-
1
-
-
0036850346
-
Deciphering the transcriptional histone acetylation code for a human gene
-
Agalioti T., Chen G., Thanos D. Deciphering the transcriptional histone acetylation code for a human gene. Cell. 111:2002;381-392.
-
(2002)
Cell
, vol.111
, pp. 381-392
-
-
Agalioti, T.1
Chen, G.2
Thanos, D.3
-
2
-
-
0033969766
-
TAFs revisited: More data reveal new twists and confirm old ideas
-
Albright S.R., Tjian R. TAFs revisited. more data reveal new twists and confirm old ideas Gene. 242:2000;1-13.
-
(2000)
Gene
, vol.242
, pp. 1-13
-
-
Albright, S.R.1
Tjian, R.2
-
3
-
-
0033567954
-
NuA4, an essential transcription adaptor/histone H4 acetyltransferase complex containing Esa1p and the ATM-related cofactor Tra1p
-
Allard S., Utley R.T., Savard J., Clarke A., Grant P., Brandl C.J., Pillus L., Workman J.L., Cote J. NuA4, an essential transcription adaptor/histone H4 acetyltransferase complex containing Esa1p and the ATM-related cofactor Tra1p. EMBO J. 18:1999;5108-5119.
-
(1999)
EMBO J.
, vol.18
, pp. 5108-5119
-
-
Allard, S.1
Utley, R.T.2
Savard, J.3
Clarke, A.4
Grant, P.5
Brandl, C.J.6
Pillus, L.7
Workman, J.L.8
Cote, J.9
-
4
-
-
0004265596
-
-
New York: John Wiley and Sons
-
Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., Struhl K. Current Protocols in Molecular Biology. 1991;John Wiley and Sons, New York.
-
(1991)
Current Protocols in Molecular Biology
-
-
Ausubel, F.M.1
Brent, R.2
Kingston, R.E.3
Moore, D.D.4
Seidman, J.G.5
Smith, J.A.6
Struhl, K.7
-
5
-
-
0037179692
-
Acetylation of histone H4 by Esa1 is required for DNA double-strand break repair
-
Bird A.W., Yu D.Y., Pray-Grant M.G., Qiu Q., Harmon K.E., Megee P.C., Grant P.A., Smith M.M., Christman M.F. Acetylation of histone H4 by Esa1 is required for DNA double-strand break repair. Nature. 419:2002;411-415.
-
(2002)
Nature
, vol.419
, pp. 411-415
-
-
Bird, A.W.1
Yu, D.Y.2
Pray-Grant, M.G.3
Qiu, Q.4
Harmon, K.E.5
Megee, P.C.6
Grant, P.A.7
Smith, M.M.8
Christman, M.F.9
-
6
-
-
0032579440
-
Designer deletion strains derived from Saccharomyces cerevisiae S288C: A useful set of strains and plasmids for PCR-mediated gene disruption and other applications
-
Brachmann C.B., Davies A., Cost G.J., Caputo E., Li J., Hieter P., Boeke J.D. Designer deletion strains derived from Saccharomyces cerevisiae S288C. a useful set of strains and plasmids for PCR-mediated gene disruption and other applications Yeast. 14:1998;115-132.
-
(1998)
Yeast
, vol.14
, pp. 115-132
-
-
Brachmann, C.B.1
Davies, A.2
Cost, G.J.3
Caputo, E.4
Li, J.5
Hieter, P.6
Boeke, J.D.7
-
7
-
-
0030013203
-
Biochemistry and structural biology of transcription factor IID (TFIID)
-
Burley S.K., Roeder R.G. Biochemistry and structural biology of transcription factor IID (TFIID). Annu. Rev. Biochem. 65:1996;769-799.
-
(1996)
Annu. Rev. Biochem.
, vol.65
, pp. 769-799
-
-
Burley, S.K.1
Roeder, R.G.2
-
8
-
-
0029041887
-
Bdf1, a yeast chromosomal protein required for sporulation
-
Chua P., Roeder G.S. Bdf1, a yeast chromosomal protein required for sporulation. Mol. Cell. Biol. 15:1995;3685-3696.
