-
1
-
-
33747589932
-
Genome-wide replication profiles of S-phase checkpoint mutants reveal fragile sites in yeast
-
Raveendranathan M., Chattopadhyay S., Bolon Y.T., Haworth J., Clarke D.J., and Bielinsky A.K. Genome-wide replication profiles of S-phase checkpoint mutants reveal fragile sites in yeast. EMBO J. 25 (2006) 3627-3639
-
(2006)
EMBO J.
, vol.25
, pp. 3627-3639
-
-
Raveendranathan, M.1
Chattopadhyay, S.2
Bolon, Y.T.3
Haworth, J.4
Clarke, D.J.5
Bielinsky, A.K.6
-
2
-
-
0035812808
-
Replication dynamics of the yeast genome
-
Raghuraman M.K., Winzeler E.A., Collingwood D., Hunt S., Wodicka L., Conway A., Lockhart D.J., Davis R.W., Brewer B.J., and Fangman W.L. Replication dynamics of the yeast genome. Science 294 (2001) 115-121
-
(2001)
Science
, vol.294
, pp. 115-121
-
-
Raghuraman, M.K.1
Winzeler, E.A.2
Collingwood, D.3
Hunt, S.4
Wodicka, L.5
Conway, A.6
Lockhart, D.J.7
Davis, R.W.8
Brewer, B.J.9
Fangman, W.L.10
-
3
-
-
4544221279
-
Regulation of early events in chromosome replication
-
Diffley J.F. Regulation of early events in chromosome replication. Curr. Biol. 14 (2004) R778-R786
-
(2004)
Curr. Biol.
, vol.14
-
-
Diffley, J.F.1
-
4
-
-
2142687649
-
The dynamics of chromosome replication in yeast
-
Lucas I.A., and Raghuraman M.K. The dynamics of chromosome replication in yeast. Curr. Top. Dev. Biol. 55 (2003) 1-73
-
(2003)
Curr. Top. Dev. Biol.
, vol.55
, pp. 1-73
-
-
Lucas, I.A.1
Raghuraman, M.K.2
-
5
-
-
0036500535
-
The chromosome replication cycle
-
Diffley J.F., and Labib K. The chromosome replication cycle. J. Cell Sci. 115 (2002) 869-872
-
(2002)
J. Cell Sci.
, vol.115
, pp. 869-872
-
-
Diffley, J.F.1
Labib, K.2
-
6
-
-
0032997834
-
The regulation of replication origin activation
-
Donaldson A.D., and Blow J.J. The regulation of replication origin activation. Curr. Opin. Genet. Dev. 9 (1999) 62-68
-
(1999)
Curr. Opin. Genet. Dev.
, vol.9
, pp. 62-68
-
-
Donaldson, A.D.1
Blow, J.J.2
-
7
-
-
0032520181
-
Cdc7 is required throughout the yeast S phase to activate replication origins
-
Donaldson A.D., Fangman W.L., and Brewer B.J. Cdc7 is required throughout the yeast S phase to activate replication origins. Genes Dev. 12 (1998) 491-501
-
(1998)
Genes Dev.
, vol.12
, pp. 491-501
-
-
Donaldson, A.D.1
Fangman, W.L.2
Brewer, B.J.3
-
8
-
-
0038506001
-
Chromosome integrity in Saccharomyces cerevisiae: the interplay of DNA replication initiation factors, elongation factors, and origins
-
Huang D., and Koshland D. Chromosome integrity in Saccharomyces cerevisiae: the interplay of DNA replication initiation factors, elongation factors, and origins. Genes Dev. 17 (2003) 1741-1754
-
(2003)
Genes Dev.
, vol.17
, pp. 1741-1754
-
-
Huang, D.1
Koshland, D.2
-
9
-
-
34249951490
-
Abnormality in initiation program of DNA replication is monitored by the highly repetitive rDNA array on chromosome XII in budding yeast
-
Ide S., Watanabe K., Watanabe H., Shirahige K., Kobayashi T., and Maki H. Abnormality in initiation program of DNA replication is monitored by the highly repetitive rDNA array on chromosome XII in budding yeast. Mol. Cell. Biol. (2006)
-
(2006)
Mol. Cell. Biol.
-
-
Ide, S.1
Watanabe, K.2
Watanabe, H.3
Shirahige, K.4
Kobayashi, T.5
Maki, H.6
-
10
-
-
0031663505
-
The DNA replication fork in eukaryotic cells
-
Waga S., and Stillman B. The DNA replication fork in eukaryotic cells. Annu. Rev. Biochem. 67 (1998) 721-751
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 721-751
-
-
Waga, S.1
Stillman, B.2
-
11
-
-
0032489041
-
Polymerases and the replisome: machines within machines
-
Baker T.A., and Bell S.P. Polymerases and the replisome: machines within machines. Cell 92 (1998) 295-305
-
(1998)
Cell
, vol.92
, pp. 295-305
-
-
Baker, T.A.1
Bell, S.P.2
-
12
-
-
0034141815
-
Eukaryotic DNA replication: a model for a fixed double replisome
-
Falaschi A. Eukaryotic DNA replication: a model for a fixed double replisome. Trends Genet. 16 (2000) 88-92
-
(2000)
Trends Genet.
