study natural variation
    • Gilad Y, Borevitz J (2006) Using DNA microarrays to study natural variation. Curr Opin Genet Dev 16: 553-558
    • (2006) Curr Opin Genet Dev , vol.16 , pp. 553-558
    • Gilad, Y.1    Borevitz, J.2
  • 35
    • 33745459045 scopus 로고    scopus 로고
    • AGL24, SHORT VEGETATIVE PHASE, and APETALA1 redundantly control AGAMOUS during early stages of flower development in Arabidopsis
    • Gregis V, Sessa A, Colombo L, Kater MM (2006) AGL24, SHORT VEGETATIVE PHASE, and APETALA1 redundantly control AGAMOUS during early stages of flower development in Arabidopsis. Plant Cell 18: 1373-1382
    • (2006) Plant Cell , vol.18 , pp. 1373-1382
    • Gregis, V.1    Sessa, A.2    Colombo, L.3    Kater, M.M.4
  • 36
    • 0036263045 scopus 로고    scopus 로고
    • Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana
    • Hagenblad J, Nordborg M (2002) Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana. Genetics 161: 289-298
    • (2002) Genetics , vol.161 , pp. 289-298
    • Hagenblad, J.1    Nordborg, M.2
  • 37
    • 0342748732 scopus 로고    scopus 로고
    • Molecular cloning of SVP: A negative regulator of the floral transition in Arabidopsis
    • Hartmann U, Hohmann S, Nettesheim K, Wisman E, Saedler H, Huijser P (2000) Molecular cloning of SVP: a negative regulator of the floral transition in Arabidopsis. Plant J 21: 351-360
    • (2000) Plant J , vol.21 , pp. 351-360
    • Hartmann, U.1    Hohmann, S.2    Nettesheim, K.3    Wisman, E.4    Saedler, H.5    Huijser, P.6
  • 38
    • 11844260676 scopus 로고    scopus 로고
    • Role of chromatin modification in floweringtime control
    • He YH, Amasino RM (2005) Role of chromatin modification in floweringtime control. Trends Plant Sci 10: 30-35
    • (2005) Trends Plant Sci , vol.10 , pp. 30-35
    • He, Y.H.1    Amasino, R.M.2
  • 39
    • 8644284934 scopus 로고    scopus 로고
    • PAF1-complex-mediated histone methylation of FLOWERING LOCUS C chromatin required for the vernalization-responsive, winter-annual habit in Arabidopsis
    • He YH, Doyle MR, Amasino RM (2004) PAF1-complex-mediated histone methylation of FLOWERING LOCUS C chromatin required for the vernalization-responsive, winter-annual habit in Arabidopsis. Genes Dev 18: 2774-2784
    • (2004) Genes Dev , vol.18 , pp. 2774-2784
    • He, Y.H.1    Doyle, M.R.2    Amasino, R.M.3
  • 40
    • 0030916073 scopus 로고    scopus 로고
    • Evolutionary processes in the genus Capsella (Brassicaceae)
    • Hurka H, Neuffer B (1997) Evolutionary processes in the genus Capsella (Brassicaceae). Plant Syst Evol 206: 295-316
    • (1997) Plant Syst Evol , vol.206 , pp. 295-316
    • Hurka, H.1    Neuffer, B.2
  • 41
    • 33750355035 scopus 로고    scopus 로고
    • Photoperiodic control of flowering: Not only by coincidence
    • Imaizumi T, Kay SA (2006) Photoperiodic control of flowering: not only by coincidence. Trends Plant Sci 11: 550-558
    • (2006) Trends Plant Sci , vol.11 , pp. 550-558
    • Imaizumi, T.1    Kay, S.A.2
  • 42
    • 0034644643 scopus 로고    scopus 로고
    • Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time
    • Johanson U, West J, Lister C, Michaels S, Amasino R, Dean C (2000) Molecular analysis of FRIGIDA, a major determinant of natural variation in Arabidopsis flowering time. Science 290: 344-347
    • (2000) Science , vol.290 , pp. 344-347