-
(1995)
Mol. Cell. Biol.
, vol.15
, pp. 3685-3696
-
-
Chua, P.1
Roeder, G.S.2
-
9
-
-
0032965152
-
Esa1p is an essential histone acetyltransferase required for cell cycle progression
-
Clarke A.S., Lowell J.E., Jacobson S.J., Pillus L. Esa1p is an essential histone acetyltransferase required for cell cycle progression. Mol. Cell. Biol. 19:1999;2515-2526.
-
(1999)
Mol. Cell. Biol.
, vol.19
, pp. 2515-2526
-
-
Clarke, A.S.1
Lowell, J.E.2
Jacobson, S.J.3
Pillus, L.4
-
10
-
-
0030027058
-
A novel, mitogen-activated nuclear kinase is related to a Drosophila developmental regulator
-
Denis G.V., Green M.R. A novel, mitogen-activated nuclear kinase is related to a Drosophila developmental regulator. Genes Dev. 10:1996;261-271.
-
(1996)
Genes Dev.
, vol.10
, pp. 261-271
-
-
Denis, G.V.1
Green, M.R.2
-
11
-
-
0033842522
-
A bromodomain protein, MCAP, associates with mitotic chromosomes and affects G(2)-to-M transition
-
Dey A., Ellenberg J., Farina A., Coleman A.E., Maruyama T., Sciortino S., Lippincott-Schwartz J., Ozato K. A bromodomain protein, MCAP, associates with mitotic chromosomes and affects G(2)-to-M transition. Mol. Cell. Biol. 20:2000;6537-6549.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 6537-6549
-
-
Dey, A.1
Ellenberg, J.2
Farina, A.3
Coleman, A.E.4
Maruyama, T.5
Sciortino, S.6
Lippincott-Schwartz, J.7
Ozato, K.8
-
12
-
-
0033519641
-
Structure and ligand of a histone acetyltransferase bromodomain
-
Dhalluin C., Carlson J.E., Zeng L., He C., Aggarwal A.K., Zhou M.M. Structure and ligand of a histone acetyltransferase bromodomain. Nature. 399:1999;491-496.
-
(1999)
Nature
, vol.399
, pp. 491-496
-
-
Dhalluin, C.1
Carlson, J.E.2
Zeng, L.3
He, C.4
Aggarwal, A.K.5
Zhou, M.M.6
-
13
-
-
0034791302
-
Analysis of TAF90 mutants displaying allele-specific and broad defects in transcription
-
Durso R.J., Fisher A.K., Albright-Frey T.J., Reese J.C. Analysis of TAF90 mutants displaying allele-specific and broad defects in transcription. Mol. Cell. Biol. 21:2001;7331-7344.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 7331-7344
-
-
Durso, R.J.1
Fisher, A.K.2
Albright-Frey, T.J.3
Reese, J.C.4
-
14
-
-
0035312923
-
The histone fold is a key structural motif of transcription factor TFIID
-
Gangloff Y.G., Romier C., Thuault S., Werten S., Davidson I. The histone fold is a key structural motif of transcription factor TFIID. Trends Biochem. Sci. 26:2001;250-257.
-
(2001)
Trends Biochem. Sci.
, vol.26
, pp. 250-257
-
-
Gangloff, Y.G.1
Romier, C.2
Thuault, S.3
Werten, S.4
Davidson, I.5
-
15
-
-
0026562884
-
Improved method for high efficiency transformation of intact yeast cells
-
Gietz D., St Jean A., Woods R.A., Schiestl R.H. Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res. 20:1992;1425.
-
(1992)
Nucleic Acids Res.
, vol.20
, pp. 1425
-
-
Gietz, D.1
St Jean, A.2
Woods, R.A.3
Schiestl, R.H.4
-
16
-
-
0032504104
-
A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation
-
a
-
Grant P.A., Schieltz D., Pray-Grant M.G., Steger D.J., Reese J.C., Yates J.R. III, Workman J.L. A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation. Cell. 94:1998;45-53. a.