, vol.16
, pp. 88-92
-
-
Falaschi, A.1
-
13
-
-
33745239698
-
Live-cell imaging reveals replication of individual replicons in eukaryotic replication factories
-
Kitamura E., Blow J.J., and Tanaka T.U. Live-cell imaging reveals replication of individual replicons in eukaryotic replication factories. Cell 125 (2006) 1297-1308
-
(2006)
Cell
, vol.125
, pp. 1297-1308
-
-
Kitamura, E.1
Blow, J.J.2
Tanaka, T.U.3
-
14
-
-
33745251622
-
In and out of the replication factory
-
Meister P., Taddei A., and Gasser S.M. In and out of the replication factory. Cell 125 (2006) 1233-1235
-
(2006)
Cell
, vol.125
, pp. 1233-1235
-
-
Meister, P.1
Taddei, A.2
Gasser, S.M.3
-
15
-
-
0042865938
-
S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex
-
Katou Y., Kanoh Y., Bando M., Noguchi H., Tanaka H., Ashikari T., Sugimoto K., and Shirahige K. S-phase checkpoint proteins Tof1 and Mrc1 form a stable replication-pausing complex. Nature 424 (2003) 1078-1083
-
(2003)
Nature
, vol.424
, pp. 1078-1083
-
-
Katou, Y.1
Kanoh, Y.2
Bando, M.3
Noguchi, H.4
Tanaka, H.5
Ashikari, T.6
Sugimoto, K.7
Shirahige, K.8
-
16
-
-
14744299899
-
Uncoupling of unwinding from DNA synthesis implies regulation of MCM helicase by Tof 1/Mrc1/Csm3 checkpoint complex
-
Nedelcheva M.N., Roguev A., Dolapchiev L.B., Shevchenko A., Taskov H.B., Stewart A.F., and Stoynov S.S. Uncoupling of unwinding from DNA synthesis implies regulation of MCM helicase by Tof 1/Mrc1/Csm3 checkpoint complex. J. Mol. Biol. 347 (2005) 509-521
-
(2005)
J. Mol. Biol.
, vol.347
, pp. 509-521
-
-
Nedelcheva, M.N.1
Roguev, A.2
Dolapchiev, L.B.3
Shevchenko, A.4
Taskov, H.B.5
Stewart, A.F.6
Stoynov, S.S.7
-
17
-
-
0035735472
-
Mrc1 transduces signals of DNA replication stress to activate Rad53
-
Alcasabas A.A., Osborn A.J., Bachant J., Hu F., Werler P.J., Bousset K., Furuya K., Diffley J.F., Carr A.M., and Elledge S.J. Mrc1 transduces signals of DNA replication stress to activate Rad53. Nat. Cell Biol. 3 (2001) 958-965
-
(2001)
Nat. Cell Biol.
, vol.3
, pp. 958-965
-
-
Alcasabas, A.A.1
Osborn, A.J.2
Bachant, J.3
Hu, F.4
Werler, P.J.5
Bousset, K.6
Furuya, K.7
Diffley, J.F.8
Carr, A.M.9
Elledge, S.J.10
-
18
-
-
29544437558
-
Multiple mechanisms control chromosome integrity after replication fork uncoupling and restart at irreparable UV lesions
-
Lopes M., Foiani M., and Sogo J.M. Multiple mechanisms control chromosome integrity after replication fork uncoupling and restart at irreparable UV lesions. Mol. Cell 21 (2006) 15-27
-
(2006)
Mol. Cell
, vol.21
, pp. 15-27
-
-
Lopes, M.1
Foiani, M.2
Sogo, J.M.3
-
19
-
-
27544445683
-
The DNA damage response during DNA replication
-
Branzei D., and Foiani M. The DNA damage response during DNA replication. Curr. Opin. Cell Biol. 17 (2005) 568-575
-
(2005)
Curr. Opin. Cell Biol.
, vol.17
, pp. 568-575
-
-
Branzei, D.1
Foiani, M.2
-
20
-
-
33746816108
-
The Rad53 signal transduction pathway: Replication fork stabilization, DNA repair, and adaptation
-
Branzei D., and Foiani M. The Rad53 signal transduction pathway: Replication fork stabilization, DNA repair, and adaptation. Exp. Cell Res. 312 (2006) 2654-2659
-
(2006)
Exp. Cell Res.
, vol.312
, pp. 2654-2659
-
-
Branzei, D.1
Foiani, M.2
-
21
-
-
24944575222
-
Signal transduction: how Rad53 kinase is activated
-
Pellicioli A., and Foiani M. Signal transduction: how Rad53 kinase is activated. Curr. Biol. 15 (2005) R769-R771
-
(2005)
Curr. Biol.
, vol.15
-
-
Pellicioli, A.1
Foiani, M.2
-
22
-
-
0032530824
-
Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway
-
Desany B.A., Alcasabas A.A., Bachant J.B., and Elledge S.J. Recovery from DNA replicational stress is the essential function of the S-phase checkpoint pathway. Genes Dev. 12 (1998) 2956-2970
-
(1998)
Genes Dev.
, vol.12
, pp. 2956-2970
-
-
Desany, B.A.1
Alcasabas, A.A.2
Bachant, J.B.3
Elledge, S.J.4
-
23
-
-
0038730929
-
A central role for DNA replication forks in checkpoint activation and response
-
Tercero J.A., Longhese M.P., and Diffley J.F. A central role for DNA replication forks in checkpoint activation and response. Mol. Cell 11 (2003) 1323-1336
-
(2003)
Mol. Cell
, vol.11
, pp. 1323-1336
-
-
Tercero, J.A.1
Longhese, M.P.2
Diffley, J.F.3
-
24
-
-
0037178740
-
Fork reversal and ssDNA accumulation at stalled replication forks owing to checkpoint defects
-
Sogo J.M., Lopes M., and Foiani M. Fork reversal and ssDNA accumulation at stalled replication forks owing to checkpoint defects. Science 297 (2002) 599-602
-
(2002)
Science
, vol.297
, pp. 599-602
-
-
Sogo, J.M.1
Lopes, M.2
Foiani, M.3
-
25
-
-
0035797383
-
The DNA replication checkpoint response stabilizes stalled replication forks
-
Lopes M., Cotta-Ramusino C., Pellicioli A., Liberi G., Plevani P., Muzi-Falconi M., Newlon C.S., and Foiani M. The DNA replication checkpoint response stabilizes stalled replication forks. Nature 412 (2001) 557-561
-
(2001)
Nature
, vol.412
, pp. 557-561
-
-
Lopes, M.1
Cotta-Ramusino, C.2
Pellicioli, A.3
Liberi, G.4
Plevani, P.5
Muzi-Falconi, M.6
Newlon, C.S.7
Foiani, M.8
-
26
-
-
0035797444
-
Regulation of DNA replication fork progression through damaged DNA by the Mec1/Rad53 checkpoint
-
Tercero J.A., and Diffley J.F. Regulation of DNA replication fork progression through damaged DNA by the Mec1/Rad53 checkpoint. Nature 412 (2001) 553-557
-
(2001)
Nature
, vol.412
, pp. 553-557
-
-
Tercero, J.A.1
Diffley, J.F.2
-
27
-
-
0042466524
-
DNA polymerase stabilization at stalled replication forks requires Mec1 and the RecQ helicase Sgs1
-
Cobb J.A., Bjergbaek L., Shimada K., Frei C., and Gasser S.M. DNA polymerase stabilization at stalled replication forks requires Mec1 and the RecQ helicase Sgs1. EMBO J. 22 (2003) 4325-4336
-
(2003)
EMBO J.
