-
1
-
-
0343953493
-
Comparative genome analysis reveals extensive conservation of genome organisation for Arabidopsis thaliana and Capsella rubella
-
ACARKAN, A., M. ROSSBERG, M. KOCH, AND R. SCHMIDT. 2000. Comparative genome analysis reveals extensive conservation of genome organisation for Arabidopsis thaliana and Capsella rubella. Plant Journal 23: 55-62.
-
(2000)
Plant Journal
, vol.23
, pp. 55-62
-
-
Acarkan, A.1
Rossberg, M.2
Koch, M.3
Schmidt, R.4
-
4
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
ARABIDOPSIS GENOME INITIATIVE
-
ARABIDOPSIS GENOME INITIATIVE. 2000. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
5
-
-
0036270606
-
Systematics of the halimolobine Brassicaceae: Evidence from three loci and morphology
-
BAILEY, C. D., R. A. PRICE, AND J. J. DOYLE. 2002. Systematics of the halimolobine Brassicaceae: evidence from three loci and morphology. Systematic Botany 27: 318-332.
-
(2002)
Systematic Botany
, vol.27
, pp. 318-332
-
-
Bailey, C.D.1
Price, R.A.2
Doyle, J.J.3
-
6
-
-
0029149631
-
Mitochondrial portraits of human-populations using median networks
-
BANDELT, H. J., P. FORSTER, B. C. SYKES, AND M. B. RICHARDS. 1995. Mitochondrial portraits of human-populations using median networks. Genetics 141: 743-753.
-
(1995)
Genetics
, vol.141
, pp. 743-753
-
-
Bandelt, H.J.1
Forster, P.2
Sykes, B.C.3
Richards, M.B.4
-
7
-
-
3042586217
-
The Arabidopsis genome sequence as a tool for genome analysis in Brassicaceae: A comparison of the Arabidopsis and Capsella rubella genomes
-
BOIVIN, K., A. ACARKAN, R. S. MBULU, O. CLARENZ, AND R. SCHMIDT. 2004. The Arabidopsis genome sequence as a tool for genome analysis in Brassicaceae: a comparison of the Arabidopsis and Capsella rubella genomes. Plant Physiology 135: 735-744.
-
(2004)
Plant Physiology
, vol.135
, pp. 735-744
-
-
Boivin, K.1
Acarkan, A.2
Mbulu, R.S.3
Clarenz, O.4
Schmidt, R.5
-
8
-
-
33746719346
-
Bayesian inference of evolutionary history from chloroplast microsatellites in the cosmopolitan weed Capsella bursa-pastoris (Brassicaceae)
-
CEPLITIS, A., Y. T. SU, AND M. LASCOUX. 2005. Bayesian inference of evolutionary history from chloroplast microsatellites in the cosmopolitan weed Capsella bursa-pastoris (Brassicaceae). Molecular Ecology 14: 4221-4233.
-
(2005)
Molecular Ecology
, vol.14
, pp. 4221-4233
-
-
Ceplitis, A.1
Su, Y.T.2
Lascoux, M.3
-
9
-
-
80051666326
-
Capsella
-
T. G. Tutin, H. Heywood, N. A. Burges, D. M. Moore, D. H. Valentine, S. M. Walters, and D. A. Webb [eds.], Cambridge University Press, Cambridge, UK
-
CHATER, A. O. 1993. Capsella. In T. G. Tutin, H. Heywood, N. A. Burges, D. M. Moore, D. H. Valentine, S. M. Walters, and D. A. Webb [eds.], Flora Europaea, 316. Cambridge University Press, Cambridge, UK.
-
(1993)
Flora Europaea
, vol.316
-
-
Chater, A.O.1
-
10
-
-
0036935345
-
PCR-mediated recombination in amplification products derived from polyploid cotton
-
CRONN, R., M. CEDRONI, T. HASELKORN, C. GROBER, AND J. F. WENDEL. 2002. PCR-mediated recombination in amplification products derived from polyploid cotton. Theoretical and Applied Genetics 104: 482-489.
