메뉴 건너뛰기




Volumn 2, Issue 8, 2018, Pages 1268-1279

The evolutionary road from wild moth to domestic silkworm

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL; BOMBYX; CHINA; CIRCADIAN RHYTHM; DOMESTICATION; FEMALE; GENETICS; MALE; MOLECULAR EVOLUTION;

EID: 85049574763     PISSN: None     EISSN: 2397334X     Source Type: Journal    
DOI: 10.1038/s41559-018-0593-4     Document Type: Article
Times cited : (92)

References (78)
  • 2
    • 84906241369 scopus 로고    scopus 로고
    • Behavior genetics and the domestication of animals
    • PID: 25384136
    • Jensen, P. Behavior genetics and the domestication of animals. Annu. Rev. Anim. Biosci. 2, 85–104 (2014).
    • (2014) Annu. Rev. Anim. Biosci. , vol.2 , pp. 85-104
    • Jensen, P.1
  • 4
    • 84867875610 scopus 로고    scopus 로고
    • A map of rice genome variation reveals the origin of cultivated rice
    • PID: 23034647
    • Huang, X. et al. A map of rice genome variation reveals the origin of cultivated rice. Nature 490, 497–501 (2012).
    • (2012) Nature , vol.490 , pp. 497-501
    • Huang, X.1
  • 5
    • 84862993359 scopus 로고    scopus 로고
    • Comparative population genomics of maize domestication and improvement
    • PID: 22660546
    • Hufford, M. B. et al. Comparative population genomics of maize domestication and improvement. Nat. Genet. 44, 808–811 (2012).
    • (2012) Nat. Genet. , vol.44 , pp. 808-811
    • Hufford, M.B.1
  • 6
    • 84888360015 scopus 로고    scopus 로고
    • A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity
    • PID: 24141363
    • Qi, J. et al. A genomic variation map provides insights into the genetic basis of cucumber domestication and diversity. Nat. Genet. 45, 1510–1515 (2013).
    • (2013) Nat. Genet. , vol.45 , pp. 1510-1515
    • Qi, J.1
  • 7
    • 84926667701 scopus 로고    scopus 로고
    • Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean
    • PID: 25643055
    • Zhou, Z. et al. Resequencing 302 wild and cultivated accessions identifies genes related to domestication and improvement in soybean. Nat. Biotechnol. 33, 408–414 (2015).
    • (2015) Nat. Biotechnol. , vol.33 , pp. 408-414
    • Zhou, Z.1
  • 8
    • 84978699389 scopus 로고    scopus 로고
    • Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley
    • PID: 27428749
    • Mascher, M. et al. Genomic analysis of 6,000-year-old cultivated grain illuminates the domestication history of barley. Nat. Genet. 48, 1089–1093 (2016).
    • (2016) Nat. Genet. , vol.48 , pp. 1089-1093
    • Mascher, M.1
  • 9
    • 84908689021 scopus 로고    scopus 로고
    • Genomic analyses provide insights into the history of tomato breeding
    • PID: 25305757
    • Lin, T. et al. Genomic analyses provide insights into the history of tomato breeding. Nat. Genet. 46, 1220–1226 (2014).
    • (2014) Nat. Genet. , vol.46 , pp. 1220-1226
    • Lin, T.1
  • 10
    • 33745947603 scopus 로고    scopus 로고
    • Molecular phylogeny of silkmoths reveals the origin of domesticated silkmoth, Bombyx mori from Chinese Bombyx mandarina and paternal inheritance of Antheraea proylei mitochondrial DNA
    • PID: 16644243
    • Arunkumar, K. P., Metta, M. & Nagaraju, J. Molecular phylogeny of silkmoths reveals the origin of domesticated silkmoth, Bombyx mori from Chinese Bombyx mandarina and paternal inheritance of Antheraea proylei mitochondrial DNA. Mol. Phylogenet. Evol. 40, 419–427 (2006).
    • (2006) Mol. Phylogenet. Evol. , vol.40 , pp. 419-427
    • Arunkumar, K.P.1    Metta, M.2    Nagaraju, J.3
  • 11
    • 70350134644 scopus 로고    scopus 로고
    • Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx)
    • PID: 19713493
    • Xia, Q. et al. Complete resequencing of 40 genomes reveals domestication events and genes in silkworm (Bombyx). Science 326, 433–436 (2009).