, vol.22
, pp. 4325-4336
-
-
Cobb, J.A.1
Bjergbaek, L.2
Shimada, K.3
Frei, C.4
Gasser, S.M.5
-
28
-
-
1442351990
-
Checkpoint-mediated control of replisome-fork association and signalling in response to replication pausing
-
Lucca C., Vanoli F., Cotta-Ramusino C., Pellicioli A., Liberi G., Haber J., and Foiani M. Checkpoint-mediated control of replisome-fork association and signalling in response to replication pausing. Oncogene 23 (2004) 1206-1213
-
(2004)
Oncogene
, vol.23
, pp. 1206-1213
-
-
Lucca, C.1
Vanoli, F.2
Cotta-Ramusino, C.3
Pellicioli, A.4
Liberi, G.5
Haber, J.6
Foiani, M.7
-
29
-
-
33645152790
-
Genomic mapping of single-stranded DNA in hydroxyurea-challenged yeasts identifies origins of replication
-
Feng W., Collingwood D., Boeck M.E., Fox L.A., Alvino G.M., Fangman W.L., Raghuraman M.K., and Brewer B.J. Genomic mapping of single-stranded DNA in hydroxyurea-challenged yeasts identifies origins of replication. Nat. Cell Biol. 8 (2006) 148-155
-
(2006)
Nat. Cell Biol.
, vol.8
, pp. 148-155
-
-
Feng, W.1
Collingwood, D.2
Boeck, M.E.3
Fox, L.A.4
Alvino, G.M.5
Fangman, W.L.6
Raghuraman, M.K.7
Brewer, B.J.8
-
30
-
-
11344268431
-
Exo1 processes stalled replication forks and counteracts fork reversal in checkpoint-defective cells
-
Cotta-Ramusino C., Fachinetti D., Lucca C., Doksani Y., Lopes M., Sogo J., and Foiani M. Exo1 processes stalled replication forks and counteracts fork reversal in checkpoint-defective cells. Mol. Cell 17 (2005) 153-159
-
(2005)
Mol. Cell
, vol.17
, pp. 153-159
-
-
Cotta-Ramusino, C.1
Fachinetti, D.2
Lucca, C.3
Doksani, Y.4
Lopes, M.5
Sogo, J.6
Foiani, M.7
-
31
-
-
14844286404
-
Chromosomal translocations in yeast induced by low levels of DNA polymerase a model for chromosome fragile sites
-
Lemoine F.J., Degtyareva N.P., Lobachev K., and Petes T.D. Chromosomal translocations in yeast induced by low levels of DNA polymerase a model for chromosome fragile sites. Cell 120 (2005) 587-598
-
(2005)
Cell
, vol.120
, pp. 587-598
-
-
Lemoine, F.J.1
Degtyareva, N.P.2
Lobachev, K.3
Petes, T.D.4
-
32
-
-
30944462801
-
Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast
-
Admire A., Shanks L., Danzl N., Wang M., Weier U., Stevens W., Hunt E., and Weinert T. Cycles of chromosome instability are associated with a fragile site and are increased by defects in DNA replication and checkpoint controls in yeast. Genes Dev. 20 (2006) 159-173
-
(2006)
Genes Dev.
, vol.20
, pp. 159-173
-
-
Admire, A.1
Shanks, L.2
Danzl, N.3
Wang, M.4
Weier, U.5
Stevens, W.6
Hunt, E.7
Weinert, T.8
-
33
-
-
0035830498
-
Suppression of spontaneous chromosomal rearrangements by S phase checkpoint functions in Saccharomyces cerevisiae
-
Myung K., Datta A., and Kolodner R.D. Suppression of spontaneous chromosomal rearrangements by S phase checkpoint functions in Saccharomyces cerevisiae. Cell 104 (2001) 397-408
-
(2001)
Cell
, vol.104
, pp. 397-408
-
-
Myung, K.1
Datta, A.2
Kolodner, R.D.3
-
34
-
-
0037178723
-
ATR homolog Mec1 promotes fork progression, thus averting breaks in replication slow zones
-
Cha R.S., and Kleckner N. ATR homolog Mec1 promotes fork progression, thus averting breaks in replication slow zones. Science 297 (2002) 602-606
-
(2002)
Science
, vol.297
, pp. 602-606
-
-
Cha, R.S.1
Kleckner, N.2
-
36
-
-
30144439370
-
Common fragile sites
-
Glover T.W. Common fragile sites. Cancer Lett. 232 (2006) 4-12
-
(2006)
Cancer Lett.
