메뉴 건너뛰기




Volumn 18, Issue 23, 1999, Pages 6585-6598

Light and dark in chromatin repair: Repair of UV-induced DNA lesions by photolyase and nucteotide excision repair

Author keywords

Chromatin; DNA repair; Nucleotide excision repair; Photolyase; Transcription

Indexed keywords

DEOXYRIBODIPYRIMIDINE PHOTOLYASE; DNA; DNA BINDING PROTEIN;

EID: 0033486110     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Review
Times cited : (214)

References (182)
  • 1
    • 0032005792 scopus 로고    scopus 로고
    • Nucleotide excision repair and photolyase preferentially repair the nontranscribed strand of RNA polymerase III-transcribed genes in Saccharomyces cerevisiae
    • Aboussekhra, A. and Thoma, F. (1998) Nucleotide excision repair and photolyase preferentially repair the nontranscribed strand of RNA polymerase III-transcribed genes in Saccharomyces cerevisiae. Genes Dev., 12, 411-421.
    • (1998) Genes Dev. , vol.12 , pp. 411-421
    • Aboussekhra, A.1    Thoma, F.2
  • 2
    • 0033556098 scopus 로고    scopus 로고
    • TATA-binding protein promotes the selective formation of UV-induced (6-4)-photoproducts and modulates DNA repair in the TATA box
    • Aboussekhra, A. and Thoma, F. (1999) TATA-binding protein promotes the selective formation of UV-induced (6-4)-photoproducts and modulates DNA repair in the TATA box. EMBO J., 18, 433-443.
    • (1999) EMBO J. , vol.18 , pp. 433-443
    • Aboussekhra, A.1    Thoma, F.2
  • 3
    • 0027166716 scopus 로고
    • GAL4 disrupts a repressing nucleosome during activation of GAL1 transcription in vivo
    • Axelrod, J.D., Reagan, M.S. and Majors, J. (1993) GAL4 disrupts a repressing nucleosome during activation of GAL1 transcription in vivo. Genes Dev., 7, 857-869.
    • (1993) Genes Dev. , vol.7 , pp. 857-869
    • Axelrod, J.D.1    Reagan, M.S.2    Majors, J.3
  • 5
    • 0032504244 scopus 로고    scopus 로고
    • Nucleosome unfolding during DNA repair in normal and xeroderma pigmentosum (group C) human cells
    • Baxter, B.K. and Smerdon, M.J. (1998) Nucleosome unfolding during DNA repair in normal and xeroderma pigmentosum (group C) human cells. J. Biol. Chem., 273, 17517-17524.
    • (1998) J. Biol. Chem. , vol.273 , pp. 17517-17524
    • Baxter, B.K.1    Smerdon, M.J.2
  • 6
    • 0018036889 scopus 로고
    • Mobility of histones on the chromosome of simian virus 40
    • Beard, P. (1978) Mobility of histones on the chromosome of simian virus 40. Cell, 15, 955-967.
    • (1978) Cell , vol.15 , pp. 955-967
    • Beard, P.1
  • 7
    • 0021190168 scopus 로고
    • Use of light for footprinting DNA in vivo
    • Becker, M.M. and Wang, J.C. (1984) Use of light for footprinting DNA in vivo. Nature, 309, 682-687.
    • (1984) Nature , vol.309 , pp. 682-687
    • Becker, M.M.1    Wang, J.C.2
  • 8
    • 0024844259 scopus 로고
    • Origin of ultraviolet damage in DNA
    • Becker, M.M. and Wang, Z. (1989) Origin of ultraviolet damage in DNA. J. Mol. Biol., 210, 429-438.
    • (1989) J. Mol. Biol. , vol.210 , pp. 429-438
    • Becker, M.M.1    Wang, Z.2
  • 10
    • 0026757373 scopus 로고
    • Transcription, nucleosome stability and DNA repair in a yeast minichromosome
    • Bedoyan, J., Gupta, R., Thoma, F. and Smerdon, M.J. (1992) Transcription, nucleosome stability and DNA repair in a yeast minichromosome. J. Biol. Chem., 267, 5996-6005.
    • (1992) J. Biol. Chem. , vol.267 , pp. 5996-6005
    • Bedoyan, J.1    Gupta, R.2    Thoma, F.3    Smerdon, M.J.4
  • 11
    • 0019887628 scopus 로고
    • Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory
    • Berg, O.G., Winter, R.B. and von Hippel, P.H. (1981) Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory. Biochemistry, 20, 6929-6948.
    • (1981) Biochemistry , vol.20 , pp. 6929-6948
    • Berg, O.G.1    Winter, R.B.2    Von Hippel, P.H.3
  • 12
    • 0029793038 scopus 로고    scopus 로고
    • Molecular cloning and characterization of Saccharomyces cerevisiae RAD28, the yeast homolog of the human cockayne syndrome A (CSA) gene
    • Bhatia, P.K., Verhage, R.A., Brouwer, J. and Friedberg, E.C. (1996) Molecular cloning and characterization of Saccharomyces cerevisiae RAD28, the yeast homolog of the human Cockayne syndrome A (CSA) gene. J. Bacteriol., 178, 5977-5988.
    • (1996) J. Bacteriol. , vol.178 , pp. 5977-5988
    • Bhatia, P.K.1    Verhage, R.A.2    Brouwer, J.3    Friedberg, E.C.4
  • 13
    • 0021905437 scopus 로고
    • DNA repair in an active gene: Removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall
    • Bohr, V.A., Smith, C.A., Okumoto, D.S. and Hanawalt, P.C. (1985) DNA repair in an active gene: removal of pyrimidine dimers from the DHFR gene of CHO cells is much more efficient than in the genome overall. Cell, 40, 359-369.
    • (1985) Cell , vol.40 , pp. 359-369
    • Bohr, V.A.1    Smith, C.A.2    Okumoto, D.S.3    Hanawalt, P.C.4
  • 14
    • 0027378279 scopus 로고
    • Unfolding of nucleosome cores dramatically changes the distribution of ultraviolet photoproducts in DNA
    • Brown, D.W., Libertini, L.J., Suquet, C., Small, E.W. and Smerdon, M.J. (1993) Unfolding of nucleosome cores dramatically changes the distribution of ultraviolet photoproducts in DNA. Biochemistry, 32, 10527-10531.
    • (1993) Biochemistry , vol.32 , pp. 10527-10531
    • Brown, D.W.1    Libertini, L.J.2    Suquet, C.3    Small, E.W.4    Smerdon, M.J.5
  • 15
    • 0027360535 scopus 로고
    • Multiple nucleosome positioning with unique rotational setting for the Saccharomyces cerevisiae 5S rRNA gene in vitro and in vivo
    • Buttinelli, M., DiMauro, E.D. and Negri, R. (1993) Multiple nucleosome positioning with unique rotational setting for the Saccharomyces cerevisiae 5S rRNA gene in vitro and in vivo. Proc. Natl Acad. Sci. USA, 90, 9315-9319.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 9315-9319
    • Buttinelli, M.1    DiMauro, E.D.2    Negri, R.3
  • 16
    • 0027485506 scopus 로고
    • Chromatin transitions during activation and repression of galactose-regulated genes in yeast
    • Cavalli, G. and Thoma, F. (1993) Chromatin transitions during activation and repression of galactose-regulated genes in yeast. EMBO J., 12, 4603-4613.
    • (1993) EMBO J. , vol.12 , pp. 4603-4613
    • Cavalli, G.1    Thoma, F.2
  • 17
    • 0030042250 scopus 로고    scopus 로고
    • Inactivation of topoisomerases affects transcription dependent chromatin transitions in rDNA but not in a gene transcribed by RNA polymerase II
    • Cavalli, G., Bachmann, D. and Thoma, F. (1996) Inactivation of topoisomerases affects transcription dependent chromatin transitions in rDNA but not in a gene transcribed by RNA polymerase II. EMBO J., 15, 590-597.
    • (1996) EMBO J. , vol.15 , pp. 590-597
    • Cavalli, G.1    Bachmann, D.2    Thoma, F.3
  • 18
    • 0027370604 scopus 로고
    • Lack of transcription-coupled repair in mammalian ribosomal RNA genes
    • Christians, F.C. and Hanawalt, P.C. (1993) Lack of transcription-coupled repair in mammalian ribosomal RNA genes. Biochemistry, 32, 10512-10518.
    • (1993) Biochemistry , vol.32 , pp. 10512-10518
    • Christians, F.C.1    Hanawalt, P.C.2
  • 19
    • 0020490305 scopus 로고
    • Determination of pyrimidine dimer unwinding angle by measurement of DNA electrophoretic mobility
    • Ciarrocchi, G. and Pedrini, A.M. (1982) Determination of pyrimidine dimer unwinding angle by measurement of DNA electrophoretic mobility. J. Mol. Biol., 155, 177-183.
    • (1982) J. Mol. Biol. , vol.155 , pp. 177-183
    • Ciarrocchi, G.1    Pedrini, A.M.2
  • 20
    • 0031834926 scopus 로고    scopus 로고
    • TATA binding protein discriminates between different lesions on DNA, resulting in a transcription decrease
    • Coin, F., Frit, P., Viollet, B., Salles, B. and Egly, J.M. (1998) TATA binding protein discriminates between different lesions on DNA, resulting in a transcription decrease. Mol. Cell. Biol., 18, 3907-3914.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 3907-3914
    • Coin, F.1    Frit, P.2    Viollet, B.3    Salles, B.4    Egly, J.M.5
  • 21
    • 0024392359 scopus 로고
    • Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle
    • Conconi, A., Widmer, R.M., Koller, T. and Sogo, J.M. (1989) Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle. Cell, 57, 753-761.
    • (1989) Cell , vol.57 , pp. 753-761
    • Conconi, A.1    Widmer, R.M.2    Koller, T.3    Sogo, J.M.4
  • 22
    • 0033105605 scopus 로고    scopus 로고
    • Tight correlation between inhibition of DNA repair in vitro and transcription factor IIIA binding in a 5S ribosomal RNA gene
    • Conconi, A., Liu, X., Koriazova, L., Ackerman, E.J. and Smerdon, M.J. (1999) Tight correlation between inhibition of DNA repair in vitro and transcription factor IIIA binding in a 5S ribosomal RNA gene. EMBO J., 18, 1387-1396.
