메뉴 건너뛰기




Volumn 134, Issue 3, 2017, Pages 507-516

H3-/IDH-wild type pediatric glioblastoma is comprised of molecularly and prognostically distinct subtypes with associated oncogenic drivers

Author keywords

Brain tumor; EGFR; Glioblastoma; Methylation; MYCN; PDGFRA; Pediatric; Prognostic; RTK; Subgroup; Survival

Indexed keywords

CYCLIN DEPENDENT KINASE 4; CYCLIN DEPENDENT KINASE 6; CYCLIN DEPENDENT KINASE INHIBITOR 2A; CYCLIN DEPENDENT KINASE INHIBITOR 2B; EPIDERMAL GROWTH FACTOR RECEPTOR; H3F3A PROTEIN; HIST1H3A PROTEIN; HIST1H3B PROTEIN; HIST1H3C PROTEIN; HIST2H3C PROTEIN; HISTONE H3; ISOCITRATE DEHYDROGENASE 1; ISOCITRATE DEHYDROGENASE 2; MYCN PROTEIN; PLATELET DERIVED GROWTH FACTOR ALPHA RECEPTOR; PROTEIN; UNCLASSIFIED DRUG; HISTONE; IDH1 PROTEIN, HUMAN; ISOCITRATE DEHYDROGENASE;

EID: 85017450635     PISSN: 00016322     EISSN: 14320533     Source Type: Journal    
DOI: 10.1007/s00401-017-1710-1     Document Type: Article
Times cited : (152)

