An Extensive Requirement for Transcription Factor IID-specific TAF-1 in Caenorhabditis elegans Embryonic Transcription

Journal of Biological Chemistry

Volumn 279, Issue 15, 2004, Pages 15339-15347

  Walker, Amy K ^a   Shi, Yang ^a   Blackwell, T Keith ^a,b  

^a HARVARD MEDICAL SCHOOL   (United States)

^b JOSLIN DIABETES CENTER   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BINDING ENERGY; COMPLEXATION; PROTEINS; RNA; TISSUE; YEAST;

BINDING PROTEINS; TRANSCRIPTION FACTORS;

BIOCHEMISTRY;

CAENORHABDITIS ELEGANS PROTEIN; MESSENGER RNA; PROTEIN; TATA BINDING PROTEIN; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR IID; TRANSCRIPTION FACTOR SAGA; TRANSCRIPTION FACTOR TAF 1; UNCLASSIFIED DRUG;

ARTICLE; CAENORHABDITIS ELEGANS; COMPLEX FORMATION; EMBRYO DEVELOPMENT; GENE EXPRESSION; GENE FUNCTION; GENETIC TRANSCRIPTION; MEDIATOR RELEASE; METAZOON; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; TISSUE SPECIFICITY; TRANSCRIPTION REGULATION;

ANIMALS; CAENORHABDITIS ELEGANS; CAENORHABDITIS ELEGANS PROTEINS; CHROMOSOMAL PROTEINS, NON-HISTONE; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GREEN FLUORESCENT PROTEINS; HUMANS; IMMUNOBLOTTING; LUMINESCENT PROTEINS; MICROSCOPY, FLUORESCENCE; MODELS, BIOLOGICAL; MODELS, GENETIC; NUCLEAR PROTEINS; PHENOTYPE; PHOSPHORYLATION; PHYLOGENY; PROMOTER REGIONS (GENETICS); PROTEIN STRUCTURE, TERTIARY; RECOMBINANT FUSION PROTEINS; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RNA INTERFERENCE; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; TATA BOX BINDING PROTEIN-LIKE PROTEINS; TATA-BINDING PROTEIN ASSOCIATED FACTORS; TRANS-ACTIVATORS; TRANSCRIPTION FACTOR TFIID; TRANSCRIPTION FACTORS; TRANSCRIPTION, GENETIC;

CAENORHABDITIS; CAENORHABDITIS ELEGANS; INVERTEBRATA; METAZOA;

EID: 2442538276     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M310731200     Document Type: Article

References (71)

