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Volumn 140, Issue 4, 2006, Pages 1464-1474

Analysis of phase of LUCIFERASE expression reveals novel circadian quantitative trait loci in Arabidopsis

Author keywords

[No Author keywords available]

Indexed keywords

BIODIVERSITY; BIOLOGICAL ORGANS; PLANTS (BOTANY); PROTEINS;

EID: 33745469346     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.105.074518     Document Type: Article
Times cited : (30)

References (50)
  • 1
    • 0031747476 scopus 로고    scopus 로고
    • Analysis of natural allelic variation at flowering time loci in the Landsberg erecta and Cape Verde Islands ecotypes of Arabidopsis thaliana
    • Alonso-Blanco C, El-Assal SED, Coupland G, Koornneef M (1998a) Analysis of natural allelic variation at flowering time loci in the Landsberg erecta and Cape Verde Islands ecotypes of Arabidopsis thaliana. Genetics 149: 749-764
    • (1998) Genetics , vol.149 , pp. 749-764
    • Alonso-Blanco, C.1    El-Assal, S.E.D.2    Coupland, G.3    Koornneef, M.4
  • 2
    • 7144259092 scopus 로고    scopus 로고
    • Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population
    • Alonso-Blanco C, Peeters AJM, Koornneef M, Lister C, Dean C, van den Bosch N, Pot J, Kuiper MTR (1998b) Development of an AFLP based linkage map of Ler, Col and Cvi Arabidopsis thaliana ecotypes and construction of a Ler/Cvi recombinant inbred line population. Plant J 14: 259-271
    • (1998) Plant J , vol.14 , pp. 259-271
    • Alonso-Blanco, C.1    Peeters, A.J.M.2    Koornneef, M.3    Lister, C.4    Dean, C.5    Van Den Bosch, N.6    Pot, J.7    Kuiper, M.T.R.8
  • 3
    • 0031961197 scopus 로고    scopus 로고
    • Genetic variation within and among populations of Arabidopsis thaliana
    • Bergelson J, Stahl E, Dudek S, Kreitman M (1998) Genetic variation within and among populations of Arabidopsis thaliana. Genetics 148: 1311-1323
    • (1998) Genetics , vol.148 , pp. 1311-1323
    • Bergelson, J.1    Stahl, E.2    Dudek, S.3    Kreitman, M.4
  • 5
    • 8144222289 scopus 로고    scopus 로고
    • Epistatic interaction between Arabidopsis FRI and FLC flowering time genes generates a latitudinal cline in a life history trait
    • Caicedo AL, Stinchcombe JR, Olsen KM, Schmitt J, Purugganan MD (2004) Epistatic interaction between Arabidopsis FRI and FLC flowering time genes generates a latitudinal cline in a life history trait. Proc Natl Acad Sci USA 101: 15670-15675
    • (2004) Proc Natl Acad Sci USA , vol.101 , pp. 15670-15675
    • Caicedo, A.L.1    Stinchcombe, J.R.2    Olsen, K.M.3    Schmitt, J.4    Purugganan, M.D.5
  • 6
    • 0030918297 scopus 로고    scopus 로고
    • Epistat: A computer program for identifying and testing interactions between pairs of quantitative trait loci
    • Chase K, Adler FR, Lark KG (1997) Epistat: a computer program for identifying and testing interactions between pairs of quantitative trait loci. Theor Appl Genet 94: 724-730
    • (1997) Theor Appl Genet , vol.94 , pp. 724-730
    • Chase, K.1    Adler, F.R.2    Lark, K.G.3
  • 7
    • 1942475192 scopus 로고    scopus 로고
    • Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: Unprecedented sensitivity reveals novel root- and shoot-specific genes
    • Czechowski T, Bari RP, Stitt M, Scheible WR, Udvardi MK (2004) Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes. Plant J 38: 366-379
    • (2004) Plant J , vol.38 , pp. 366-379
    • Czechowski, T.1    Bari, R.P.2    Stitt, M.3    Scheible, W.R.4    Udvardi, M.K.5
  • 9
    • 0034485824 scopus 로고    scopus 로고
    • Cryptochromes are required for phytochrome signaling to the circadian clock but not for rhythmicity