    • (2009) Science , vol.326 , pp. 433-436
    • Xia, Q.1
  • 12
    • 84886308657 scopus 로고    scopus 로고
    • Detecting range expansions from genetic data
    • PID: 24152007
    • Peter, B. M. & Slatkin, M. Detecting range expansions from genetic data. Evolution 67, 3274–3289 (2013).
    • (2013) Evolution , vol.67 , pp. 3274-3289
    • Peter, B.M.1    Slatkin, M.2
  • 13
    • 84869026948 scopus 로고    scopus 로고
    • Inference of population splits and mixtures from genome-wide allele frequency data
    • PID: 23166502
    • Pickrell, J. K. & Pritchard, J. K. Inference of population splits and mixtures from genome-wide allele frequency data. PLoS Genet. 8, e1002967 (2012).
    • (2012) PLoS Genet. , vol.8
    • Pickrell, J.K.1    Pritchard, J.K.2
  • 14
    • 84869057650 scopus 로고    scopus 로고
    • Ancient admixture in human history
    • PID: 22960212
    • Patterson, N. et al. Ancient admixture in human history. Genetics 192, 1065–1093 (2012).
    • (2012) Genetics , vol.192 , pp. 1065-1093
    • Patterson, N.1
  • 15
    • 84905572361 scopus 로고    scopus 로고
    • Inferring human population size and separation history from multiple genome sequences
    • PID: 24952747
    • Schiffels, S. & Durbin, R. Inferring human population size and separation history from multiple genome sequences. Nat. Genet. 46, 919–925 (2014).
    • (2014) Nat. Genet. , vol.46 , pp. 919-925
    • Schiffels, S.1    Durbin, R.2
  • 16
    • 0037030746 scopus 로고    scopus 로고
    • Regulation of glutamine metabolism during the development of Bombyx mori larvae
    • PID: 12049793
    • Hirayama, C. & Nakamura, M. Regulation of glutamine metabolism during the development of Bombyx mori larvae. Biochim. Biophys. Acta 1571, 131–137 (2002).
    • (2002) Biochim. Biophys. Acta , vol.1571 , pp. 131-137
    • Hirayama, C.1    Nakamura, M.2
  • 17
    • 0034018321 scopus 로고    scopus 로고
    • Biosynthesis of l-alanine, a major amino acid of fibroin in Samia cynthia ricini
    • PID: 10732990
    • Osanai, M., Okudaira, M., Naito, J., Demura, M. & Asakura, T. Biosynthesis of l-alanine, a major amino acid of fibroin in Samia cynthia ricini. Insect Biochem. Mol. Biol. 30, 225–232 (2000).
    • (2000) Insect Biochem. Mol. Biol. , vol.30 , pp. 225-232
    • Osanai, M.1    Okudaira, M.2    Naito, J.3    Demura, M.4    Asakura, T.5
  • 18
    • 0031259887 scopus 로고    scopus 로고
    • The pathway of ammonia assimilation in the silkworm, Bombyx mori
    • PID: 12770466
    • Hirayama, C., Konno, K. & Shinbo, H. The pathway of ammonia assimilation in the silkworm, Bombyx mori. J. Insect Physiol. 43, 959–964 (1997).
    • (1997) J. Insect Physiol. , vol.43 , pp. 959-964
    • Hirayama, C.1    Konno, K.2    Shinbo, H.3
  • 19
    • 0030060882 scopus 로고    scopus 로고
    • Nitrogen recycling in the brown planthopper, Nilaparvata lugens: involvement of yeast-like endosymbionts in uric acid metabolism
    • Sasaki, T., Kawamura, M. & Ishikawa, H. Nitrogen recycling in the brown planthopper, Nilaparvata lugens: involvement of yeast-like endosymbionts in uric acid metabolism. J. Insect Physiol. 42, 125–129 (1996).
    • (1996) J. Insect Physiol. , vol.42 , pp. 125-129
    • Sasaki, T.1    Kawamura, M.2    Ishikawa, H.3
  • 20
    • 84964670673 scopus 로고    scopus 로고
    • Asparagine promotes cancer cell proliferation through use as an amino acid exchange factor
    • PID: 27126896
    • Krall, A. S., Xu, S., Graeber, T. G., Braas, D. & Christofk, H. R. Asparagine promotes cancer cell proliferation through use as an amino acid exchange factor. Nat. Commun. 7, 11457 (2016).