    • (1999) EMBO J. , vol.18 , pp. 1387-1396
    • Conconi, A.1    Liu, X.2    Koriazova, L.3    Ackerman, E.J.4    Smerdon, M.J.5
  • 23
    • 0031014596 scopus 로고    scopus 로고
    • Lack of gene-and strand-specific DNA repair in RNA polymerase III-transcribed human tRNA genes
    • Dammann, R. and Pfeifer, G.P. (1997) Lack of gene-and strand-specific DNA repair in RNA polymerase III-transcribed human tRNA genes. Mol. Cell. Biol., 17, 219-229.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 219-229
    • Dammann, R.1    Pfeifer, G.P.2
  • 24
    • 0027270476 scopus 로고
    • Chromatin structures and transcription of rDNA in yeast Saccharomyces cerevisiae
    • Dammann, R., Lucchini, R., Koller, T. and Sogo, J.M. (1993) Chromatin structures and transcription of rDNA in yeast Saccharomyces cerevisiae. Nucleic Acids Res., 21, 2331-2338.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2331-2338
    • Dammann, R.1    Lucchini, R.2    Koller, T.3    Sogo, J.M.4
  • 25
    • 0026794271 scopus 로고
    • The transcribed template and the transcription loop in Balbiani rings
    • Daneholt, B. (1992) The transcribed template and the transcription loop in Balbiani rings. Cell Biol. Int. Rep., 16, 709-715.
    • (1992) Cell Biol. Int. Rep. , vol.16 , pp. 709-715
    • Daneholt, B.1
  • 27
    • 0022976416 scopus 로고
    • Structure of in vivo transcribing chromatin as studied in simian virus 40 minichromosomes
    • De Bernardin, W., Koller, T. and Sogo, J.M. (1986) Structure of in vivo transcribing chromatin as studied in simian virus 40 minichromosomes. J. Mol. Biol., 191, 469-482.
    • (1986) J. Mol. Biol. , vol.191 , pp. 469-482
    • De Bernardin, W.1    Koller, T.2    Sogo, J.M.3
  • 28
    • 0033118354 scopus 로고    scopus 로고
    • Molecular mechanism of nucleotide excision repair
    • de Laat, W.L., Jaspers, N.G. and Hoeijmakers, J.H. (1999) Molecular mechanism of nucleotide excision repair. Genes Dev., 13, 768-785.
    • (1999) Genes Dev. , vol.13 , pp. 768-785
    • De Laat, W.L.1    Jaspers, N.G.2    Hoeijmakers, J.H.3
  • 29
    • 0028106162 scopus 로고
    • Transcript cleavage by RNA polymerase II arrested by a cyclobutane pyrimidine dimer in the DNA template
    • Donahue, B.A., Yin, S., Taylor, J.S., Reines, D. and Hanawalt, P.C. (1994) Transcript cleavage by RNA polymerase II arrested by a cyclobutane pyrimidine dimer in the DNA template. Proc. Natl Acad. Sci. USA, 91, 8502-8506.
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 8502-8506
    • Donahue, B.A.1    Yin, S.2    Taylor, J.S.3    Reines, D.4    Hanawalt, P.C.5
  • 32
    • 0021256110 scopus 로고
    • Excision repair of pyrimidine dimers from simian virus 40 minichromosomes in vitro
    • Evans, D.H. and Linn, S. (1984) Excision repair of pyrimidine dimers from simian virus 40 minichromosomes in vitro. J. Biol. Chem., 259, 10252-10259.
    • (1984) J. Biol. Chem. , vol.259 , pp. 10252-10259
    • Evans, D.H.1    Linn, S.2
  • 33
    • 0030732132 scopus 로고    scopus 로고
    • Mechanism of open complex and dual incision formation by human nucleotide excision repair factors
    • Evans, E., Moggs, J.G., Hwang, J.R., Egly, J.M. and Wood, R.D. (1997) Mechanism of open complex and dual incision formation by human nucleotide excision repair factors. EMBO J., 16, 6559-6573.
    • (1997) EMBO J. , vol.16 , pp. 6559-6573
    • Evans, E.1    Moggs, J.G.2    Hwang, J.R.3    Egly, J.M.4    Wood, R.D.5
  • 35
    • 0032559424 scopus 로고    scopus 로고
    • Positioning and stability of nucleosomes on MMTV 3′ LTR sequences
    • Flaus, A. and Richmond, T.J. (1998) Positioning and stability of nucleosomes on MMTV 3′ LTR sequences. J. Mol. Biol., 275, 427-441.
    • (1998) J. Mol. Biol. , vol.275 , pp. 427-441
    • Flaus, A.1    Richmond, T.J.2
  • 36
    • 0027959686 scopus 로고
    • A novel role for DNA photolyase: Binding to DNA damaged by drugs is associated with enhanced cytotoxicity in Saccharomyces cerevisiae
    • Fox, M.E., Feldman, B.J. and Chu, G. (1994) A novel role for DNA photolyase: binding to DNA damaged by drugs is associated with enhanced cytotoxicity in Saccharomyces cerevisiae. Mol. Cell. Biol., 14, 8071-8077.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 8071-8077
    • Fox, M.E.1    Feldman, B.J.2    Chu, G.3
  • 37
    • 0030013201 scopus 로고    scopus 로고
    • Relationships between DNA repair and transcription
    • Friedberg, E.C. (1996) Relationships between DNA repair and transcription. Annu. Rev. Biochem., 65, 15-42.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 15-42
    • Friedberg, E.C.1
  • 39
    • 0028871666 scopus 로고
    • Repair of UV damage in actively transcribed ribosomal genes
    • Fritz, L.K. and Smerdon, M.J. (1995) Repair of UV damage in actively transcribed ribosomal genes. Biochemistry, 34, 13117-13124.
    • (1995) Biochemistry , vol.34 , pp. 13117-13124
    • Fritz, L.K.1    Smerdon, M.J.2
  • 40
    • 0030595338 scopus 로고    scopus 로고
    • Chromatin assembly coupled to DNA repair: A new role for chromatin assembly factor I
    • Gaillard, P.H., Martini, E.M., Kaufman, P.D., Stillman, B., Moustacchi, E. and Almouzni, G. (1996) Chromatin assembly coupled to DNA repair: a new role for chromatin assembly factor I. Cell. 86, 887-896.
    • (1996) Cell. , vol.86 , pp. 887-896
    • Gaillard, P.H.1    Martini, E.M.2    Kaufman, P.D.3    Stillman, B.4    Moustacchi, E.5    Almouzni, G.6
  • 41
    • 0030710190 scopus 로고    scopus 로고
    • Initiation and bidirectional propagation of chromatin assembly from a target site for nucleotide excision repair
    • Gaillard, P.H., Moggs, J.G., Roche, D.M., Quivy, J.P., Becker, P.B., Wood, R.D. and Almouzni, G. (1997) Initiation and bidirectional propagation of chromatin assembly from a target site for nucleotide excision repair. EMBO J., 16, 6281-6289.
    • (1997) EMBO J. , vol.16 , pp. 6281-6289
    • Gaillard, P.H.1    Moggs, J.G.2    Roche, D.M.3    Quivy, J.P.4    Becker, P.B.5    Wood, R.D.6    Almouzni, G.7
  • 42
    • 0025410310 scopus 로고
    • UV induced (6-4) photoproducts are distributed differently than cyclobutane dimers in nucleosomes
    • Gale, J.M. and Smerdon, M.J. (1990) UV induced (6-4) photoproducts are distributed differently than cyclobutane dimers in nucleosomes. Photochem. Photobiol., 51, 411-417.
    • (1990) Photochem. Photobiol. , vol.51 , pp. 411-417
    • Gale, J.M.1    Smerdon, M.J.2
  • 43
    • 0005001210 scopus 로고
    • UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases
    • Gale, J.M., Nissen, K.A. and Smerdon, M.J. (1987) UV-induced formation of pyrimidine dimers in nucleosome core DNA is strongly modulated with a period of 10.3 bases. Proc. Natl Acad. Sci. USA, 84, 6644-6648.
    • (1987) Proc. Natl Acad. Sci. USA , vol.84 , pp. 6644-6648
    • Gale, J.M.1    Nissen, K.A.2    Smerdon, M.J.3
  • 44
    • 0032912468 scopus 로고    scopus 로고
    • Role of Saccharomyces cerevisiae chromatin assembly factor-1 in repair of ultraviolet radiation damage in vivo
    • Game, J.C. and Kaufman, P.D. (1999) Role of Saccharomyces cerevisiae chromatin assembly factor-1 in repair of ultraviolet radiation damage in vivo. Genetics, 151, 485-497.
    • (1999) Genetics , vol.151 , pp. 485-497
    • Game, J.C.1    Kaufman, P.D.2
  • 45
    • 0023055749 scopus 로고
    • Processivity of T4 endonuclease V is sensitive to NaCl concentration
    • Ganesan, A.K., Seawell, P.C., Lewis, R.J. and Hanawalt, P.C. (1986) Processivity of T4 endonuclease V is sensitive to NaCl concentration. Biochemistry, 25, 5751-5755.
    • (1986) Biochemistry , vol.25 , pp. 5751-5755
    • Ganesan, A.K.1    Seawell, P.C.2    Lewis, R.J.3    Hanawalt, P.C.4
  • 46
    • 0019285806 scopus 로고
    • Comparison of the cleavage of pyrimidine dimers by the bacteriophage T4 and micrococcus luteus UV-specific endonucleases
    • Gordon, L.K. and Haseltine, W.A. (1980) Comparison of the cleavage of pyrimidine dimers by the bacteriophage T4 and Micrococcus luteus UV-specific endonucleases. J. Biol. Chem., 255, 12047-12050.
    • (1980) J. Biol. Chem. , vol.255 , pp. 12047-12050
    • Gordon, L.K.1    Haseltine, W.A.2
  • 47
    • 0032076121 scopus 로고    scopus 로고
    • Yeast heterochromatin: Regulation of its assembly and inheritance by histones
    • Grunstein, M. (1998) Yeast heterochromatin: regulation of its assembly and inheritance by histones. Cell, 93, 325-328.
    • (1998) Cell , vol.93 , pp. 325-328
    • Grunstein, M.1
  • 48
    • 0023002558 scopus 로고
    • The DNA scanning mechanism of T4 endonuclease V. Effect of NaCl concentration on processive nicking activity
    • Gruskin, E.A. and Lloyd, R.S. (1986) The DNA scanning mechanism of T4 endonuclease V. Effect of NaCl concentration on processive nicking activity. J. Biol. Chem., 261, 9607-9613.