    • Johanson, U.1    West, J.2    Lister, C.3    Michaels, S.4    Amasino, R.5    Dean, C.6
  • 43
    • 0000884487 scopus 로고    scopus 로고
    • Experimental design for gene expression microarrays
    • Kerr MK, Churchill GA (2001a) Experimental design for gene expression microarrays. Biostatistics 2: 183-210
    • (2001) Biostatistics , vol.2 , pp. 183-210
    • Kerr, M.K.1    Churchill, G.A.2
  • 44
    • 0035032570 scopus 로고    scopus 로고
    • Statistical design and the analysis of gene expression microarray data
    • Kerr MK, Churchill GA (2001b) Statistical design and the analysis of gene expression microarray data. Genet Res 77: 123-128
    • (2001) Genet Res , vol.77 , pp. 123-128
    • Kerr, M.K.1    Churchill, G.A.2
  • 45
    • 0034927555 scopus 로고    scopus 로고
    • Analysis of variance for gene expression microarray data
    • Kerr MK, Martin M, Churchill GA (2000) Analysis of variance for gene expression microarray data. J Comput Biol 7: 819-837
    • (2000) J Comput Biol , vol.7 , pp. 819-837
    • Kerr, M.K.1    Martin, M.2    Churchill, G.A.3
  • 49
    • 0033520985 scopus 로고    scopus 로고
    • A pair of related genes with antagonistic roles in mediating flowering signals
    • Kobayashi Y, Kaya H, Goto K, Iwabuchi M, Araki T (1999) A pair of related genes with antagonistic roles in mediating flowering signals. Science 286: 1960-1962
    • (1999) Science , vol.286 , pp. 1960-1962
    • Kobayashi, Y.1    Kaya, H.2    Goto, K.3    Iwabuchi, M.4    Araki, T.5
  • 50
    • 16244366488 scopus 로고    scopus 로고
    • Genome evolution among cruciferous plants: A lecture from the comparison of the genetic maps of three diploid species - Capsella rubella, Arabidopsis lyrata subsp. petraea, and A. thaliana
    • Koch M, Kiefer M (2005) Genome evolution among cruciferous plants: a lecture from the comparison of the genetic maps of three diploid species - Capsella rubella, Arabidopsis lyrata subsp. petraea, and A. thaliana. Am J Bot 92: 761-767
    • (2005) Am J Bot , vol.92 , pp. 761-767
    • Koch, M.1    Kiefer, M.2
  • 51
    • 0033804889 scopus 로고    scopus 로고
    • Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae)
    • Koch MA, Haubold B, Mitchell-Olds T (2000) Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae). Mol Biol Evol 17: 1483-1498
    • (2000) Mol Biol Evol , vol.17 , pp. 1483-1498
    • Koch, M.A.1    Haubold, B.2    Mitchell-Olds, T.3
  • 53
    • 19444382725 scopus 로고    scopus 로고
    • Identification of a novel family of 70 kDa microtubule-associated proteins in Arabidopsis cells
    • Korolev AV, Chan J, Naldrett MJ, Doonan JH, Lloyd CW (2005) Identification of a novel family of 70 kDa microtubule-associated proteins in Arabidopsis cells. Plant J 42: 547-555
    • (2005) Plant J , vol.42 , pp. 547-555
    • Korolev, A.V.1    Chan, J.2    Naldrett, M.J.3    Doonan, J.H.4    Lloyd, C.W.5
  • 55
    • 0036667687 scopus 로고    scopus 로고
    • DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana: Extensive nonsynonymous variation is consistent with local selection for flowering time
    • Le Corre V, Roux F, Reboud X (2002) DNA polymorphism at the FRIGIDA gene in Arabidopsis thaliana: Extensive nonsynonymous variation is consistent with local selection for flowering time. Mol Biol Evol 19: 1261-1271
    • (2002) Mol Biol Evol , vol.19 , pp. 1261-1271
    • Le Corre, V.1    Roux, F.2    Reboud, X.3
  • 56