    • Devlin PF, Kay SA (2000) Cryptochromes are required for phytochrome signaling to the circadian clock but not for rhythmicity. Plant Cell 12: 2499-2510
    • (2000) Plant Cell , vol.12 , pp. 2499-2510
    • Devlin, P.F.1    Kay, S.A.2
  • 10
    • 0033593306 scopus 로고    scopus 로고
    • Molecular bases for circadian clocks
    • Dunlap JC (1999) Molecular bases for circadian clocks. Cell 96: 271-290
    • (1999) Cell , vol.96 , pp. 271-290
    • Dunlap, J.C.1
  • 11
    • 0025978277 scopus 로고
    • A simple and rapid method for the preparation of plant genomic DNA for PCR analysis
    • Edwards K, Johnstone C, Thompson C (1991) A simple and rapid method for the preparation of plant genomic DNA for PCR analysis. Nucleic Acids Res 19: 1349
    • (1991) Nucleic Acids Res , vol.19 , pp. 1349
    • Edwards, K.1    Johnstone, C.2    Thompson, C.3
  • 12
    • 20444367685 scopus 로고    scopus 로고
    • Natural allelic variation in the temperature-compensation mechanisms of the Arabidopsis thaliana circadian clock
    • Edwards KD, Lynn JR, Gyula P, Nagy F, Millar AJ (2005) Natural allelic variation in the temperature-compensation mechanisms of the Arabidopsis thaliana circadian clock. Genetics 170: 387-400
    • (2005) Genetics , vol.170 , pp. 387-400
    • Edwards, K.D.1    Lynn, J.R.2    Gyula, P.3    Nagy, F.4    Millar, A.J.5
  • 13
    • 0036899966 scopus 로고    scopus 로고
    • Proseq. A software for preparation and evolutionary analysis of DNA sequence datasets
    • Filatov DA (2002) Proseq. A software for preparation and evolutionary analysis of DNA sequence datasets. Mol Ecol Notes 2: 621-624
    • (2002) Mol Ecol Notes , vol.2 , pp. 621-624
    • Filatov, D.A.1
  • 14
    • 0038459045 scopus 로고    scopus 로고
    • Analysis of the molecular basis of flowering time variation in Arabidopsis accessions
    • Gazzani S, Gendall AR, Lister C, Dean C (2003) Analysis of the molecular basis of flowering time variation in Arabidopsis accessions. Plant Physiol 132: 1107-1114
    • (2003) Plant Physiol , vol.132 , pp. 1107-1114
    • Gazzani, S.1    Gendall, A.R.2    Lister, C.3    Dean, C.4
  • 16
    • 0001180674 scopus 로고    scopus 로고
    • Distinct regulation of CAB and PHYB gene expression by similar circadian clocks
    • Hall A, Kozma-Bognar L, Bastow RM, Nagy F, Millar AJ (2002) Distinct regulation of CAB and PHYB gene expression by similar circadian clocks. Plant J 32: 529-537
    • (2002) Plant J , vol.32 , pp. 529-537
    • Hall, A.1    Kozma-Bognar, L.2    Bastow, R.M.3    Nagy, F.4    Millar, A.J.5
  • 18
    • 77957095245 scopus 로고
    • Nonlinear least squares analysis
    • Johnson ML, Frasier SG (1985) Nonlinear least squares analysis. Methods Enzymol 117: 301-342
    • (1985) Methods Enzymol , vol.117 , pp. 301-342
    • Johnson, M.L.1    Frasier, S.G.2
  • 20
    • 0028186321 scopus 로고
    • The phenotype of some late-flowering mutants is enhanced by a locus on chromosome 5 that is not effective in the Landsberg erecta wild-type
    • Koornneef M, Blankestijn-de Vries H, Hanhart C, Soppe W, Peeters T (1994) The phenotype of some late-flowering mutants is enhanced by a locus on chromosome 5 that is not effective in the Landsberg erecta wild-type. Plant J 6: 911-919
    • (1994) Plant J , vol.6 , pp. 911-919
    • Koornneef, M.1    Blankestijn-De Vries, H.2    Hanhart, C.3    Soppe, W.4    Peeters, T.5
  • 21
    • 0142060793 scopus 로고    scopus 로고
    • The novel MYB protein EARLY-PHYTOCHROME-RESPONSIVE1 is a component of a slave circadian oscillator in Arabidopsis