    • (2016) Nat. Commun. , vol.7
    • Krall, A.S.1    Xu, S.2    Graeber, T.G.3    Braas, D.4    Christofk, H.R.5
  • 21
    • 84877924254 scopus 로고    scopus 로고
    • Amino acid deprivation-induced expression of asparagine synthetase regulates the growth and survival of cultured silkworm cells
    • PID: 23633098
    • Li, Z. et al. Amino acid deprivation-induced expression of asparagine synthetase regulates the growth and survival of cultured silkworm cells. Arch. Insect Biochem. Physiol. 83, 57–68 (2013).
    • (2013) Arch. Insect Biochem. Physiol. , vol.83 , pp. 57-68
    • Li, Z.1
  • 22
    • 84948701108 scopus 로고    scopus 로고
    • Glutamine synthetase activity fuels nucleotide biosynthesis and supports growth of glutamine-restricted glioblastoma
    • PID: 26595383
    • Tardito, S. et al. Glutamine synthetase activity fuels nucleotide biosynthesis and supports growth of glutamine-restricted glioblastoma. Nat. Cell Biol. 17, 1556–1568 (2015).
    • (2015) Nat. Cell Biol. , vol.17 , pp. 1556-1568
    • Tardito, S.1
  • 23
    • 84891911443 scopus 로고    scopus 로고
    • Advances in silkworm studies accelerated by the genome sequencing of Bombyx mori
    • PID: 24160415
    • Xia, Q., Li, S. & Feng, Q. Advances in silkworm studies accelerated by the genome sequencing of Bombyx mori. Annu. Rev. Entomol. 59, 513–536 (2014).
    • (2014) Annu. Rev. Entomol. , vol.59 , pp. 513-536
    • Xia, Q.1    Li, S.2    Feng, Q.3
  • 25
    • 84947087027 scopus 로고    scopus 로고
    • Domestication selected for deceleration of the circadian clock in cultivated tomato
    • PID: 26569124
    • Muller, N. A. et al. Domestication selected for deceleration of the circadian clock in cultivated tomato. Nat. Genet. 48, 89–93 (2016).
    • (2016) Nat. Genet. , vol.48 , pp. 89-93
    • Muller, N.A.1
  • 26
    • 0035458732 scopus 로고    scopus 로고
    • Time zones: a comparative genetics of circadian clocks
    • PID: 11533719
    • Young, M. W. & Kay, S. A. Time zones: a comparative genetics of circadian clocks. Nat. Rev. Genet. 2, 702–715 (2001).
    • (2001) Nat. Rev. Genet. , vol.2 , pp. 702-715
    • Young, M.W.1    Kay, S.A.2
  • 27
    • 85031107411 scopus 로고    scopus 로고
    • Keeping time without a spine: what can the insect clock teach us about seasonal adaptation?
    • PID: 28993500
    • Denlinger, D. L., Hahn, D. A., Merlin, C., Holzapfel, C. M. & Bradshaw, W. E. Keeping time without a spine: what can the insect clock teach us about seasonal adaptation? Phil. Trans. R. Soc. B 372, 20160257 (2017).
    • (2017) Phil. Trans. R. Soc. B , vol.372 , pp. 20160257
    • Denlinger, D.L.1    Hahn, D.A.2    Merlin, C.3    Holzapfel, C.M.4    Bradshaw, W.E.5
  • 28
    • 84866905857 scopus 로고    scopus 로고
    • Modeling the seasonal adaptation of circadian clocks by changes in the network structure of the suprachiasmatic nucleus
    • PID: 23028293
    • Bodenstein, C., Gosak, M., Schuster, S., Marhl, M. & Perc, M. Modeling the seasonal adaptation of circadian clocks by changes in the network structure of the suprachiasmatic nucleus. PLoS Comput. Biol. 8, e1002697 (2012).
    • (2012) PLoS Comput. Biol. , vol.8
    • Bodenstein, C.1    Gosak, M.2    Schuster, S.3    Marhl, M.4    Perc, M.5
  • 29
    • 84891695164 scopus 로고    scopus 로고
    • Regulation of insect behavior via the insulin-signaling pathway
    • PID: 24348428
    • Erion, R. & Sehgal, A. Regulation of insect behavior via the insulin-signaling pathway. Front. Physiol. 4, 353 (2013).