    • (1986) J. Biol. Chem. , vol.261 , pp. 9607-9613
    • Gruskin, E.A.1    Lloyd, R.S.2
  • 49
    • 0027251932 scopus 로고
    • Yeast DNA-repair gene RAD14 encodes a zinc metalloprotein with affinity for ultraviolet-damaged DNA
    • Guzder, S.N., Sung, P., Prakash, L. and Prakash, S. (1993) Yeast DNA-repair gene RAD14 encodes a zinc metalloprotein with affinity for ultraviolet-damaged DNA. Proc. Natl Acad. Sci. USA, 90, 5433-5437.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 5433-5437
    • Guzder, S.N.1    Sung, P.2    Prakash, L.3    Prakash, S.4
  • 50
    • 0030856090 scopus 로고    scopus 로고
    • Yeast Rad7-Rad16 complex, specific for the nucleotide excision repair of the nontranscribed DNA strand, is an ATP-dependent DNA damage sensor
    • Guzder, S.N., Sung, P., Prakash, L. and Prakash, S. (1997) Yeast Rad7-Rad16 complex, specific for the nucleotide excision repair of the nontranscribed DNA strand, is an ATP-dependent DNA damage sensor. J. Biol. Chem., 272, 21665-21668.
    • (1997) J. Biol. Chem. , vol.272 , pp. 21665-21668
    • Guzder, S.N.1    Sung, P.2    Prakash, L.3    Prakash, S.4
  • 51
    • 0032553414 scopus 로고    scopus 로고
    • Affinity of yeast nucleotide excision repair factor 2, consisting of the Rad4 and Rad23 proteins, for ultraviolet damaged DNA
    • Guzder, S.N., Sung, P., Prakash, L. and Prakash, S. (1998a) Affinity of yeast nucleotide excision repair factor 2, consisting of the Rad4 and Rad23 proteins, for ultraviolet damaged DNA. J. Biol. Chem., 273, 31541-31546.
    • (1998) J. Biol. Chem. , vol.273 , pp. 31541-31546
    • Guzder, S.N.1    Sung, P.2    Prakash, L.3    Prakash, S.4
  • 52
    • 0032513237 scopus 로고    scopus 로고
    • The DNA-dependent ATPase activity of yeast nucleotide excision repair factor 4 and its role in DNA damage recognition
    • Guzder, S.N., Sung, P., Prakash, L. and Prakash, S. (1998b) The DNA-dependent ATPase activity of yeast nucleotide excision repair factor 4 and its role in DNA damage recognition. J. Biol. Chem., 273, 6292-6296.
    • (1998) J. Biol. Chem. , vol.273 , pp. 6292-6296
    • Guzder, S.N.1    Sung, P.2    Prakash, L.3    Prakash, S.4
  • 53
    • 0033588101 scopus 로고    scopus 로고
    • Synergistic interaction between yeast nucleotide excision repair factors NEF2 and NEF4 in the binding of ultraviolet-damaged DNA
    • Guzder, S.N., Sung, P., Prakash, L. and Prakash, S. (1999) Synergistic interaction between yeast nucleotide excision repair factors NEF2 and NEF4 in the binding of ultraviolet-damaged DNA. J. Biol. Chem., 274, 24257-24262.
    • (1999) J. Biol. Chem. , vol.274 , pp. 24257-24262
    • Guzder, S.N.1    Sung, P.2    Prakash, L.3    Prakash, S.4
  • 54
    • 0027179579 scopus 로고
    • Close-fitting sleeves - Recognition of structural defects in duplex DNA
    • Hanawalt, P.C. (1993) Close-fitting sleeves - recognition of structural defects in duplex DNA. Mutat. Res., 289, 7-15.
    • (1993) Mutat. Res. , vol.289 , pp. 7-15
    • Hanawalt, P.C.1
  • 55
    • 0028596398 scopus 로고
    • Transcription-coupled repair and human disease
    • Hanawalt, P.C. (1994) Transcription-coupled repair and human disease. Science, 266, 1957-1958.
    • (1994) Science , vol.266 , pp. 1957-1958
    • Hanawalt, P.C.1
  • 56
    • 0032565523 scopus 로고    scopus 로고
    • Genomic instability: Environmental invasion and the enemies within
    • Hanawalt, P.C. (1998) Genomic instability: environmental invasion and the enemies within. Mutat. Res., 400, 117-125.
    • (1998) Mutat. Res. , vol.400 , pp. 117-125
    • Hanawalt, P.C.1
  • 57
    • 0002225411 scopus 로고
    • Stranded in an active gene
    • Hanawalt, P. and Mellon, I. (1993) Stranded in an active gene. Curr. Biol., 3, 67-69.
    • (1993) Curr. Biol. , vol.3 , pp. 67-69
    • Hanawalt, P.1    Mellon, I.2
  • 58
    • 0026094357 scopus 로고
    • The histone core exerts a dominant constraint on the structure of DNA in a nucleosome
    • Hayes, J.J., Bashkin, J., Tullius, T.D. and Wolffe, A.P. (1991) The histone core exerts a dominant constraint on the structure of DNA in a nucleosome. Biochemistry, 30, 8434-8440.
    • (1991) Biochemistry , vol.30 , pp. 8434-8440
    • Hayes, J.J.1    Bashkin, J.2    Tullius, T.D.3    Wolffe, A.P.4
  • 59
    • 0027300148 scopus 로고
    • Processivity of uracil DNA glycosylase
    • Higley, M. and Lloyd, R.S. (1993) Processivity of uracil DNA glycosylase. Mutat. Res., 294, 109-116.
    • (1993) Mutat. Res. , vol.294 , pp. 109-116
    • Higley, M.1    Lloyd, R.S.2
  • 61
    • 0028242355 scopus 로고
    • Determination of minimum substrate size for human excinuclease
    • Huang, J.C. and Sancar, A. (1994) Determination of minimum substrate size for human excinuclease. J. Biol. Chem., 269, 19034-19040.
    • (1994) J. Biol. Chem. , vol.269 , pp. 19034-19040
    • Huang, J.C.1    Sancar, A.2
  • 62
    • 0032470510 scopus 로고    scopus 로고
    • Energy-dependent chromatin remodelers: Complex complexes and their components
    • Imbalzano, A.N. (1998) Energy-dependent chromatin remodelers: complex complexes and their components. Crit. Rev. Eukaryot. Gene Expr., 8, 225-255.
    • (1998) Crit. Rev. Eukaryot. Gene Expr. , vol.8 , pp. 225-255
    • Imbalzano, A.N.1
  • 63
    • 0025340988 scopus 로고
    • DNA repair within nucleosome cores of UV-irradiated human cells
    • Jensen, K.A. and Smerdon, M.J. (1990) DNA repair within nucleosome cores of UV-irradiated human cells. Biochemistry, 29, 4773-4782.
    • (1990) Biochemistry , vol.29 , pp. 4773-4782
    • Jensen, K.A.1    Smerdon, M.J.2
  • 64
    • 0027483739 scopus 로고
    • Preferential binding of the xeroderma-pigmentosum group - A complementing protein to damaged DNA
    • Jones, C.J. and Wood, R.D. (1993) Preferential binding of the xeroderma-pigmentosum group - a complementing protein to damaged DNA. Biochemistry, 32, 12096-12104.
    • (1993) Biochemistry , vol.32 , pp. 12096-12104
    • Jones, C.J.1    Wood, R.D.2
  • 65
    • 0031043134 scopus 로고    scopus 로고
    • Ultraviolet radiation sensitivity and reduction of telomeric silencing in Saccharomyces cerevisiae cells lacking chromatin assembly factor-I
    • Kaufman, P.D., Kobayashi, R. and Stillman, B. (1997) Ultraviolet radiation sensitivity and reduction of telomeric silencing in Saccharomyces cerevisiae cells lacking chromatin assembly factor-I. Genes Dev., 11, 345-357.
    • (1997) Genes Dev. , vol.11 , pp. 345-357
    • Kaufman, P.D.1    Kobayashi, R.2    Stillman, B.3
  • 66
    • 0029338999 scopus 로고
    • Contrasting structural impacts induced by cis-syn cyclobutane dimer and (6-4) adduct in DNA duplex decamers: Implication in mutagenesis and repair activity
    • Kim, J.K., Patel, D. and Choi, B.S. (1995) Contrasting structural impacts induced by cis-syn cyclobutane dimer and (6-4) adduct in DNA duplex decamers: implication in mutagenesis and repair activity. Photochem. Photobiol., 62, 44-50.
    • (1995) Photochem. Photobiol. , vol.62 , pp. 44-50
    • Kim, J.K.1    Patel, D.2    Choi, B.S.3
  • 67
    • 0033587610 scopus 로고    scopus 로고
    • Synthesis and nucleosome structure of DNA containing a UV photoproduct at a specific site
    • Kosmoski, J.V. and Smerdon, M.J. (1999) Synthesis and nucleosome structure of DNA containing a UV photoproduct at a specific site. Biochemistry, 38, 9485-9494.
    • (1999) Biochemistry , vol.38 , pp. 9485-9494
    • Kosmoski, J.V.1    Smerdon, M.J.2
  • 68
    • 0026440707 scopus 로고
    • Strand-selective repair of DNA damage in the yeast GAL7 gene requires RNA polymerase II
    • Leadon, S.A. and Lawrence, D.A. (1992) Strand-selective repair of DNA damage in the yeast GAL7 gene requires RNA polymerase II. J. Biol. Chem., 267, 23175-23182.
    • (1992) J. Biol. Chem. , vol.267 , pp. 23175-23182
    • Leadon, S.A.1    Lawrence, D.A.2
  • 69
    • 0032484098 scopus 로고    scopus 로고
    • Requirement of RSF and FACT for transcription of chromatin templates in vitro
    • LeRoy, G., Orphanides, G., Lane, W.S. and Reinberg, D. (1998) Requirement of RSF and FACT for transcription of chromatin templates in vitro. Science, 282, 1900-1904.
    • (1998) Science , vol.282 , pp. 1900-1904
    • LeRoy, G.1    Orphanides, G.2    Lane, W.S.3    Reinberg, D.4
  • 70
    • 0033617284 scopus 로고    scopus 로고
    • Base excision repair of N-methylpurines in a yeast minichromosome
    • Li, S. and Smerdon, M.J. (1999) Base excision repair of N-methylpurines in a yeast minichromosome. J. Biol. Chem., 274, 12201-12204.
    • (1999) J. Biol. Chem. , vol.274 , pp. 12201-12204
    • Li, S.1    Smerdon, M.J.2
  • 71
    • 0033199871 scopus 로고    scopus 로고
    • Nucleotide excision repair in a constitutive and inducible gene of a yeast minichromosome in intact cells
    • Li, S., Livingstone-Zatchej, M., Gupta, R., Meijer, M., Thoma, F. and Smerdon, M.J. (1999) Nucleotide excision repair in a constitutive and inducible gene of a yeast minichromosome in intact cells. Nucleic Acids Res., 27, 3610-3620.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 3610-3620
    • Li, S.1    Livingstone-Zatchej, M.2    Gupta, R.3    Meijer, M.4    Thoma, F.5    Smerdon, M.J.6
  • 72
    • 0030815234 scopus 로고    scopus 로고
    • Strand-specific modulation of UV photoproducts in 5S rDNA by TFIIIA binding and their effect on TFIIIA complex formation
    • Liu, X., Conconi, A. and Smerdon, M.J. (1997) Strand-specific modulation of UV photoproducts in 5S rDNA by TFIIIA binding and their effect on TFIIIA complex formation. Biochemistry, 36, 13710-13717.
