메뉴 건너뛰기




Volumn 26, Issue 16, 2017, Pages 4284-4295

Genomewide patterns of variation in genetic diversity are shared among populations, species and higher-order taxa

Author keywords

background selection; genetic diversity; genetic draft; genetic hitchhiking; linked selection; recombination rate; speciation genetics

Indexed keywords

ANIMAL; BIRD; CLASSIFICATION; EVOLUTION; GENETIC SELECTION; GENETIC VARIATION; PHYLOGENY; POPULATION GENETICS; REPRODUCTIVE ISOLATION;

EID: 85021329776     PISSN: 09621083     EISSN: 1365294X     Source Type: Journal    
DOI: 10.1111/mec.14195     Document Type: Article
Times cited : (59)

References (88)
  • 4
    • 84915768067 scopus 로고    scopus 로고
    • Thinking too positive? Revisiting current methods of population genetic selection inference
    • Bank, C., Ewing, G. B., Ferrer-Admettla, A., Foll, M., & Jensen, J. D. (2014). Thinking too positive? Revisiting current methods of population genetic selection inference. Trends in Genetics, 30, 540–546.
    • (2014) Trends in Genetics , vol.30 , pp. 540-546
    • Bank, C.1    Ewing, G.B.2    Ferrer-Admettla, A.3    Foll, M.4    Jensen, J.D.5
  • 5
    • 0001392664 scopus 로고
    • Multilocus clines
    • Barton, N. H. (1983). Multilocus clines. Evolution, 37, 454–471.
    • (1983) Evolution , vol.37 , pp. 454-471
    • Barton, N.H.1
  • 6
    • 84966160759 scopus 로고
    • The barrier to genetic exchange between hybridising populations
    • Barton, N. H., & Bengtsson, B. O. (1986). The barrier to genetic exchange between hybridising populations. Heredity, 57, 357–376.
    • (1986) Heredity , vol.57 , pp. 357-376
    • Barton, N.H.1    Bengtsson, B.O.2
  • 8
    • 2442590732 scopus 로고    scopus 로고
    • Single-generation estimates of individual fitness as proxies for long-term genetic contribution
    • Brommer, J. E., Gustafsson, L., Pietiäinen, H., & Merilä, J. (2004). Single-generation estimates of individual fitness as proxies for long-term genetic contribution. The American Naturalist, 163, 505–517.
    • (2004) The American Naturalist , vol.163 , pp. 505-517
    • Brommer, J.E.1    Gustafsson, L.2    Pietiäinen, H.3    Merilä, J.4
  • 9
    • 84946553571 scopus 로고    scopus 로고
    • Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers
    • Burri, R., Nater, A., Kawakami, T., Mugal, C. F., Olason, P. I., Smeds, L., … Ellegren, H. (2015). Linked selection and recombination rate variation drive the evolution of the genomic landscape of differentiation across the speciation continuum of Ficedula flycatchers. Genome Research, 25, 1656–1665.
    • (2015) Genome Research , vol.25 , pp. 1656-1665
    • Burri, R.1    Nater, A.2    Kawakami, T.3    Mugal, C.F.4    Olason, P.I.5    Smeds, L.6    Ellegren, H.7
  • 11
    • 62449199004 scopus 로고    scopus 로고
    • Recombination and speciation: Loci near centromeres are more differentiated than loci near telomeres between subspecies of the European rabbit (Oryctolagus cuniculus)
    • Carneiro, M., Nuno, F., & Nachman, M. W. (2009). Recombination and speciation: Loci near centromeres are more differentiated than loci near telomeres between subspecies of the European rabbit (Oryctolagus cuniculus). Genetics, 181, 593–606.
    • (2009) Genetics , vol.181 , pp. 593-606
    • Carneiro, M.1    Nuno, F.2    Nachman, M.W.3
  • 12
    • 84872036603 scopus 로고    scopus 로고
    • Genome-wide fine-scale recombination rate variation in Drosophila melanogaster
    • Chan, A. H., Jenkins, P. A., & Song, Y. S. (2012). Genome-wide fine-scale recombination rate variation in Drosophila melanogaster. PLOS Genetics, 8, e1003090.