    • 0034665868 scopus 로고    scopus 로고
    • The AGAMOUS-LIKE 20 MADS domain protein integrates floral inductive pathways in Arabidopsis
    • Lee H, Suh SS, Park E, Cho E, Ahn JH, Kim SG, Lee JS, Kwon YM, Lee I (2000) The AGAMOUS-LIKE 20 MADS domain protein integrates floral inductive pathways in Arabidopsis. Genes Dev 14: 2366-2376
    • (2000) Genes Dev , vol.14 , pp. 2366-2376
    • Lee, H.1    Suh, S.S.2    Park, E.3    Cho, E.4    Ahn, J.H.5    Kim, S.G.6    Lee, J.S.7    Kwon, Y.M.8    Lee, I.9
  • 58
    • 0037067616 scopus 로고    scopus 로고
    • Multiple roles of Arabidopsis VRN1 in vernalization and flowering time control
    • Levy YY, Mesnage S, Mylne JS, Gendall AR, Dean C (2002) Multiple roles of Arabidopsis VRN1 in vernalization and flowering time control. Science 297: 243-246
    • (2002) Science , vol.297 , pp. 243-246
    • Levy, Y.Y.1    Mesnage, S.2    Mylne, J.S.3    Gendall, A.R.4    Dean, C.5
  • 59
    • 2442682940 scopus 로고    scopus 로고
    • Differential gene expression in response to hydrogen peroxide and the putative PerR regulon of Synechocystis sp. strain PCC 6803
    • Li H, Singh AK, McIntyre LM, Sherman LA (2004) Differential gene expression in response to hydrogen peroxide and the putative PerR regulon of Synechocystis sp. strain PCC 6803. J Bacteriol 186: 3331-3345
    • (2004) J Bacteriol , vol.186 , pp. 3331-3345
    • Li, H.1    Singh, A.K.2    McIntyre, L.M.3    Sherman, L.A.4
  • 60
    • 33646932116 scopus 로고    scopus 로고
    • Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture
    • Li L, Wang XF, Xia M, Stolc V, Su N, Peng ZY, Li SG, Wang J, Wang XP, Deng XW (2005) Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture. Genome Biol 6:R52
    • (2005) Genome Biol , vol.6
    • Li, L.1    Wang, X.F.2    Xia, M.3    Stolc, V.4    Su, N.5    Peng, Z.Y.6    Li, S.G.7    Wang, J.8    Wang, X.P.9    Deng, X.W.10
  • 61
    • 0035144796 scopus 로고    scopus 로고
    • Flowering ecotypes of Capsella bursapastoris (L.) Medik. (Brassicaceae) analysed by a cosegregation of phenotypic characters (QTL) and molecular markers
    • Linde M, Diel S, Neuffer B (2001) Flowering ecotypes of Capsella bursapastoris (L.) Medik. (Brassicaceae) analysed by a cosegregation of phenotypic characters (QTL) and molecular markers. Ann Bot (Lond) 87: 91-99
    • (2001) Ann Bot (Lond) , vol.87 , pp. 91-99
    • Linde, M.1    Diel, S.2    Neuffer, B.3
  • 63
    • 1542267791 scopus 로고    scopus 로고
    • FRIGIDA-related genes are required for the winter-annual habit in Arabidopsis
    • Michaels SD, Bezerra IC, Amasino RM (2004) FRIGIDA-related genes are required for the winter-annual habit in Arabidopsis. Proc Natl Acad Sci USA 101: 3281-3285
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 3281-3285
    • Michaels, S.D.1    Bezerra, I.C.2    Amasino, R.M.3
  • 64
    • 33745562481 scopus 로고    scopus 로고
    • Genetic mechanisms and evolutionary significance of natural variation in Arabidopsis
    • Mitchell-Olds T, Schmitt J (2006) Genetic mechanisms and evolutionary significance of natural variation in Arabidopsis. Nature 441: 947-952
    • (2006) Nature , vol.441 , pp. 947-952
    • Mitchell-Olds, T.1    Schmitt, J.2
  • 66
    • 0141792965 scopus 로고    scopus 로고
    • The SOC1 MADS-box gene integrates vernalization and gibberellin signals for flowering in Arabidopsis
