-
2
-
-
84862141704
-
Human gut microbiome viewed across age and geography
-
Yatsunenko T, Rey FE, Manary MJ, et al. (2012) Human gut microbiome viewed across age and geography. Nature 486, 222-227.
-
(2012)
Nature
, vol.486
, pp. 222-227
-
-
Yatsunenko, T.1
Rey, F.E.2
Manary, M.J.3
-
3
-
-
33144460422
-
Differences in fecal microbiota in different European study populations in relation to age, gender, and country: A cross-sectional study
-
Mueller S, Saunier K, Hanisch C, et al. (2005) Differences in fecal microbiota in different European study populations in relation to age, gender, and country: a cross-sectional study. Appl Environ Microbiol 72, 1027-1033.
-
(2005)
Appl Environ Microbiol
, vol.72
, pp. 1027-1033
-
-
Mueller, S.1
Saunier, K.2
Hanisch, C.3
-
4
-
-
56849106496
-
The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing
-
Dethlefsen L, Huse SM, Relman DA, et al. (2008) The pervasive effects of an antibiotic on the human gut microbiota, as revealed by deep 16S rRNA sequencing. PLoS Biol 6, e1000255.
-
(2008)
PLoS Biol
, vol.6
, pp. e1000255
-
-
Dethlefsen, L.1
Huse, S.M.2
Relman, D.A.3
-
5
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
Wu GD, Chen J, Hoffmann C, et al. (2011) Linking long-term dietary patterns with gut microbial enterotypes. Science 334, 105-108.
-
(2011)
Science
, vol.334
, pp. 105-108
-
-
Wu, G.D.1
Chen, J.2
Hoffmann, C.3
-
6
-
-
84892828465
-
Diet rapidly and reproducibly alters the human gut microbiome
-
David LA, Maurice CF, Carmody RN, et al. (2013) Diet rapidly and reproducibly alters the human gut microbiome. Nature 505, 559-563.
-
(2013)
Nature
, vol.505
, pp. 559-563
-
-
David, L.A.1
Maurice, C.F.2
Carmody, R.N.3
-
7
-
-
84907855825
-
The influence of whole grain products and red meat on intestinal microbiota composition in normal weight adults: A randomized crossover intervention trial
-
Foerster J, Maskarinec G, Reichardt N, et al. (2014) The influence of whole grain products and red meat on intestinal microbiota composition in normal weight adults: a randomized crossover intervention trial. PLOS ONE 9, e109606.
-
(2014)
PLOS ONE
, vol.9
, pp. e109606
-
-
Foerster, J.1
Maskarinec, G.2
Reichardt, N.3
-
8
-
-
84860260510
-
Trends in dietary fiber intake in the United States, 1999-2008
-
King DE, Mainous AG &Lambourne CA (2012) Trends in dietary fiber intake in the United States, 1999-2008. J Acad Nutr Diet 112, 642-648.
-
(2012)
J Acad Nutr Diet
, vol.112
, pp. 642-648
-
-
King, D.E.1
Mainous, A.G.2
Lambourne, C.A.3
-
9
-
-
85054052536
-
-
Ministry of Health (2015) Eating and Activity Guidelines for New Zealand Adults. Wellington, New Zealand: Ministry of Health
-
Ministry of Health (2015) Eating and Activity Guidelines for New Zealand Adults. Wellington, New Zealand: Ministry of Health.
-
-
-
-
10
-
-
85027283029
-
The international scientific association for probiotics and prebiotics (isapp) consensus statement on the definition and scope of prebiotics
-
Gibson GR, Hutkins R, Sanders ME, et al. (2017) The International Scientific Association for Probiotics and Prebiotics (ISAPP) consensus statement on the definition and scope of prebiotics. Nat Rev Gastroenterol Hepatol 14, 491-502.
-
(2017)
Nat Rev Gastroenterol Hepatol
, vol.14
, pp. 491-502
-
-
Gibson, G.R.1
Hutkins, R.2
Sanders, M.E.3
-
11
-
-
84955709661
-
Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults
-
Tap J, Furet JP, Bensaada M, et al. (2015) Gut microbiota richness promotes its stability upon increased dietary fibre intake in healthy adults. Environ Microbiol 17, 4954-4964.