, vol.232
, pp. 4-12
-
-
Glover, T.W.1
-
37
-
-
0032497529
-
A Mec1- and Rad53-dependent checkpoint controls late-firing origins of DNA replication
-
Santocanale C., and Diffley J.F. A Mec1- and Rad53-dependent checkpoint controls late-firing origins of DNA replication. Nature 395 (1998) 615-618
-
(1998)
Nature
, vol.395
, pp. 615-618
-
-
Santocanale, C.1
Diffley, J.F.2
-
38
-
-
0032497548
-
Regulation of DNA-replication origins during cell-cycle progression
-
Shirahige K., Hori Y., Shiraishi K., Yamashita M., Takahashi K., Obuse C., Tsurimoto T., and Yoshikawa H. Regulation of DNA-replication origins during cell-cycle progression. Nature 395 (1998) 618-621
-
(1998)
Nature
, vol.395
, pp. 618-621
-
-
Shirahige, K.1
Hori, Y.2
Shiraishi, K.3
Yamashita, M.4
Takahashi, K.5
Obuse, C.6
Tsurimoto, T.7
Yoshikawa, H.8
-
39
-
-
33748916237
-
Novel role for checkpoint Rad53 protein kinase in the initiation of chromosomal DNA replication in Saccharomyces cerevisiae
-
Dohrmann P.R., and Sclafani R.A. Novel role for checkpoint Rad53 protein kinase in the initiation of chromosomal DNA replication in Saccharomyces cerevisiae. Genetics 174 (2006) 87-99
-
(2006)
Genetics
, vol.174
, pp. 87-99
-
-
Dohrmann, P.R.1
Sclafani, R.A.2
-
40
-
-
0344688414
-
A Rad53 kinase-dependent surveillance mechanism that regulates histone protein levels in S. cerevisiae
-
Gunjan A., and Verreault A. A Rad53 kinase-dependent surveillance mechanism that regulates histone protein levels in S. cerevisiae. Cell 115 (2003) 537-549
-
(2003)
Cell
, vol.115
, pp. 537-549
-
-
Gunjan, A.1
Verreault, A.2
-
41
-
-
0037224965
-
Checkpoint activation regulates mutagenic translesion synthesis
-
Kai M., and Wang T.S. Checkpoint activation regulates mutagenic translesion synthesis. Genes Dev. 17 (2003) 64-76
-
(2003)
Genes Dev.
, vol.17
, pp. 64-76
-
-
Kai, M.1
Wang, T.S.2
-
42
-
-
0031716616
-
The Saccharomyces cerevisiae RAD9, RAD17, RAD24 and MEC3 genes are required for tolerating irreparable, ultraviolet-induced DNA damage
-
Paulovich A.G., Armour C.D., and Hartwell L.H. The Saccharomyces cerevisiae RAD9, RAD17, RAD24 and MEC3 genes are required for tolerating irreparable, ultraviolet-induced DNA damage. Genetics 150 (1998) 75-93
-
(1998)
Genetics
, vol.150
, pp. 75-93
-
-
Paulovich, A.G.1
Armour, C.D.2
Hartwell, L.H.3
-
43
-
-
7244220162
-
DNA end resection, homologous recombination and DNA damage checkpoint activation require CDK1
-
Ira G., Pellicioli A., Balijja A., Wang X., Fiorani S., Carotenuto W., Liberi G., Bressan D., Wan L., Hollingsworth N.M., Haber J.E., and Foiani M. DNA end resection, homologous recombination and DNA damage checkpoint activation require CDK1. Nature 431 (2004) 1011-1017
-
(2004)
Nature
, vol.431
, pp. 1011-1017
-
-
Ira, G.1
Pellicioli, A.2
Balijja, A.3
Wang, X.4
Fiorani, S.5
Carotenuto, W.6
Liberi, G.7
Bressan, D.8
Wan, L.9
Hollingsworth, N.M.10
Haber, J.E.11
Foiani, M.12
-
44
-
-
33746234714
-
Dpb11, the budding yeast homolog of TopBP1, functions with the checkpoint clamp in recombination repair
-
Ogiwara H., Ui A., Onoda F., Tada S., Enomoto T., and Seki M. Dpb11, the budding yeast homolog of TopBP1, functions with the checkpoint clamp in recombination repair. Nucleic Acids Res. 34 (2006) 3389-3398
-
(2006)
Nucleic Acids Res.
, vol.34
, pp. 3389-3398
-
-
Ogiwara, H.1
Ui, A.2
Onoda, F.3
Tada, S.4
Enomoto, T.5
Seki, M.6
-
45
-
-
0038799991
-
Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae
-
Paques F., and Haber J.E. Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae. Microbiol. Mol. Biol. Rev. 63 (1999) 349-404
-
(1999)
Microbiol. Mol. Biol. Rev.
, vol.63
, pp. 349-404
-
-
Paques, F.1
Haber, J.E.2
-
46
-
-
28444470501
-
Human DNA polymerase eta promotes DNA synthesis from strand invasion intermediates of homologous recombination
-
McIlwraith M.J., Vaisman A., Liu Y., Fanning E., Woodgate R., and West S.C. Human DNA polymerase eta promotes DNA synthesis from strand invasion intermediates of homologous recombination. Mol. Cell 20 (2005) 783-792
-
(2005)
Mol. Cell
, vol.20
, pp. 783-792
-
-
McIlwraith, M.J.1
Vaisman, A.2
Liu, Y.3
Fanning, E.4
Woodgate, R.5
West, S.C.6
-
47
-
-
28444462167
-
Dual roles for DNA polymerase eta in homologous DNA recombination and translesion DNA synthesis
-
Kawamoto T., Araki K., Sonoda E., Yamashita Y.M., Harada K., Kikuchi K., Masutani C., Hanaoka F., Nozaki K., Hashimoto N., and Takeda S. Dual roles for DNA polymerase eta in homologous DNA recombination and translesion DNA synthesis. Mol. Cell 20 (2005) 793-799
-
(2005)
Mol. Cell
, vol.20
, pp. 793-799
-
-
Kawamoto, T.1
Araki, K.2
Sonoda, E.3
Yamashita, Y.M.4
Harada, K.5
Kikuchi, K.6
Masutani, C.7
Hanaoka, F.8
Nozaki, K.9
Hashimoto, N.10
Takeda, S.11
-
48
-
-
33645008019
-
ATR homolog Mec1 controls association of DNA polymerase zeta-Rev1 complex with regions near a double-strand break
-
Hirano Y., and Sugimoto K. ATR homolog Mec1 controls association of DNA polymerase zeta-Rev1 complex with regions near a double-strand break. Curr. Biol. 16 (2006) 586-590
-
(2006)
Curr. Biol.