    • Moon J, Suh SS, Lee H, Choi KR, Hong CB, Paek NC, Kim SG, Lee I (2003) The SOC1 MADS-box gene integrates vernalization and gibberellin signals for flowering in Arabidopsis. Plant J 35: 613-623
    • (2003) Plant J , vol.35 , pp. 613-623
    • Moon, J.1    Suh, S.S.2    Lee, H.3    Choi, K.R.4    Hong, C.B.5    Paek, N.C.6    Kim, S.G.7    Lee, I.8
  • 67
    • 0037341173 scopus 로고    scopus 로고
    • EMF genes maintain vegetative development by repressing the flower program in Arabidopsis
    • Moon YH, Chen LJ, Pan RL, Chang HS, Zhu T, Maffeo DM, Sung ZR (2003) EMF genes maintain vegetative development by repressing the flower program in Arabidopsis. Plant Cell 15: 681-693
    • (2003) Plant Cell , vol.15 , pp. 681-693
    • Moon, Y.H.1    Chen, L.J.2    Pan, R.L.3    Chang, H.S.4    Zhu, T.5    Maffeo, D.M.6    Sung, Z.R.7
  • 68
    • 0036277413 scopus 로고    scopus 로고
    • Control of flowering time: Interacting pathways as a basis for diversity
    • Mouradov A, Cremer F, Coupland G (2002) Control of flowering time: interacting pathways as a basis for diversity. Plant Cell (Suppl) 14: S111-S130
    • (2002) Plant Cell (Suppl) , vol.14
    • Mouradov, A.1    Cremer, F.2    Coupland, G.3
  • 69
    • 0025672118 scopus 로고
    • Ecotype differentiation in Capsella
    • Neuffer B (1990) Ecotype differentiation in Capsella. Vegetatio 89: 165-171
    • (1990) Vegetatio , vol.89 , pp. 165-171
    • Neuffer, B.1
  • 70
    • 0024873971 scopus 로고
    • Genetic-ecology of Capsella bursa-pastoris from an altitudinal transsect in the Alps
    • Neuffer B, Bartelheim S (1989) Genetic-ecology of Capsella bursa-pastoris from an altitudinal transsect in the Alps. Oecologia 81: 521-527
    • (1989) Oecologia , vol.81 , pp. 521-527
    • Neuffer, B.1    Bartelheim, S.2
  • 71
    • 0001218387 scopus 로고
    • Adaptation in life-history traits of colonizing plant-species - variation of development time until flowering in natural-populations of Capsella bursa-pastoris (Cruciferae)
    • Neuffer B, Hurka H (1986) Adaptation in life-history traits of colonizing plant-species - variation of development time until flowering in natural-populations of Capsella bursa-pastoris (Cruciferae). Plant Syst Evol 152: 277-296
    • (1986) Plant Syst Evol , vol.152 , pp. 277-296
    • Neuffer, B.1    Hurka, H.2
  • 72
    • 0032697139 scopus 로고    scopus 로고
    • Colonization history and introduction dynamics of Capsella bursa-pastoris (Brassicaceae) in North America: Isozymes and quantitative traits
    • Neuffer B, Hurka H (1999) Colonization history and introduction dynamics of Capsella bursa-pastoris (Brassicaceae) in North America: isozymes and quantitative traits. Mol Ecol 8: 1667-1681
    • (1999) Mol Ecol , vol.8 , pp. 1667-1681
    • Neuffer, B.1    Hurka, H.2
  • 74
    • 0036789519 scopus 로고    scopus 로고
    • Variation in gene expression within and among natural populations
    • Oleksiak MF, Churchill GA, Crawford DL (2002) Variation in gene expression within and among natural populations. Nat Genet 32: 261-266
    • (2002) Nat Genet , vol.32 , pp. 261-266
    • Oleksiak, M.F.1    Churchill, G.A.2    Crawford, D.L.3
  • 75
    • 0036266437 scopus 로고    scopus 로고
    • Naturally occurring indel variation in the Brassica nigra COL1 gene is associated with variation in flowering time