-
(2002)
Theoretical and Applied Genetics
, vol.104
, pp. 482-489
-
-
Cronn, R.1
Cedroni, M.2
Haselkorn, T.3
Grober, C.4
Wendel, J.F.5
-
11
-
-
0346127430
-
Cryptic trysts, genomic mergers, and plant speciation
-
CRONN, R., AND J. F. WENDEL. 2003. Cryptic trysts, genomic mergers, and plant speciation. New Phytologist 161: 133-142.
-
(2003)
New Phytologist
, vol.161
, pp. 133-142
-
-
Cronn, R.1
Wendel, J.F.2
-
12
-
-
0029240502
-
A set of universal primers for amplification of polymorphic noncoding regions of mitochondrial and chloroplast DNA in plants
-
DEMESURE, B., N. SODZI, AND R. J. PETIT. 1995. A set of universal primers for amplification of polymorphic noncoding regions of mitochondrial and chloroplast DNA in plants. Molecular Ecology 4: 129-131.
-
(1995)
Molecular Ecology
, vol.4
, pp. 129-131
-
-
Demesure, B.1
Sodzi, N.2
Petit, R.J.3
-
13
-
-
0346758118
-
Diploid and polyploid reticulate evolution throughout the history of the perennial soybeans (Glycine subgenus Glycine)
-
DOYLE, J. J., J. L. DOYLE, J. T. RAUSCHER, AND A. H. D. BROWN. 2003. Diploid and polyploid reticulate evolution throughout the history of the perennial soybeans (Glycine subgenus Glycine). New Phytologist 161: 121-132.
-
(2003)
New Phytologist
, vol.161
, pp. 121-132
-
-
Doyle, J.J.1
Doyle, J.L.2
Rauscher, J.T.3
Brown, A.H.D.4
-
14
-
-
0019797407
-
Evolutionary trees from DNA sequences: A maximum likelihood approach
-
FELSENSTEIN, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. Journal of Molecular Evolution 17: 368-376.
-
(1981)
Journal of Molecular Evolution
, vol.17
, pp. 368-376
-
-
Felsenstein, J.1
-
16
-
-
0003985293
-
-
Columbia University Press, New York, New York, USA
-
GRANT, V. 1963. The origin of adaptations. Columbia University Press, New York, New York, USA.
-
(1963)
The Origin of Adaptations
-
-
Grant, V.1
-
17
-
-
0004042690
-
-
Columbia University Press, New York, New York, USA
-
GRANT, V. 1981. Plant speciation. Columbia University Press, New York, New York, USA.
-
(1981)
Plant Speciation
-
-
Grant, V.1
-
18
-
-
0022376704
-
Dating the human-ape splitting by a molecular clock of mitochondrial DNA
-
HASEGAWA, M., H. KISHINO, AND T.-A. YANO. 1985. Dating the human-ape splitting by a molecular clock of mitochondrial DNA. Journal of Molecular Evolution 22: 160-174.
-
(1985)
Journal of Molecular Evolution
, vol.22
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.-A.3
-
19
-
-
1342347024
-
Spectronet: A package for computing spectra and median networks
-
HUBER, K., T. HUBER, M. LANGTON, D. PENNY, V. MOULTON, AND M. HENDY. 2002. Spectronet: a package for computing spectra and median networks. Applied Bioinformatics 1: 159-161.
-
(2002)
Applied Bioinformatics
, vol.1
, pp. 159-161
-
-
Huber, K.1
Huber, T.2
Langton, M.3
Penny, D.4
Moulton, V.5
Hendy, M.6
-
20
-
-
0028003556
-
Genetic control of plastidic L-glutamate dehydrogenase isozymes in the genus Capsella (Brassicaceae)
-
HURKA, H., AND S. DÜRING. 1994. Genetic control of plastidic L-glutamate dehydrogenase isozymes in the genus Capsella (Brassicaceae). Heredity 72: 126-131.
