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Volumn 13, Issue 8, 2003, Pages 1463-1467

Design, synthesis, and structure-activity relationship of a new class of amidinophenylurea-based factor VIIa inhibitors

Author keywords

[No Author keywords available]

Indexed keywords

BLOOD CLOTTING FACTOR 7A; BLOOD CLOTTING INHIBITOR; CARBANILAMIDE DERIVATIVE;

EID: 0037451846     PISSN: 0960894X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0960-894X(03)00168-9     Document Type: Article
Times cited : (39)

References (31)
  • 16
    • 0000715391 scopus 로고    scopus 로고
    • PCT Patent WO 9941231
    • Senokuchi K., Ogawa K. PCT Patent WO 9941231. Chem. Abstr. 131:1999;184864.
    • (1999) Chem. Abstr. , vol.131 , pp. 184864
    • Senokuchi, K.1    Ogawa, K.2
  • 24
    • 5544242529 scopus 로고    scopus 로고
    • Modeling was done using Sybyl 6.5-6.8 (Tripos). Energy calculations were based on the MMFF94s force field (Halgren, T. J. Comp. Chem. 1999, 20, 720-729.). Protein-ligand complexes were minimized using the quasi-Newton-Raphson procedure. For manual docking, ligands were placed in the fVIIa binding site and optimized treating all side chains within 4 Å flexible. Automated docking was carried out using FlexX (21) and QXP (22).
  • 27
    • 0012686510 scopus 로고
    • Wiley, New York
    • Patai S. 1975;283-348. Wiley, New York
    • (1975) , pp. 283-348
    • Patai, S.1
  • 28
    • 85031207851 scopus 로고    scopus 로고
    • note
    • TOTU: O-[Ethoxycarbonyl)cyanomethylenamino]-N,N,N′,N′-tetramethyl- uronium tetrafluoro-borate; König, W.; Breipohl, G.; Pokorny, P.; Birkner, M. Proceedings of the 21st European Peptide Symposium 1990; Giralt, E., Andren, D, Eds.; ESCOM, Leiden, 1990, p 143.
  • 29
    • 0029111451 scopus 로고    scopus 로고
    • 1 with a=70.08 Å, b=81.74 Å and c=126.17 Å. Initial phases were calculated using the structure by Banner (20) as starting model. The inhibitor was fitted using Quanta and refined using CNX (Accelrys). The final R-factor was 20.0% (R-free=25.0%). The benzamidine and urea parts of the inhibitor are well defined in the electron density maps, while the two phenyl groups and the peptide linker have poor electron density indicating some disorder.
  • 30
    • 85031195712 scopus 로고    scopus 로고
    • note
    • The pKa values were measured by UV difference spectroscopy on a Sirius SGA profiler.


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.