, vol.16
, pp. 586-590
-
-
Hirano, Y.1
Sugimoto, K.2
-
49
-
-
33644616440
-
The 9-1-1 checkpoint clamp physically interacts with polzeta and is partially required for spontaneous polzeta-dependent mutagenesis in Saccharomyces cerevisiae
-
Sabbioneda S., Minesinger B.K., Giannattasio M., Plevani P., Muzi-Falconi M., and Jinks-Robertson S. The 9-1-1 checkpoint clamp physically interacts with polzeta and is partially required for spontaneous polzeta-dependent mutagenesis in Saccharomyces cerevisiae. J. Biol. Chem. 280 (2005) 38657-38665
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 38657-38665
-
-
Sabbioneda, S.1
Minesinger, B.K.2
Giannattasio, M.3
Plevani, P.4
Muzi-Falconi, M.5
Jinks-Robertson, S.6
-
50
-
-
4544281398
-
Choreography of the DNA damage response: spatiotemporal relationships among checkpoint and repair proteins
-
Lisby M., Barlow J.H., Burgess R.C., and Rothstein R. Choreography of the DNA damage response: spatiotemporal relationships among checkpoint and repair proteins. Cell 118 (2004) 699-713
-
(2004)
Cell
, vol.118
, pp. 699-713
-
-
Lisby, M.1
Barlow, J.H.2
Burgess, R.C.3
Rothstein, R.4
-
51
-
-
0034119315
-
DNA repair protein Rad55 is a terminal substrate of the DNA damage checkpoints
-
Bashkirov V.I., King J.S., Bashkirova E.V., Schmuckli-Maurer J., and Heyer W.D. DNA repair protein Rad55 is a terminal substrate of the DNA damage checkpoints. Mol. Cell. Biol. 20 (2000) 4393-4404
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 4393-4404
-
-
Bashkirov, V.I.1
King, J.S.2
Bashkirova, E.V.3
Schmuckli-Maurer, J.4
Heyer, W.D.5
-
52
-
-
0034462093
-
Damage tolerance protein Mus81 associates with the FHA1 domain of checkpoint kinase Cds1
-
Boddy M.N., Lopez-Girona A., Shanahan P., Interthal H., Heyer W.-D., and Russell P. Damage tolerance protein Mus81 associates with the FHA1 domain of checkpoint kinase Cds1. Mol. Cell. Biol. 20 (2000) 8758-8766
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 8758-8766
-
-
Boddy, M.N.1
Lopez-Girona, A.2
Shanahan, P.3
Interthal, H.4
Heyer, W.-D.5
Russell, P.6
-
53
-
-
0034307720
-
Phosphorylation of the replication protein A large subunit in the Saccharomyces cerevisiae checkpoint response
-
Brush G.S., and Kelly T.J. Phosphorylation of the replication protein A large subunit in the Saccharomyces cerevisiae checkpoint response. Nucleic Acids Res. 28 (2000) 3725-3732
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 3725-3732
-
-
Brush, G.S.1
Kelly, T.J.2
-
54
-
-
0035449349
-
The yeast Xrs2 complex functions in S phase checkpoint regulation
-
D'Amours D., and Jackson S.P. The yeast Xrs2 complex functions in S phase checkpoint regulation. Genes Dev. 15 (2001) 2238-2249
-
(2001)
Genes Dev.
, vol.15
, pp. 2238-2249
-
-
D'Amours, D.1
Jackson, S.P.2
-
55
-
-
0034665462
-
Srs2 DNA helicase is involved in checkpoint response and its regulation requires a functional Mec1-dependent pathway and Cdk1 activity
-
Liberi G., Chiolo I., Pellicioli A., Lopes M., Plevani P., Muzi-Falconi M., and Foiani M. Srs2 DNA helicase is involved in checkpoint response and its regulation requires a functional Mec1-dependent pathway and Cdk1 activity. EMBO J. 19 (2000) 5027-5038
-
(2000)
EMBO J.
, vol.19
, pp. 5027-5038
-
-
Liberi, G.1
Chiolo, I.2
Pellicioli, A.3
Lopes, M.4
Plevani, P.5
Muzi-Falconi, M.6
Foiani, M.7
-
56
-
-
0034964498
-
A DNA damage response pathway controlled by Tel1 and the Mre11 complex
-
Usui T., Ogawa H., and Petrini J.H.J. A DNA damage response pathway controlled by Tel1 and the Mre11 complex. Mol. Cell 7 (2001) 1255-1266
-
(2001)
Mol. Cell
, vol.7
, pp. 1255-1266
-
-
Usui, T.1
Ogawa, H.2
Petrini, J.H.J.3
-
57
-
-
0032512750
-
Regulation of Rad51 function by c-Abl in response to DNA damage
-
Yuan Z.M., Huang Y., Ishiko T., Nakada S., Utsugisawa T., Kharbanda S., Wang R., Sung P., Shinohara A., Weichselbaum R., and Kufe D. Regulation of Rad51 function by c-Abl in response to DNA damage. J. Biol. Chem. 273 (1998) 3799-3802
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 3799-3802
-
-
Yuan, Z.M.1
Huang, Y.2
Ishiko, T.3
Nakada, S.4
Utsugisawa, T.5
Kharbanda, S.6
Wang, R.7
Sung, P.8
Shinohara, A.9
Weichselbaum, R.10
Kufe, D.11
-
58
-
-
27444444448
-
Slx4 becomes phosphorylated after DNA damage in a Mec1 /Tel1-dependent manner and is required for repair of DNA alkylation damage
-
Flott S., and Rouse J. Slx4 becomes phosphorylated after DNA damage in a Mec1 /Tel1-dependent manner and is required for repair of DNA alkylation damage. Biochem. J. 391 (2005) 325-333
-
(2005)
Biochem. J.
