Base excision repair of N-methylpurines in a yeast minichromosome: Effects of transcription, DNA sequence, and nucleosome positioning

Journal of Biological Chemistry

Volumn 274, Issue 18, 1999, Pages 12201-12204

  Li, Shisheng ^a   Smerdon, Michael J ^a  

^a WASHINGTON STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PURINE DERIVATIVE;

ARTICLE; CHROMATIN STRUCTURE; CORRELATION FUNCTION; DNA SEQUENCE; EXCISION REPAIR; MINICHROMOSOME; NONHUMAN; NUCLEOSOME; PRIORITY JOURNAL; YEAST;

CHROMOSOMES, FUNGAL; DNA REPAIR; FUNGAL PROTEINS; PURINES; SACCHAROMYCES CEREVISIAE; TRANSCRIPTION, GENETIC;

EID: 0033617284     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.274.18.12201     Document Type: Article

References (26)

1. Seeberg, E., Eide, L., and Bjoras, M. (1995) Trends Biochem. Sci. 20, 391-397
2. Krokan, H. E., Standal, R., and Slupphaug, G. (1997) Biochem. J. 325, 1-16
3. Lau, A. Y., Scharer, O. D., Samson, L., Verdine, G. L., and Ellenberger, T (1998) Cell 95, 249-258
4. Labahn, J., Scharer, O. D., Long, A., Ezaz-Nikpay, K., Verdine, G. L., and Ellenberger, T. E. (1996) Cell 86, 321-329
5. Yamagata, Y., Kato, M., Odawara, K., Tokuno, Y., Nakashima, Y., Matsushima, N., Yasumura, K., Tomita, K., Ihara, K., Fujii, Y., Nakabeppu, Y., Sekiguchi, M., and Fujii, S. (1996) Cell 88, 311-319
6. Mullen, G. P., and Wilson, S. H. (1997) Biochemistry 36, 4713-4717
7. Rydberg, B., and Lindahl, T. (1982) EMBO J. 1, 211-216
8. Pieper, R. O. (1998) in DNA Damage and Repair: DNA Repair in Higher Eukaryotes (Nickoloff, J. A., and Hoekstra, M. F., eds) Vol. 2, pp. 33-49, Humana Press, Totowa, NJ
9. Xiao, W., and Chow, B. L. (1998) Curr. Genet. 33, 92-99
10. Chen, J., Derfler, B., Maskati, A., and Samson, L. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 7961-7965
11. Leadon, S. A., and Lawrence, D. A. (1992) J. Biol. Chem. 267, 23175-23182
12. Leadon, S. A., and Cooper, P. K. (1993) Proc. Natl. Acad. Sci. U. S. A. 90, 10499-10503
13. LeDoux, S. P., Patton, N. J., Nelson, J. W., Bohr, V. A., and Wilson, G. L. (1990) J. Biol. Chem. 265, 14875-14880
14. Scicchitano, D. A., and Hanawalt, P. C. (1989) Proc. Natl. Acad. Sci. U. S. A. 86, 3050-3054
15. Scicchitano, D. A., and Hanawalt, P. C. (1990) Mutat. Res. 233, 31-37
16. Wassermann, K., Kohn, K. W., and Bohr, V. A. (1990) J. Biol. Chem. 265, 13906-13913
17. Ye, N., Holmquist, G. P., and O'Connor, T. R. (1998) J. Mol. Biol. 284, 269-285
18. Smerdon, M. J., and Thoma, F. (1998) in DNA Damage and Repair: DNA Repair in Higher Eukaryotes (Nickoloff, J. A., and Hoekstra, M. F., eds) Vol. 2, pp. 199-222, Humana Press, Totowa, NJ
19. Omari, S. (1990) Chromatin Structure during Transcription in the Yeast Saccharomyces cerevisiae. Ph. D. Thesis, Swiss Federal Institute of Technology, Zurich, Switzerland
20. Abanobi, S. E., Columbano, A., Mulivor, R. A., Rajalakshmi, S., and Sarma, D. S. R. (1980) Biochemistry 19, 1382-1387
21. Smerdon, M. J., and Thoma, F. (1990) Cell 61, 675-684
22. Li, S., and Waters, R. (1996) Carcinogenesis 17, 1549-1552
23. Li, S., Waters, R., and Smerdon, M. J. (1999) Methods Companion Methods Enzymol., in press
24. Maxam, A. M., and Gilbert, W. (1980) Methods Enzymol. 65, 499-560
25. Smerdon, M. J., Gupta, R., and Murad, A. O. (1993) in DNA Repair Mechanisms, Alfred Benzon Symposium 35 (Bohr, V. A., Wassermann, K., and Kraemer, K. H., eds) pp. 258-270, Munksgaard, Copenhagen, Denmark
26. Friedman, R. A., and Honig, B. (1995) Biophys. J. 69, 1528-1535