    • (1997) Biochemistry , vol.36 , pp. 13710-13717
    • Liu, X.1    Conconi, A.2    Smerdon, M.J.3
  • 73
    • 0030964608 scopus 로고    scopus 로고
    • RNA polymerase II transcription inhibits DNA repair by photolyase in the transcribed strand of active yeast genes
    • Livingstone-Zatchej, M., Meier, A., Suter, B. and Thoma, F. (1997) RNA polymerase II transcription inhibits DNA repair by photolyase in the transcribed strand of active yeast genes. Nucleic Acids Res., 25, 3795-3800.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 3795-3800
    • Livingstone-Zatchej, M.1    Meier, A.2    Suter, B.3    Thoma, F.4
  • 74
    • 0033288920 scopus 로고    scopus 로고
    • Photolyase: A molecular tool to characterize chromatin structure in yeast
    • Livingstone-Zatchej, M., Suter, B. and Thoma, F. (1999) Photolyase: a molecular tool to characterize chromatin structure in yeast. Methods Mol. Biol., 119, 245-259.
    • (1999) Methods Mol. Biol. , vol.119 , pp. 245-259
    • Livingstone-Zatchej, M.1    Suter, B.2    Thoma, F.3
  • 75
    • 0025194240 scopus 로고
    • Poly(dA)·poly(dT) rich sequences are not sufficient to exclude nucleosome formation in a constitutive yeast promoter
    • Losa, R., Omari, S. and Thoma, F. (1990) Poly(dA)·poly(dT) rich sequences are not sufficient to exclude nucleosome formation in a constitutive yeast promoter. Nucleic Acids Res., 18, 3495-3502.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 3495-3502
    • Losa, R.1    Omari, S.2    Thoma, F.3
  • 76
    • 1842411320 scopus 로고    scopus 로고
    • Crystal structure of the nucleosome core particle at 2.8 Å resolution
    • Luger, K., Mader, A.W., Richmond, R.K., Sargent, D.F. and Richmond, T.J. (1997) Crystal structure of the nucleosome core particle at 2.8 Å resolution. Nature, 389, 251-260.
    • (1997) Nature , vol.389 , pp. 251-260
    • Luger, K.1    Mader, A.W.2    Richmond, R.K.3    Sargent, D.F.4    Richmond, T.J.5
  • 77
    • 0018311433 scopus 로고
    • Precise location of DNase i cutting sites in the nucleosome core determined by high resolution gel electrophoresis
    • Lutter, L.C. (1979) Precise location of DNase I cutting sites in the nucleosome core determined by high resolution gel electrophoresis. Nucleic Acids Res., 6, 41-55.
    • (1979) Nucleic Acids Res. , vol.6 , pp. 41-55
    • Lutter, L.C.1
  • 78
    • 0025834658 scopus 로고
    • Unusual conformation of (dA)n·(dT)n-tracts as revealed by cyclobutane thymine-thymine dimer formation
    • Lyamichev, V. (1991) Unusual conformation of (dA)n·(dT)n-tracts as revealed by cyclobutane thymine-thymine dimer formation. Nucleic Acids Res., 19, 4491-4496.
    • (1991) Nucleic Acids Res. , vol.19 , pp. 4491-4496
    • Lyamichev, V.1
  • 79
    • 0030960760 scopus 로고    scopus 로고
    • DNA damage can alter the stability of nucleosomes: Effects are dependent on damage type
    • Mann, D.B., Springer, D.L. and Smerdon, M.J. (1997) DNA damage can alter the stability of nucleosomes: effects are dependent on damage type. Proc. Natl Acad. Sci. USA, 94, 2215-2220.
    • (1997) Proc. Natl Acad. Sci. USA , vol.94 , pp. 2215-2220
    • Mann, D.B.1    Springer, D.L.2    Smerdon, M.J.3
  • 80
    • 0028486225 scopus 로고
    • The effects of ultraviolet C on in vitro nucleosome assembly and stability
    • Matsumoto, H., Takakusu, A. and Ohnishi, T. (1994) The effects of ultraviolet C on in vitro nucleosome assembly and stability. Photochem. Photobiol., 60, 134-138.
    • (1994) Photochem. Photobiol. , vol.60 , pp. 134-138
    • Matsumoto, H.1    Takakusu, A.2    Ohnishi, T.3
  • 81
    • 0029302106 scopus 로고
    • Preferential inhibition of nucleosome assembly by ultraviolet-induced (6-4) photoproducts
    • Matsumoto, H., Takakusu, A., Mori, T., Ihara, M., Todo, T. and Ohnishi, T. (1995) Preferential inhibition of nucleosome assembly by ultraviolet-induced (6-4) photoproducts. Photochem. Photobiol., 61, 459-462.
    • (1995) Photochem. Photobiol. , vol.61 , pp. 459-462
    • Matsumoto, H.1    Takakusu, A.2    Mori, T.3    Ihara, M.4    Todo, T.5    Ohnishi, T.6
  • 82
    • 0017674014 scopus 로고
    • Electron microscopic analysis of chromosome metabolism in the Drosophila melanogaster embryo
    • McKnight, S.L., Bustin, M. and Miller, O.L.,Jr (1978) Electron microscopic analysis of chromosome metabolism in the Drosophila melanogaster embryo. Cold Spring Harbor Symp. Quant. Biol., 42, 741-754.
    • (1978) Cold Spring Harbor Symp. Quant. Biol. , vol.42 , pp. 741-754
    • McKnight, S.L.1    Bustin, M.2    Miller O.L., Jr.3
  • 83
    • 0033166063 scopus 로고    scopus 로고
    • Accessing DNA damage in chromatin: Insights from transcription
    • Meijer, M. and Smerdon, M.J. (1999) Accessing DNA damage in chromatin: insights from transcription. BioEssays, 21, 596-603.
    • (1999) BioEssays , vol.21 , pp. 596-603
    • Meijer, M.1    Smerdon, M.J.2
  • 84
    • 0024426244 scopus 로고
    • Induction of the Escherichia coli lactose operon selectively increases repairof its transcribed DNA strand
    • Mellon, I. and Hanawalt, P.C. (1989) Induction of the Escherichia coli lactose operon selectively increases repairof its transcribed DNA strand. Nature, 342, 95-98.
    • (1989) Nature , vol.342 , pp. 95-98
    • Mellon, I.1    Hanawalt, P.C.2
  • 85
    • 0023663101 scopus 로고
    • Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene
    • Mellon, I., Spivak, G. and Hanawalt, P.C. (1987) Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene. Cell, 51, 241-249.
    • (1987) Cell , vol.51 , pp. 241-249
    • Mellon, I.1    Spivak, G.2    Hanawalt, P.C.3
  • 86
    • 0022256062 scopus 로고
    • (6-4) Photoproducts are removed from the DNA of UV-irradiated mammalian cells more efficiently than cyclobutane pyrimidine dimers
    • Mitchell, D.L., Haipek, C.A. and Clarkson, J.M. (1985) (6-4) Photoproducts are removed from the DNA of UV-irradiated mammalian cells more efficiently than cyclobutane pyrimidine dimers. Mutat. Res., 143, 109-112.
    • (1985) Mutat. Res. , vol.143 , pp. 109-112
    • Mitchell, D.L.1    Haipek, C.A.2    Clarkson, J.M.3
  • 87
    • 0025248628 scopus 로고
    • Nonrandom induction of pyrimidine-pyrimidone (6-4) photoproducts in ultraviolet-irradiated human chromatin
    • Mitchell, D.L., Nguyen, T.D. and Cleaver, J.E. (1990) Nonrandom induction of pyrimidine-pyrimidone (6-4) photoproducts in ultraviolet-irradiated human chromatin. J. Biol. Chem., 265, 5353-5356.
    • (1990) J. Biol. Chem. , vol.265 , pp. 5353-5356
    • Mitchell, D.L.1    Nguyen, T.D.2    Cleaver, J.E.3
  • 88
    • 0032740449 scopus 로고    scopus 로고
    • Chromatin rearrangements during nucleotide excision repair
    • Moggs, J.G. and Almouzni, G. (1999) Chromatin rearrangements during nucleotide excision repair. Biochimie, 81, 45-52.
    • (1999) Biochimie , vol.81 , pp. 45-52
    • Moggs, J.G.1    Almouzni, G.2
  • 90
    • 0029026826 scopus 로고
    • Repair of plasmid and genomic DNA in a rad7Δ mutant of yeast
    • Mueller, J.P. and Smerdon, M.J. (1995) Repair of plasmid and genomic DNA in a rad7Δ mutant of yeast. Nucleic Acids Res., 23, 3457-3464.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 3457-3464
    • Mueller, J.P.1    Smerdon, M.J.2
  • 92
    • 0026536763 scopus 로고
    • The DNA helicase and adenosine triphosphatase activities of yeast Rad3 protein are inhibited by DNA damage - A potential mechanism for damage-specific recognition
    • Naegeli, H., Bardwell, L. and Friedberg, E.C. (1992) The DNA helicase and adenosine triphosphatase activities of yeast Rad3 protein are inhibited by DNA damage - a potential mechanism for damage-specific recognition. J. Biol. Chem., 267, 392-398.
    • (1992) J. Biol. Chem. , vol.267 , pp. 392-398
    • Naegeli, H.1    Bardwell, L.2    Friedberg, E.C.3
  • 93
    • 0020482049 scopus 로고
    • Nucleosomal distribution of thymine photodimers following far-and near-ultraviolet irradiation
    • Niggli, H.J. and Cerutti, P.A. (1982) Nucleosomal distribution of thymine photodimers following far-and near-ultraviolet irradiation. Biochem. Biophys. Res. Commun., 105, 1215-1223.
    • (1982) Biochem. Biophys. Res. Commun. , vol.105 , pp. 1215-1223
    • Niggli, H.J.1    Cerutti, P.A.2
  • 94
    • 0028820253 scopus 로고
    • The other function of DNA photolyase: Stimulation of excision repair of chemical damage to DNA
    • Ozer, Z., Reardon, J.T., Hsu, D.S., Malhotra, K. and Sancar, A. (1995) The other function of DNA photolyase: stimulation of excision repair of chemical damage to DNA. Biochemistry, 34, 15886-15889.