    • (2012) PLOS Genetics , vol.8
    • Chan, A.H.1    Jenkins, P.A.2    Song, Y.S.3
  • 13
    • 0028222304 scopus 로고
    • The effect of background selection against deleterious mutations on weakly selected, linked variants
    • Charlesworth, B. (1994). The effect of background selection against deleterious mutations on weakly selected, linked variants. Genetical Research, 63, 213–227.
    • (1994) Genetical Research , vol.63 , pp. 213-227
    • Charlesworth, B.1
  • 14
    • 0031901554 scopus 로고    scopus 로고
    • Measures of divergence between populations and the effect of forces that reduce variability
    • Charlesworth, B. (1998). Measures of divergence between populations and the effect of forces that reduce variability. Molecular Biology and Evolution, 15, 538–543.
    • (1998) Molecular Biology and Evolution , vol.15 , pp. 538-543
    • Charlesworth, B.1
  • 15
    • 0027305597 scopus 로고
    • The effect of deleterious mutations on neutral molecular variation
    • Charlesworth, B., Morgan, M. T., & Charlesworth, D. (1993). The effect of deleterious mutations on neutral molecular variation. Genetics, 134, 1289–1303.
    • (1993) Genetics , vol.134 , pp. 1289-1303
    • Charlesworth, B.1    Morgan, M.T.2    Charlesworth, D.3
  • 16
    • 84975064982 scopus 로고    scopus 로고
    • Does linked selection explain the narrow range of genetic diversity across species?
    • 042598
    • Coop, G. (2016). Does linked selection explain the narrow range of genetic diversity across species?. bioRxiv, 042598. https://doi.org/10.1101/042598
    • (2016) bioRxiv
    • Coop, G.1
  • 17
    • 84929497425 scopus 로고    scopus 로고
    • Natural selection constrains neutral diversity across a wide range of species
    • Corbett-Detig, R. B., Hartl, D. L., & Sackton, T. B. (2015). Natural selection constrains neutral diversity across a wide range of species. PLoS Biology, 13, e1002112.
    • (2015) PLoS Biology , vol.13
    • Corbett-Detig, R.B.1    Hartl, D.L.2    Sackton, T.B.3
  • 18
    • 84903376433 scopus 로고    scopus 로고
    • Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow
    • Cruickshank, T. E., & Hahn, M. W. (2014). Reanalysis suggests that genomic islands of speciation are due to reduced diversity, not reduced gene flow. Molecular Ecology, 23, 3133–3157.
    • (2014) Molecular Ecology , vol.23 , pp. 3133-3157
    • Cruickshank, T.E.1    Hahn, M.W.2
  • 19
    • 84875230189 scopus 로고    scopus 로고
    • Genomic signatures of selection at linked sites: Unifying the disparity among species
    • Cutter, A. D., & Payseur, B. A. (2013). Genomic signatures of selection at linked sites: Unifying the disparity among species. Nature Reviews. Genetics, 14, 262–274.
    • (2013) Nature Reviews. Genetics , vol.14 , pp. 262-274
    • Cutter, A.D.1    Payseur, B.A.2
  • 20
    • 84926528889 scopus 로고    scopus 로고
    • Genomic analysis of a migratory divide reveals candidate genes for migration and implicates selective sweeps in generating Islands of differentiation
    • Delmore, K. E., Hübner, S., Kane, N. C., Schuster, R., Andrew, R. L., Câmara, F., … Irwin, D. E. (2015). Genomic analysis of a migratory divide reveals candidate genes for migration and implicates selective sweeps in generating Islands of differentiation. Molecular Ecology, 24, 1873–1888.