-
(1998)
Cell
, vol.94
, pp. 45-53
-
-
Grant, P.A.1
Schieltz, D.2
Pray-Grant, M.G.3
Steger, D.J.4
Reese, J.C.5
Yates J.R. III6
Workman, J.L.7
-
17
-
-
0032080848
-
The SAGA unfolds: Convergence of transcription regulators in chromatin- modifying complexes
-
b
-
Grant P.A., Sterner D.E., Duggan L.J., Workman J.L., Berger S.L. The SAGA unfolds. convergence of transcription regulators in chromatin- modifying complexes Trends Cell Biol. 8:1998;193-197. b.
-
(1998)
Trends Cell Biol.
, vol.8
, pp. 193-197
-
-
Grant, P.A.1
Sterner, D.E.2
Duggan, L.J.3
Workman, J.L.4
Berger, S.L.5
-
18
-
-
0033964073
-
TBP-associated factors (TAFIIs): Multiple, selective transcriptional mediators in common complexes
-
Green M.R. TBP-associated factors (TAFIIs). multiple, selective transcriptional mediators in common complexes Trends Biochem. Sci. 25:2000;59-63.
-
(2000)
Trends Biochem. Sci.
, vol.25
, pp. 59-63
-
-
Green, M.R.1
-
19
-
-
0030798245
-
Histone acetylation in chromatin structure and transcription
-
Grunstein M. Histone acetylation in chromatin structure and transcription. Nature. 389:1997;349-352.
-
(1997)
Nature
, vol.389
, pp. 349-352
-
-
Grunstein, M.1
-
20
-
-
0025994140
-
Guide to yeast genetics and molecular biology
-
San Diego: Academic Press
-
Guthrie, C., and Fink, G.R. (1991). Guide to Yeast Genetics and Molecular Biology. Methods in Enzymology, Volume 194 (San Diego: Academic Press).
-
(1991)
Methods in Enzymology
, vol.194
-
-
Guthrie, C.1
Fink, G.R.2
-
21
-
-
0000247720
-
Promoter targeting of chromatin-modifying complexes
-
Hassan A.H., Neely K.E., Vignali M., Reese J.C., Workman J.L. Promoter targeting of chromatin-modifying complexes. Front. Biosci. 6:2001;D1054-D1064.
-
(2001)
Front. Biosci.
, vol.6
-
-
Hassan, A.H.1
Neely, K.E.2
Vignali, M.3
Reese, J.C.4
Workman, J.L.5
-
22
-
-
0028919756
-
Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins: A molecular model for the formation of heterochromatin in yeast
-
Hecht A., Laroche T., Strahl-Bolsinger S., Gasser S.M., Grunstein M. Histone H3 and H4 N-termini interact with SIR3 and SIR4 proteins. a molecular model for the formation of heterochromatin in yeast Cell. 80:1995;583-592.
-
(1995)
Cell
, vol.80
, pp. 583-592
-
-
Hecht, A.1
Laroche, T.2
Strahl-Bolsinger, S.3
Gasser, S.M.4
Grunstein, M.5
-
23
-
-
0024520745
-
Site-directed mutagenesis by overlap extension using the polymerase chain reaction
-
Ho S.N., Hunt H.D., Horton R.M., Pullen J.K., Pease L.R. Site-directed mutagenesis by overlap extension using the polymerase chain reaction. Gene. 77:1989;51-59.
-
(1989)
Gene
, vol.77
, pp. 51-59
-
-
Ho, S.N.1
Hunt, H.D.2
Horton, R.M.3
Pullen, J.K.4
Pease, L.R.5
-
24
-
-
0034387879
-
Solution structure and acetyl-lysine binding activity of the GCN5 bromodomain
-
Hudson B.P., Martinez-Yamout M.A., Dyson H.J., Wright P.E. Solution structure and acetyl-lysine binding activity of the GCN5 bromodomain. J. Mol. Biol. 304:2000;355-370.