1. Malik S., and Roeder, R. G. (2000) Trends Biochem. Sci. 25, 277-283
2. Hochheimer, A., and Tjian, R. (2003) Genes Dev. 17, 1309-1320
3. Holstege, F. C., Jennings, E. G., Wyrick, J. J., Lee, T. I., Hengartner, C. J., Green, M. R., Golub, T. R., Lander, E. S., and Young, R. A. (1998) Cell 95, 717-728
4. Lee, T. I., Causton, H. C., Holstege, F. C., Shen, W. C., Hannett, N., Jennings, E. G., Winston, F., Green, M. R., and Young, R. A. (2000) Nature 405, 701-704
5. Albright, S. R., and Tjian, R. (2000) Gene (Amst.) 242, 1-13
6. Green, M. R. (2000) Trends Biochem. Sci. 25, 59-63
7. Mencia, M., Moqtaderi, Z., Geisberg, J. V., Kuras, L., and Struhl, K. (2002) Mol. Cell 9, 823-833
8. Li, X.-Y., Bhaumik, S. R., Zhu, X., Li, L., Shen, W.-C., Dixit, B. L., and Green, M. R. (2002) Curr. Biol. 12, 1240-1244
9. Chalkley, G. E., and Verrijzer, C. P. (1999) EMBO J. 18, 4835-4845
10. Wassarman, D. A., and Sauer, F. (2001) J. Cell Sci. 114, 2895-2902
11. Shen, W. C., Bhaumik, S. R., Causton, H. C., Simon, I., Zhu, X., Jennings, E. G., Wang, T. H., Young, R. A., and Green, M. R. (2003) EMBO J. 22, 3395-3402
12. Kuras, L., Kosa, P., Mencia, M., and Struhl, K. (2000) Science 288, 1244-1248
13. Li, X. Y., Bhaumik, S. R., and Green, M. R. (2000) Science 288, 1242-1244
14. Komarnitsky, P. B., Michel, B., and Buratowski, S. (1999) Genes Dev. 13, 2484-2489
15. Andel, F., Ladurner, A. G., Inouye, C., Tjian, R., and Nogales, E. (1999) Science 286, 2153-2156
16. Brand, M., Leurent, C., Mallouh, V., Tora, L., and Schultz, P. (1999) Science 286, 2151-2153
17. Leurent, C., Sanders, S., Ruhlmann, C., Mallouh, V., Weil, P. A., Kirschner, D. B., Tora, L., and Schultz, P. (2002) EMBO J. 21, 3424-3433
18. Wassarman, D. A., Aoyagi, N., Pile, L. A., and Schlag, E. M. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 1154-1159
19. O'Brien, T., and Tjian, R. (2000) Proc. Natl. Acad. Sci. U. S. A. 97, 2456-2461
20. Fire, A., Xu, S., Montgomery, M. K., Kostas, S. A., Driver, S. E., and Mello, C. C. (1998) Nature 391, 806-811
21. Powell-Coffman, J. A., Knight, J., and Wood, W. B. (1996) Dev. Biol. 178, 472-483
22. Walker, A. K., Rothman, J. H., Shi, Y., and Blackwell, T. K. (2001) EMBO J. 20, 5269-5279
23. Walker, A. K., and Blackwell, T. K., (2003) J. Biol. Chem. 278, 6181-6186
24. Dantonel, J. C., Quintin, S., Lakatos, L., Labouesse, M., and Tora, L. (2000) Mol. Cell 6, 715-722
25. Kaltenbach, L., Horner, M. A., Rothman, J. H., and Mango, S. E. (2000) Mol. Cell 6, 705-713
26. Hochheimer, A., Zhou, S., Zheng, S., Holmes, M. C., and Tjian, R. (2002) Nature 420, 439-445
27. Tora, L. (2002) Genes Dev. 16, 673-675
28. Schroeder, S. C., Schwer, B., Shuman, S., and Bentley, D. (2000) Genes Dev. 14, 2435-2440
29. Victor, M., Bei, Y., Gay, F., Calvo, D., Mello, C., and Shi, Y. (2002) EMBO Rep. 3, 50-55
30. Newman-Smith, E. D., and Rothman, J. H. (1998) Curr. Opin. Genet. Dev. 8, 472-480
31. Shim, E. Y., Walker, A. K., Shi, Y., and Blackwell, T. K. (2002) Genes Dev. 16, 2135-2146
32. Reese, K. J., Dunn, M. A., Waddle, J. A., and Seydoux, G. (2000) Mol. Cell 6, 445-455
33. Dahmus, M. E. (1996) J. Biol. Chem. 271, 19009-19012
34. Komarnitsky, P., Cho, E. J., and Buratowski, S. (2000) Genes Dev. 14, 2452-2460
35. Cho, E. J., Kobor, M. S., Kim, M., Greenblatt, J., and Buratowski, S. (2001) Genes Dev. 15, 3319-3329
36. Price, D. H. (2000) Mol. Cell. Biol. 20, 2629-2634
37. Seydoux, G., and Dunn, M. A. (1997) Development 124, 2191-2201