, vol.391
, pp. 325-333
-
-
Flott, S.1
Rouse, J.2
-
59
-
-
30044442659
-
Slx4 regulates DNA damage checkpoint-dependent phosphorylation of the BRCT domain protein Rtt107/Esc4
-
Roberts T.M., Kobor M.S., Bastin-Shanower S.A., Ii M., Horte S.A., Gin J.W., Emili A., Rine J., Brill S.J., and Brown G.W. Slx4 regulates DNA damage checkpoint-dependent phosphorylation of the BRCT domain protein Rtt107/Esc4. Mol. Biol. Cell 17 (2006) 539-548
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 539-548
-
-
Roberts, T.M.1
Kobor, M.S.2
Bastin-Shanower, S.A.3
Ii, M.4
Horte, S.A.5
Gin, J.W.6
Emili, A.7
Rine, J.8
Brill, S.J.9
Brown, G.W.10
-
60
-
-
17444416489
-
Replication checkpoint kinase Cds1 regulates Mus81 to preserve genome integrity during replication stress
-
Kai M., Boddy M.N., Russell P., and Wang T.S. Replication checkpoint kinase Cds1 regulates Mus81 to preserve genome integrity during replication stress. Genes Dev. 19 (2005) 919-932
-
(2005)
Genes Dev.
, vol.19
, pp. 919-932
-
-
Kai, M.1
Boddy, M.N.2
Russell, P.3
Wang, T.S.4
-
61
-
-
0042131895
-
Replication checkpoint kinase Cds1 regulates recombinational repair protein Rad60
-
Boddy M.N., Shanahan P., McDonald W.H., Lopez-Girona A., Noguchi E., Yates I.J., and Russell P. Replication checkpoint kinase Cds1 regulates recombinational repair protein Rad60. Mol. Cell. Biol. 23 (2003) 5939-5946
-
(2003)
Mol. Cell. Biol.
, vol.23
, pp. 5939-5946
-
-
Boddy, M.N.1
Shanahan, P.2
McDonald, W.H.3
Lopez-Girona, A.4
Noguchi, E.5
Yates, I.J.6
Russell, P.7
-
62
-
-
0037673941
-
DNA helicase Srs2 disrupts the Rad51 presynaptic filament
-
Krejci L., Van Komen S., Li Y., Villemain J., Reddy M.S., Klein H., Ellenberger T., and Sung P. DNA helicase Srs2 disrupts the Rad51 presynaptic filament. Nature 423 (2003) 305-309
-
(2003)
Nature
, vol.423
, pp. 305-309
-
-
Krejci, L.1
Van Komen, S.2
Li, Y.3
Villemain, J.4
Reddy, M.S.5
Klein, H.6
Ellenberger, T.7
Sung, P.8
-
63
-
-
0037673943
-
The Srs2 helicase prevents recombination by disrupting Rad51 nucleoprotein filaments
-
Veaute X., Jeusset J., Soustelle C., Kowalczykowski S.C., Le Cam E., and Fabre F. The Srs2 helicase prevents recombination by disrupting Rad51 nucleoprotein filaments. Nature 423 (2003) 309-312
-
(2003)
Nature
, vol.423
, pp. 309-312
-
-
Veaute, X.1
Jeusset, J.2
Soustelle, C.3
Kowalczykowski, S.C.4
Le Cam, E.5
Fabre, F.6
-
64
-
-
21244449061
-
Crosstalk between SUMO and Ubiquitin on PCNA Is Mediated by Recruitment of the Helicase Srs2p
-
Papouli E., Chen S., Davies A.A., Huttner D., Krejci L., Sung P., and Ulrich H.D. Crosstalk between SUMO and Ubiquitin on PCNA Is Mediated by Recruitment of the Helicase Srs2p. Mol. Cell 19 (2005) 123-133
-
(2005)
Mol. Cell
, vol.19
, pp. 123-133
-
-
Papouli, E.1
Chen, S.2
Davies, A.A.3
Huttner, D.4
Krejci, L.5
Sung, P.6
Ulrich, H.D.7
-
66
-
-
0028314007
-
Specific complex formation between yeast RAD6 and RAD 18 proteins: a potential mechanism for targeting RAD6 ubiquitin-conjugating activity to DNA damage sites
-
Bailly V., Lamb J., Sung P., Prakash S., and Prakash L. Specific complex formation between yeast RAD6 and RAD 18 proteins: a potential mechanism for targeting RAD6 ubiquitin-conjugating activity to DNA damage sites. Genes Dev. 8 (1994) 811-820
-
(1994)
Genes Dev.
, vol.8
, pp. 811-820
-
-
Bailly, V.1
Lamb, J.2
Sung, P.3
Prakash, S.4
Prakash, L.5
-
67
-
-
0033525582
-
Noncanonical MMS2-encoded ubiquitin-conjugating enzyme functions in assembly of novel polyubiquitin chains for DNA repair
-
Hofmann R.M., and Pickart C.M. Noncanonical MMS2-encoded ubiquitin-conjugating enzyme functions in assembly of novel polyubiquitin chains for DNA repair. Cell 96 (1999) 645-653
-
(1999)
Cell
, vol.96
, pp. 645-653
-
-
Hofmann, R.M.1
Pickart, C.M.2
-
68
-
-
0034600851
-
Two RING finger proteins mediate cooperation between ubiquitin-conjugating enzymes in DNA repair
-
Ulrich H.D., and Jentsch S. Two RING finger proteins mediate cooperation between ubiquitin-conjugating enzymes in DNA repair. EMBO J. 19 (2000) 3388-3397
-
(2000)
EMBO J.
