메뉴 건너뛰기




Volumn 28, Issue 4, 2005, Pages 289-301

Estimation of individual admixture: Analytical and study design considerations

Author keywords

Admixture; EM algorithm; Maximum likelihood estimate

Indexed keywords

ALGORITHM; ARTICLE; BAYES THEOREM; ERROR; GENE FREQUENCY; GENETIC ANALYSIS; GENOME ANALYSIS; HUMAN; INDIVIDUALITY; PLESIOMORPHY; POPULATION GENETICS; SIMULATION;

EID: 17644402806     PISSN: 07410395     EISSN: None     Source Type: Journal    
DOI: 10.1002/gepi.20064     Document Type: Article
Times cited : (498)

References (29)
  • 1
    • 2942711612 scopus 로고    scopus 로고
    • Ancestral proportions and their association with skin pigmentation and bone mineral density in Puerto Rican women from New York city
    • Bonilla C, Shriver MD, Parra EJ, Jones A, Fernandez JR. 2004. Ancestral proportions and their association with skin pigmentation and bone mineral density in Puerto Rican women from New York city. Hum Genet 115:57-68.
    • (2004) Hum Genet , vol.115 , pp. 57-68
    • Bonilla, C.1    Shriver, M.D.2    Parra, E.J.3    Jones, A.4    Fernandez, J.R.5
  • 3
    • 0034918729 scopus 로고    scopus 로고
    • Estimation of admixture proportions: A likelihood-based approach using Markov chain Monte Carlo
    • Chikhi L, Bruford MW, Beaumont MA. 2001. Estimation of admixture proportions: a likelihood-based approach using Markov chain Monte Carlo. Genetics 158:1347-1362.
    • (2001) Genetics , vol.158 , pp. 1347-1362
    • Chikhi, L.1    Bruford, M.W.2    Beaumont, M.A.3
  • 5
    • 0002629270 scopus 로고
    • Maximum likelihood from incomplete data via the EM algorithm
    • Dempster AP, Laird NM, Rubin DB. 1977. Maximum likelihood from incomplete data via the EM algorithm. JRSS B 39:1-38.
    • (1977) JRSS B , vol.39 , pp. 1-38
    • Dempster, A.P.1    Laird, N.M.2    Rubin, D.B.3
  • 7
    • 0041817568 scopus 로고    scopus 로고
    • Inference of population structure: Extensions to linked loci and correlated allele frequencies
    • Falush D, Stephens M, Pritchard JK. 2003. Inference of population structure: extensions to linked loci and correlated allele frequencies. Genetics 164:1567-1587.
    • (2003) Genetics , vol.164 , pp. 1567-1587
    • Falush, D.1    Stephens, M.2    Pritchard, J.K.3
  • 8
    • 0022468357 scopus 로고
    • Individual admixture estimates: Disease associations and individual risk of diabetes and gallbladder disease among Mexican-Americans in Starr County, Texas
    • Hanis CL, Chakraborty R, Ferrell RE, Schull WJ. 1986. Individual admixture estimates: disease associations and individual risk of diabetes and gallbladder disease among Mexican-Americans in Starr County, Texas. Am J Phys Anthropol 70:433-441.
    • (1986) Am J Phys Anthropol , vol.70 , pp. 433-441
    • Hanis, C.L.1    Chakraborty, R.2    Ferrell, R.E.3    Schull, W.J.4
  • 12
    • 0036184745 scopus 로고    scopus 로고
    • Generating samples under a Wright-Fisher neutral model of genetic variation
    • Hudson, RR. 2002. Generating samples under a Wright-Fisher neutral model of genetic variation. Bioinformatics 18:337-338.
    • (2002) Bioinformatics , vol.18 , pp. 337-338
    • Hudson, R.R.1
  • 15
    • 0026030165 scopus 로고
    • The genetic structure of admixed populations
    • Long JC. 1991. The genetic structure of admixed populations. Genetics 127:417-428.
    • (1991) Genetics , vol.127 , pp. 417-428
    • Long, J.C.1
  • 20
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard JK, Stephens M, Donnelly P. 2000. Inference of population structure using multilocus genotype data. Genetics 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 21
    • 0030928378 scopus 로고    scopus 로고
    • Seq-Gen: An application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees
    • Rambaut A, Crassly NC. 1997. Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees. Comput Appl Biosci 13:235-238.
    • (1997) Comput Appl Biosci , vol.13 , pp. 235-238
    • Rambaut, A.1    Crassly, N.C.2
  • 23
    • 0347362518 scopus 로고    scopus 로고
    • Informativeness of genetic markers for inference of ancestry
    • Rosenberg NA, Li LM, Ward R, Pritchard JK. 2003. Informativeness of genetic markers for inference of ancestry. Am J Hum Genet 73:1402-1422.
    • (2003) Am J Hum Genet , vol.73 , pp. 1402-1422
    • Rosenberg, N.A.1    Li, L.M.2    Ward, R.3    Pritchard, J.K.4
  • 26
    • 0038124411 scopus 로고    scopus 로고
    • Maximum-likelihood estimation of admixture proportions from genetic data
    • Wang J. 2003. Maximum-likelihood estimation of admixture proportions from genetic data. Genetics 164:747-765.
    • (2003) Genetics , vol.164 , pp. 747-765
    • Wang, J.1
  • 27
    • 0035228946 scopus 로고    scopus 로고
    • Genotyping for human whole-genome scans: Past, present, and future
    • Weber JL, Broman KW. 2001. Genotyping for human whole-genome scans: past, present, and future. Adv Genet 42:77-96.
    • (2001) Adv Genet , vol.42 , pp. 77-96
    • Weber, J.L.1    Broman, K.W.2
  • 28
    • 2442688965 scopus 로고    scopus 로고
    • Linkage analysis of a complex disease through use of admixed populations
    • Zhu X, Cooper RS, Elston RC. 2004. Linkage analysis of a complex disease through use of admixed populations. Am J Hum Genet 74:1136-1153.
    • (2004) Am J Hum Genet , vol.74 , pp. 1136-1153
    • Zhu, X.1    Cooper, R.S.2    Elston, R.C.3
  • 29
    • 0038445961 scopus 로고    scopus 로고
    • Human population structure and genetic association studies
    • Ziv E, Burchard EG. 2003. Human population structure and genetic association studies. Pharmacogenomics 4:431-441.
    • (2003) Pharmacogenomics , vol.4 , pp. 431-441
    • Ziv, E.1    Burchard, E.G.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.