    • (2013) Front. Physiol. , vol.4 , pp. 353
    • Erion, R.1    Sehgal, A.2
  • 30
    • 81855174762 scopus 로고    scopus 로고
    • The monarch butterfly genome yields insights into long-distance migration
    • PID: 22118469
    • Zhan, S., Merlin, C., Boore, J. L. & Reppert, S. M. The monarch butterfly genome yields insights into long-distance migration. Cell 147, 1171–1185 (2011).
    • (2011) Cell , vol.147 , pp. 1171-1185
    • Zhan, S.1    Merlin, C.2    Boore, J.L.3    Reppert, S.M.4
  • 31
    • 84925780243 scopus 로고    scopus 로고
    • Two insulin receptors determine alternative wing morphs in planthoppers
    • PID: 25799997
    • Xu, H.-J. et al. Two insulin receptors determine alternative wing morphs in planthoppers. Nature 519, 464–467 (2015).
    • (2015) Nature , vol.519 , pp. 464-467
    • Xu, H.J.1
  • 32
    • 44349138039 scopus 로고    scopus 로고
    • Insulin signaling and FOXO regulate the overwintering diapause of the mosquito Culex pipiens
    • PID: 18448677
    • Sim, C. & Denlinger, D. L. Insulin signaling and FOXO regulate the overwintering diapause of the mosquito Culex pipiens. Proc. Natl Acad. Sci. USA 105, 6777–6781 (2008).
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 6777-6781
    • Sim, C.1    Denlinger, D.L.2
  • 33
    • 3142698285 scopus 로고    scopus 로고
    • Metabolic shifts in carbohydrate metabolism during embryonic development of non-diapause eggs of the silkworm, Bombyx mori
    • Sakano, D., Furusawa, T., Sugimura, Y., Storey, J. M. & Storey, K. B. Metabolic shifts in carbohydrate metabolism during embryonic development of non-diapause eggs of the silkworm, Bombyx mori. J. Insect Biotechnol. Sericol. 73, 15–22 (2004).
    • (2004) J. Insect Biotechnol. Sericol. , vol.73 , pp. 15-22
    • Sakano, D.1    Furusawa, T.2    Sugimura, Y.3    Storey, J.M.4    Storey, K.B.5
  • 34
    • 84980086466 scopus 로고
    • Carbohydrate metabolism in diapause egg of the silkworm, Bombyx mori
    • Chino, H. Carbohydrate metabolism in diapause egg of the silkworm, Bombyx mori. Dev. Growth Differ. 3, 295–316 (1957).
    • (1957) Dev. Growth Differ. , vol.3 , pp. 295-316
    • Chino, H.1
  • 35
    • 85008689993 scopus 로고    scopus 로고
    • Genome-wide association study identifies distinct genetic contributions to prognosis and susceptibility in Crohn’s disease
    • PID: 28067912
    • Lee, J. C. et al. Genome-wide association study identifies distinct genetic contributions to prognosis and susceptibility in Crohn’s disease. Nat. Genet. 49, 262–268 (2017).
    • (2017) Nat. Genet. , vol.49 , pp. 262-268
    • Lee, J.C.1
  • 36
    • 84975256248 scopus 로고    scopus 로고
    • Genome-wide association study using whole-genome sequencing rapidly identifies new genes influencing agronomic traits in rice
    • PID: 27322545
    • Yano, K. et al. Genome-wide association study using whole-genome sequencing rapidly identifies new genes influencing agronomic traits in rice. Nat. Genet. 48, 927–934 (2016).
    • (2016) Nat. Genet. , vol.48 , pp. 927-934
    • Yano, K.1
  • 37
    • 85050612281 scopus 로고    scopus 로고
    • Genome-wide analysis identifies 12 loci influencing human reproductive behavior
    • Nicola, N. et al. Genome-wide analysis identifies 12 loci influencing human reproductive behavior. Nat. Genet. 48, 1–7 (2016).