, vol.19
, pp. 3388-3397
-
-
Ulrich, H.D.1
Jentsch, S.2
-
69
-
-
0028847989
-
A ubiquitin mutant with specific defects in DNA repair and multiubiquitination
-
Spence J., Sadis S., Haas A.L., and Finley D. A ubiquitin mutant with specific defects in DNA repair and multiubiquitination. Mol. Cell. Biol. 15 (1995) 1265-1273
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 1265-1273
-
-
Spence, J.1
Sadis, S.2
Haas, A.L.3
Finley, D.4
-
70
-
-
0037068455
-
RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO
-
Hoege C., Pfander B., Moldovan G.L., Pyrowolakis G., and Jentsch S. RAD6-dependent DNA repair is linked to modification of PCNA by ubiquitin and SUMO. Nature 419 (2002) 135-141
-
(2002)
Nature
, vol.419
, pp. 135-141
-
-
Hoege, C.1
Pfander, B.2
Moldovan, G.L.3
Pyrowolakis, G.4
Jentsch, S.5
-
71
-
-
0141831006
-
Control of spontaneous and damage-induced mutagenesis by SUMO and ubiquitin conjugation
-
Stelter P., and Ulrich H.D. Control of spontaneous and damage-induced mutagenesis by SUMO and ubiquitin conjugation. Nature 425 (2003) 188-191
-
(2003)
Nature
, vol.425
, pp. 188-191
-
-
Stelter, P.1
Ulrich, H.D.2
-
72
-
-
7944233608
-
Rad18/Rad5/Mms2-mediated polyubiquitination of PCNA is implicated in replication completion during replication stress
-
Branzei D., Seki M., and Enomoto T. Rad18/Rad5/Mms2-mediated polyubiquitination of PCNA is implicated in replication completion during replication stress. Genes Cells 9 (2004) 1031-1042
-
(2004)
Genes Cells
, vol.9
, pp. 1031-1042
-
-
Branzei, D.1
Seki, M.2
Enomoto, T.3
-
73
-
-
0033899540
-
The Saccharomyces cerevisiae RAD6 group is composed of an error-prone and two error-free postreplication repair pathways
-
Xiao W., Chow B.L., Broomfield S., and Hanna M. The Saccharomyces cerevisiae RAD6 group is composed of an error-prone and two error-free postreplication repair pathways. Genetics 155 (2000) 1633-1641
-
(2000)
Genetics
, vol.155
, pp. 1633-1641
-
-
Xiao, W.1
Chow, B.L.2
Broomfield, S.3
Hanna, M.4
-
74
-
-
33749617398
-
Mms2-Ubc13-dependent and -independent roles of Rad5 ubiquitin ligase in postreplication repair and translesion DNA synthesis in Saccharomyces cerevisiae
-
Gangavarapu V., Haracska L., Unk I., Johnson R.E., Prakash S., and Prakash L. Mms2-Ubc13-dependent and -independent roles of Rad5 ubiquitin ligase in postreplication repair and translesion DNA synthesis in Saccharomyces cerevisiae. Mol. Cell. Biol. 26 (2006) 7783-7790
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 7783-7790
-
-
Gangavarapu, V.1
Haracska, L.2
Unk, I.3
Johnson, R.E.4
Prakash, S.5
Prakash, L.6
-
75
-
-
4644307282
-
CDC7/DBF4 functions in the translesion synthesis branch of the RAD6 epistasis group in Saccharomyces cerevisiae
-
Pessoa-Brandao L., and Sclafani R.A. CDC7/DBF4 functions in the translesion synthesis branch of the RAD6 epistasis group in Saccharomyces cerevisiae. Genetics 167 (2004) 1597-1610
-
(2004)
Genetics
, vol.167
, pp. 1597-1610
-
-
Pessoa-Brandao, L.1
Sclafani, R.A.2
-
76
-
-
0019770524
-
Characterization of postreplication repair in Saccharomyces cerevisiae and effects of rad6, rad18, rev3 and rad52 mutations
-
Prakash L. Characterization of postreplication repair in Saccharomyces cerevisiae and effects of rad6, rad18, rev3 and rad52 mutations. Mol. Gen. Genet. 184 (1981) 471-478
-
(1981)
Mol. Gen. Genet.
, vol.184
, pp. 471-478
-
-
Prakash, L.1
-
77
-
-
0036118423
-
Requirement of RAD5 and MMS2 for postreplication repair of UV-damaged DNA in Saccharomyces cerevisiae
-
Torres-Ramos C.A., Prakash S., and Prakash L. Requirement of RAD5 and MMS2 for postreplication repair of UV-damaged DNA in Saccharomyces cerevisiae. Mol. Cell. Biol. 22 (2002) 2419-2426
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 2419-2426
-
-
Torres-Ramos, C.A.1
Prakash, S.2
Prakash, L.3
-
78
-
-
27644590452
-
The error-free component of the RAD6/RAD18 DNA damage tolerance pathway of budding yeast employs sister-strand recombination
-
Zhang H., and Lawrence C.W. The error-free component of the RAD6/RAD18 DNA damage tolerance pathway of budding yeast employs sister-strand recombination. Proc. Natl. Acad. Sci. U.S.A. 102 (2005) 15954-15959
-
(2005)
Proc. Natl. Acad. Sci. U.S.A.
, vol.102
, pp. 15954-15959
-
-
Zhang, H.1
Lawrence, C.W.2
-
79
-
-
32044451333
-
Regulation of gross chromosomal rearrangements by ubiquitin and SUMO ligases in Saccharomyces cerevisiae
-
Motegi A., Kuntz K., Majeed A., Smith S., and Myung K. Regulation of gross chromosomal rearrangements by ubiquitin and SUMO ligases in Saccharomyces cerevisiae. Mol. Cell. Biol. 26 (2006) 1424-1433
-
(2006)
Mol. Cell. Biol.