    • (1995) Biochemistry , vol.34 , pp. 15886-15889
    • Ozer, Z.1    Reardon, J.T.2    Hsu, D.S.3    Malhotra, K.4    Sancar, A.5
  • 95
    • 0028109333 scopus 로고
    • Interaction of the yeast RAD7 and SIR3 proteins: Implications for DNA repair and chromatin structure
    • Paetkau, D.W., Riese, J.A., Macmorran, W.S., Woods, R.A. and Gietz, R.D. (1994) Interaction of the yeast RAD7 and SIR3 proteins: implications for DNA repair and chromatin structure. Genes Dev., 8, 2035-2045.
    • (1994) Genes Dev. , vol.8 , pp. 2035-2045
    • Paetkau, D.W.1    Riese, J.A.2    Macmorran, W.S.3    Woods, R.A.4    Gietz, R.D.5
  • 96
    • 0028812143 scopus 로고
    • Crystal structure of DNA photolyase from Escherichia coli
    • Park, H.W., Kim, S.T., Sancar, A. and Deisenhofer, J. (1995) Crystal structure of DNA photolyase from Escherichia coli. Science, 268, 1866-1872.
    • (1995) Science , vol.268 , pp. 1866-1872
    • Park, H.W.1    Kim, S.T.2    Sancar, A.3    Deisenhofer, J.4
  • 97
    • 0024380891 scopus 로고
    • Thymine dimer formation as a probe of the path of DNA in and between nucleosomes in intact chromatin
    • Pehrson, J.R. (1989) Thymine dimer formation as a probe of the path of DNA in and between nucleosomes in intact chromatin. Proc. Natl Acad. Sci. USA, 86, 9149-9153.
    • (1989) Proc. Natl Acad. Sci. USA , vol.86 , pp. 9149-9153
    • Pehrson, J.R.1
  • 98
    • 0029115144 scopus 로고
    • Probing the conformation of nucleosome linker DNA in situ with pyrimidine dimer formation
    • Pehrson, J.R. (1995) Probing the conformation of nucleosome linker DNA in situ with pyrimidine dimer formation. J. Biol. Chem., 270, 22440-22444.
    • (1995) J. Biol. Chem. , vol.270 , pp. 22440-22444
    • Pehrson, J.R.1
  • 99
    • 0026577472 scopus 로고
    • Effects of DNA looping on pyrimidine dimer formation
    • Pehrson, J.R. and Cohen, L.H. (1992) Effects of DNA looping on pyrimidine dimer formation. Nucleic Acids Res., 20, 1321-1324.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 1321-1324
    • Pehrson, J.R.1    Cohen, L.H.2
  • 100
    • 0021078048 scopus 로고
    • A model of the kinetics of photorepair in chick embryo fibroblasts
    • Pendrys, J.P. (1983) A model of the kinetics of photorepair in chick embryo fibroblasts. Mutat. Res., 122, 129-133.
    • (1983) Mutat. Res. , vol.122 , pp. 129-133
    • Pendrys, J.P.1
  • 101
    • 0025887821 scopus 로고
    • Mobility of positioned nucleosomes on 5S rDNA
    • Pennings, S., Meersseman, G. and Bradbury, E.M. (1991) Mobility of positioned nucleosomes on 5S rDNA. J. Mol. Biol., 220, 101-110.
    • (1991) J. Mol. Biol. , vol.220 , pp. 101-110
    • Pennings, S.1    Meersseman, G.2    Bradbury, E.M.3
  • 102
    • 0028130301 scopus 로고
    • Linker histones H1 and H5 prevent the mobility of positioned nucleosomes
    • Pennings, S., Meersseman, G. and Bradbury, E.M. (1994) Linker histones H1 and H5 prevent the mobility of positioned nucleosomes. Proc. Natl Acad. Sci. USA, 91, 10275-10279.
    • (1994) Proc. Natl Acad. Sci. USA , vol.91 , pp. 10275-10279
    • Pennings, S.1    Meersseman, G.2    Bradbury, E.M.3
  • 103
    • 0026566518 scopus 로고
    • Binding of transcription factors creates hot spots for UV photoproducts in vivo
    • Pfeifer, G.P., Drouin, R., Riggs, A.D. and Holmquist, G.P. (1992) Binding of transcription factors creates hot spots for UV photoproducts in vivo. Mol. Cell. Biol., 12, 1798-1804.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 1798-1804
    • Pfeifer, G.P.1    Drouin, R.2    Riggs, A.D.3    Holmquist, G.P.4
  • 104
    • 0025787384 scopus 로고
    • Yeast nucleosomal particles: Structural and transcriptional properties
    • Pineiro, M., Puerta, C. and Palacian, E. (1991) Yeast nucleosomal particles: structural and transcriptional properties. Biochemistry, 30, 5805-5810.
    • (1991) Biochemistry , vol.30 , pp. 5805-5810
    • Pineiro, M.1    Puerta, C.2    Palacian, E.3
  • 105
    • 0024918830 scopus 로고
    • Induction of a novel damage-specific DNA binding protein correlates with enhanced DNA repair in primate cells
    • Protic, M., Hirschfeld, S., Tsang, A.P, Wagner, M., Dixon, K. and Levine, A.S. (1989) Induction of a novel damage-specific DNA binding protein correlates with enhanced DNA repair in primate cells. Mol. Toxicol., 2, 255-270.
    • (1989) Mol. Toxicol. , vol.2 , pp. 255-270
    • Protic, M.1    Hirschfeld, S.2    Tsang, A.P.3    Wagner, M.4    Dixon, K.5    Levine, A.S.6
  • 106
    • 0029022696 scopus 로고
    • Unwinding of chromatin by the SV40 large T antigen DNA helicase
    • Ramsperger, U. and Stahl, H. (1995) Unwinding of chromatin by the SV40 large T antigen DNA helicase. EMBO J., 14, 3215-3225.
    • (1995) EMBO J. , vol.14 , pp. 3215-3225
    • Ramsperger, U.1    Stahl, H.2
  • 107
    • 0031814129 scopus 로고    scopus 로고
    • Relationship of the xeroderma pigmentosum group E DNA repair defect to the chromatin and DNA binding proteins UV-DDB and replication protein A
    • Rapic Otrin, V., Kuraoka, I., Nardo, T., McLenigan, M., Eker, A.P., Stefanini, M., Levine, A.S. and Wood, R.D. (1998) Relationship of the xeroderma pigmentosum group E DNA repair defect to the chromatin and DNA binding proteins UV-DDB and replication protein A. Mol. Cell. Biol., 18, 3182-3190.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 3182-3190
    • Rapic Otrin, V.1    Kuraoka, I.2    Nardo, T.3    McLenigan, M.4    Eker, A.P.5    Stefanini, M.6    Levine, A.S.7    Wood, R.D.8
  • 108
    • 0026076553 scopus 로고
    • Complementation of DNA repair in xeroderma pigmentosum group A cell extracts by a protein with affinity for damaged DNA
    • Robins, P., Jones, C.J., Biggerstaff, M., Lindahl, T. and Wood, R.D. (1991) Complementation of DNA repair in xeroderma pigmentosum group A cell extracts by a protein with affinity for damaged DNA. EMBO J., 10, 3913-3921.
    • (1991) EMBO J. , vol.10 , pp. 3913-3921
    • Robins, P.1    Jones, C.J.2    Biggerstaff, M.3    Lindahl, T.4    Wood, R.D.5
  • 109
    • 0028914934 scopus 로고
    • In vivo protein-DNA interactions at the c-jun promoter in quiescent and serum-stimulated fibroblasts
    • Rozek, D. and Pfeifer, G.P. (1995) In vivo protein-DNA interactions at the c-jun promoter in quiescent and serum-stimulated fibroblasts. J. Cell. Biochem., 57, 479-487.
    • (1995) J. Cell. Biochem. , vol.57 , pp. 479-487
    • Rozek, D.1    Pfeifer, G.P.2
  • 110
    • 0029892790 scopus 로고    scopus 로고
    • DNA excision repair
    • Sancar, A. (1996a) DNA excision repair. Annu. Rev. Biochem., 65, 43-81.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 43-81
    • Sancar, A.1
  • 111
    • 0029874444 scopus 로고    scopus 로고
    • No 'end of history' for photolyases
    • Sancar, A. (1996b) No 'end of history' for photolyases. Science, 272, 48-49.
    • (1996) Science , vol.272 , pp. 48-49
    • Sancar, A.1
  • 112
    • 0024325453 scopus 로고
    • Interactions between yeast photolyase and nucleotide excision repair proteins in Saccharomyces cerevisiae and Escherichia coli
    • Sancar, G.B. and Smith, F.W. (1989) Interactions between yeast photolyase and nucleotide excision repair proteins in Saccharomyces cerevisiae and Escherichia coli. Mol. Cell. Biol., 9, 4767-4776.
    • (1989) Mol. Cell. Biol. , vol.9 , pp. 4767-4776
    • Sancar, G.B.1    Smith, F.W.2
  • 113
    • 0023094452 scopus 로고
    • Action mechanism of Escherichia coli DNA photolyase. I. Formation of the enzyme-substrate complex
    • Sancar, G.B., Smith, F.W., Reid, R., Payne, G., Levy, M. and Sancar, A. (1987) Action mechanism of Escherichia coli DNA photolyase. I. Formation of the enzyme-substrate complex. J. Biol. Chem., 262, 478-485.
    • (1987) J. Biol. Chem. , vol.262 , pp. 478-485
    • Sancar, G.B.1    Smith, F.W.2    Reid, R.3    Payne, G.4    Levy, M.5    Sancar, A.6
  • 115
    • 0029939655 scopus 로고    scopus 로고
    • Modulation of cyclobutane pyrimidine dimer formation in a positioned nucleosome containing poly(dA·dT) tracts
    • Schieferstein, U. and Thoma, F. (1996) Modulation of cyclobutane pyrimidine dimer formation in a positioned nucleosome containing poly(dA·dT) tracts. Biochemistry, 35, 7705-7714.
    • (1996) Biochemistry , vol.35 , pp. 7705-7714
    • Schieferstein, U.1    Thoma, F.2
  • 116
    • 0032472378 scopus 로고    scopus 로고
    • Site-specific repair of cyclobutane pyrimidine dimers in a positioned nucleosome by photolyase and T4 endonuclease V in vitro
    • Schieferstein, U. and Thoma, F. (1998) Site-specific repair of cyclobutane pyrimidine dimers in a positioned nucleosome by photolyase and T4 endonuclease V in vitro. EMBO J., 17, 306-316.