-
(2000)
J. Mol. Biol.
, vol.304
, pp. 355-370
-
-
Hudson, B.P.1
Martinez-Yamout, M.A.2
Dyson, H.J.3
Wright, P.E.4
-
25
-
-
0034717183
-
Structure and function of a human TAFII250 double bromodomain module
-
Jacobson R.H., Ladurner A.G., King D.S., Tjian R. Structure and function of a human TAFII250 double bromodomain module. Science. 288:2000;1422-1425.
-
(2000)
Science
, vol.288
, pp. 1422-1425
-
-
Jacobson, R.H.1
Ladurner, A.G.2
King, D.S.3
Tjian, R.4
-
26
-
-
0031138034
-
The bromodomain revisited
-
Jeanmougin F., Wurtz J.M., Le Douarin B., Chambon P., Losson R. The bromodomain revisited. Trends Biochem. Sci. 22:1997;151-153.
-
(1997)
Trends Biochem. Sci.
, vol.22
, pp. 151-153
-
-
Jeanmougin, F.1
Wurtz, J.M.2
Le Douarin, B.3
Chambon, P.4
Losson, R.5
-
27
-
-
0035839136
-
Translating the histone code
-
Jenuwein T., Allis C.D. Translating the histone code. Science. 293:2001;1074-1080.
-
(2001)
Science
, vol.293
, pp. 1074-1080
-
-
Jenuwein, T.1
Allis, C.D.2
-
28
-
-
0034307008
-
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
-
Komarnitsky P., Cho E.J., Buratowski S. Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription. Genes Dev. 14:2000;2452-2460.
-
(2000)
Genes Dev.
, vol.14
, pp. 2452-2460
-
-
Komarnitsky, P.1
Cho, E.J.2
Buratowski, S.3
-
29
-
-
0033542436
-
Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme
-
Kuras L., Struhl K. Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme. Nature. 399:1999;609-613.
-
(1999)
Nature
, vol.399
, pp. 609-613
-
-
Kuras, L.1
Struhl, K.2
-
30
-
-
0034686037
-
TAF-containing and TAF-independent forms of transcriptionally active TBP in vivo
-
Kuras L., Kosa P., Mencia M., Struhl K. TAF-containing and TAF-independent forms of transcriptionally active TBP in vivo. Science. 288:2000;1244-1248.
-
(2000)
Science
, vol.288
, pp. 1244-1248
-
-
Kuras, L.1
Kosa, P.2
Mencia, M.3
Struhl, K.4
-
31
-
-
0034686001
-
Distinct classes of yeast promoters revealed by differential TAF recruitment
-
Li X.Y., Bhaumik S.R., Green M.R. Distinct classes of yeast promoters revealed by differential TAF recruitment. Science. 288:2000;1242-1244.
-
(2000)
Science
, vol.288
, pp. 1242-1244
-
-
Li, X.Y.1
Bhaumik, S.R.2
Green, M.R.3
-
33
-
-
0028630680
-
The yeast BDF1 gene encodes a transcription factor involved in the expression of a broad class of genes including snRNAs
-
Lygerou Z., Conesa C., Lesage P., Swanson R.N., Ruet A., Carlson M., Sentenac A., Seraphin B. The yeast BDF1 gene encodes a transcription factor involved in the expression of a broad class of genes including snRNAs. Nucleic Acids Res. 22:1994;5332-5340.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5332-5340
-
-
Lygerou, Z.1
Conesa, C.2
Lesage, P.3
Swanson, R.N.4
Ruet, A.5
Carlson, M.6
Sentenac, A.7
Seraphin, B.8
-
34
-
-
0035845006
-
Structure and function of bromodomains in chromatin-regulating complexes
-
Marmorstein R., Berger S.L. Structure and function of bromodomains in chromatin-regulating complexes. Gene. 272:2001;1-9.