    • (2015) Molecular Ecology , vol.24 , pp. 1873-1888
    • Delmore, K.E.1    Hübner, S.2    Kane, N.C.3    Schuster, R.4    Andrew, R.L.5    Câmara, F.6    Irwin, D.E.7
  • 21
  • 22
    • 34249875966 scopus 로고    scopus 로고
    • Incipient speciation by divergent adaptation and antagonistic Epistasis in yeast
    • Dettman, J. R., Sirjusingh, C., Kohn, L. M., & Anderson, J. B. (2007). Incipient speciation by divergent adaptation and antagonistic Epistasis in yeast. Nature, 447, 585–588.
    • (2007) Nature , vol.447 , pp. 585-588
    • Dettman, J.R.1    Sirjusingh, C.2    Kohn, L.M.3    Anderson, J.B.4
  • 23
    • 85012991893 scopus 로고    scopus 로고
    • Covariation in levels of nucleotide diversity in homologous regions of the avian genome long after completion of lineage sorting
    • Dutoit, L., Vijay, N., Mugal, C. F., Bossu, C. M., Burri, R., Wolf, J., & Ellegren, H. (2017). Covariation in levels of nucleotide diversity in homologous regions of the avian genome long after completion of lineage sorting. Proceedings of the Royal Society. Series B, 284, 20162756.
    • (2017) Proceedings of the Royal Society. Series B , vol.284 , pp. 20162756
    • Dutoit, L.1    Vijay, N.2    Mugal, C.F.3    Bossu, C.M.4    Burri, R.5    Wolf, J.6    Ellegren, H.7
  • 24
    • 77950630372 scopus 로고    scopus 로고
    • Evolutionary stasis: The stable chromosomes of birds
    • Ellegren, H. (2010). Evolutionary stasis: The stable chromosomes of birds. Trends in Ecology & Evolution, 25, 283–291.
    • (2010) Trends in Ecology & Evolution , vol.25 , pp. 283-291
    • Ellegren, H.1
  • 25
    • 84973319914 scopus 로고    scopus 로고
    • Determinants of genetic diversity
    • Ellegren, H., & Galtier, N. (2016). Determinants of genetic diversity. Nature Reviews Genetics, 17, 422–433.
    • (2016) Nature Reviews Genetics , vol.17 , pp. 422-433
    • Ellegren, H.1    Galtier, N.2
  • 27
    • 33745948556 scopus 로고    scopus 로고
    • Higher-level phylogeny and morphological evolution of Tyrant Flycatchers, Cotingas, Manakins, and Their allies (Aves: Tyrannida)
    • Ericson, P. G. P., Zuccon, D., Ohlson, J. I., Johansson, U. S., Alvarenga, H., & Prum, R. O. (2006). Higher-level phylogeny and morphological evolution of Tyrant Flycatchers, Cotingas, Manakins, and Their allies (Aves: Tyrannida). Molecular Phylogenetics and Evolution, 40, 471–483.
    • (2006) Molecular Phylogenetics and Evolution , vol.40 , pp. 471-483
    • Ericson, P.G.P.1    Zuccon, D.2    Ohlson, J.I.3    Johansson, U.S.4    Alvarenga, H.5    Prum, R.O.6
  • 28
    • 84954077710 scopus 로고    scopus 로고
    • The consequences of not accounting for background selection in demographic inference
    • Ewing, G. B., & Jensen, J. D. (2016). The consequences of not accounting for background selection in demographic inference. Molecular Ecology, 25, 135–141.
    • (2016) Molecular Ecology , vol.25 , pp. 135-141
    • Ewing, G.B.1    Jensen, J.D.2
  • 29
    • 34447546660 scopus 로고    scopus 로고
    • The distribution of fitness effects of new mutations
    • Eyre-Walker, A., & Keightley, P. D. (2007). The distribution of fitness effects of new mutations. Nature Reviews Genetics, 8, 610–618.
    • (2007) Nature Reviews Genetics , vol.8 , pp. 610-618
    • Eyre-Walker, A.1    Keightley, P.D.2
  • 30
    • 79955625454 scopus 로고    scopus 로고
    • Bayesian estimation of genomic clines
    • Gompert, Z., & Buerkle, C. A. (2011). Bayesian estimation of genomic clines. Molecular Ecology, 20, 2111–2127.