    • Österberg MK, Shavorskaya O, Lascoux M, Lagercrantz U (2002) Naturally occurring indel variation in the Brassica nigra COL1 gene is associated with variation in flowering time. Genetics 161: 299-306
    • (2002) Genetics , vol.161 , pp. 299-306
    • Österberg, M.K.1    Shavorskaya, O.2    Lascoux, M.3    Lagercrantz, U.4
  • 76
    • 0026310048 scopus 로고
    • Microenvironmental correlates of phenotypic variation in Capsella bursa-pastoris (Cruciferae)
    • Paoletti C, Pigliucci M, Serafini M (1991) Microenvironmental correlates of phenotypic variation in Capsella bursa-pastoris (Cruciferae). Can J Bot 69: 1637-1641
    • (1991) Can J Bot , vol.69 , pp. 1637-1641
    • Paoletti, C.1    Pigliucci, M.2    Serafini, M.3
  • 77
    • 33646872802 scopus 로고    scopus 로고
    • The proteasome-dependent degradation of CKB4 is regulated by the Arabidopsis biological clock
    • Perales M, Portoles S, Mas P (2006) The proteasome-dependent degradation of CKB4 is regulated by the Arabidopsis biological clock. Plant J 46: 849-860
    • (2006) Plant J , vol.46 , pp. 849-860
    • Perales, M.1    Portoles, S.2    Mas, P.3
  • 78
    • 0037435395 scopus 로고    scopus 로고
    • Assumptionfree analysis of quantitative real-time polymerase chain reaction (PCR) data
    • Ramakers C, Ruijter JM, Deprez RHL, Moorman AFM (2003) Assumptionfree analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci Lett 339: 62-66
    • (2003) Neurosci Lett , vol.339 , pp. 62-66
    • Ramakers, C.1    Ruijter, J.M.2    Deprez, R.H.L.3    Moorman, A.F.M.4
  • 79
    • 0035032414 scopus 로고    scopus 로고
    • Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes
    • Rossberg M, Theres K, Acarkan A, Herrero R, Schmitt T, Schumacher K, Schmitz G, Schmidt R (2001) Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes. Plant Cell 13: 979-988
    • (2001) Plant Cell , vol.13 , pp. 979-988
    • Rossberg, M.1    Theres, K.2    Acarkan, A.3    Herrero, R.4    Schmitt, T.5    Schumacher, K.6    Schmitz, G.7    Schmidt, R.8
  • 80
    • 33746317015 scopus 로고    scopus 로고
    • How to be early flowering: An evolutionary perspective
    • Roux F, Touzet P, Cuguen J, Le Corre V (2006) How to be early flowering: an evolutionary perspective. Trends Plant Sci 11: 375-381
    • (2006) Trends Plant Sci , vol.11 , pp. 375-381
    • Roux, F.1    Touzet, P.2    Cuguen, J.3    Le Corre, V.4
  • 81
    • 33746767576 scopus 로고    scopus 로고
    • FLOWERING LOCUS C-dependent and -independent regulation of the circadian clock by the autonomous and vernalization pathways
    • Salathia N, Davis SJ, Lynn JR, Michaels SD, Amasino RM, Millar AJ (2007) FLOWERING LOCUS C-dependent and -independent regulation of the circadian clock by the autonomous and vernalization pathways. BMC Plant Biol 6: 10
    • (2007) BMC Plant Biol , vol.6 , pp. 10
    • Salathia, N.1    Davis, S.J.2    Lynn, J.R.3    Michaels, S.D.4    Amasino, R.M.5    Millar, A.J.6
  • 83
    • 0006180620 scopus 로고    scopus 로고
    • The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering
    • Schaffer R, Ramsay N, Samach A, Corden S, Putterill J, Carre IA, Coupland G (1998) The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering. Cell 93: 1219-1229
    • (1998) Cell , vol.93 , pp. 1219-1229
    • Schaffer, R.1    Ramsay, N.2    Samach, A.3    Corden, S.4    Putterill, J.5    Carre, I.A.6    Coupland, G.7
  • 85
    • 33751014556 scopus 로고    scopus 로고