-
(1994)
Heredity
, vol.72
, pp. 126-131
-
-
Hurka, H.1
Düring, S.2
-
21
-
-
0024618031
-
Aspartate aminotransferase isozymes in the genus Capsella (Brassicaceae): Subcellular location, gene duplication, and polymorphism
-
HURKA, H., S. FREUNDNER, A. H. D. BROWN, AND U. PLANTHOLT. 1989. Aspartate aminotransferase isozymes in the genus Capsella (Brassicaceae): subcellular location, gene duplication, and polymorphism. Biochemical Genetics 27: 77-90.
-
(1989)
Biochemical Genetics
, vol.27
, pp. 77-90
-
-
Hurka, H.1
Freundner, S.2
Brown, A.H.D.3
Plantholt, U.4
-
22
-
-
0030916073
-
Evolutionary processes in the genus Capsella (Brassicaceae)
-
HURKA, H., AND B. NEUFFER. 1997. Evolutionary processes in the genus Capsella (Brassicaceae). Plant Systematics and Evolution 206: 295-316.
-
(1997)
Plant Systematics and Evolution
, vol.206
, pp. 295-316
-
-
Hurka, H.1
Neuffer, B.2
-
23
-
-
33646890870
-
A unique recent origin of the allotetraploid species Arabidopsis suecica: Evidence from nuclear DNA markers
-
JAKOBSSON, M., J. HAGENBLAD, S. TAVARÉ, T. SÄLL, C. HALLDÉN, C. LINDHALLDÉN, AND M. NORDBORG. 2006. A unique recent origin of the allotetraploid species Arabidopsis suecica: evidence from nuclear DNA markers. Molecular Biology and Evolution 23: 1217-1231.
-
(2006)
Molecular Biology and Evolution
, vol.23
, pp. 1217-1231
-
-
Jakobsson, M.1
Hagenblad, J.2
Tavaré, S.3
Säll, T.4
Halldén, C.5
Lindhalldén, C.6
Nordborg, M.7
-
24
-
-
18844404205
-
Evolution of genome size in Brassicaceae
-
JOHNSTON, J. S., A. E. PEPPER, A. E. HALL, Z. J. CHEN, G. HODNETT, J. DRABEK, R. LOPEZ, AND H. J. PRICE. 2005. Evolution of genome size in Brassicaceae. Annals of Botany 95: 229-235.
-
(2005)
Annals of Botany
, vol.95
, pp. 229-235
-
-
Johnston, J.S.1
Pepper, A.E.2
Hall, A.E.3
Chen, Z.J.4
Hodnett, G.5
Drabek, J.6
Lopez, R.7
Price, H.J.8
-
26
-
-
0038613484
-
Molecular systematics, evolution, and population biology in the mustard family (Brassicaceae)
-
KOCH, M., I. A. AL-SHEHBAZ, AND K. MUMMENHOFF. 2003. Molecular systematics, evolution, and population biology in the mustard family (Brassicaceae). Annals of the Missouri Botanical Garden 90: 151-171.
-
(2003)
Annals of the Missouri Botanical Garden
, vol.90
, pp. 151-171
-
-
Koch, M.1
Al-Shehbaz, I.A.2
Mummenhoff, K.3
-
27
-
-
0032694941
-
Molecular systematics and evolution of Arabidopsis and Arabis
-
KOCH, M., J. BISHOP, AND T. MITCHELL-OLDS. 1999. Molecular systematics and evolution of Arabidopsis and Arabis. Plant Biology 1: 529-537.
-
(1999)
Plant Biology
, vol.1
, pp. 529-537
-
-
Koch, M.1
Bishop, J.2
Mitchell-Olds, T.3
-
28
-
-
0033804889
-
Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae)
-
KOCH, M. A., B. HAUBOLD, AND T. MITCHELL-OLDS. 2000. Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis, and related genera (Brassicaceae). Molecular Biology and Evolution 17: 1483-1498.