-
(2015)
Environ Microbiol
, vol.17
, pp. 4954-4964
-
-
Tap, J.1
Furet, J.P.2
Bensaada, M.3
-
12
-
-
0034808582
-
A human volunteer study on the prebiotic effects of HP-inulin-faecal bacteria enumerated using fluorescent in situ hybridisation (FISH)
-
Tuohy KM, Finlay RK, Wynne AG, et al. (2001) A human volunteer study on the prebiotic effects of HP-inulin-faecal bacteria enumerated using fluorescent in situ hybridisation (FISH). Anaerobe 7, 113-118.
-
(2001)
Anaerobe
, vol.7
, pp. 113-118
-
-
Tuohy, K.M.1
Finlay, R.K.2
Wynne, A.G.3
-
13
-
-
0034808152
-
The prebiotic effects of biscuits containing partially hydrolysed guar gum and fructo-oligosaccharides-A human volunteer study
-
Tuohy KM, Kolida S, Lustenberger AM, et al. (2001) The prebiotic effects of biscuits containing partially hydrolysed guar gum and fructo-oligosaccharides-A human volunteer study. Br J Nutr 86, 341-348.
-
(2001)
Br J Nutr
, vol.86
, pp. 341-348
-
-
Tuohy, K.M.1
Kolida, S.2
Lustenberger, A.M.3
-
14
-
-
39749160044
-
Baseline microbiota activity and initial bifidobacteria counts influence responses to prebiotic dosing in healthy subjects
-
de Preter V, Vanhoutte T, Huys G, et al. (2008) Baseline microbiota activity and initial bifidobacteria counts influence responses to prebiotic dosing in healthy subjects. Aliment Pharmacol Ther 27, 504-513.
-
(2008)
Aliment Pharmacol Ther
, vol.27
, pp. 504-513
-
-
De Preter, V.1
Vanhoutte, T.2
Huys, G.3
-
15
-
-
34948828520
-
A double-blind placebo-controlled study to establish the bifidogenic dose of inulin in healthy humans
-
Kolida S, Meyer D &Gibson GR (2007) A double-blind placebo-controlled study to establish the bifidogenic dose of inulin in healthy humans. Eur J Clin Nutr 61, 1189-1195.
-
(2007)
Eur J Clin Nutr
, vol.61
, pp. 1189-1195
-
-
Kolida, S.1
Meyer, D.2
Gibson, G.R.3
-
16
-
-
34047273963
-
Prolonged administration of low-dose inulin stimulates the growth of bifidobacteria in humans
-
Bouhnik Y, Raskine L, Champion K, et al. (2007) Prolonged administration of low-dose inulin stimulates the growth of bifidobacteria in humans. Nutr Res 27, 187-193.
-
(2007)
Nutr Res
, vol.27
, pp. 187-193
-
-
Bouhnik, Y.1
Raskine, L.2
Champion, K.3
-
17
-
-
84944096442
-
Impact of palm date consumption on microbiota growth and large intestinal health: A randomised, controlled, cross-over, human intervention study
-
Eid N, Osmanova H, Natchez C, et al. (2015) Impact of palm date consumption on microbiota growth and large intestinal health: a randomised, controlled, cross-over, human intervention study. Br J Nutr 114, 1226-1236.
-
(2015)
Br J Nutr
, vol.114
, pp. 1226-1236
-
-
Eid, N.1
Osmanova, H.2
Natchez, C.3
-
18
-
-
85009377539
-
Prior dietary practices and connections to a human gut microbial metacommunity alter responses to diet interventions
-
Griffin NW, Ahern PP, Cheng J, et al. (2017) Prior dietary practices and connections to a human gut microbial metacommunity alter responses to diet interventions. Cell Host Microbe 21, 84-96.
-
(2017)
Cell Host Microbe
, vol.21
, pp. 84-96
-
-
Griffin, N.W.1
Ahern, P.P.2
Cheng, J.3
-
19
-
-
84985949317
-
Influence of habitual dietary fibre intake on the responsiveness of the gut microbiota to a prebiotic: Protocol for a randomised, double-blind, placebo-controlled, cross-over, single-centre study
-
Healey G, Brough L, Butts C, et al. (2016) Influence of habitual dietary fibre intake on the responsiveness of the gut microbiota to a prebiotic: protocol for a randomised, double-blind, placebo-controlled, cross-over, single-centre study. BMJ Open 6, e012504.