    • The ABC's of comparative genomics in the Brassicaceae: Building blocks of crucifer genomes
    • Schranz ME, Lysak MA, Mitchell-Olds T (2006) The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes. Trends Plant Sci 11: 535-542
    • (2006) Trends Plant Sci , vol.11 , pp. 535-542
    • Schranz, M.E.1    Lysak, M.A.2    Mitchell-Olds, T.3
  • 86
    • 0036859948 scopus 로고    scopus 로고
    • Characterization and effects of the replicated flowering time gene FLC in Brassica rapa
    • Schranz ME, Quijada P, Sung SB, Lukens L, Amasino R, Osborn TC (2002) Characterization and effects of the replicated flowering time gene FLC in Brassica rapa. Genetics 162: 1457-1468
    • (2002) Genetics , vol.162 , pp. 1457-1468
    • Schranz, M.E.1    Quijada, P.2    Sung, S.B.3    Lukens, L.4    Amasino, R.5    Osborn, T.C.6
  • 87
    • 33751237950 scopus 로고    scopus 로고
    • Variation in the epigenetic silencing of FLC contributes to natural variation in Arabidopsis vernalization response
    • Shindo C, Lister C, Crevillen P, Nordborg M, Dean C (2006) Variation in the epigenetic silencing of FLC contributes to natural variation in Arabidopsis vernalization response. Genes Dev 20: 3079-3083
    • (2006) Genes Dev , vol.20 , pp. 3079-3083
    • Shindo, C.1    Lister, C.2    Crevillen, P.3    Nordborg, M.4    Dean, C.5
  • 88
    • 0037066492 scopus 로고    scopus 로고
    • Arabidopsis, the Rosetta stone of flowering time?
    • Simpson GG, Dean C (2002) Arabidopsis, the Rosetta stone of flowering time? Science 296: 285-289
    • (2002) Science , vol.296 , pp. 285-289
    • Simpson, G.G.1    Dean, C.2
  • 89
    • 33751228457 scopus 로고    scopus 로고
    • Intrageneric phylogeny of Capsella (Brassicaceae) and the origin of the tetraploid C. bursa-pastoris based on chloroplast and nuclear DNA sequences
    • Slotte T, Ceplitis A, Neuffer B, Hurka H, Lascoux M (2006) Intrageneric phylogeny of Capsella (Brassicaceae) and the origin of the tetraploid C. bursa-pastoris based on chloroplast and nuclear DNA sequences. Am J Bot 93: 1714-1724
    • (2006) Am J Bot , vol.93 , pp. 1714-1724
    • Slotte, T.1    Ceplitis, A.2    Neuffer, B.3    Hurka, H.4    Lascoux, M.5
  • 92
    • 0347717907 scopus 로고    scopus 로고
    • Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3
    • Sung SB, Amasino RM (2004) Vernalization in Arabidopsis thaliana is mediated by the PHD finger protein VIN3. Nature 427: 159-164
    • (2004) Nature , vol.427 , pp. 159-164
    • Sung, S.B.1    Amasino, R.M.2
  • 93
    • 33847611493 scopus 로고    scopus 로고
    • Small RNA-mediated chromatin silencing directed to the 3′ region of the Arabidopsis gene encoding the developmental regulator, FLC
    • Swiezewski S, Crevillen P, Liu FQ, Ecker JR, Jerzmanowski A, Dean C (2007) Small RNA-mediated chromatin silencing directed to the 3′ region of the Arabidopsis gene encoding the developmental regulator, FLC. Proc Natl Acad Sci USA 104: 3633-3638
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 3633-3638
    • Swiezewski, S.1    Crevillen, P.2    Liu, F.Q.3    Ecker, J.R.4    Jerzmanowski, A.5    Dean, C.6
  • 94
    • 0025133298 scopus 로고
    • Endogenous gibberellins in Arabidopsis thaliana and possible steps blocked in the biosynthetic pathways of the semidwarf ga4 and ga5 mutants
    • Talon M, Koornneef M, Zeevaart JAD (1990) Endogenous gibberellins in Arabidopsis thaliana and possible steps blocked in the biosynthetic pathways of the semidwarf ga4 and ga5 mutants. Proc Natl Acad Sci USA 87: 7983-7987