-
(2000)
Molecular Biology and Evolution
, vol.17
, pp. 1483-1498
-
-
Koch, M.A.1
Haubold, B.2
Mitchell-Olds, T.3
-
29
-
-
0001692896
-
Molecular systematics of the Brassicaceae: Evidence from coding plastidic matK and nuclear Chs sequences
-
KOCH, M., B. HAUBOLD, AND T. MITCHELL-OLDS. 2001. Molecular systematics of the Brassicaceae: evidence from coding plastidic matK and nuclear Chs sequences. American Journal of Botany 88: 534-544.
-
(2001)
American Journal of Botany
, vol.88
, pp. 534-544
-
-
Koch, M.1
Haubold, B.2
Mitchell-Olds, T.3
-
30
-
-
3242810318
-
MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment
-
KUMAR, S., K. TAMURA, AND M. NEI. 2004. MEGA3: integrated software for molecular evolutionary genetics analysis and sequence alignment. Briefings in Bioinformatics 5: 150-163.
-
(2004)
Briefings in Bioinformatics
, vol.5
, pp. 150-163
-
-
Kumar, S.1
Tamura, K.2
Nei, M.3
-
31
-
-
0037168614
-
Allopolyploidization and evolution of species with reduced floral structures in Lepidium L. (Brassicaceae)
-
LEE, J. Y., K. MUMMENHOFF, AND J. L. BOWMAN. 2002. Allopolyploidization and evolution of species with reduced floral structures in Lepidium L. (Brassicaceae). Proceedings of the National Academy of Sciences, USA 99: 16835-16840.
-
(2002)
Proceedings of the National Academy of Sciences, USA
, vol.99
, pp. 16835-16840
-
-
Lee, J.Y.1
Mummenhoff, K.2
Bowman, J.L.3
-
32
-
-
17044416291
-
Reconstructing patterns of reticulate evolution in plants
-
LINDER, C. R., AND L. H. RIESEBERG. 2004. Reconstructing patterns of reticulate evolution in plants. American Journal of Botany 91: 1700-1708.
-
(2004)
American Journal of Botany
, vol.91
, pp. 1700-1708
-
-
Linder, C.R.1
Rieseberg, L.H.2
-
33
-
-
16344369286
-
Genome evolution of allopolyploids: A process of cytological and genetic diploidization
-
MA, X.-F., AND J. P. GUSTAFSON. 2005. Genome evolution of allopolyploids: a process of cytological and genetic diploidization. Cytogenetic and Genome Research 109: 236-249.
-
(2005)
Cytogenetic and Genome Research
, vol.109
, pp. 236-249
-
-
Ma, X.-F.1
Gustafson, J.P.2
-
34
-
-
0028184403
-
Stomatal size in fossil plants: Evidence for polyploidy in majority of angiosperms
-
MASTERSON, J. 1994. Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms. Science 264: 421-423.
-
(1994)
Science
, vol.264
, pp. 421-423
-
-
Masterson, J.1
-
35
-
-
0001139997
-
Evolution of the tetraploid Capsella bursa-pastoris (Brassicaceae): Isoelectric focusing analysis of Rubisco
-
MUMMENHOFF, K., AND H. HURKA. 1990. Evolution of the tetraploid Capsella bursa-pastoris (Brassicaceae): isoelectric focusing analysis of Rubisco. Plant Systematics and Evolution 172: 205-213.
-
(1990)
Plant Systematics and Evolution
, vol.172
, pp. 205-213
-
-
Mummenhoff, K.1
Hurka, H.2
-
36
-
-
0004275709
-
-
Columbia University Press, New York, New York, USA
-
NEI, M. 1987. Molecular evolutionary genetics. Columbia University Press, New York, New York, USA.
-
(1987)
Molecular Evolutionary Genetics
-
-
Nei, M.1
-
37
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
NEI, M., AND T. GOJOBORI. 1986. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Molecular Biology and Evolution 3: 418-426.