-
(2016)
BMJ Open
, vol.6
, pp. e012504
-
-
Healey, G.1
Brough, L.2
Butts, C.3
-
20
-
-
84987729388
-
Validity and reproducibility of a habitual dietary fibre intake short food frequency questionnaire
-
Healey G, Brough L, Murphy R, et al. (2016) Validity and reproducibility of a habitual dietary fibre intake short food frequency questionnaire. Nutrients 8, 3-9.
-
(2016)
Nutrients
, vol.8
, pp. 3-9
-
-
Healey, G.1
Brough, L.2
Murphy, R.3
-
21
-
-
33645765151
-
-
Ministry of Health &Department of Health and Ageing Canberra, Australia: Ministry of Health &Department of Health and Ageing
-
Ministry of Health &Department of Health and Ageing (2006) Nutrient Reference Values for Australia and New Zealand-Executive Summary. Canberra, Australia: Ministry of Health &Department of Health and Ageing.
-
(2006)
Nutrient Reference Values for Australia and New Zealand-Executive Summary
-
-
-
23
-
-
79952455804
-
Validation of a food frequency questionnaire to measure intakes of inulin and oligofructose
-
Dunn S, Datta A, Kallis S, et al. (2011) Validation of a food frequency questionnaire to measure intakes of inulin and oligofructose. Eur J Clin Nutr 65, 402-408.
-
(2011)
Eur J Clin Nutr
, vol.65
, pp. 402-408
-
-
Dunn, S.1
Datta, A.2
Kallis, S.3
-
24
-
-
0029401368
-
On the presence of inulin and oligofructose as natural ingredients in the western diet
-
van Loo J, Coussement P, de Leenheer L, et al. (1995) On the presence of inulin and oligofructose as natural ingredients in the western diet. Crit Rev Food Sci Nutr 35, 525-552.
-
(1995)
Crit Rev Food Sci Nutr
, vol.35
, pp. 525-552
-
-
Van Loo, J.1
Coussement, P.2
De Leenheer, L.3
-
25
-
-
0032970095
-
Presence of inulin and oligofructose in the diets of Americans
-
Moshfegh AJ, Friday JE, Goldman JP, et al. (1999) Presence of inulin and oligofructose in the diets of Americans. J Nutr 129, 1407S-1411S.
-
(1999)
J Nutr
, vol.129
, pp. 1407S-1411S
-
-
Moshfegh, A.J.1
Friday, J.E.2
Goldman, J.P.3
-
27
-
-
0033963963
-
Reproducibility, power and validity of visual analogue scales in assessment of appetite sensations in single test meal studies
-
Flint A, Raben A, Blundell JE, et al. (2000) Reproducibility, power and validity of visual analogue scales in assessment of appetite sensations in single test meal studies. Int J Obes 24, 38-48.
-
(2000)
J Obes
, vol.24
, pp. 38-48
-
-
Flint, A.1
Raben, A.2
Blundell, J.E.3
-
28
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, et al. (2010) QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7, 335-336.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
-
30
-
-
77957244650
-
Search and clustering orders of magnitude faster than BLAST
-
Edgar RC (2010) Search and clustering orders of magnitude faster than BLAST. Bioinformatics 26, 2460-2461.
-
(2010)
Bioinformatics
, vol.26
, pp. 2460-2461
-
-
Edgar, R.C.1
-
31
-
-
33746061683
-
Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB
-
DeSantis TZ, Hugenholtz P, Larsen N, et al. (2006) Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB. Appl Environ Microbiol 72, 5069-5072.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 5069-5072
-
-
DeSantis, T.Z.1
Hugenholtz, P.2
Larsen, N.3
-
32
-
-
34548293679
-
Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy
-
Wang Q, Garrity GM, Tiedje JM, et al. (2007) Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy. Appl Environ Microbiol 73, 5261-5267.