    • (2016) Nat. Genet. , vol.48 , pp. 1-7
    • Nicola, N.1
  • 38
    • 34547483580 scopus 로고    scopus 로고
    • Carotenoid silk coloration is controlled by a carotenoid-binding protein, a product of the Yellow blood gene
    • PID: 17496138
    • Sakudoh, T. et al. Carotenoid silk coloration is controlled by a carotenoid-binding protein, a product of the Yellow blood gene. Proc. Natl Acad. Sci. USA 104, 8941–8946 (2007).
    • (2007) Proc. Natl Acad. Sci. USA , vol.104 , pp. 8941-8946
    • Sakudoh, T.1
  • 39
    • 84923341784 scopus 로고    scopus 로고
    • The transcription factor Apontic-like controls diverse colouration pattern in caterpillars
    • PID: 25233442
    • Yoda, S. et al. The transcription factor Apontic-like controls diverse colouration pattern in caterpillars. Nat. Commun. 5, 4936 (2014).
    • (2014) Nat. Commun. , vol.5
    • Yoda, S.1
  • 40
    • 44949166820 scopus 로고    scopus 로고
    • Deletion of a gene encoding an amino acid transporter in the midgut membrane causes resistance to a Bombyx parvo-like virus
    • PID: 18495929
    • Ito, K. et al. Deletion of a gene encoding an amino acid transporter in the midgut membrane causes resistance to a Bombyx parvo-like virus. Proc. Natl Acad. Sci. USA 105, 7523–7527 (2008).
    • (2008) Proc. Natl Acad. Sci. USA , vol.105 , pp. 7523-7527
    • Ito, K.1
  • 41
    • 84928995376 scopus 로고    scopus 로고
    • Densovirus infection in silkworm Bombyx mori and genes associated with disease resistance
    • Gupta, T., Kadono-Okuda, K., Ito, K., Trivedy, K. & Ponnuvel, K. M. Densovirus infection in silkworm Bombyx mori and genes associated with disease resistance. Invertebr. Surviv. J. 12, 118–128 (2015).
    • (2015) Invertebr. Surviv. J. , vol.12 , pp. 118-128
    • Gupta, T.1    Kadono-Okuda, K.2    Ito, K.3    Trivedy, K.4    Ponnuvel, K.M.5
  • 42
    • 79953190777 scopus 로고    scopus 로고
    • Diversity in copy number and structure of a silkworm morphogenetic gene as a result of domestication
    • PID: 21242537
    • Sakudoh, T. et al. Diversity in copy number and structure of a silkworm morphogenetic gene as a result of domestication. Genetics 187, 965–976 (2011).
    • (2011) Genetics , vol.187 , pp. 965-976
    • Sakudoh, T.1
  • 43
    • 77955684963 scopus 로고    scopus 로고
    • Changes in nitrogen assimilation, metabolism, and growth in transgenic rice plants expressing a fungal NADP (H)-dependent glutamate dehydrogenase (gdhA)
    • PID: 20443025
    • Abiko, T. et al. Changes in nitrogen assimilation, metabolism, and growth in transgenic rice plants expressing a fungal NADP (H)-dependent glutamate dehydrogenase (gdhA). Planta 232, 299–311 (2010).
    • (2010) Planta , vol.232 , pp. 299-311
    • Abiko, T.1
  • 44
    • 67349135788 scopus 로고    scopus 로고
    • Over-expression of aspartate aminotransferase genes in rice resulted in altered nitrogen metabolism and increased amino acid content in seeds
    • PID: 19259642
    • Zhou, Y. et al. Over-expression of aspartate aminotransferase genes in rice resulted in altered nitrogen metabolism and increased amino acid content in seeds. Theor. Appl. Genet. 118, 1381–1390 (2009).
    • (2009) Theor. Appl. Genet. , vol.118 , pp. 1381-1390
    • Zhou, Y.1
  • 45
    • 84908689021 scopus 로고    scopus 로고
    • Genomic analyses provide insights into the history of tomato breeding
    • PID: 25305757
    • Lin, T. et al. Genomic analyses provide insights into the history of tomato breeding. Nat. Genet. 46, 1220–1226 (2014).
    • (2014) Nat. Genet. , vol.46 , pp. 1220-1226
    • Lin, T.1
  • 46
    • 77950080740 scopus 로고    scopus 로고
    • Whole-genome resequencing reveals loci under selection during chicken domestication
    • PID: 20220755
    • Rubin, C. J. et al. Whole-genome resequencing reveals loci under selection during chicken domestication. Nature 464, 587–591 (2010).