    • (1998) EMBO J. , vol.17 , pp. 306-316
    • Schieferstein, U.1    Thoma, F.2
  • 117
    • 0026580654 scopus 로고
    • Identification of RAD16, a yeast excision repair gene homologous to the recombinational repair gene RAD54 and to the SNF2 gene involved in transcriptional activation
    • Schild, D., Glassner, B.J., Mortimer, R.K., Carlson, M. and Laurent, B.C. (1992) Identification of RAD16, a yeast excision repair gene homologous to the recombinational repair gene RAD54 and to the SNF2 gene involved in transcriptional activation. Yeast, 8, 385-395.
    • (1992) Yeast , vol.8 , pp. 385-395
    • Schild, D.1    Glassner, B.J.2    Mortimer, R.K.3    Carlson, M.4    Laurent, B.C.5
  • 118
    • 0026465372 scopus 로고
    • Nucleosome disruption at the yeast PHO5 promoter upon PHO5 induction occurs in the absence of DNA replication
    • Schmid, A., Fascher, K.D. and Horz, W. (1992) Nucleosome disruption at the yeast PHO5 promoter upon PHO5 induction occurs in the absence of DNA replication. Cell, 71, 853-864.
    • (1992) Cell , vol.71 , pp. 853-864
    • Schmid, A.1    Fascher, K.D.2    Horz, W.3
  • 119
    • 0025610725 scopus 로고
    • Transcription preferentially inhibits nucleotide excision repair of the template DNA strand in vitro
    • Selby, C.P. and Sancar, A. (1990) Transcription preferentially inhibits nucleotide excision repair of the template DNA strand in vitro. J. Biol. Chem., 265, 21330-21336.
    • (1990) J. Biol. Chem. , vol.265 , pp. 21330-21336
    • Selby, C.P.1    Sancar, A.2
  • 120
    • 0030804783 scopus 로고    scopus 로고
    • RNA polymerase II stalled at a thymine dimer: Footprint and effect on excision repair
    • Selby, C.P., Drapkin, R., Reinberg, D. and Sancar, A. (1997) RNA polymerase II stalled at a thymine dimer: footprint and effect on excision repair. Nucleic Acids Res., 25, 787-793.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 787-793
    • Selby, C.P.1    Drapkin, R.2    Reinberg, D.3    Sancar, A.4
  • 121
    • 0023135193 scopus 로고
    • Photofootprinting in vivo detects transcription-dependent changes in yeast TATA boxes
    • Selleck, S.B. and Majors, J. (1987a) Photofootprinting in vivo detects transcription-dependent changes in yeast TATA boxes. Nature, 325, 173-177.
    • (1987) Nature , vol.325 , pp. 173-177
    • Selleck, S.B.1    Majors, J.2
  • 122
    • 0023408657 scopus 로고
    • In vivo DNA-binding properties of a yeast transcription activator protein
    • Selleck, S.B. and Majors, J.E. (1987b) In vivo DNA-binding properties of a yeast transcription activator protein. Mol. Cell. Biol., 7, 3260-3267.
    • (1987) Mol. Cell. Biol. , vol.7 , pp. 3260-3267
    • Selleck, S.B.1    Majors, J.E.2
  • 123
    • 0024058281 scopus 로고
    • In vivo 'photofootprint' changes at sequences between the yeast GAL1 upstream activating sequence and 'TATA' element require activated GAL4 protein but not a functional TATA element
    • Selleck, S.B. and Majors, J. (1988) In vivo 'photofootprint' changes at sequences between the yeast GAL1 upstream activating sequence and 'TATA' element require activated GAL4 protein but not a functional TATA element. Proc. Natl Acad. Sci. USA, 85, 5399-5403.
    • (1988) Proc. Natl Acad. Sci. Usa , vol.85 , pp. 5399-5403
    • Selleck, S.B.1    Majors, J.2
  • 124
    • 0018266771 scopus 로고
    • Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones
    • Simpson, R.T. (1978) Structure of the chromatosome, a chromatin particle containing 160 base pairs of DNA and all the histones. Biochemistry, 17, 5524-5531.
    • (1978) Biochemistry , vol.17 , pp. 5524-5531
    • Simpson, R.T.1
  • 125
  • 126
    • 0018125018 scopus 로고
    • Nucleosome rearrangement in human chromatin during UV-induced DNA-repair synthesis
    • Smerdon, M.J. and Lieberman, M.W. (1978) Nucleosome rearrangement in human chromatin during UV-induced DNA-repair synthesis. Proc. Natl Acad. Sci. USA, 75, 4238-4241.
    • (1978) Proc. Natl Acad. Sci. USA , vol.75 , pp. 4238-4241
    • Smerdon, M.J.1    Lieberman, M.W.2
  • 127
    • 0019132228 scopus 로고
    • Distribution within chromatin of deoxyribonucleic acid repair synthesis occurring at different times after ultraviolet radiation
    • Smerdon, M.J. and Lieberman, M.W. (1980) Distribution within chromatin of deoxyribonucleic acid repair synthesis occurring at different times after ultraviolet radiation. Biochemistry, 19, 2992-3000.
    • (1980) Biochemistry , vol.19 , pp. 2992-3000
    • Smerdon, M.J.1    Lieberman, M.W.2
  • 128
    • 0025316080 scopus 로고
    • Site-specific DNA repair at the nucleosome level in a yeast minichromosome
    • Smerdon, M.J. and Thoma, F. (1990) Site-specific DNA repair at the nucleosome level in a yeast minichromosome. Cell, 61, 675-684.
    • (1990) Cell , vol.61 , pp. 675-684
    • Smerdon, M.J.1    Thoma, F.2
  • 129
    • 0000529931 scopus 로고    scopus 로고
    • Modulations in chromatin structure during DNA damage formation and DNA repair
    • Hoekstra, M.F. and Nickoloff, J.A. (eds), The Humana Press Inc., Totowa, NJ
    • Smerdon, M. and Thoma, F. (1998) Modulations in chromatin structure during DNA damage formation and DNA repair. In Hoekstra, M.F. and Nickoloff, J.A. (eds), DNA Damage and Repair: Molecular and Cell Biology. The Humana Press Inc., Totowa, NJ, Vol. 2, pp. 199-222.
    • (1998) DNA Damage and Repair: Molecular and Cell Biology , vol.2 , pp. 199-222
    • Smerdon, M.1    Thoma, F.2
  • 130
    • 0020356008 scopus 로고
    • Sodium butyrate stimulates DNA repair in UV-irradiated normal and xeroderma pigmentosum human fibroblasts
    • Smerdon, M.J., Lan, S.Y., Calza, R.E. and Reeves, R. (1982) Sodium butyrate stimulates DNA repair in UV-irradiated normal and xeroderma pigmentosum human fibroblasts. J. Biol. Chem., 257, 13441-13447.
    • (1982) J. Biol. Chem. , vol.257 , pp. 13441-13447
    • Smerdon, M.J.1    Lan, S.Y.2    Calza, R.E.3    Reeves, R.4
  • 131
    • 0025316651 scopus 로고
    • DNA repair in a small yeast plasmid folded into chromatin
    • Smerdon, M.J., Bedoyan, J. and Thoma, F. (1990) DNA repair in a small yeast plasmid folded into chromatin. Nucleic Acids Res., 18, 2045-2051.
    • (1990) Nucleic Acids Res. , vol.18 , pp. 2045-2051
    • Smerdon, M.J.1    Bedoyan, J.2    Thoma, F.3
  • 132
    • 0028850059 scopus 로고
    • Overcoming a nucleosomal barrier to transcription
    • Studitsky, V.M., Clark, D.J. and Felsenfeld, G. (1995) Overcoming a nucleosomal barrier to transcription. Cell, 83, 19-27.
    • (1995) Cell , vol.83 , pp. 19-27
    • Studitsky, V.M.1    Clark, D.J.2    Felsenfeld, G.3
  • 133
    • 0031451329 scopus 로고    scopus 로고
    • Mechanism of transcription through the nucleosome by eukaryotic RNA polymerase
    • Studitsky, V.M., Kassavetis, G.A., Geiduschek, E.P. and Felsenfeld, G. (1997) Mechanism of transcription through the nucleosome by eukaryotic RNA polymerase. Science, 278, 1960-1963.
    • (1997) Science , vol.278 , pp. 1960-1963
    • Studitsky, V.M.1    Kassavetis, G.A.2    Geiduschek, E.P.3    Felsenfeld, G.4
  • 134
    • 0027463258 scopus 로고
    • Cell-free repair of UV-damaged simian virus-40 chromosomes in human cell extracts. 1. Development of a cell-free system detecting excision repair of UV-irradiated SV40 chromosomes
    • Sugasawa, K., Masutani, C and Hanaoka, F. (1993) Cell-free repair of UV-damaged simian virus-40 chromosomes in human cell extracts. 1. Development of a cell-free system detecting excision repair of UV-irradiated SV40 chromosomes. J. Biol. Chem., 268, 9098-9104.
    • (1993) J. Biol. Chem. , vol.268 , pp. 9098-9104
    • Sugasawa, K.1    Masutani, C.2    Hanaoka, F.3
  • 136
    • 0029014790 scopus 로고
    • Repair of UV-induced (6-4) photoproducts in nucleosome core DNA
    • Suquet, C., Mitchell, D.L. and Smerdon, M.J. (1995) Repair of UV-induced (6-4) photoproducts in nucleosome core DNA. J. Biol. Chem., 270, 16507-16509.
    • (1995) J. Biol. Chem. , vol.270 , pp. 16507-16509
    • Suquet, C.1    Mitchell, D.L.2    Smerdon, M.J.3
  • 137
    • 0027484148 scopus 로고
    • UV damage to DNA strongly influences its rotational setting on the histone surface of reconstituted nucleosomes
    • Suquet, C. and Smerdon, M.J. (1993) UV damage to DNA strongly influences its rotational setting on the histone surface of reconstituted nucleosomes. J. Biol. Chem., 268, 23755-23757.
    • (1993) J. Biol. Chem. , vol.268 , pp. 23755-23757
    • Suquet, C.1    Smerdon, M.J.2
  • 138
    • 0030941116 scopus 로고    scopus 로고
    • Chromatin structure modulates DNA repair by photolyase in vivo
    • Suter, B., Livingstone-Zatchej, M. and Thoma, F. (1997) Chromatin structure modulates DNA repair by photolyase in vivo. EMBO J., 16, 2150-2160.