    • Kuno N, Moller SG, Shinomura T, Xu X, Chua NH, Furuya M (2003) The novel MYB protein EARLY-PHYTOCHROME-RESPONSIVE1 is a component of a slave circadian oscillator in Arabidopsis. Plant Cell 15: 2476-2488
    • (2003) Plant Cell , vol.15 , pp. 2476-2488
    • Kuno, N.1    Moller, S.G.2    Shinomura, T.3    Xu, X.4    Chua, N.H.5    Furuya, M.6
  • 22
    • 0024508964 scopus 로고
    • Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps
    • Lander ES, Botstein D (1989) Mapping Mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 121: 185-199
    • (1989) Genetics , vol.121 , pp. 185-199
    • Lander, E.S.1    Botstein, D.2
  • 23
    • 1842813395 scopus 로고    scopus 로고
    • Circadian and diurnal calcium oscillations encode photoperiodic information in Arabidopsis
    • Love J, Dodd AN, Webb AA (2004) Circadian and diurnal calcium oscillations encode photoperiodic information in Arabidopsis. Plant Cell 16: 956-966
    • (2004) Plant Cell , vol.16 , pp. 956-966
    • Love, J.1    Dodd, A.N.2    Webb, A.A.3
  • 24
    • 0035043956 scopus 로고    scopus 로고
    • Light response of the circadian waves of the APRR1/TOCl quintet: When does the quintet start singing rhythmically in Arabidopsis?
    • Makino S, Matsushika A, Kojima M, Oda Y, Mizuno T (2001) Light response of the circadian waves of the APRR1/TOCl quintet: When does the quintet start singing rhythmically in Arabidopsis? Plant Cell Physiol 42: 334-339
    • (2001) Plant Cell Physiol , vol.42 , pp. 334-339
    • Makino, S.1    Matsushika, A.2    Kojima, M.3    Oda, Y.4    Mizuno, T.5
  • 25
    • 0036008343 scopus 로고    scopus 로고
    • The APRR1/TOC1 quintet implicated in circadian rhythms of Arabidopsis thaliana: I. Characterization with APRR1-overexpressing plants
    • Makino S, Matsushika A, Kojima M, Yamashino T, Mizuno T (2002) The APRR1/TOC1 quintet implicated in circadian rhythms of Arabidopsis thaliana: I. Characterization with APRR1-overexpressing plants. Plant Cell Physiol 43: 58-69
    • (2002) Plant Cell Physiol , vol.43 , pp. 58-69
    • Makino, S.1    Matsushika, A.2    Kojima, M.3    Yamashino, T.4    Mizuno, T.5
  • 27
    • 0033771646 scopus 로고    scopus 로고
    • Circadian waves of expression of the APRR1/TOC1 family of pseudo-response regulators in Arabidopsis thaliana: Insight into the plant circadian clock
    • Matsushika A, Makino S, Kojima M, Mizuno T (2000) Circadian waves of expression of the APRR1/TOC1 family of pseudo-response regulators in Arabidopsis thaliana: insight into the plant circadian clock. Plant Cell Physiol 41: 1002-1012
    • (2000) Plant Cell Physiol , vol.41 , pp. 1002-1012
    • Matsushika, A.1    Makino, S.2    Kojima, M.3    Mizuno, T.4
  • 28
    • 0034619666 scopus 로고    scopus 로고
    • The ELF3 zeitnehmer regulates light signalling to the circadian clock
    • McWatters HG, Bastow RM, Hall A, Millar AJ (2000) The ELF3 zeitnehmer regulates light signalling to the circadian clock. Nature 408: 716-720
    • (2000) Nature , vol.408 , pp. 716-720
    • McWatters, H.G.1    Bastow, R.M.2    Hall, A.3    Millar, A.J.4
  • 30
    • 0028902249 scopus 로고
    • Circadian clock mutants in Arabidopsis identified by luciferase imaging
    • Millar AJ, Carre IA, Strayer CA, Chua NH, Kay SA (1995) Circadian clock mutants in Arabidopsis identified by luciferase imaging. Science 267: 1161-1163
    • (1995) Science , vol.267 , pp. 1161-1163
    • Millar, A.J.1    Carre, I.A.2    Strayer, C.A.3    Chua, N.H.4    Kay, S.A.5
  • 31
    • 0026918135 scopus 로고
    • A novel circadian phenotype based on firefly luciferase expression in transgenic plants