    • (2010) Nature , vol.464 , pp. 587-591
    • Rubin, C.J.1
  • 47
    • 80053183745 scopus 로고    scopus 로고
    • Deciphering the genetic basis of animal domestication
    • PID: 21885467
    • Wiener, P. & Wilkinson, S. Deciphering the genetic basis of animal domestication. Proc. Biol. Sci. 278, 3161–3170 (2011).
    • (2011) Proc. Biol. Sci. , vol.278 , pp. 3161-3170
    • Wiener, P.1    Wilkinson, S.2
  • 48
    • 84873595859 scopus 로고    scopus 로고
    • Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus)
    • PID: 23263233
    • Dong, Y. et al. Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus). Nat. Biotechnol. 31, 135–141 (2013).
    • (2013) Nat. Biotechnol. , vol.31 , pp. 135-141
    • Dong, Y.1
  • 49
    • 79958290643 scopus 로고    scopus 로고
    • The biology of genomes. On the trail of brain domestication genes
    • Pennisi, E. The biology of genomes. On the trail of brain domestication genes. Science 332, 1030–1031 (2011).
    • (2011) Science , vol.332 , pp. 1030-1031
    • Pennisi, E.1
  • 50
    • 84921866241 scopus 로고    scopus 로고
    • Animal domestication. The genes that turned wildcats into kitty cats
    • PID: 25395514
    • Grimm, D. Animal domestication. The genes that turned wildcats into kitty cats. Science 346, 799 (2014).
    • (2014) Science , vol.346 , pp. 799
    • Grimm, D.1
  • 51
    • 84942321782 scopus 로고    scopus 로고
    • Domestication of the dog from the wolf was promoted by enhanced excitatory synaptic plasticity: a hypothesis
    • PID: 25377939
    • Li, Y. et al. Domestication of the dog from the wolf was promoted by enhanced excitatory synaptic plasticity: a hypothesis. Genome Biol. Evol. 6, 3115–3121 (2014).
    • (2014) Genome Biol. Evol. , vol.6 , pp. 3115-3121
    • Li, Y.1
  • 52
    • 84924136440 scopus 로고    scopus 로고
    • A genome-wide scan for signatures of directional selection in domesticated pigs
    • Moon, S. et al. A genome-wide scan for signatures of directional selection in domesticated pigs. BMC Genom. 16, 130 (2015).
    • (2015) BMC Genom. , vol.16
    • Moon, S.1
  • 53
    • 84907190357 scopus 로고    scopus 로고
    • Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication
    • PID: 25170157
    • Carneiro, M. et al. Rabbit genome analysis reveals a polygenic basis for phenotypic change during domestication. Science 345, 1074–1079 (2014).
    • (2014) Science , vol.345 , pp. 1074-1079
    • Carneiro, M.1
  • 54
    • 59649116641 scopus 로고    scopus 로고
    • The genome of a lepidopteran model insect, the silkworm Bombyx mori
    • Consortium, I. S. G. The genome of a lepidopteran model insect, the silkworm Bombyx mori. Insect Biochem. Mol. Biol. 38, 1036–1045 (2008).
    • (2008) Insect Biochem. Mol. Biol. , vol.38 , pp. 1036-1045
    • Consortium, I.S.G.1
  • 55
    • 84942887758 scopus 로고    scopus 로고
    • SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler
    • PID: 23587118
    • Luo, R. et al. SOAPdenovo2: an empirically improved memory-efficient short-read de novo assembler. Gigascience 1, 18 (2012).
    • (2012) Gigascience , vol.1
    • Luo, R.1
  • 56
    • 34147180390 scopus 로고    scopus 로고
    • Creating a honey bee consensus gene set
    • PID: 17241472
    • Elsik, C. G. et al. Creating a honey bee consensus gene set. Genome Biol. 8, R13 (2007).
    • (2007) Genome Biol. , vol.8
    • Elsik, C.G.1
  • 57
    • 75549089913 scopus 로고    scopus 로고
    • SilkDBv2.0: a platform for silkworm (Bombyx mori) genome biology
    • PID: 19793867
    • Duan, J. et al. SilkDBv2.0: a platform for silkworm (Bombyx mori) genome biology. Nucleic Acids Res. 38, D453–D456 (2010).