    • (1997) EMBO J. , vol.16 , pp. 2150-2160
    • Suter, B.1    Livingstone-Zatchej, M.2    Thoma, F.3
  • 139
    • 0033000673 scopus 로고    scopus 로고
    • Mapping cyclobutane-pyrimidine dimers in DNA and using DNA-repair by photolyase for chromatin analysis in yeast
    • Suter, B., Livingstone-Zatchej, M. and Thoma, F. (1999) Mapping cyclobutane-pyrimidine dimers in DNA and using DNA-repair by photolyase for chromatin analysis in yeast. Methods Enzymol., 304, 447-461.
    • (1999) Methods Enzymol. , vol.304 , pp. 447-461
    • Suter, B.1    Livingstone-Zatchej, M.2    Thoma, F.3
  • 140
    • 0026486603 scopus 로고
    • Preferential repair of cyclobutane pyrimidine dimers in the transcribed strand of a gene in yeast chromosomes and plasmids is dependent on transcription
    • Sweder, K.S. and Hanawalt, P.C. (1992) Preferential repair of cyclobutane pyrimidine dimers in the transcribed strand of a gene in yeast chromosomes and plasmids is dependent on transcription. Proc. Natl Acad. Sci. USA, 89, 10696-10700.
    • (1992) Proc. Natl Acad. Sci. USA , vol.89 , pp. 10696-10700
    • Sweder, K.S.1    Hanawalt, P.C.2
  • 141
    • 0027280417 scopus 로고
    • Electron microscopy of DNA excision repair patches produced by human cell extracts
    • Szymkowski, D.E., Hajibagheri, M.A. and Wood, R.D. (1993) Electron microscopy of DNA excision repair patches produced by human cell extracts. J. Mol. Biol., 231, 251-260.
    • (1993) J. Mol. Biol. , vol.231 , pp. 251-260
    • Szymkowski, D.E.1    Hajibagheri, M.A.2    Wood, R.D.3
  • 143
    • 0029871340 scopus 로고    scopus 로고
    • Chromatin structure of the yeast URA3 gene at high resolution provides insight into structure and positioning of nucleosomes in the chromosomal context
    • Tanaka, S., Livingstone-Zatchej, M. and Thoma, F. (1996) Chromatin structure of the yeast URA3 gene at high resolution provides insight into structure and positioning of nucleosomes in the chromosomal context. J. Mol. Biol., 257, 919-934.
    • (1996) J. Mol. Biol. , vol.257 , pp. 919-934
    • Tanaka, S.1    Livingstone-Zatchej, M.2    Thoma, F.3
  • 144
    • 0031588941 scopus 로고    scopus 로고
    • Excision repair at the level of the nucleotide in the Saccharomyces cerevisiae MFA2 gene: Mapping of where enhanced repair in the transcribed strand begins or ends and identification of only a partial rad16 requisite for repairing upstream control sequences
    • Teng, Y., Li, S., Waters, R. and Reed, S.H. (1997) Excision repair at the level of the nucleotide in the Saccharomyces cerevisiae MFA2 gene: mapping of where enhanced repair in the transcribed strand begins or ends and identification of only a partial rad16 requisite for repairing upstream control sequences. J. Mol. Biol., 267, 324-337.
    • (1997) J. Mol. Biol. , vol.267 , pp. 324-337
    • Teng, Y.1    Li, S.2    Waters, R.3    Reed, S.H.4
  • 145
    • 0023053638 scopus 로고
    • Protein-DNA interactions and nuclease-sensitive regions determine nucleosome positions on yeast plasmid chromatin
    • Thoma, F. (1986) Protein-DNA interactions and nuclease-sensitive regions determine nucleosome positions on yeast plasmid chromatin. J. Mol. Biol., 190, 177-190.
    • (1986) J. Mol. Biol. , vol.190 , pp. 177-190
    • Thoma, F.1
  • 146
    • 0026571527 scopus 로고
    • Nucleosome positioning
    • Thoma, F. (1992) Nucleosome positioning. Biochim. Biophys. Acta, 1130, 1-19.
    • (1992) Biochim. Biophys. Acta , vol.1130 , pp. 1-19
    • Thoma, F.1
  • 147
    • 0018581187 scopus 로고
    • Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin
    • Thoma, F., Koller, T. and Klug, A. (1979) Involvement of histone H1 in the organization of the nucleosome and of the salt-dependent superstructures of chromatin. J. Cell. Biol., 83, 403-427.
    • (1979) J. Cell. Biol. , vol.83 , pp. 403-427
    • Thoma, F.1    Koller, T.2    Klug, A.3
  • 148
    • 0343933773 scopus 로고
    • Structural and functional organisation of yeast chromatin
    • Broda, P.M.A., Oliver, S.G. and Sims, P.F.G. (eds), Cambridge University Press, Cambridge, UK
    • Thoma, F., Cavalli, G. and Tanaka, S. (1993) Structural and functional organisation of yeast chromatin. In Broda, P.M.A., Oliver, S.G. and Sims, P.F.G. (eds), The Eukaryotic Genome. Cambridge University Press, Cambridge, UK, pp. 43-72.
    • (1993) The Eukaryotic Genome , pp. 43-72
    • Thoma, F.1    Cavalli, G.2    Tanaka, S.3
  • 149
    • 10144261891 scopus 로고    scopus 로고
    • Transcription-coupled and global genome repair in the Saccharomyces cerevisiae RPB2 gene at nucleotide resolution
    • Tijsterman, M., Tasseron-de Jong, J.G., van de Putte, P. and Brouwer, J. (1996) Transcription-coupled and global genome repair in the Saccharomyces cerevisiae RPB2 gene at nucleotide resolution. Nucleic Acids Res., 24, 3499-3506.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3499-3506
    • Tijsterman, M.1    Tasseron-De Jong, J.G.2    Van De Putte, P.3    Brouwer, J.4
  • 150
    • 0030838622 scopus 로고    scopus 로고
    • Transitions in the coupling of transcription and nucleotide excision repair within RNA polymerase II-transcribed genes of Saccharomyces cerevisiae
    • Tijsterman, M., Verhage, R.A., van de Putte, P., Tasseron-de Jong, J.G. and Brouwer, J. (1997) Transitions in the coupling of transcription and nucleotide excision repair within RNA polymerase II-transcribed genes of Saccharomyces cerevisiae. Proc. Natl Acad. Sci. USA, 94, 8027-8032.
    • (1997) Proc. Natl Acad. Sci. USA , vol.94 , pp. 8027-8032
    • Tijsterman, M.1    Verhage, R.A.2    Van De Putte, P.3    Tasseron-De Jong, J.G.4    Brouwer, J.5
  • 151
    • 0032963791 scopus 로고    scopus 로고
    • RNA polymerase II transcription suppresses nucleosomal modulation of UV-induced (6-4) photoproduct and cyclobutane pyrimidine dimer repair in yeast
    • Tijsterman, M., de Pril, R., Tasseron-de Jong, J.G. and Brouwer, J. (1999) RNA polymerase II transcription suppresses nucleosomal modulation of UV-induced (6-4) photoproduct and cyclobutane pyrimidine dimer repair in yeast. Mol. Cell. Biol., 19, 934-940.
    • (1999) Mol. Cell. Biol. , vol.19 , pp. 934-940
    • Tijsterman, M.1    De Pril, R.2    Tasseron-De Jong, J.G.3    Brouwer, J.4
  • 152
    • 0032997614 scopus 로고    scopus 로고
    • Functional diversity of the DNA photolyase/blue light receptor family
    • Todo, T. (1999) Functional diversity of the DNA photolyase/blue light receptor family. Mutat. Res., 434, 89-97.
    • (1999) Mutat. Res. , vol.434 , pp. 89-97
    • Todo, T.1
  • 153
    • 0029774202 scopus 로고    scopus 로고
    • Inhibition of transcription factor binding by ultraviolet-induced pyrimidine dimers
    • Tommasi, S., Swiderski, P.M., Tu, Y., Kaplan, B.E. and Pfeifer, G.P. (1996) Inhibition of transcription factor binding by ultraviolet-induced pyrimidine dimers. Biochemistry, 35, 15693-15703.
    • (1996) Biochemistry , vol.35 , pp. 15693-15703
    • Tommasi, S.1    Swiderski, P.M.2    Tu, Y.3    Kaplan, B.E.4    Pfeifer, G.P.5
  • 154
    • 0028215974 scopus 로고
    • Slow repair of pyrimidine dimers at p53 mutation hotspots in skin cancer
    • Tornaletti, S. and Pfeifer, G.P. (1994) Slow repair of pyrimidine dimers at p53 mutation hotspots in skin cancer. Science, 263, 1436-1438.
    • (1994) Science , vol.263 , pp. 1436-1438
    • Tornaletti, S.1    Pfeifer, G.P.2
  • 155
    • 0029058984 scopus 로고
    • UV light as a footprinting agent: Modulation of UV-induced DNA damage by transcription factors bound at the promoters of three human genes
    • Tornaletti, S. and Pfeifer, G.P. (1995) UV light as a footprinting agent: modulation of UV-induced DNA damage by transcription factors bound at the promoters of three human genes. J. Mol. Biol., 249, 714-728.
    • (1995) J. Mol. Biol. , vol.249 , pp. 714-728
    • Tornaletti, S.1    Pfeifer, G.P.2
  • 156
    • 0030111234 scopus 로고    scopus 로고
    • UV damage and repair mechanisms in mammalian cells
    • Tornaletti, S. and Pfeifer, G.P. (1996) UV damage and repair mechanisms in mammalian cells. BioEssays, 18, 221-228.
    • (1996) BioEssays , vol.18 , pp. 221-228
    • Tornaletti, S.1    Pfeifer, G.P.2
  • 157
    • 0033588105 scopus 로고    scopus 로고
    • Structural characterization of RNA polymerase II complexes arrested by a cyclobutane pyrimidine dimer in the transcribed strand of template DNA
    • Tornaletti, S., Reines, D. and Hanawalt, P.C. (1999) Structural characterization of RNA polymerase II complexes arrested by a cyclobutane pyrimidine dimer in the transcribed strand of template DNA. J. Biol. Chem., 274, 24124-24130.
    • (1999) J. Biol. Chem. , vol.274 , pp. 24124-24130
    • Tornaletti, S.1    Reines, D.2    Hanawalt, P.C.3
  • 158
    • 0030024358 scopus 로고    scopus 로고
    • DNA repair domains within a human gene: Selective repair of sequences near the transcription initiation site
    • Tu, Y., Tornaletti, S. and Pfeifer, G.P. (1996) DNA repair domains within a human gene: selective repair of sequences near the transcription initiation site. EMBO J., 15, 675-683.