    • (1990) Proc Natl Acad Sci USA , vol.87 , pp. 7983-7987
    • Talon, M.1    Koornneef, M.2    Zeevaart, J.A.D.3
  • 97
    • 14844299375 scopus 로고    scopus 로고
    • Implementing false discovery rate control: Increasing your power
    • Verhoeven KJF, Simonsen KL, McIntyre LM (2005) Implementing false discovery rate control: increasing your power. Oikos 108: 643-647
    • (2005) Oikos , vol.108 , pp. 643-647
    • Verhoeven, K.J.F.1    Simonsen, K.L.2    McIntyre, L.M.3
  • 98
    • 0033180580 scopus 로고    scopus 로고
    • Time to flowering in brown midrib mutants of maize: An alternative approach to the analysis of developmental traits
    • Vermerris W, McIntyre LM (1999) Time to flowering in brown midrib mutants of maize: an alternative approach to the analysis of developmental traits. Heredity 83: 171-178
    • (1999) Heredity , vol.83 , pp. 171-178
    • Vermerris, W.1    McIntyre, L.M.2
  • 99
    • 85047686333 scopus 로고    scopus 로고
    • The maize Brown midrib1 locus affects cell wall composition and plant development in a dose-dependent manner
    • Vermerris W, Thompson KJ, McIntyre LM (2002) The maize Brown midrib1 locus affects cell wall composition and plant development in a dose-dependent manner. Heredity 88: 450-457
    • (2002) Heredity , vol.88 , pp. 450-457
    • Vermerris, W.1    Thompson, K.J.2    McIntyre, L.M.3
  • 100
    • 2942585382 scopus 로고    scopus 로고
    • Evidence for an evolutionarily conserved interaction between cell wall biosynthesis and flowering in maize and sorghum
    • Vermerris W, Thompson KJ, McIntyre LM, Axtell JD (2002) Evidence for an evolutionarily conserved interaction between cell wall biosynthesis and flowering in maize and sorghum. BMC Evol Biol 2: 2
    • (2002) BMC Evol Biol , vol.2 , pp. 2
    • Vermerris, W.1    Thompson, K.J.2    McIntyre, L.M.3    Axtell, J.D.4
  • 101
    • 33745402347 scopus 로고    scopus 로고
    • Nonadditive regulation of FRI and FLC loci mediates flowering-time variation in Arabidopsis allopolyploids
    • Wang JL, Tian L, Lee HS, Chen ZJ (2006) Nonadditive regulation of FRI and FLC loci mediates flowering-time variation in Arabidopsis allopolyploids. Genetics 173: 965-974
    • (2006) Genetics , vol.173 , pp. 965-974
    • Wang, J.L.1    Tian, L.2    Lee, H.S.3    Chen, Z.J.4
  • 102
    • 0032568796 scopus 로고    scopus 로고
    • Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression
    • Wang ZY, Tobin EM (1998) Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression. Cell 93: 1207-1217
    • (1998) Cell , vol.93 , pp. 1207-1217
    • Wang, Z.Y.1    Tobin, E.M.2
  • 103
    • 0037069380 scopus 로고    scopus 로고
    • Combining mapping and arraying: An approach to candidate gene identification
    • Wayne ML, McIntyre LM (2002) Combining mapping and arraying: an approach to candidate gene identification. Proc Natl Acad Sci USA 99: 14903-14906
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 14903-14906
    • Wayne, M.L.1    McIntyre, L.M.2
  • 104
  • 105
    • 0036007916 scopus 로고    scopus 로고
    • Arabidopsis RGL1 encodes a negative regulator of gibberellin responses
    • Wen CK, Chang C (2002) Arabidopsis RGL1 encodes a negative regulator of gibberellin responses. Plant Cell 14: 87-100
    • (2002) Plant Cell , vol.14 , pp. 87-100