-
(2001)
Gene
, vol.272
, pp. 1-9
-
-
Marmorstein, R.1
Berger, S.L.2
-
35
-
-
0036724194
-
A mammalian bromodomain protein, brd4, interacts with replication factor C and inhibits progression to S phase
-
Maruyama T., Farina A., Dey A., Cheong J., Bermudez V.P., Tamura T., Sciortino S., Shuman J., Hurwitz J., Ozato K. A mammalian bromodomain protein, brd4, interacts with replication factor C and inhibits progression to S phase. Mol. Cell. Biol. 22:2002;6509-6520.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 6509-6520
-
-
Maruyama, T.1
Farina, A.2
Dey, A.3
Cheong, J.4
Bermudez, V.P.5
Tamura, T.6
Sciortino, S.7
Shuman, J.8
Hurwitz, J.9
Ozato, K.10
-
37
-
-
0025093599
-
Genetic analysis of histone H4: Essential role of lysines subject to reversible acetylation
-
Megee P.C., Morgan B.A., Mittman B.A., Smith M.M. Genetic analysis of histone H4. essential role of lysines subject to reversible acetylation Science. 247:1990;841-845.
-
(1990)
Science
, vol.247
, pp. 841-845
-
-
Megee, P.C.1
Morgan, B.A.2
Mittman, B.A.3
Smith, M.M.4
-
38
-
-
0032214125
-
Histone-like TAFs are essential for transcription in vivo
-
Michel B., Komarnitsky P., Buratowski S. Histone-like TAFs are essential for transcription in vivo. Mol. Cell. 2:1998;663-673.
-
(1998)
Mol. Cell
, vol.2
, pp. 663-673
-
-
Michel, B.1
Komarnitsky, P.2
Buratowski, S.3
-
39
-
-
0033582943
-
The bromodomain of Gcn5p interacts in vitro with specific residues in the N terminus of histone H4
-
Ornaghi P., Ballario P., Lena A.M., Gonzalez A., Filetici P. The bromodomain of Gcn5p interacts in vitro with specific residues in the N terminus of histone H4. J. Mol. Biol. 287:1999;1-7.
-
(1999)
J. Mol. Biol.
, vol.287
, pp. 1-7
-
-
Ornaghi, P.1
Ballario, P.2
Lena, A.M.3
Gonzalez, A.4
Filetici, P.5
-
40
-
-
0034669210
-
The structural basis for the recognition of acetylated histone H4 by the bromodomain of histone acetyltransferase gcn5p
-
Owen D.J., Ornaghi P., Yang J.C., Lowe N., Evans P.R., Ballario P., Neuhaus D., Filetici P., Travers A.A. The structural basis for the recognition of acetylated histone H4 by the bromodomain of histone acetyltransferase gcn5p. EMBO J. 19:2000;6141-6149.
-
(2000)
EMBO J.
, vol.19
, pp. 6141-6149
-
-
Owen, D.J.1
Ornaghi, P.2
Yang, J.C.3
Lowe, N.4
Evans, P.R.5
Ballario, P.6
Neuhaus, D.7
Filetici, P.8
Travers, A.A.9
-
41
-
-
0035805232
-
Bromodomain factor 1 (Bdf1) protein interacts with histones
-
Pamblanco M., Poveda A., Sendra R., Rodriguez-Navarro S., Perez-Ortin J.E., Tordera V. Bromodomain factor 1 (Bdf1) protein interacts with histones. FEBS Lett. 496:2001;31-35.
-
(2001)
FEBS Lett.
, vol.496
, pp. 31-35
-
-
Pamblanco, M.1
Poveda, A.2
Sendra, R.3
Rodriguez-Navarro, S.4
Perez-Ortin, J.E.5
Tordera, V.6
-
42
-
-
0034609446
-
Control of gene expression through regulation of the TATA-binding protein
-
Pugh B.F. Control of gene expression through regulation of the TATA-binding protein. Gene. 255:2000;1-14.
-
(2000)
Gene
, vol.255
, pp. 1-14
-
-
Pugh, B.F.1
-
43
-
-
0034515772
-
Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylase
-
Reid J.L., Iyer V.R., Brown P.O., Struhl K. Coordinate regulation of yeast ribosomal protein genes is associated with targeted recruitment of Esa1 histone acetylase. Mol. Cell. 6:2000;1297-1307.