-
(1986)
Molecular Biology and Evolution
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
38
-
-
0034623005
-
T-Coffee: A novel method for fast and accurate multiple sequence alignment
-
NOTREDAME, C., D. G. HIGGINS, AND J. HERINGA. 2000. T-Coffee: a novel method for fast and accurate multiple sequence alignment. Journal of Molecular Biology 302: 205-217.
-
(2000)
Journal of Molecular Biology
, vol.302
, pp. 205-217
-
-
Notredame, C.1
Higgins, D.G.2
Heringa, J.3
-
39
-
-
0023822631
-
Relationship between gene trees and species trees
-
PAMILO, P., AND M. NEI. 1988. Relationship between gene trees and species trees. Molecular Biology and Evolution 5: 568-583.
-
(1988)
Molecular Biology and Evolution
, vol.5
, pp. 568-583
-
-
Pamilo, P.1
Nei, M.2
-
40
-
-
0031773680
-
MODELTEST: Testing the model of DNA substitution
-
POSADA, D., AND K. A. CRANDALL. 1998. MODELTEST: testing the model of DNA substitution. Bioinformatics 14: 817-818.
-
(1998)
Bioinformatics
, vol.14
, pp. 817-818
-
-
Posada, D.1
Crandall, K.A.2
-
41
-
-
0032422925
-
Pathways, mechanisms and rates of polyploid formation in flowering plants
-
RAMSEY, J., AND D. W. SCHEMSKE. 1998. Pathways, mechanisms and rates of polyploid formation in flowering plants. Annual Review of Ecology and Systematics 29: 467-501.
-
(1998)
Annual Review of Ecology and Systematics
, vol.29
, pp. 467-501
-
-
Ramsey, J.1
Schemske, D.W.2
-
42
-
-
0036245438
-
Genealogical trees, coalescent theory and the analysis of genetic polymorphisms
-
ROSENBERG, N. A., AND M. NORDBORG. 2002. Genealogical trees, coalescent theory and the analysis of genetic polymorphisms. Nature Reviews Genetics 3: 380-390.
-
(2002)
Nature Reviews Genetics
, vol.3
, pp. 380-390
-
-
Rosenberg, N.A.1
Nordborg, M.2
-
43
-
-
0035032414
-
Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes
-
ROSSBERG, M., K. THERES, A. ACARKAN, R. HERRERO, T. SCHMITT, K. SCHUMACHER, G. SCHMITZ, AND R. SCHMIDT. 2001. Comparative sequence analysis reveals extensive microcolinearity in the lateral suppressor regions of the tomato, Arabidopsis, and Capsella genomes. Plant Cell 13: 979-988.
-
(2001)
Plant Cell
, vol.13
, pp. 979-988
-
-
Rossberg, M.1
Theres, K.2
Acarkan, A.3
Herrero, R.4
Schmitt, T.5
Schumacher, K.6
Schmitz, G.7
Schmidt, R.8
-
44
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
ROZAS, J., J. C. SANCHEZ-DEL BARRIO, X. MESSEGUER, AND R. ROZAS. 2003. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 19: 2496-2497.
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sanchez-Del Barrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
45
-
-
0043241879
-
Chloroplast DNA indicates a single origin of the allotetraploid Arabidopsis suecica
-
SÄLL, T., M. JAKOBSSON, C. LIND-HALLDEN, AND C. HALLDEN. 2003. Chloroplast DNA indicates a single origin of the allotetraploid Arabidopsis suecica. Journal of Evolutionary Biology 16: 1019-1029.
-
(2003)
Journal of Evolutionary Biology
, vol.16
, pp. 1019-1029
-
-
Säll, T.1
Jakobsson, M.2
Lind-Hallden, C.3
Hallden, C.4
-
46
-
-
14944367310
-
Mode of reproduction in Arabidopsis suecica
-
SÄLL, T., C. LIND-HALLDÉN, M. JAKOBSSON, AND C. HALLDÉN. 2004. Mode of reproduction in Arabidopsis suecica. Hereditas 141: 313-317.