    • (2011) Molecular Ecology , vol.20 , pp. 2111-2127
    • Gompert, Z.1    Buerkle, C.A.2
  • 31
    • 14844359279 scopus 로고    scopus 로고
    • Hierfstat, a package for R to compute and test hierarchical F-statistics
    • Goudet, J. (2005). Hierfstat, a package for R to compute and test hierarchical F-statistics. Molecular Ecology Notes, 5, 184–186.
    • (2005) Molecular Ecology Notes , vol.5 , pp. 184-186
    • Goudet, J.1
  • 32
    • 0026615320 scopus 로고
    • Hybridization of bird species
    • Grant, P. R., & Grant, B. R. (1992). Hybridization of bird species. Science, 256, 193–197.
    • (1992) Science , vol.256 , pp. 193-197
    • Grant, P.R.1    Grant, B.R.2
  • 35
    • 80054760378 scopus 로고    scopus 로고
    • Variation in the mutation rate across mammalian genomes
    • Hodgkinson, A., & Eyre-Walker, A. (2011). Variation in the mutation rate across mammalian genomes. Nature Reviews Genetics, 12, 756–766.
    • (2011) Nature Reviews Genetics , vol.12 , pp. 756-766
    • Hodgkinson, A.1    Eyre-Walker, A.2
  • 36
    • 84927912146 scopus 로고    scopus 로고
    • Rates of karyotypic evolution in Estrildid finches differ between island and continental clades
    • Hooper, D. M., & Price, T. D. (2015). Rates of karyotypic evolution in Estrildid finches differ between island and continental clades. Evolution, 69, 890–903.
    • (2015) Evolution , vol.69 , pp. 890-903
    • Hooper, D.M.1    Price, T.D.2
  • 38
    • 0036695118 scopus 로고    scopus 로고
    • Mathematical consequences of the genealogical species concept
    • Hudson, R. R., & Coyne, J. A. (2002). Mathematical consequences of the genealogical species concept. Evolution, 56, 1557–1565.
    • (2002) Evolution , vol.56 , pp. 1557-1565
    • Hudson, R.R.1    Coyne, J.A.2
  • 39
    • 84917708482 scopus 로고    scopus 로고
    • Whole-genome analyses resolve early branches in the tree of life of modern birds
    • Jarvis, E. D., Mirarab, S., Aberer, A. J., Li, B., Houde, P., Li, C., … Zhang, G. (2014). Whole-genome analyses resolve early branches in the tree of life of modern birds. Science, 346, 1320–1331.
    • (2014) Science , vol.346 , pp. 1320-1331
    • Jarvis, E.D.1    Mirarab, S.2    Aberer, A.J.3    Li, B.4    Houde, P.5    Li, C.6    Zhang, G.7
  • 40
    • 84869088692 scopus 로고    scopus 로고
    • The global diversity of birds in space and time
    • Jetz, W., Thomas, G. H., Joy, J. B., Hartmann, K., & Mooers, A. O. (2012). The global diversity of birds in space and time. Nature, 491, 444–448.
    • (2012) Nature , vol.491 , pp. 444-448
    • Jetz, W.1    Thomas, G.H.2    Joy, J.B.3    Hartmann, K.4    Mooers, A.O.5
  • 41
  • 43
    • 85021792111 scopus 로고    scopus 로고
    • Whole-genome patterns of linkage disequilibrium across flycatcher populations clarify the causes and consequences of fine-scale recombination rate variation in Birds
    • Kawakami, T., Mugal, C. F., Suh, A., Nater, A., Burri, R., Smeds, L., & Ellegren, H. (2017). Whole-genome patterns of linkage disequilibrium across flycatcher populations clarify the causes and consequences of fine-scale recombination rate variation in Birds. Molecular Ecology, https://doi.org/10.1111/mec.14197.