    • Millar AJ, Short SR, Chua NH, Kay SA (1992) A novel circadian phenotype based on firefly luciferase expression in transgenic plants. Plant Cell 4: 1075-1087
    • (1992) Plant Cell , vol.4 , pp. 1075-1087
    • Millar, A.J.1    Short, S.R.2    Chua, N.H.3    Kay, S.A.4
  • 32
    • 2942704101 scopus 로고    scopus 로고
    • Characterization of circadian-associated APRR3 pseudo-response regulator belonging to the APRR1/TOC1 quintet in Arabidopsis thaliana
    • Murakami M, Yamashino T, Mizuno T (2004) Characterization of circadian-associated APRR3 pseudo-response regulator belonging to the APRR1/TOC1 quintet in Arabidopsis thaliana. Plant Cell Physiol 45: 645-650
    • (2004) Plant Cell Physiol , vol.45 , pp. 645-650
    • Murakami, M.1    Yamashino, T.2    Mizuno, T.3
  • 33
    • 0035983345 scopus 로고    scopus 로고
    • The APRR3 component of the clock-associated APRR1/TOC1 quintet is phosphorylated by a novel protein kinase belonging to the WNK family, the gene for which is also transcribed rhythmically in Arabidopsis thaliana
    • Murakami-Kojima M, Nakamichi N, Yamashino T, Mizuno T (2002) The APRR3 component of the clock-associated APRR1/TOC1 quintet is phosphorylated by a novel protein kinase belonging to the WNK family, the gene for which is also transcribed rhythmically in Arabidopsis thaliana. Plant Cell Physiol 43: 675-683
    • (2002) Plant Cell Physiol , vol.43 , pp. 675-683
    • Murakami-Kojima, M.1    Nakamichi, N.2    Yamashino, T.3    Mizuno, T.4
  • 34
    • 0034623005 scopus 로고    scopus 로고
    • T-COFFEE: A novel method for multiple sequence alignments
    • Notredame C, Higgins D, Heringa J (2000) T-COFFEE: a novel method for multiple sequence alignments. J Mol Biol 302: 205-217
    • (2000) J Mol Biol , vol.302 , pp. 205-217
    • Notredame, C.1    Higgins, D.2    Heringa, J.3
  • 35
    • 70449327838 scopus 로고
    • Circadian rhythms and the circadian organisation of living systems
    • Pittendrigh CS (1960) Circadian rhythms and the circadian organisation of living systems. Cold Spring Harb Symp Quant Biol 25: 159-184
    • (1960) Cold Spring Harb Symp Quant Biol , vol.25 , pp. 159-184
    • Pittendrigh, C.S.1
  • 36
    • 0002142754 scopus 로고
    • Circadian systems: Entrainment
    • J Aschoff, ed. Plenum, New York
    • Pittendrigh CS (1981) Circadian systems: entrainment. In J Aschoff, ed, Handbook of Behavioral Neurobiology, Vol 4. Plenum, New York, pp 95-124
    • (1981) Handbook of Behavioral Neurobiology , vol.4 , pp. 95-124
    • Pittendrigh, C.S.1
  • 37
    • 84970103848 scopus 로고
    • Latitudinal clines in the properties of a circadian pacemaker
    • Pittendrigh CS, Takamura T (1989) Latitudinal clines in the properties of a circadian pacemaker. J Biol Rhythms 4: 217-235
    • (1989) J Biol Rhythms , vol.4 , pp. 217-235
    • Pittendrigh, C.S.1    Takamura, T.2
  • 43
    • 0034724518 scopus 로고    scopus 로고
    • ZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis
    • Somers DE, Schultz TF, Milnamow M, Kay SA (2000) ZEITLUPE encodes a novel clock-associated PAS protein from Arabidopsis. Cell 101: 319-329
    • (2000) Cell , vol.101 , pp. 319-329
    • Somers, D.E.1    Schultz, T.F.2    Milnamow, M.3    Kay, S.A.4
  • 49
    • 0032786084 scopus 로고    scopus 로고
    • LOD significance thresholds for QTL analysis in experimental populations of diploid species
    • van Ooijen JW (1999) LOD significance thresholds for QTL analysis in experimental populations of diploid species. Heredity 83: 613-624
    • (1999) Heredity , vol.83 , pp. 613-624
    • Van Ooijen, J.W.1


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