-
(2004)
Hereditas
, vol.141
, pp. 313-317
-
-
Säll, T.1
Lind-Halldén, C.2
Jakobsson, M.3
Halldén, C.4
-
48
-
-
0037109058
-
The hidden duplication past of Arabidopsis thaliana
-
SIMILLION, C., K. VANDEPOELE, M. C. VAN MONTAGU, M. Z. ZABEAU, AND Y. VAN DE PEER. 2002. The hidden duplication past of Arabidopsis thaliana. Proceedings of the National Academy of Sciences, USA 99: 13627-13632.
-
(2002)
Proceedings of the National Academy of Sciences, USA
, vol.99
, pp. 13627-13632
-
-
Simillion, C.1
Vandepoele, K.2
Van Montagu, M.C.3
Zabeau, M.Z.4
Van De Peer, Y.5
-
52
-
-
0347388384
-
Advances in the study of polyploidy since Plant speciation
-
SOLTIS, D. E., P. S. SOLTIS, AND J. A. TATE. 2003. Advances in the study of polyploidy since Plant speciation. New Phytologist 161: 173-191.
-
(2003)
New Phytologist
, vol.161
, pp. 173-191
-
-
Soltis, D.E.1
Soltis, P.S.2
Tate, J.A.3
-
55
-
-
0004248459
-
-
Sinauer, Sunderland, Massachusetts, USA
-
SWOFFORD, D. L. 2002. PAUP*: phylogenetic analysis using parsimony (*and other methods), version 4. Sinauer, Sunderland, Massachusetts, USA.
-
(2002)
PAUP*: Phylogenetic Analysis Using Parsimony (*And Other Methods), Version 4
-
-
Swofford, D.L.1
-
56
-
-
33744668865
-
Simple methods for testing molecular clock hypothesis
-
TAJIMA, F. 1993. Simple methods for testing molecular clock hypothesis. Genetics 123: 597-601.
-
(1993)
Genetics
, vol.123
, pp. 597-601
-
-
Tajima, F.1
-
57
-
-
0033974956
-
Genome evolution in polyploids
-
WENDEL, J. F. 2000. Genome evolution in polyploids. Plant Molecular Biology 42: 225-249.
-
(2000)
Plant Molecular Biology
, vol.42
, pp. 225-249
-
-
Wendel, J.F.1
-
58
-
-
0033299909
-
Molecular evidence for allopolyploid speciation and a single origin of the narrow endemic Draba ladina (Brassicaceae)
-
WIDMER, A., AND M. BALTISBERGER. 1999. Molecular evidence for allopolyploid speciation and a single origin of the narrow endemic Draba ladina (Brassicaceae). American Journal of Botany 86: 1282-1289.
-
(1999)
American Journal of Botany
, vol.86
, pp. 1282-1289
-
-
Widmer, A.1
Baltisberger, M.2
-
59
-
-
0035344021
-
Yesterday's polyploids and the mystery of diploidization
-
WOLFE, K. H. 2003. Yesterday's polyploids and the mystery of diploidization. Nature Reviews Genetics 2: 333-341.
-
(2003)
Nature Reviews Genetics
, vol.2
, pp. 333-341
-
-
Wolfe, K.H.1
-
60
-
-
0033510806
-
Phylogenetic relationships in tribe Lepidieae (Brassicaceae) based on chloroplast DNA restriction site variation
-
ZUNK, K., K. MUMMENHOFF, AND H. HURKA. 1999. Phylogenetic relationships in tribe Lepidieae (Brassicaceae) based on chloroplast DNA restriction site variation. Canadian Journal of Botany 77: 1504-1512.
-
(1999)
Canadian Journal of Botany
, vol.77
, pp. 1504-1512
-
-
Zunk, K.1
Mummenhoff, K.2
Hurka, H.3
|