    • (2017) Molecular Ecology
    • Kawakami, T.1    Mugal, C.F.2    Suh, A.3    Nater, A.4    Burri, R.5    Smeds, L.6    Ellegren, H.7
  • 44
    • 84905465421 scopus 로고    scopus 로고
    • A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution
    • Kawakami, T., Smeds, L., Backström, N., Husby, A., Qvarnström, A., Mugal, C. F., … Ellegren, H. (2014). A high-density linkage map enables a second-generation collared flycatcher genome assembly and reveals the patterns of avian recombination rate variation and chromosomal evolution. Molecular Ecology, 23, 4035–4058.
    • (2014) Molecular Ecology , vol.23 , pp. 4035-4058
    • Kawakami, T.1    Smeds, L.2    Backström, N.3    Husby, A.4    Qvarnström, A.5    Mugal, C.F.6    Ellegren, H.7
  • 45
    • 84949752843 scopus 로고    scopus 로고
    • Mapping centromeres of microchromosomes in the zebra finch (Taeniopygia Guttata) using half-tetrad analysis
    • Knief, U., & Forstmeier, W. (2016). Mapping centromeres of microchromosomes in the zebra finch (Taeniopygia Guttata) using half-tetrad analysis. Chromosoma, 125, 757–768.
    • (2016) Chromosoma , vol.125 , pp. 757-768
    • Knief, U.1    Forstmeier, W.2
  • 46
    • 84928993364 scopus 로고    scopus 로고
    • The functional basis of wing patterning in Heliconius butterflies: The molecules behind mimicry
    • Kronforst, M. R., & Papa, R. (2015). The functional basis of wing patterning in Heliconius butterflies: The molecules behind mimicry. Genetics, 200, 1–19.
    • (2015) Genetics , vol.200 , pp. 1-19
    • Kronforst, M.R.1    Papa, R.2
  • 49
    • 0015879546 scopus 로고
    • Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms
    • Lewontin, R. C., & Krakauer, J. (1973). Distribution of gene frequency as a test of the theory of the selective neutrality of polymorphisms. Genetics, 74, 175–195.
    • (1973) Genetics , vol.74 , pp. 175-195
    • Lewontin, R.C.1    Krakauer, J.2
  • 50
    • 33947277824 scopus 로고    scopus 로고
    • Natural hybridization in Heliconiine butterflies: The species boundary as a continuum
    • Mallet, J., Beltrán, M., Neukirchen, W., & Linares, M. (2007). Natural hybridization in Heliconiine butterflies: The species boundary as a continuum. BMC Evolutionary Biology, 7, 28.
    • (2007) BMC Evolutionary Biology , vol.7 , pp. 28
    • Mallet, J.1    Beltrán, M.2    Neukirchen, W.3    Linares, M.4
  • 51
    • 85016172201 scopus 로고    scopus 로고
    • Selective sweeps across twenty millions years of primate evolution
    • Munch, K., Nam, K., Schierup, M. H., & Mailund, T. (2016). Selective sweeps across twenty millions years of primate evolution. Molecular Biology and Evolution, 33, 3065–3074.
    • (2016) Molecular Biology and Evolution , vol.33 , pp. 3065-3074
    • Munch, K.1    Nam, K.2    Schierup, M.H.3    Mailund, T.4
  • 53
    • 84888261459 scopus 로고    scopus 로고
    • Demographic divergence history of Pied Flycatcher and Collared Flycatcher inferred from whole-genome re-sequencing data
    • Nadachowska-Brzyska, K., Burri, R., Olason, P. I., Kawakami, T., Smeds, L., & Ellegren, H. (2013). Demographic divergence history of Pied Flycatcher and Collared Flycatcher inferred from whole-genome re-sequencing data. PLOS Genetics, 9, e1003942.
    • (2013) PLOS Genetics , vol.9
    • Nadachowska-Brzyska, K.1    Burri, R.2    Olason, P.I.3    Kawakami, T.4    Smeds, L.5    Ellegren, H.6
  • 55
    • 84883552308 scopus 로고    scopus 로고
    • Genome evolution and speciation: Toward quantitative descriptions of pattern and process
    • Nosil, P., & Feder, J. L. (2013). Genome evolution and speciation: Toward quantitative descriptions of pattern and process. Evolution, 67, 2461–2467.