    • Wen, C.K.1    Chang, C.2
  • 106
    • 14044271573 scopus 로고    scopus 로고
    • Quantitative trait locus mapping and DNA array hybridization identify an FLM deletion as a cause for natural floweringtime variation
    • Werner JD, Borevitz JO, Warthmann N, Trainer GT, Ecker JR, Chory J, Weigel D (2005) Quantitative trait locus mapping and DNA array hybridization identify an FLM deletion as a cause for natural floweringtime variation. Proc Natl Acad Sci USA 102: 2460-2465
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 2460-2465
    • Werner, J.D.1    Borevitz, J.O.2    Warthmann, N.3    Trainer, G.T.4    Ecker, J.R.5    Chory, J.6    Weigel, D.7
  • 108
    • 33749234963 scopus 로고    scopus 로고
    • The Arabidopsis thaliana vernalization response requires a polycomb-like protein complex that also includes VERNALIZATION INSENSITIVE 3
    • Wood CC, Robertson M, Tanner G, Peacock WJ, Dennis ES, Helliwell CA (2006) The Arabidopsis thaliana vernalization response requires a polycomb-like protein complex that also includes VERNALIZATION INSENSITIVE 3. Proc Natl Acad Sci USA 103: 14631-14636
    • (2006) Proc Natl Acad Sci USA , vol.103 , pp. 14631-14636
    • Wood, C.C.1    Robertson, M.2    Tanner, G.3    Peacock, W.J.4    Dennis, E.S.5    Helliwell, C.A.6
  • 109
    • 0029046366 scopus 로고
    • The GA5 locus of Arabidopsis thaliana encodes a multifunctional gibberellin 20-oxidase: Molecular cloning and functional expression
    • Xu Y, Li L, Wu K, Peeters AJM, Gage DA, Zeevaart JAD (1995) The GA5 locus of Arabidopsis thaliana encodes a multifunctional gibberellin 20-oxidase: molecular cloning and functional expression. Proc Natl Acad Sci USA 92: 6640-6644
    • (1995) Proc Natl Acad Sci USA , vol.92 , pp. 6640-6644
    • Xu, Y.1    Li, L.2    Wu, K.3    Peeters, A.J.M.4    Gage, D.A.5    Zeevaart, J.A.D.6
  • 111
    • 17844387345 scopus 로고    scopus 로고
    • Comparative genome analyses of Arabidopsis spp.: Inferring chromosomal rearrangement events in the evolutionary history of A. thaliana
    • Yogeeswaran K, Frary A, York TL, Amenta A, Lesser AH, Nasrallah JB, Tanksley SD, Nasrallah ME (2005) Comparative genome analyses of Arabidopsis spp.: inferring chromosomal rearrangement events in the evolutionary history of A. thaliana. Genome Res 15: 505-515
    • (2005) Genome Res , vol.15 , pp. 505-515
    • Yogeeswaran, K.1    Frary, A.2    York, T.L.3    Amenta, A.4    Lesser, A.H.5    Nasrallah, J.B.6    Tanksley, S.D.7    Nasrallah, M.E.8
  • 112
    • 0036733292 scopus 로고    scopus 로고
    • The VERNALIZATION INDEPENDENCE 4 gene encodes a novel regulator of FLOWERING LOCUS C
    • Zhang H, van Nocker S (2002) The VERNALIZATION INDEPENDENCE 4 gene encodes a novel regulator of FLOWERING LOCUS C. Plant J 31: 663-673
    • (2002) Plant J , vol.31 , pp. 663-673
    • Zhang, H.1    van Nocker, S.2
  • 113
    • 33846466407 scopus 로고    scopus 로고
    • Zhao KY, Aranzana MJ, Kim S, Lister C, Shindo C, Tang CL, Toomajian C, Zheng HG, Dean C, Marjoram P, et al (2007) An Arabidopsis example of association mapping in structured samples. PLoS Genetics 3: e4
    • Zhao KY, Aranzana MJ, Kim S, Lister C, Shindo C, Tang CL, Toomajian C, Zheng HG, Dean C, Marjoram P, et al (2007) An Arabidopsis example of association mapping in structured samples. PLoS Genetics 3: e4


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