-
(2000)
Mol. Cell
, vol.6
, pp. 1297-1307
-
-
Reid, J.L.1
Iyer, V.R.2
Brown, P.O.3
Struhl, K.4
-
45
-
-
0034892335
-
A histone fold TAF octamer within the yeast TFIID transcriptional coactivator
-
Selleck W., Howley R., Fang Q., Podolny V., Fried M.G., Buratowski S., Tan S. A histone fold TAF octamer within the yeast TFIID transcriptional coactivator. Nat. Struct. Biol. 8:2001;695-700.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 695-700
-
-
Selleck, W.1
Howley, R.2
Fang, Q.3
Podolny, V.4
Fried, M.G.5
Buratowski, S.6
Tan, S.7
-
46
-
-
0034610814
-
The language of covalent histone modifications
-
Strahl B.D., Allis C.D. The language of covalent histone modifications. Nature. 403:2000;41-45.
-
(2000)
Nature
, vol.403
, pp. 41-45
-
-
Strahl, B.D.1
Allis, C.D.2
-
47
-
-
0034704815
-
The Gcn5 bromodomain co-ordinates nucleosome remodelling
-
Syntichaki P., Topalidou I., Thireos G. The Gcn5 bromodomain co-ordinates nucleosome remodelling. Nature. 404:2000;414-417.
-
(2000)
Nature
, vol.404
, pp. 414-417
-
-
Syntichaki, P.1
Topalidou, I.2
Thireos, G.3
-
48
-
-
0030249382
-
TAFs mediate transcriptional activation and promoter selectivity
-
Verrijzer C.P., Tjian R. TAFs mediate transcriptional activation and promoter selectivity. Trends Biochem. Sci. 21:1996;338-342.
-
(1996)
Trends Biochem. Sci.
, vol.21
, pp. 338-342
-
-
Verrijzer, C.P.1
Tjian, R.2
-
49
-
-
0034707037
-
Global histone acetylation and deacetylation in yeast
-
Vogelauer M., Wu J., Suka N., Grunstein M. Global histone acetylation and deacetylation in yeast. Nature. 408:2000;495-498.
-
(2000)
Nature
, vol.408
, pp. 495-498
-
-
Vogelauer, M.1
Wu, J.2
Suka, N.3
Grunstein, M.4
-
50
-
-
0028676232
-
New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae
-
Wach A., Brachat A., Pohlmann R., Philippsen P. New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae. Yeast. 10:1994;1793-1808.
-
(1994)
Yeast
, vol.10
, pp. 1793-1808
-
-
Wach, A.1
Brachat, A.2
Pohlmann, R.3
Philippsen, P.4
-
51
-
-
0034724871
-
Steady-state levels of histone acetylation in Saccharomyces cerevisiae
-
Waterborg J.H. Steady-state levels of histone acetylation in Saccharomyces cerevisiae. J. Biol. Chem. 275:2000;13007-13011.
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 13007-13011
-
-
Waterborg, J.H.1
-
52
-
-
0031707751
-
Alteration of nucleosome structure as a mechanism of transcriptional regulation
-
Workman J.L., Kingston R.E. Alteration of nucleosome structure as a mechanism of transcriptional regulation. Annu. Rev. Biochem. 67:1998;545-579.
-
(1998)
Annu. Rev. Biochem.
, vol.67
, pp. 545-579
-
-
Workman, J.L.1
Kingston, R.E.2
-
53
-
-
0032101179
-
Essential and redundant functions of histone acetylation revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase
-
Zhang W., Bone J.R., Edmondson D.G., Turner B.M., Roth S.Y. Essential and redundant functions of histone acetylation revealed by mutation of target lysines and loss of the Gcn5p acetyltransferase. EMBO J. 17:1998;3155-3167.
-
(1998)
EMBO J.
, vol.17
, pp. 3155-3167
-
-
Zhang, W.1
Bone, J.R.2
Edmondson, D.G.3
Turner, B.M.4
Roth, S.Y.5
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