    • (2013) Evolution , vol.67 , pp. 2461-2467
    • Nosil, P.1    Feder, J.L.2
  • 56
    • 84902665599 scopus 로고    scopus 로고
    • The genomic landscape underlying phenotypic integrity in the face of gene flow in Crows
    • Poelstra, J. W., Vijay, N., Bossu, C. M., Lantz, H., Ryll, B., Müller, I., … Wolf, J. B. W. (2014). The genomic landscape underlying phenotypic integrity in the face of gene flow in Crows. Science, 344, 1410–1414.
    • (2014) Science , vol.344 , pp. 1410-1414
    • Poelstra, J.W.1    Vijay, N.2    Bossu, C.M.3    Lantz, H.4    Ryll, B.5    Müller, I.6    Wolf, J.B.W.7
  • 57
    • 84941807208 scopus 로고    scopus 로고
    • Transcriptomics of colour patterning and coloration shifts in crows
    • Poelstra, J. W., Vijay, N., Hoeppner, M. P., & Wolf, J. B. (2015). Transcriptomics of colour patterning and coloration shifts in crows. Molecular Ecology, 24, 4617–4628.
    • (2015) Molecular Ecology , vol.24 , pp. 4617-4628
    • Poelstra, J.W.1    Vijay, N.2    Hoeppner, M.P.3    Wolf, J.B.4
  • 58
    • 84883556376 scopus 로고    scopus 로고
    • Genetic divergence along the speciation continuum: The transition from host race to species in Rhagoletis (Diptera: Tephritidae)
    • Powell, T. H. Q., Hood, G. R., Murphy, M. O., Heilveil, J. S., Berlocher, S. H., Nosil, P., & Feder, J. L. (2013). Genetic divergence along the speciation continuum: The transition from host race to species in Rhagoletis (Diptera: Tephritidae). Evolution, 67, 2561–2576.
    • (2013) Evolution , vol.67 , pp. 2561-2576
    • Powell, T.H.Q.1    Hood, G.R.2    Murphy, M.O.3    Heilveil, J.S.4    Berlocher, S.H.5    Nosil, P.6    Feder, J.L.7
  • 59
    • 84944911288 scopus 로고    scopus 로고
    • A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing
    • Prum, R. O., Berv, J. S., Dornburg, A., Field, D. J., Townsend, J. P., Lemmon, E. M., & Lemmon, A. R. (2015). A comprehensive phylogeny of birds (Aves) using targeted next-generation DNA sequencing. Nature, 526, 569–573.
    • (2015) Nature , vol.526 , pp. 569-573
    • Prum, R.O.1    Berv, J.S.2    Dornburg, A.3    Field, D.J.4    Townsend, J.P.5    Lemmon, E.M.6    Lemmon, A.R.7
  • 60
    • 85007170287 scopus 로고    scopus 로고
    • Population structure and local selection yield high genomic variation in Mimulus guttatus
    • Puzey, J. R., Willis, J. H., & Kelly, J. K. (2017). Population structure and local selection yield high genomic variation in Mimulus guttatus. Molecular Ecology, 26, 519–535.
    • (2017) Molecular Ecology , vol.26 , pp. 519-535
    • Puzey, J.R.1    Willis, J.H.2    Kelly, J.K.3
  • 61
    • 77951770756 scopus 로고    scopus 로고
    • BEDTools: A flexible suite of utilities for comparing genomic features
    • Quinlan, A. R., & Hall, I. M. (2010). BEDTools: A flexible suite of utilities for comparing genomic features. Bioinformatics, 26, 841–842.
    • (2010) Bioinformatics , vol.26 , pp. 841-842
    • Quinlan, A.R.1    Hall, I.M.2
  • 62
    • 84873700991 scopus 로고    scopus 로고
    • Insights into the evolution of Darwin's Finches from comparative analysis of the Geospiza Magnirostris genome sequence
    • Rands, C. M., Darling, A., Fujita, M., Kong, L., Webster, M. T., Clabaut, C., … Ponting, C. P. (2013). Insights into the evolution of Darwin's Finches from comparative analysis of the Geospiza Magnirostris genome sequence. BMC Genomics, 14, 95.