-
(2007)
Appl Environ Microbiol
, vol.73
, pp. 5261-5267
-
-
Wang, Q.1
Garrity, G.M.2
Tiedje, J.M.3
-
33
-
-
0029776072
-
Specific detection and analysis of a probiotic Bifidobacterium strain in infant feces
-
Kok RG, Waal ADE, Schut F, et al. (1996) Specific detection and analysis of a probiotic Bifidobacterium strain in infant feces. Appl Environ Microbiol 62, 68-3672.
-
(1996)
Appl Environ Microbiol
, vol.62
, pp. 68-3672
-
-
Kok, R.G.1
Waal, A.D.E.2
Schut, F.3
-
34
-
-
0024311277
-
Simultaneous determination of volatile and non-volatile acidic fermentation products of anaerobes by capillary gas chromatography
-
Richardson AJ, Calder AG, Stewart CS, et al. (1989) Simultaneous determination of volatile and non-volatile acidic fermentation products of anaerobes by capillary gas chromatography. Lett Appl Microbiol 9, 5-8.
-
(1989)
Lett Appl Microbiol
, vol.9
, pp. 5-8
-
-
Richardson, A.J.1
Calder, A.G.2
Stewart, C.S.3
-
35
-
-
84941065503
-
Agave inulin supplementation affects the fecal microbiota of healthy adults participating in a randomized, double-blind, placebocontrolled, crossover trial
-
Holscher HD, Bauer LL, Gourineni V, et al. (2015) Agave inulin supplementation affects the fecal microbiota of healthy adults participating in a randomized, double-blind, placebocontrolled, crossover trial. J Nutr 145, 2025-2032.
-
(2015)
J Nutr
, vol.145
, pp. 2025-2032
-
-
Holscher, H.D.1
Bauer, L.L.2
Gourineni, V.3
-
36
-
-
84880270337
-
Insight into the prebiotic concept: Lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women
-
Dewulf EM, Cani PD, Claus SP, et al. (2013) Insight into the prebiotic concept: lessons from an exploratory, double blind intervention study with inulin-type fructans in obese women. Gut 62, 1112-1121.
-
(2013)
Gut
, vol.62
, pp. 1112-1121
-
-
Dewulf, E.M.1
Cani, P.D.2
Claus, S.P.3
-
37
-
-
63849164050
-
Effect of inulin on the human gut microbiota: Stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii
-
Ramirez-Farias C, Slezak K, Fuller Z, et al. (2009) Effect of inulin on the human gut microbiota: stimulation of Bifidobacterium adolescentis and Faecalibacterium prausnitzii. Br J Nutr 101, 541-550.
-
(2009)
Br J Nutr
, vol.101
, pp. 541-550
-
-
Ramirez-Farias, C.1
Slezak, K.2
Fuller, Z.3
-
38
-
-
77957919545
-
A double-blind, placebo-controlled, cross-over study to establish the bifidogenic effect of a very-long-chain inulin extracted from globe artichoke (Cynara scolymus) in healthy human subjects
-
Costabile A, Kolida S, Klinder A, et al. (2010) A double-blind, placebo-controlled, cross-over study to establish the bifidogenic effect of a very-long-chain inulin extracted from globe artichoke (Cynara scolymus) in healthy human subjects. Br J Nutr 104, 1007-1017.
-
(2010)
Br J Nutr
, vol.104
, pp. 1007-1017
-
-
Costabile, A.1
Kolida, S.2
Klinder, A.3
-
39
-
-
77955299181
-
Prebiotic effect of fruit and vegetable shots containing Jerusalem artichoke inulin: A human intervention study
-
Ramnani P, Gaudier E, Bingham M, et al. (2010) Prebiotic effect of fruit and vegetable shots containing Jerusalem artichoke inulin: a human intervention study. Br J Nutr 104, 233-240.
-
(2010)
Br J Nutr
, vol.104
, pp. 233-240
-
-
Ramnani, P.1
Gaudier, E.2
Bingham, M.3
-
40
-
-
84891485214
-
Prebiotic stimulation of human colonic butyrate-producing bacteria and bifidobacteria, in vitro
-
Scott KP, Martin JC, Duncan SH, et al. (2014) Prebiotic stimulation of human colonic butyrate-producing bacteria and bifidobacteria, in vitro. Microbiol Ecol 87, 30-40.