    • (2010) Nucleic Acids Res. , vol.38 , pp. D453-D456
    • Duan, J.1
  • 58
    • 33748674197 scopus 로고    scopus 로고
    • AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome
    • Stanke, M., Tzvetkova, A. & Morgenstern, B. AUGUSTUS at EGASP: using EST, protein and genomic alignments for improved gene prediction in the human genome. Genome Biol. 7, S11.1–S11.8 (2006).
    • (2006) Genome Biol. , vol.7 , pp. S11.1-S11.8
    • Stanke, M.1    Tzvetkova, A.2    Morgenstern, B.3
  • 59
    • 2942544417 scopus 로고    scopus 로고
    • Gene finding in novel genomes
    • Korf, I. Gene finding in novel genomes. BMC Bioinform. 5, 59 (2004).
    • (2004) BMC Bioinform. , vol.5 , pp. 59
    • Korf, I.1
  • 60
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • PID: 9149143
    • Burge, C. & Karlin, S. Prediction of complete gene structures in human genomic DNA. J. Mol. Biol. 268, 78–94 (1997).
    • (1997) J. Mol. Biol. , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2
  • 61
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows–Wheeler transform
    • PID: 19451168
    • Li, H. & Durbin, R. Fast and accurate short read alignment with Burrows–Wheeler transform. Bioinformatics 25, 1754–1760 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 62
    • 68549104404 scopus 로고    scopus 로고
    • The Sequence Alignment/Map format and SAMtools
    • PID: 19505943
    • Li, H. et al. The Sequence Alignment/Map format and SAMtools. Bioinformatics 25, 2078–2079 (2009).
    • (2009) Bioinformatics , vol.25 , pp. 2078-2079
    • Li, H.1
  • 63
    • 79955483667 scopus 로고    scopus 로고
    • A framework for variation discovery and genotyping using next-generation DNA sequencing data
    • PID: 21478889
    • DePristo, M. A. et al. A framework for variation discovery and genotyping using next-generation DNA sequencing data. Nat. Genet. 43, 491–498 (2011).
    • (2011) Nat. Genet. , vol.43 , pp. 491-498
    • DePristo, M.A.1
  • 64
    • 33846006923 scopus 로고    scopus 로고
    • Population structure and eigenanalysis
    • PID: 17194218
    • Patterson, N., Price, A. L. & Reich, D. Population structure and eigenanalysis. PLoS Genet. 2, e190 (2006).
    • (2006) PLoS Genet. , vol.2
    • Patterson, N.1    Price, A.L.2    Reich, D.3
  • 65
    • 84908138115 scopus 로고    scopus 로고
    • The genetics of monarch butterfly migration and warning colouration
    • PID: 25274300
    • Zhan, S. et al. The genetics of monarch butterfly migration and warning colouration. Nature 514, 317–321 (2014).
    • (2014) Nature , vol.514 , pp. 317-321
    • Zhan, S.1
  • 66
    • 84890330527 scopus 로고    scopus 로고
    • MEGA6: Molecular Evolutionary Genetics Analysis version 6.0
    • PID: 24132122
    • Tamura, K., Stecher, G., Peterson, D., Filipski, A. & Kumar, S. MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol. Biol. Evol. 30, 2725–2729 (2013).
    • (2013) Mol. Biol. Evol. , vol.30 , pp. 2725-2729
    • Tamura, K.1    Stecher, G.2    Peterson, D.3    Filipski, A.4    Kumar, S.5
  • 67
    • 17644402806 scopus 로고    scopus 로고
    • Estimation of individual admixture: analytical and study design considerations
    • PID: 15712363
    • Tang, H., Peng, J., Wang, P. & Risch, N. J. Estimation of individual admixture: analytical and study design considerations. Genet. Epidemiol. 28, 289–301 (2005).
    • (2005) Genet. Epidemiol. , vol.28 , pp. 289-301
    • Tang, H.1    Peng, J.2    Wang, P.3    Risch, N.J.4
  • 68
    • 84922371114 scopus 로고    scopus 로고
    • Estimation of the spontaneous mutation rate in Heliconius melpomene
    • PID: 25371432
    • Keightley, P. D. et al. Estimation of the spontaneous mutation rate in Heliconius melpomene. Mol. Biol. Evol. 32, 239–243 (2014).