    • (2013) BMC Genomics , vol.14 , pp. 95
    • Rands, C.M.1    Darling, A.2    Fujita, M.3    Kong, L.4    Webster, M.T.5    Clabaut, C.6    Ponting, C.P.7
  • 64
    • 84862025426 scopus 로고    scopus 로고
    • Genome divergence during evolutionary diversification as revealed in replicate Lake–stream Stickleback population pairs
    • Roesti, M., Hendry, A. P., Salzburger, W., & Berner, D. (2012). Genome divergence during evolutionary diversification as revealed in replicate Lake–stream Stickleback population pairs. Molecular Ecology, 21, 2852–2862.
    • (2012) Molecular Ecology , vol.21 , pp. 2852-2862
    • Roesti, M.1    Hendry, A.P.2    Salzburger, W.3    Berner, D.4
  • 65
    • 84946782276 scopus 로고    scopus 로고
    • The genomics of ecological vicariance in Threespine Stickleback Fish
    • Roesti, M., Kueng, B., Moser, D., & Berner, D. (2015). The genomics of ecological vicariance in Threespine Stickleback Fish. Nature Communications, 6, 8767.
    • (2015) Nature Communications , vol.6 , pp. 8767
    • Roesti, M.1    Kueng, B.2    Moser, D.3    Berner, D.4
  • 66
    • 84878444624 scopus 로고    scopus 로고
    • Recombination in the threespine stickleback genome-patterns and consequences
    • Roesti, M., Moser, S., & Berner, D. (2013). Recombination in the threespine stickleback genome-patterns and consequences. Molecular Ecology, 22, 3014–3027.
    • (2013) Molecular Ecology , vol.22 , pp. 3014-3027
    • Roesti, M.1    Moser, S.2    Berner, D.3
  • 67
    • 84979856712 scopus 로고    scopus 로고
    • Reconstruction of gross Avian genome structure, organization and evolution suggests that the Chicken lineage most closely resembles the Dinosaur Avian ancestor
    • Romanov, M. N., Farré, M., Lithgow, P. E., Fowler, K. E., Skinner, B. M., O'Connor, R., … Griffin, D. K. (2014). Reconstruction of gross Avian genome structure, organization and evolution suggests that the Chicken lineage most closely resembles the Dinosaur Avian ancestor. BMC Genomics, 15, 1060.
    • (2014) BMC Genomics , vol.15 , pp. 1060
    • Romanov, M.N.1    Farré, M.2    Lithgow, P.E.3    Fowler, K.E.4    Skinner, B.M.5    O'Connor, R.6    Griffin, D.K.7
  • 68
    • 33644974019 scopus 로고    scopus 로고
    • A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase
    • Scheet, P., & Stephens, M. (2006). A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase. American Journal of Human Genetics, 78, 629–644.
    • (2006) American Journal of Human Genetics , vol.78 , pp. 629-644
    • Scheet, P.1    Stephens, M.2
  • 72
    • 84905126894 scopus 로고    scopus 로고
    • The impact of linked selection on plant genomic variation
    • Slotte, T. (2014). The impact of linked selection on plant genomic variation. Briefings in Functional Genomics, 13, 268–275.
    • (2014) Briefings in Functional Genomics , vol.13 , pp. 268-275
    • Slotte, T.1
  • 73
    • 85027060293 scopus 로고    scopus 로고
    • Large scale variation in the rate of de novo mutation in humans and its relationship to divergence and diversity
    • 110452
    • Smith, T., & Eyre-Walker, A. (2017). Large scale variation in the rate of de novo mutation in humans and its relationship to divergence and diversity. bioRxiv, 110452. https://doi.org/10.1101/110452
    • (2017) bioRxiv
    • Smith, T.1    Eyre-Walker, A.2
  • 74
    • 0016220238 scopus 로고
    • The hitch-hiking effect of a favourable gene
    • Smith, J. M., & Haigh, J. (1974). The hitch-hiking effect of a favourable gene. Genetical Research, 23, 23–35.
