Quantitative trait locus mapping and DNA array hybridization identify an FLM deletion as a cause for natural flowering-time variation

Proceedings of the National Academy of Sciences of the United States of America

Volumn 102, Issue 7, 2005, Pages 2460-2465

  Werner, Jonathan D ^a,c   Borevitz, Justin O ^a,c,d   Warthmann, Norman ^e   Trainer, Gabriel T ^a,b   Ecker, Joseph R ^a   Chory, Joanne ^a,b   Weigel, Detlef ^a,e  

^a SALK INSTITUTE FOR BIOLOGICAL STUDIES   (United States)

^b HOWARD HUGHES MEDICAL INSTITUTE   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

^d UNIVERSITY OF CHICAGO   (United States)

^e MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

GENOMIC DNA; TRANSCRIPTION FACTOR;

ALLELISM; ARABIDOPSIS; ARTICLE; DNA DETERMINATION; DNA HYBRIDIZATION; DNA MICROARRAY; FLC GENE; FLM GENE; FLOWERING; FLW1 GENE; FRI GENE; GENE; GENE DELETION; GENE IDENTIFICATION; GENE LOCUS; GENE REPRESSION; GENETIC COMPLEMENTATION; GENETIC VARIABILITY; INBRED STRAIN; NONHUMAN; PLANT GROWTH; PRIORITY JOURNAL; QUANTITATIVE TRAIT LOCUS MAPPING;

ALLELES; ARABIDOPSIS; ARABIDOPSIS PROTEINS; BASE SEQUENCE; CHROMOSOME MAPPING; DNA, PLANT; FLOWERS; GENE DELETION; GENES, PLANT; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PLANTS, GENETICALLY MODIFIED; QUANTITATIVE TRAIT LOCI; VARIATION (GENETICS);

ARABIDOPSIS; ARABIDOPSIS THALIANA;

EID: 14044271573     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0409474102     Document Type: Article

References (37)

1. Sheldon, C. C., Burn, J. E., Perez, P. P., Metzger, J., Edwards, J. A., Peacock, W. J. & Dennis, E. S. (1999) Plant Cell 11, 445-458,
2. Michaels, S. D. & Amasino, R. M. (1999) Plant Cell 11, 949-956.
3. Michaels, S. D., Bezerra, I. C. & Amasino, R. M. (2004) Proc. Natl. Acad. Sci. USA 101, 3281-3285.
4. Henderson, I. R., Shindo, C. & Dean, C. (2003) Annu. Rev. Genet. 37, 371-392.
5. Bastow, R., Mylne, J. S., Lister, C., Lippman, Z., Martienssen, R. A. & Dean, C. (2004) Nature 427, 164-167.
6. Sung, S. & Amasino, R. M. (2004) Nature 427, 159-164.
7. He, Y., Michaels, S. D. & Amasino, R. M. (2003) Science 302, 1751-1754.
8. Gazzani, S., Gendall, A. R., Lister, C. & Dean, C. (2003) Plant Physiol. 132, 1107-1114.
9. Johanson, U., West, J., Lister, C., Michaels, S., Amasino, R. & Dean, C. (2000) Science 290, 344-347.
10. Le Corre, V., Roux, F. & Reboud, X. (2002) Mol. Biol. Evol. 19, 1261-1271.
11. Koornneef, M., Blankestijn-de Vries, H., Hanhart, C., Soppe, W. & Peeters, T. (1994) Plant J. 6, 911-919.
12. Lee, I., Michaels, S. D., Masshardt, A. S. & Amasino, R. M. (1994) Plant J. 6, 903-909.
13. Michaels, S. D., He, Y., Scortecci, K. C. & Amasino, R. M. (2003) Proc. Natl. Acad. Sci. USA 100, 10102-10107.
14. Sheldon, C. C, Conn, A. B., Dennis, E. S. & Peacock, W. J. (2002) Plant Cell 14, 2527-2537.
15. Nordborg, M. & Bergelson, J. (1999) Am. J. Bot. 86, 470-475.
16. Hagenblad, J., Tang, C, Molitor, J., Werner, J., Zheng, H., Marjoram, P., Weigel, D. & Nordborg, M. (2004) Genetics, in press.
17. Scortecci, K. C., Michaels, S. D. & Amasino, R. M. (2001) Plant J. 26, 229-236.
18. Ratcliffe, O. J., Nadzan, G. C., Reuber, T. L. & Riechmann, J. L. (2001) Plant Physiol. 126, 122-132.
19. Holub, E. B. & Beynon, J. L. (1997) Adv. Bot. Res. 24, 227-273.
20. Deslandes, L., Pileur, F., Liaubet, L., Gamut, S., Can, C, Williams, K., Holub, E., Beynon, J., Arlat, M. & Marco, Y. (1998) Mol. Plant Microbe Interact. 11, 659-667.
21. Tang, K., Fu, D. J., Julien, D., Braun, A., Cantor, C. R. & Köster, H. (1999) Proc. Natl. Acad. Sci. USA 96, 10016-10020.
22. Konieczny, A. & Ausubel, F. M. (1993) Plant J. 4, 403-410.
23. Lander, E. S., Green, P., Abrahamson, J., Barlow, A., Day, M. J., Lincoln, S. E. & Newberg, L. (1987) Genomics 1, 174-181.
24. The Arabidopsis Genome Initiative (2000) Nature 408, 796-815.
25. Doerge, R. W. & Churchill, G. A. (1996) Genetics 142, 285-294.
26. Borevitz, J. O., Maloof, J. N., Lutes, J., Dabi, T., Redfern, J. L., Trainer, G. T., Werner, J. D., Asami, T., Berry, C. C., Weigel, D. & Chory, J. (2002) Genetics 160, 683-696.
27. Hajdukiewicz, P., Svab, Z. & Maliga, P. (1994) Plant Mol. Biol. 25, 989-994.
28. Lister, C. & Dean, C. (1993) Plant J. 4, 745-750.
29. Alonso-Blanco, C, Peeters, A. J., Koornneef, M., Lister, C., Dean, C., van den Bosch, N., Pot, J. & Kuiper, M. T. (1998) Plant J. 14, 259-271.
30. Borevitz, J. O., Liang, D., Plouffe, D., Chang, H.-S., Zhu, T., Weigel, D., Berry, C. C., Winzeler, E. & Chory, J. (2003) Genome Res. 13, 513-523.
31. Jiang, N., Bao, Z., Zhang, X., Eddy, S. R. & Wessler, S. R. (2004) Nature 431, 569-573.
32. Caicedo, A. L., Stinchcombe, J. R., Olsen, K. M., Schmitt, J. & Purugganan, M. D. (2004) Proc. Natl. Acad. Sci. USA 101, 15670-15675.
33. El-Assal, S. E.-D., Alonso-Blanco, C., Peeters, A. J., Raz, V. & Koornneef, M. (2001) Nat. Genet. 29, 435-440.
34. Loudet, O., Chaillou, S., Camilleri, C., Bouchez, D. & Daniel-Vedele, F. (2002) Theor. Appl. Genet. 104, 1173-1184.
35. Ratcliffe, O. J., Kumimoto, R. W., Wong, B. J. & Riechmann, J. L. (2003) Plant Cell 15, 1159-1169.
36. He, Y., Doyle, M. R. & Amasino, R. M. (2004) Genes Dev. 18, 2873-2878.
37. Oh, S., Zhang, H., Ludwig, P. & van Nocker, S. (2004) Plant Cell 16, 2940-2953.