    • (2014) Mol. Biol. Evol. , vol.32 , pp. 239-243
    • Keightley, P.D.1
  • 69
    • 13444269543 scopus 로고    scopus 로고
    • Haploview: analysis and visualization of LD and haplotype maps
    • PID: 15297300
    • Barrett, J. C., Fry, B., Maller, J. & Daly, M. J. Haploview: analysis and visualization of LD and haplotype maps. Bioinformatics 21, 263–265 (2004).
    • (2004) Bioinformatics , vol.21 , pp. 263-265
    • Barrett, J.C.1    Fry, B.2    Maller, J.3    Daly, M.J.4
  • 70
    • 77649260327 scopus 로고    scopus 로고
    • Population differentiation as a test for selective sweeps
    • PID: 20086244
    • Chen, H., Patterson, N. & Reich, D. Population differentiation as a test for selective sweeps. Genome Res. 20, 393–402 (2010).
    • (2010) Genome Res. , vol.20 , pp. 393-402
    • Chen, H.1    Patterson, N.2    Reich, D.3
  • 71
    • 27544437635 scopus 로고    scopus 로고
    • Genomic scans for selective sweeps using SNP data
    • PID: 16251466
    • Nielsen, R. et al. Genomic scans for selective sweeps using SNP data. Genome Res. 15, 1566–1575 (2005).
    • (2005) Genome Res. , vol.15 , pp. 1566-1575
    • Nielsen, R.1
  • 72
    • 79957532987 scopus 로고    scopus 로고
    • Evidence of selection at melanin synthesis pathway loci during silkworm domestication
    • PID: 21212153
    • Yu, H. S. et al. Evidence of selection at melanin synthesis pathway loci during silkworm domestication. Mol. Biol. Evol. 28, 1785–1799 (2011).
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 1785-1799
    • Yu, H.S.1
  • 73
    • 84924937467 scopus 로고    scopus 로고
    • An adaptive transposable element insertion in the regulatory region of the EO gene in the domesticated silkworm, Bombyx mori
    • PID: 25213334
    • Sun, W., Shen, Y. H., Han, M. J., Cao, Y. F. & Zhang, Z. An adaptive transposable element insertion in the regulatory region of the EO gene in the domesticated silkworm, Bombyx mori. Mol. Biol. Evol. 31, 3302–3313 (2014).
    • (2014) Mol. Biol. Evol. , vol.31 , pp. 3302-3313
    • Sun, W.1    Shen, Y.H.2    Han, M.J.3    Cao, Y.F.4    Zhang, Z.5
  • 74
    • 84889080192 scopus 로고    scopus 로고
    • The CRISPR/Cas system mediates efficient genome engineering in Bombyx mori
    • PID: 24165890
    • Wang, Y. et al. The CRISPR/Cas system mediates efficient genome engineering in Bombyx mori. Cell Res. 23, 1414–1416 (2013).
    • (2013) Cell Res. , vol.23 , pp. 1414-1416
    • Wang, Y.1
  • 75
    • 77950301214 scopus 로고    scopus 로고
    • Variance component model to account for sample structure in genome-wide association studies
    • PID: 20208533
    • Kang, H. M. et al. Variance component model to account for sample structure in genome-wide association studies. Nat. Genet. 42, 348–354 (2010).
    • (2010) Nat. Genet. , vol.42 , pp. 348-354
    • Kang, H.M.1
  • 76
    • 79952178131 scopus 로고    scopus 로고
    • High-quality draft assemblies of mammalian genomes from massively parallel sequence data
    • PID: 21187386
    • Gnerre, S. et al. High-quality draft assemblies of mammalian genomes from massively parallel sequence data. Proc. Natl Acad. Sci. USA 108, 1513–1518 (2011).
    • (2011) Proc. Natl Acad. Sci. USA , vol.108 , pp. 1513-1518
    • Gnerre, S.1
  • 78
    • 77951770756 scopus 로고    scopus 로고
    • BEDTools: a flexible suite of utilities for comparing genomic features
    • PID: 20110278
    • Quinlan, A. R. & Hall, I. M. BEDTools: a flexible suite of utilities for comparing genomic features. Bioinformatics 26, 841–842 (2010).
    • (2010) Bioinformatics , vol.26 , pp. 841-842
    • Quinlan, A.R.1    Hall, I.M.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.