    • (1974) Genetical Research , vol.23 , pp. 23-35
    • Smith, J.M.1    Haigh, J.2
  • 82
    • 84872483518 scopus 로고    scopus 로고
    • Challenges and strategies in transcriptome assembly and differential gene expression quantification. a comprehensive in silico assessment of RNA-Seq experiments
    • Vijay, N., Poelstra, J. W., Künstner, A., & Wolf, J. B. (2013). Challenges and strategies in transcriptome assembly and differential gene expression quantification. a comprehensive in silico assessment of RNA-Seq experiments. Molecular Ecology, 22, 620–634.
    • (2013) Molecular Ecology , vol.22 , pp. 620-634
    • Vijay, N.1    Poelstra, J.W.2    Künstner, A.3    Wolf, J.B.4
  • 83
    • 84996563564 scopus 로고    scopus 로고
    • Evidence for GC-Biased gene conversion as a driver of between-lineage differences in Avian base composition
    • Weber, C. C., Boussau, B., Romiguier, J., Jarvis, E. D., & Ellegren, H. (2014). Evidence for GC-Biased gene conversion as a driver of between-lineage differences in Avian base composition. Genome Biology, 15, 549.
    • (2014) Genome Biology , vol.15 , pp. 549
    • Weber, C.C.1    Boussau, B.2    Romiguier, J.3    Jarvis, E.D.4    Ellegren, H.5
  • 84
    • 85019142404 scopus 로고    scopus 로고
    • Combination of short-read, long-read and optical mapping assemblies reveals presumably heterochromatic tandem repeat arrays with population genetic implications
    • Weissensteiner, M. H., Pang, A. W. C., Bunikis, I., Höijer, I., Vinnere-Petterson, O., Suh, A., & Wolf, J. B. W. (2017). Combination of short-read, long-read and optical mapping assemblies reveals presumably heterochromatic tandem repeat arrays with population genetic implications. Genome Research, 27, 697–708.
    • (2017) Genome Research , vol.27 , pp. 697-708
    • Weissensteiner, M.H.1    Pang, A.W.C.2    Bunikis, I.3    Höijer, I.4    Vinnere-Petterson, O.5    Suh, A.6    Wolf, J.B.W.7
  • 85
    • 77951917823 scopus 로고    scopus 로고
    • Nucleotide divergence vs. gene expression differentiation: Comparative transcriptome sequencing in natural isolates from the carrion crow and its hybrid zone with the hooded crow
    • Wolf, J. B. W., Bayer, T., Haubold, B., Schilhabel, M., Rosenstiel, P., & Tautz, D. (2010). Nucleotide divergence vs. gene expression differentiation: Comparative transcriptome sequencing in natural isolates from the carrion crow and its hybrid zone with the hooded crow. Molecular Ecology, 19, 162–175.
    • (2010) Molecular Ecology , vol.19 , pp. 162-175
    • Wolf, J.B.W.1    Bayer, T.2    Haubold, B.3    Schilhabel, M.4    Rosenstiel, P.5    Tautz, D.6
  • 86
    • 84994691945 scopus 로고    scopus 로고
    • Making sense of genomic islands of differentiation in light of speciation
    • Wolf, J. B. W., & Ellegren, H. (2017). Making sense of genomic islands of differentiation in light of speciation. Nature Reviews Genetics, 18, 87–100.
    • (2017) Nature Reviews Genetics , vol.18 , pp. 87-100
    • Wolf, J.B.W.1    Ellegren, H.2
  • 88
    • 0035677674 scopus 로고    scopus 로고
    • The genic view of the process of speciation
    • Wu, C. I. (2001). The genic view of the process of speciation. Journal of Evolutionary Biology, 14, 851–865.
    • (2001) Journal of Evolutionary Biology , vol.14 , pp. 851-865
    • Wu, C.I.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.