-
(2014)
Microbiol Ecol
, vol.87
, pp. 30-40
-
-
Scott, K.P.1
Martin, J.C.2
Duncan, S.H.3
-
41
-
-
84941914164
-
In vitro effects of dietary inulin on human fecal microbiota and butyrate production
-
Jung T-H, Jeon W-M &Han K-S (2015) In vitro effects of dietary inulin on human fecal microbiota and butyrate production. J Microbiol Biotechnol 25, 1555-1558.
-
(2015)
J Microbiol Biotechnol
, vol.25
, pp. 1555-1558
-
-
Jung, T.-H.1
Jeon, W.-M.2
Han, K.-S.3
-
42
-
-
0028126050
-
Effects of short chain fatty acids on gut morphology and function
-
Scheppach W (1994) Effects of short chain fatty acids on gut morphology and function. Gut 35, 1 Suppl., S35-S38.
-
(1994)
Gut
, vol.35
, Issue.1
, pp. S35-S38
-
-
Scheppach, W.1
-
43
-
-
33646585117
-
Two routes of metabolic cross-feeding between Bifidobacterium adolescentis and butyrate-producing anaerobes from the human gut
-
Belenguer A, Duncan SH, Calder AG, et al. (2006) Two routes of metabolic cross-feeding between Bifidobacterium adolescentis and butyrate-producing anaerobes from the human gut. Appl Environ Microbiol 72, 3593-3599.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 3593-3599
-
-
Belenguer, A.1
Duncan, S.H.2
Calder, A.G.3
-
44
-
-
85008970219
-
Impact of dietary pattern of the fecal donor on in vitro fermentation properties of whole grains and brans
-
Brahma S, Martínez I, Walter J, et al. (2017) Impact of dietary pattern of the fecal donor on in vitro fermentation properties of whole grains and brans. J Funct Foods 29, 281-289.
-
(2017)
J Funct Foods
, vol.29
, pp. 281-289
-
-
Brahma, S.1
Martínez, I.2
Walter, J.3
-
45
-
-
85034258758
-
Byproduct cross feeding and community stability in an in silico biofilm model of the gut microbiome
-
Henson MA &Phalak P (2017) Byproduct cross feeding and community stability in an in silico biofilm model of the gut microbiome. Processes 5, 13.
-
(2017)
Processes
, vol.5
, pp. 13
-
-
Henson, M.A.1
Phalak, P.2
-
46
-
-
0015238342
-
Volume and composition of human intestinal gas determined by means of an intestinal washout technic
-
Levitt M (1971) Volume and composition of human intestinal gas determined by means of an intestinal washout technic. N Engl J Med 284, 1394-1398.
-
(1971)
N Engl J Med
, vol.284
, pp. 1394-1398
-
-
Levitt, M.1
-
47
-
-
84859587827
-
Butyrate and propionate protect against diet-induced obesity and regulate gut hormones via free fatty acid receptor 3-independent mechanisms
-
Lin HV, Frassetto A, Kowalik EJ, et al. (2012) Butyrate and propionate protect against diet-induced obesity and regulate gut hormones via free fatty acid receptor 3-independent mechanisms. PLOS ONE 7, e35240.
-
(2012)
PLOS ONE
, vol.7
, pp. e35240
-
-
Lin, H.V.1
Frassetto, A.2
Kowalik, E.J.3
-
48
-
-
77953901767
-
Specificity of polysaccharide use in intestinal bacteroides species determines diet-induced microbiota alterations
-
Sonnenburg ED, Zheng H, Joglekar P, et al. (2010) Specificity of polysaccharide use in intestinal bacteroides species determines diet-induced microbiota alterations. Cell 141, 1241-1252.
-
(2010)
Cell
, vol.141
, pp. 1241-1252
-
-
Sonnenburg, E.D.1
Zheng, H.2
Joglekar, P.3
-
49
-
-
85014021507
-
Prebiotic inulin-type fructans and galacto-oligosaccharides: Definition, specificity, function, and application in gastrointestinal disorders
-
Wilson B &Whelan K (2017) Prebiotic inulin-type fructans and galacto-oligosaccharides: definition, specificity, function, and application in gastrointestinal disorders. J Gastroenterol Hepatol 32, 64-68.
-
(2017)
J Gastroenterol Hepatol
, vol.32
, pp. 64-68
-
-
Wilson, B.1
Whelan, K.2
|