Electron trap for DNA-bound repair enzymes: A strategy for DNA-mediated signaling

Proceedings of the National Academy of Sciences of the United States of America

Volumn 103, Issue 10, 2006, Pages 3610-3614

  Yavin, Eylon ^a   Stemp, Eric D A ^a   O'Shea, Valerie L ^b   David, Sheila S ^b   Barton, Jacqueline K ^a  

^a California Institute of Technology   (United States)

^b UNIVERSITY OF UTAH   (United States)

Author keywords

Base excision repair; DNA charge transport; Iron sulfur clusters

Indexed keywords

DNA; DNA GLYCOSYLASE MUTY; ENDONUCLEASE; ENDONUCLEASE III; IRON SULFUR PROTEIN; UNCLASSIFIED DRUG;

ARTICLE; BASE PAIRING; DNA BINDING; ELECTROCHEMISTRY; ELECTRON SPIN RESONANCE; ENZYME ACTIVITY; EXCISION REPAIR; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL; SIGNAL TRANSDUCTION;

BASE SEQUENCE; DEOXYRIBONUCLEASE (PYRIMIDINE DIMER); DNA GLYCOSYLASES; DNA REPAIR; DNA REPAIR ENZYMES; DNA, BACTERIAL; ELECTRON SPIN RESONANCE SPECTROSCOPY; ELECTRON TRANSPORT; ESCHERICHIA COLI; ESCHERICHIA COLI PROTEINS; MODELS, BIOLOGICAL; SIGNAL TRANSDUCTION; SPIN LABELS;

EID: 33644857131     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.0600239103     Document Type: Article

References (39)

1. O'Neill, M. A. & Barton, J. K. (2005) in Charge Transfer in DNA: From Mechanism to Application, ed. Wagenknecht, H.-A. (Wiley, Weinheim, Germany), pp. 27-75.
2. Hall, D. B., Holmlin, R. E. & Barton, J. K. (1996) Nature 382, 731-735.
3. Nakatani, K., Dohno, C. & Saito, I. (1999) J. Am. Chem. Soc. 121, 10854-10855.
4. Meggers, E., Kusch, D., Spichty, M., Wille, U. & Giese, B. (1998) Angew. Chem. Int. Ed. 37, 460-462.
5. Gasper, S. M. & Schuster, G. B. (1997) J. Am. Chem. Soc. 119, 12762-12771.
6. Nunez, M. E., Hall, D. B. & Barton, J. K. (1999) Chem. Biol. 6, 85-97.
7. Ly, D., Sanii, L. & Schuster, G. B. (1999) J. Am. Chem. Soc. 121, 9400-9408.
8. Bhattacharya, P. K. & Barton, J. K. (2001) J. Am. Chem. Soc. 123, 8649-8656.
9. Hall, D. B. & Barton, J. K. (1997) J. Am. Chem. Soc. 119, 5045-5046.
10. Rajski, S. R., Kumar, S., Roberts, R. J. & Barton, J. K. (1999) J. Am. Chem. Soc. 121, 5615-5616.
11. Boon, E. M., Salas, J. E. & Barton, J. K. (2002) Nat. Biotechnol. 20, 282-286.
12. Boon, E. M., Ceres, D. M., Drummond, T. G., Hill, M. G. & Barton, J. K. (2000) Nat. Biotechnol. 18, 1096-1100.
13. Breeger, S., Hennecke, U. & Carell, T. (2004) J. Am. Chem. Soc. 126, 1302-1303.
14. Giese, B., Carl, B., Carl, T., Carrel, T., Behrens, C., Hennecke, U., Scheimann, O. & Feresin, E. (2004) Angew. Chem. Int. Ed. 43, 1848-1851.
15. Ito, T. & Rokita, S. E. (2004) J. Am. Chem. Soc. 126, 15552-15559.
16. Boal, A. K. & Barton, J. K. (2005) Bioconjugate Chem. 16, 312-321.
17. Demple, B. & Harrison, L. (1994) Annu. Rev. Biochem. 63, 915-948.
18. Lukianova, O. A. & David, S. S. (2005) Curr. Opin. Chem. Biol. 9, 145-151.
19. Beinert, H. (2000) J. Biol. Inorg. Chem. 5, 2-15.
20. Cunningham, R. P., Asahara, H. & Bank, J. F. (1989) Biochemistry 28, 4450-4455.
21. Mol, C. D., Kuo, C. F., Thayer, M. M., Cunningham, R. P. & Tainer, J. A. (1995) Nature 374, 381-386.
22. Fromme, J. C., Banerjee, A., Huang, S. J. & Verdine, G. L. (2004) Nature 427, 652-656.
23. Fromme, J. C. & Verdine, G. L. (2003) EMBO J. 22, 3461-3471.
24. Guan, Y., Manuel, R. C., Arvai, A. S., Parikh, S. S., Mol, C. D., Miller, J. H., Lloyd, S. & Tainer, J. A. (1998) Nat. Struct. Biol. 5, 1058-1064.
25. Boon, E. M., Livingston, A. L., Chmiel, N. H., David, S. S. & Barton, J. K. (2003) Proc. Natl. Acad. Sci. USA 100, 12543-12547, and correction (2004) 101, 4718.
26. Boal, A. K., Yavin, E., Lukianova, O. A., O'Shea, V. L., David, S. S. & Barton, J. K. (2005) Biochemistry 44, 8397-8407.
27. Cowan, J. A., Lui, S. M. (1998) in Advances in Inorganic Chemistry, ed. Sykes, A. G. (Academic, San Diego), Vol. 45, pp. 313-350.
28. Yavin, E., Boal, A. K., Stemp, E. D. A., Boon, E. M., Livingston, A. L., O'Shea, V. L., David, S. S. & Barton, J. K. (2005) Proc. Natl. Acad. Sci. USA 102, 3546-3551.
29. Francis, A. W. & David, S. S. (2003) Biochemistry 42, 801-805.
30. Verdine, G. L. & Bruner, S. D. (1997) Chem. Biol. 4, 329-334.
31. Gannett, P. M., Darian, E., Powell, J. H. & Johnson, E. M. (2001) Synthetic Comm. 31, 2137-2141.
32. Hickerson, R. P., Prat, F., Muller, J. G., Foote, C. S. & Burrows, C. J. (1999) J. Am. Chem. Soc. 121, 9423-9428.
33. Seidel, C. A. M., Schulz, A. & Sauer, M. H. M. (1996) J. Phys. Chem. 100, 5541-5553.
34. Porello, S. L., Williams, S. D., Kuhn, H., Michaels, M. L. & David, S. S. (1996) J. Am. Chem. Soc. 118, 10684-10692.
35. Sonogashira, K., Tohda, Y. & Hagihara, N. (1975) Tetrahedron Lett. 16, 4467-4470.
36. Thorand, S. & Krause, N. (1998) J. Org. Chem. 63, 8551-8553.
37. Chmeil, N. H., Golinelli, M. P., Francis, A. W. & David, S. S. (2001) Nucleic Acids Res. 29, 553-564.
38. O'Connor, T. R. & Laval, J. (1989) Proc. Natl. Acad. Sci. USA 86, 5222-5226.
39. Dizdaroglu, M., Laval, J. & Boiteux, S. (1993) Biochemistry 32, 12105-12111.