38. Shim, E. Y., Walker, A. K., and Blackwell, T. K. (2002) J. Biol. Chem. 277, 30413-30416
39. Hill, A., Hunter, C. P., Tsung, B., Tucker-Kellogg, G., and Brown, E. (2000) Science 290, 809-812
40. Baugh, L., Hill, A., Slonim, D., Brown, E., and Hunter, C. (2003) Development 130, 889-900
41. Maduro, M. F., Meneghini, M. D., Bowerman, B., Broitman-Maduro, G., and Rothman, J. H. (2001) Mol. Cell 7, 475-485
42. Horner, M. A., Quintin, S., Domeier, M. E., Kimble, J., Labouesse, M., and Mango, S. E. (1998) Genes Dev. 12, 1947-1952
43. Kalb, J. M., Lau, K. K., Goszczynski, B., Fukushige, T., Moons, D., Okkema, P. G., and McGhee, J. D. (1998) Development 125, 2171-2180
44. Calvo, D., Victor, M., Gay, F., Sui, G., Luke, M. P., Dufourcq, P., Wen, G., Maduro, M., Rothman, J., and Shi, Y. (2001) EMBO J. 20, 7197-7208
45. Veenstra, G. J., Weeks, D. L., and Wolffe, A. P. (2000) Science 290, 2312-2315
46. Muller, F., Lakatos, L., Dantonel, J., Strahle, U., and Tora, L. (2001) Curr. Biol. 11, 282-287
47. Martianov, I., Fimia, G. M., Dierich, A., Parvinen, M., Sazsone-Corsi, P., and Davidson, I. (2001) Mol. Cell 7, 509-515
48. Hardy, S., Brand, M., Mittler, G., Yanagisawa, J., Kato, S., Meisterernst, M., and Tora, L. (2002) J. Biol. Chem. 277, 32875-32882
49. Shi, Y., and Mello, C. (1998) Genes Dev. 12, 943-955
50. Brand, M., Yamamoto, K., Staub, A., and Tora, L. (1999) J. Biol. Chem. 274, 18285-18289
51. Seydoux, G., Mello, C. C., Pettitt, J., Wood, W. B., Priess, J. R., and Fire, A. (1996) Nature 382, 713-716
52. Batchelder, C., Dunn, M. A., Choy, B., Suh, Y., Cassie, C., Shin, E. Y., Shin, T. H., Mello, C., Seydoux, G., and Blackwell, T. K. (1999) Genes Dev. 13, 202-212
53. Zhang, F., Barboric, M., Blackwell, T. K., and Peterlin, B. M. (2003) Genes Dev. 17, 748-758
54. Wallenfang, M. R., and Seydoux, G. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 5527-5532
55. Takagi, T., Walker, A. Y., Sawa, C., Diehn, F., Takase, Y., Blackwell, T. K., and Buratowski, S. (2003) J. Biol. Chem. 278, 14174-14184
56. Jacobson, R. H., Ladurner, A. G., King, D. S., and Tjian, R. (2000) Science 288, 1422-1425
57. Matangkasombut, O., Buratowski, R. M., Swilling, N. W., and Buratowski, S. (2000) Genes Dev. 14, 951-962
58. Matangkasombut, O., and Buratowski, S. (2003) Mol. Cell 11, 353-363
59. Ladurner, A. G., Inouye, C., Jain, R., and Tjian, R. (2003) Mol. Cell 11, 365-376
60. Smale, S. T., and Kadonaga, J. T. (2003) Annu. Rev. Biochem. 72, 449-479
61. Martianov, I., Brancorsini, S., Gansmuller, A., Parvinen, M., Davidson, I., and Sassone-Corsi, P. (2002) Development 129, 945-955
62. Cosma, M. P. (2002) Mol. Cell 10, 227-236
63. Hunter, C. P., and Kenyon, C. (1996) Cell 87, 217-226
64. Bowerman, B., Ingram, M. K., and Hunter, C. P. (1997) Development 124, 3815-3826
65. Reese, J. C., Zhang, Z., and Kurpad, H. (2000) J. Biol. Chem. 275, 17391-17398
66. Apone, L. M., Virbasius, C. M., Reese, J. C., and Green, M. R. (1996) Genes Dev. 10, 2368-2380
67. Durso, R. J., Fisher, A. K., Albright-Frey, T. J., and Reese, J. C. (2001) Mol. Cell. Biol. 21, 7331-7344
68. Apone, L. M., Virbasius, C. A., Holstege, F. C., Wang, J., Young, R. A., and Green, M. R. (1998) Mol. Cell 2, 653-661
69. Michel, B., Komarnitsky, P., and Buratowski, S. (1998) Mol. Cell 2, 663-673
70. Moqtaderi, Z., Keaveney, M., and Struhl, K. (1998) Mol. Cell 2, 675-682
71. Sanders, S. L., klebanow, E. R., and Weil, P. A. (1999) J. Biol. Chem. 274, 18847-18850