    • (1996) EMBO J. , vol.15 , pp. 675-683
    • Tu, Y.1    Tornaletti, S.2    Pfeifer, G.P.3
  • 159
    • 0019774960 scopus 로고
    • Increased efficiency of photoreversal of UV-induced dimers in the DNA of chick embryo fibroblasts with post-UV dark time
    • van de Merwe, W. and Bronk, B.V. (1981) Increased efficiency of photoreversal of UV-induced dimers in the DNA of chick embryo fibroblasts with post-UV dark time. Mutat. Res., 84, 429-441.
    • (1981) Mutat. Res. , vol.84 , pp. 429-441
    • Van De Merwe, W.1    Bronk, B.V.2
  • 161
    • 0028863468 scopus 로고
    • Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: Structural basis for damaged DNA recognition
    • Vassylyev, D.G., Kashiwagi, T., Mikami, Y., Ariyoshi, M., Iwai, S., Ohtsuka, E. and Morikawa, K. (1995) Atomic model of a pyrimidine dimer excision repair enzyme complexed with a DNA substrate: structural basis for damaged DNA recognition. Cell, 83, 773-782.
    • (1995) Cell , vol.83 , pp. 773-782
    • Vassylyev, D.G.1    Kashiwagi, T.2    Mikami, Y.3    Ariyoshi, M.4    Iwai, S.5    Ohtsuka, E.6    Morikawa, K.7
  • 162
    • 0025341294 scopus 로고
    • The genetic defect in cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA
    • Venema, J., Mullenders, L.H., Natarajan, A.T., van Zeeland, A.A. and Mayne, L.V. (1990) The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA. Proc. Natl Acad. Sci. USA, 87, 4707-4711.
    • (1990) Proc. Natl Acad. Sci. USA , vol.87 , pp. 4707-4711
    • Venema, J.1    Mullenders, L.H.2    Natarajan, A.T.3    Van Zeeland, A.A.4    Mayne, L.V.5
  • 163
    • 0027999206 scopus 로고
    • The RAD7 and RAD16 genes, which are essential for pyrimidine dimer removal from the silent mating type loci, are also required for repair of the nontranscribed strand of an active gene in saccharomyces cerevisiae
    • Verhage, R., Zeeman, A.M., de Groot, N., Gleig, F., Bang, D.D., van de Putte, P. and Brouwer, J. (1994) The RAD7 and RAD16 genes, which are essential for pyrimidine dimer removal from the silent mating type loci, are also required for repair of the nontranscribed strand of an active gene in Saccharomyces cerevisiae. Mol. Cell. Biol., 14, 6135-6142.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 6135-6142
    • Verhage, R.1    Zeeman, A.M.2    De Groot, N.3    Gleig, F.4    Bang, D.D.5    Van De Putte, P.6    Brouwer, J.7
  • 164
    • 0029670373 scopus 로고    scopus 로고
    • Repair of rDNA in Saccharomyces cerevisiae: R4D4-independent strand-specific nucleotide excision repair of RNA polymerase 1 transcribed genes
    • Verhage, R.A., Van de Putte, P. and Brouwer, J. (1996a) Repair of rDNA in Saccharomyces cerevisiae: R4D4-independent strand-specific nucleotide excision repair of RNA polymerase 1 transcribed genes. Nucleic Acids Res., 24, 1020-1025.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 1020-1025
    • Verhage, R.A.1    Van De Putte, P.2    Brouwer, J.3
  • 165
    • 0030050644 scopus 로고    scopus 로고
    • Analysis of gene- and strand-specific repair in the moderately UV-sensitive saccharomyces cerevisiae rad23 mutant
    • Verhage, R.A., Zeeman, A.M., Lombaerts, M., van de Putte, P. and Brouwer, J. (1996b) Analysis of gene- and strand-specific repair in the moderately UV-sensitive Saccharomyces cerevisiae rad23 mutant. Mutat. Res., 362, 155-165.
    • (1996) Mutat. Res. , vol.362 , pp. 155-165
    • Verhage, R.A.1    Zeeman, A.M.2    Lombaerts, M.3    Van De Putte, P.4    Brouwer, J.5
  • 167
    • 0033603338 scopus 로고    scopus 로고
    • Order of assembly of human DNA repair excision nuclease
    • Wakasugi, M. and Sancar, A. (1999) Order of assembly of human DNA repair excision nuclease. J. Biol. Chem., 274, 18759-18768.
    • (1999) J. Biol. Chem. , vol.274 , pp. 18759-18768
    • Wakasugi, M.1    Sancar, A.2
  • 168
    • 0026001190 scopus 로고
    • Site-specific effect of thymine dimer formation on dAn·dTn tract bending and its biological implications
    • Wang, C.I. and Taylor, J.S. (1991) Site-specific effect of thymine dimer formation on dAn·dTn tract bending and its biological implications. Proc. Natl Acad. Sci. USA, 88, 9072-9076.
    • (1991) Proc. Natl Acad. Sci. USA , vol.88 , pp. 9072-9076
    • Wang, C.I.1    Taylor, J.S.2
  • 169
    • 0025719346 scopus 로고
    • Nucleotide excision repair of DNA by human cell extracts is suppressed in reconstituted nucleosomes
    • Wang, Z.G., Wu, X.H. and Friedberg, E.C. (1991) Nucleotide excision repair of DNA by human cell extracts is suppressed in reconstituted nucleosomes. J. Biol. Chem., 266, 22472-22478.
    • (1991) J. Biol. Chem. , vol.266 , pp. 22472-22478
    • Wang, Z.G.1    Wu, X.H.2    Friedberg, E.C.3
  • 170
    • 0029872697 scopus 로고    scopus 로고
    • Taq DNA polymerase blockage at pyrimidine dimers
    • Wellinger, R.E. and Thoma, F. (1996) Taq DNA polymerase blockage at pyrimidine dimers. Nucleic Acids Res., 24, 1578-1579.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 1578-1579
    • Wellinger, R.E.1    Thoma, F.2
  • 171
    • 0030798002 scopus 로고    scopus 로고
    • Nucleosome structure and positioning modulate nucleotide excision repair in the non-transcribed strand of an active gene
    • Wellinger, R.E. and Thoma, F. (1997) Nucleosome structure and positioning modulate nucleotide excision repair in the non-transcribed strand of an active gene. EMBO J., 16, 5046-5056.
    • (1997) EMBO J. , vol.16 , pp. 5046-5056
    • Wellinger, R.E.1    Thoma, F.2
  • 173
    • 0031831516 scopus 로고    scopus 로고
    • Structure, dynamics and function of chromatin in vitro
    • Widom, J. (1998) Structure, dynamics and function of chromatin in vitro. Annu. Rev. Biophys. Biomol. Struct., 27, 285-327.
    • (1998) Annu. Rev. Biophys. Biomol. Struct. , vol.27 , pp. 285-327
    • Widom, J.1
  • 174
    • 0015959271 scopus 로고
    • Preferential DNA repair in human cells
    • Wilkins, R.J. and Hart, R.W. (1974) Preferential DNA repair in human cells. Nature, 247, 35-36.
    • (1974) Nature , vol.247 , pp. 35-36
    • Wilkins, R.J.1    Hart, R.W.2
  • 175
    • 0004050816 scopus 로고
    • Academic Press, San Diego, CA
    • Wolffe, A. (1995) Chromatin. Academic Press, San Diego, CA.
    • (1995) Chromatin
    • Wolffe, A.1
  • 176
    • 0029892791 scopus 로고    scopus 로고
    • DNA repair in eukaryotes
    • Wood, R.D. (1996) DNA repair in eukaryotes. Annu. Rev. Biochem., 65, 135-167.
    • (1996) Annu. Rev. Biochem. , vol.65 , pp. 135-167
    • Wood, R.D.1
  • 177
    • 0032742715 scopus 로고    scopus 로고
    • DNA damage recognition during nucleotide excision repair in mammalian cells
    • Wood, R.D. (1999) DNA damage recognition during nucleotide excision repair in mammalian cells. Biochimie, 81, 39-44.
    • (1999) Biochimie , vol.81 , pp. 39-44
    • Wood, R.D.1
  • 178
    • 0031707751 scopus 로고    scopus 로고
    • Alteration of nucleosome structure as a mechanism of transcriptional regulation
    • Workman, J.L. and Kingston, R.E. (1998) Alteration of nucleosome structure as a mechanism of transcriptional regulation. Annu. Rev. Biochem., 67, 545-579.
    • (1998) Annu. Rev. Biochem. , vol.67 , pp. 545-579
    • Workman, J.L.1    Kingston, R.E.2
  • 179
    • 0021059965 scopus 로고
    • + gene enhances the ultraviolet resistance of Escherichia coli recA strains in the dark
    • + gene enhances the ultraviolet resistance of Escherichia coli recA strains in the dark. Mol. Gen. Genet., 192, 282-284.
    • (1983) Mol. Gen. Genet. , vol.192 , pp. 282-284
    • Yamamoto, K.1    Fujiwara, Y.2    Shinagawa, H.3
  • 180
    • 0028559513 scopus 로고
    • A new class of DNA photolyases present in various organisms including aplacental mammals
    • Yasui, A., Eker, A.P.M., Yasuhira, S., Yajima, H., Kobayashi, T., Takao, M. and Oikawa, A. (1994) A new class of DNA photolyases present in various organisms including aplacental mammals. EMBO J., 13, 6143-6151.
    • (1994) EMBO J. , vol.13 , pp. 6143-6151
    • Yasui, A.1    Eker, A.P.M.2    Yasuhira, S.3    Yajima, H.4    Kobayashi, T.5    Takao, M.6    Oikawa, A.7
  • 181
    • 0032573432 scopus 로고    scopus 로고
    • Heterogeneous repair of N-methylpurines at the nucleotide level in normal human cells
    • Ye, N., Holmquist, G.P. and O'Connor, T.R. (1998) Heterogeneous repair of N-methylpurines at the nucleotide level in normal human cells. J. Mol. Biol., 284, 269-285.
    • (1998) J. Mol. Biol. , vol.284 , pp. 269-285
    • Ye, N.1    Holmquist, G.P.2    O'Connor, T.R.3
  • 182
    • 0021873382 scopus 로고
    • Microinjected photoreactivating enzymes from Anacystis and Saccharomyces monomerize dimers in chromatin of human cells
    • Zwetsloot, J.C., Vermeulen, W., Hoeijmakers, J.H., Yasui, A., Eker, A.P. and Bootsma, D. (1985) Microinjected photoreactivating enzymes from Anacystis and Saccharomyces monomerize dimers in chromatin of human cells. Mutat. Res., 146, 71-77.
    • (1985) Mutat. Res. , vol.146 , pp. 71-77
    • Zwetsloot, J.C.1    Vermeulen, W.2    Hoeijmakers, J.H.3    Yasui, A.4    Eker, A.P.5    Bootsma, D.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.