, vol.26
, pp. 1424-1433
-
-
Motegi, A.1
Kuntz, K.2
Majeed, A.3
Smith, S.4
Myung, K.5
-
80
-
-
0026089250
-
The hyper-gene conversion hpr5-1 mutation of Saccharomyces cerevisiae is an allele of the SRS2/RADH gene
-
Rong L., Palladino F., Aguilera A., and Klein H.L. The hyper-gene conversion hpr5-1 mutation of Saccharomyces cerevisiae is an allele of the SRS2/RADH gene. Genetics 127 (1991) 75-85
-
(1991)
Genetics
, vol.127
, pp. 75-85
-
-
Rong, L.1
Palladino, F.2
Aguilera, A.3
Klein, H.L.4
-
81
-
-
0026751086
-
Semidominant suppressors of Srs2 helicase mutations of Saccharomyces cerevisiae map in the RAD51 gene, whose sequence predicts a protein with similarities to procaryotic RecA proteins
-
Aboussekhra A., Chanet R., Adjiri A., and Fabre F. Semidominant suppressors of Srs2 helicase mutations of Saccharomyces cerevisiae map in the RAD51 gene, whose sequence predicts a protein with similarities to procaryotic RecA proteins. Mol. Cell. Biol. 12 (1992) 3224-3234
-
(1992)
Mol. Cell. Biol.
, vol.12
, pp. 3224-3234
-
-
Aboussekhra, A.1
Chanet, R.2
Adjiri, A.3
Fabre, F.4
-
82
-
-
19944432787
-
Rad51-dependent DNA structures accumulate at damaged replication forks in sgs1 mutants defective in the yeast ortholog of BLM RecQ helicase
-
Liberi G., Maffioletti G., Lucca C., Chiolo I., Baryshnikova A., Cotta-Ramusino C., Lopes M., Pellicioli A., Haber J.E., and Foiani M. Rad51-dependent DNA structures accumulate at damaged replication forks in sgs1 mutants defective in the yeast ortholog of BLM RecQ helicase. Genes Dev. 19 (2005) 339-350
-
(2005)
Genes Dev.
, vol.19
, pp. 339-350
-
-
Liberi, G.1
Maffioletti, G.2
Lucca, C.3
Chiolo, I.4
Baryshnikova, A.5
Cotta-Ramusino, C.6
Lopes, M.7
Pellicioli, A.8
Haber, J.E.9
Foiani, M.10
-
83
-
-
33750437743
-
Ubc9- and Mms21-mediated sumoylation counteracts recombinogenic events at damaged replication forks
-
Branzei D., Sollier J., Liberi G., Zhao X., Maeda D., Seki M., Enomoto T., Ohta K., and Foiani M. Ubc9- and Mms21-mediated sumoylation counteracts recombinogenic events at damaged replication forks. Cell 127 (2006) 509-522
-
(2006)
Cell
, vol.127
, pp. 509-522
-
-
Branzei, D.1
Sollier, J.2
Liberi, G.3
Zhao, X.4
Maeda, D.5
Seki, M.6
Enomoto, T.7
Ohta, K.8
Foiani, M.9
-
84
-
-
33745541640
-
Mrc1 and Srs2 are major actors in the regulation of spontaneous crossover
-
Robert T., Dervins D., Fabre F., and Gangloff S. Mrc1 and Srs2 are major actors in the regulation of spontaneous crossover. EMBO J. 25 (2006) 2837-2846
-
(2006)
EMBO J.
, vol.25
, pp. 2837-2846
-
-
Robert, T.1
Dervins, D.2
Fabre, F.3
Gangloff, S.4
-
85
-
-
0345447604
-
Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast
-
Ira G., Malkova A., Liberi G., Foiani M., and Haber J.E. Srs2 and Sgs1-Top3 suppress crossovers during double-strand break repair in yeast. Cell 115 (2003) 401-411
-
(2003)
Cell
, vol.115
, pp. 401-411
-
-
Ira, G.1
Malkova, A.2
Liberi, G.3
Foiani, M.4
Haber, J.E.5
-
86
-
-
0025800372
-
DNA topoisomerases: why so many?
-
Wang J.C. DNA topoisomerases: why so many?. J. Biol. Chem. 266 (1991) 6659-6662
-
(1991)
J. Biol. Chem.
, vol.266
, pp. 6659-6662
-
-
Wang, J.C.1
-
87
-
-
33749456218
-
Top3 processes recombination intermediates and modulates checkpoint activity after DNA damage
-
Mankouri H.W., and Hickson I.D. Top3 processes recombination intermediates and modulates checkpoint activity after DNA damage. Mol. Biol. Cell 17 (2006) 4473-4483
-
(2006)
Mol. Biol. Cell
, vol.17
, pp. 4473-4483
-
-
Mankouri, H.W.1
Hickson, I.D.2
-
88
-
-
0347987856
-
The Bloomz's syndrome helicase suppresses crossing over during homologous recombination
-
Wu L., and Hickson I.D. The Bloomz's syndrome helicase suppresses crossing over during homologous recombination. Nature 426 (2003) 870-874
-
(2003)
Nature
, vol.426
, pp. 870-874
-
-
Wu, L.1
Hickson, I.D.2
-
89
-
-
0028033989
-
The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase
-
Gangloff S., McDonald J.P., Bendixen C., Arthur L., and Rothstein R. The yeast type I topoisomerase Top3 interacts with Sgs1, a DNA helicase homolog: a potential eukaryotic reverse gyrase. Mol. Cell. Biol. 14 (1994) 8391-8398
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 8391-8398
-
-
Gangloff, S.1
McDonald, J.P.2
Bendixen, C.3
Arthur, L.4
Rothstein, R.5
|