References (34)
  • 2
    • 84866542816 scopus 로고    scopus 로고
    • MGMT methylation analysis of glioblastoma on the Infinium methylation BeadChip identifies two distinct CpG regions associated with gene silencing and outcome, yielding a prediction model for comparisons across datasets, tumor grades, and CIMP-status
    • COI: 1:CAS:528:DC%2BC38Xhtlygtb%2FK, PID: 22810491
    • Bady P, Sciuscio D, Diserens AC, Bloch J, van den Bent MJ, Marosi C, Dietrich PY, Weller M, Mariani L, Heppner FL et al (2012) MGMT methylation analysis of glioblastoma on the Infinium methylation BeadChip identifies two distinct CpG regions associated with gene silencing and outcome, yielding a prediction model for comparisons across datasets, tumor grades, and CIMP-status. Acta Neuropathol 124:547–560. doi:10.1007/s00401-012-1016-2
    • (2012) Acta Neuropathol , vol.124 , pp. 547-560
    • Bady, P.1    Sciuscio, D.2    Diserens, A.C.3    Bloch, J.4    van den Bent, M.J.5    Marosi, C.6    Dietrich, P.Y.7    Weller, M.8    Mariani, L.9    Heppner, F.L.10
  • 4
    • 84899570180 scopus 로고    scopus 로고
    • Genomic analysis of diffuse intrinsic pontine gliomas identifies three molecular subgroups and recurrent activating ACVR1 mutations
    • COI: 1:CAS:528:DC%2BC2cXls1Khtbs%3D, PID: 24705254
    • Buczkowicz P, Hoeman C, Rakopoulos P, Pajovic S, Letourneau L, Dzamba M, Morrison A, Lewis P, Bouffet E, Bartels U et al (2014) Genomic analysis of diffuse intrinsic pontine gliomas identifies three molecular subgroups and recurrent activating ACVR1 mutations. Nat Genet 46:451–456. doi:10.1038/ng.2936
    • (2014) Nat Genet , vol.46 , pp. 451-456
    • Buczkowicz, P.1    Hoeman, C.2    Rakopoulos, P.3    Pajovic, S.4    Letourneau, L.5    Dzamba, M.6    Morrison, A.7    Lewis, P.8    Bouffet, E.9    Bartels, U.10
  • 5
    • 84947617209 scopus 로고    scopus 로고
    • Histone H3F3A and HIST1H3B K27 M mutations define two subgroups of diffuse intrinsic pontine gliomas with different prognosis and phenotypes
    • COI: 1:CAS:528:DC%2BC2MXhsF2ru7%2FF, PID: 26399631
    • Castel D, Philippe C, Calmon R, Le Dret L, Truffaux N, Boddaert N, Pages M, Taylor KR, Saulnier P, Lacroix L et al (2015) Histone H3F3A and HIST1H3B K27 M mutations define two subgroups of diffuse intrinsic pontine gliomas with different prognosis and phenotypes. Acta Neuropathol 130:815–827. doi:10.1007/s00401-015-1478-0
    • (2015) Acta Neuropathol , vol.130 , pp. 815-827
    • Castel, D.1    Philippe, C.2    Calmon, R.3    Le Dret, L.4    Truffaux, N.5    Boddaert, N.6    Pages, M.7    Taylor, K.R.8    Saulnier, P.9    Lacroix, L.10
  • 7
    • 0033108117 scopus 로고    scopus 로고
    • The treatment of malignant brain tumors in infants and very young children: an update of the Pediatric Oncology Group experience
    • COI: 1:STN:280:DC%2BD3MrgsFyjsw%3D%3D, PID: 11554387
    • Duffner PK, Horowitz ME, Krischer JP, Burger PC, Cohen ME, Sanford RA, Friedman HS, Kun LE (1999) The treatment of malignant brain tumors in infants and very young children: an update of the Pediatric Oncology Group experience. Neuro Oncol 1:152–161
    • (1999) Neuro Oncol , vol.1 , pp. 152-161
    • Duffner, P.K.1    Horowitz, M.E.2    Krischer, J.P.3    Burger, P.C.4    Cohen, M.E.5    Sanford, R.A.6    Friedman, H.S.7    Kun, L.E.8
  • 9
    • 84878588603 scopus 로고    scopus 로고
    • Robust molecular subgrouping and copy-number profiling of medulloblastoma from small amounts of archival tumour material using high-density DNA methylation arrays
    • PID: 23670100
    • Hovestadt V, Remke M, Kool M, Pietsch T, Northcott PA, Fischer R, Cavalli FM, Ramaswamy V, Zapatka M, Reifenberger G et al (2013) Robust molecular subgrouping and copy-number profiling of medulloblastoma from small amounts of archival tumour material using high-density DNA methylation arrays. Acta Neuropathol 125:913–916. doi:10.1007/s00401-013-1126-5
    • (2013) Acta Neuropathol , vol.125 , pp. 913-916
    • Hovestadt, V.1    Remke, M.2    Kool, M.3    Pietsch, T.4    Northcott, P.A.5    Fischer, R.6    Cavalli, F.M.7    Ramaswamy, V.8    Zapatka, M.9    Reifenberger, G.10
  • 10
    • 84930188532 scopus 로고    scopus 로고
    • Unique genetic and epigenetic mechanisms driving paediatric diffuse high-grade glioma
    • Jones C, Baker SJ (2014) Unique genetic and epigenetic mechanisms driving paediatric diffuse high-grade glioma. Nat Rev Cancer. doi:10.1038/nrc3811
    • (2014) Nat Rev Cancer
    • Jones, C.1    Baker, S.J.2
  • 11
    • 84863434843 scopus 로고    scopus 로고
    • Paediatric and adult malignant glioma: close relatives or distant cousins?
    • COI: 1:CAS:528:DC%2BC38XpsVSgtro%3D, PID: 22641364
    • Jones C, Perryman L, Hargrave D (2012) Paediatric and adult malignant glioma: close relatives or distant cousins? Nat Rev Clin Oncol 9:400–413. doi:10.1038/nrclinonc.2012.87
    • (2012) Nat Rev Clin Oncol , vol.9 , pp. 400-413
    • Jones, C.1    Perryman, L.2    Hargrave, D.3
  • 15
    • 84952981858 scopus 로고    scopus 로고
    • Histologically distinct neuroepithelial tumors with histone 3 G34 mutation are molecularly similar and comprise a single nosologic entity
    • COI: 1:CAS:528:DC%2BC2MXhs12jtLjI, PID: 26482474
    • Korshunov A, Capper D, Reuss D, Schrimpf D, Ryzhova M, Hovestadt V, Sturm D, Meyer J, Jones C, Zheludkova O et al (2016) Histologically distinct neuroepithelial tumors with histone 3 G34 mutation are molecularly similar and comprise a single nosologic entity. Acta Neuropathol 131:137–146. doi:10.1007/s00401-015-1493-1
    • (2016) Acta Neuropathol , vol.131 , pp. 137-146
    • Korshunov, A.1    Capper, D.2    Reuss, D.3    Schrimpf, D.4    Ryzhova, M.5    Hovestadt, V.6    Sturm, D.7    Meyer, J.8    Jones, C.9    Zheludkova, O.10
  • 16
    • 84939973619 scopus 로고    scopus 로고
    • Integrated analysis of pediatric glioblastoma reveals a subset of biologically favorable tumors with associated molecular prognostic markers
    • COI: 1:CAS:528:DC%2BC2MXksVyhs7Y%3D, PID: 25752754
    • Korshunov A, Ryzhova M, Hovestadt V, Bender S, Sturm D, Capper D, Meyer J, Schrimpf D, Kool M, Northcott PA et al (2015) Integrated analysis of pediatric glioblastoma reveals a subset of biologically favorable tumors with associated molecular prognostic markers. Acta Neuropathol 129:669–678. doi:10.1007/s00401-015-1405-4
    • (2015) Acta Neuropathol , vol.129 , pp. 669-678
    • Korshunov, A.1    Ryzhova, M.2    Hovestadt, V.3    Bender, S.4    Sturm, D.5    Capper, D.6    Meyer, J.7    Schrimpf, D.8    Kool, M.9    Northcott, P.A.10
  • 18
    • 84930244376 scopus 로고    scopus 로고
    • Next-generation (epi)genetic drivers of childhood brain tumours and the outlook for targeted therapies
    • PID: 26065614
    • Northcott PA, Pfister SM, Jones DT (2015) Next-generation (epi)genetic drivers of childhood brain tumours and the outlook for targeted therapies. Lancet Oncol 16:e293–e302. doi:10.1016/S1470-2045(14)71206-9
    • (2015) Lancet Oncol , vol.16 , pp. e293-e302
    • Northcott, P.A.1    Pfister, S.M.2    Jones, D.T.3
  • 19
    • 84979857888 scopus 로고    scopus 로고
    • Alex’s Lemonade stand foundation infant and childhood primary brain and central nervous system tumors diagnosed in the United States in 2007–2011
    • PID: 25542864
    • Ostrom QT, de Blank PM, Kruchko C, Petersen CM, Liao P, Finlay JL, Stearns DS, Wolff JE, Wolinsky Y, Letterio JJ et al (2015) Alex’s Lemonade stand foundation infant and childhood primary brain and central nervous system tumors diagnosed in the United States in 2007–2011. Neuro Oncol 16(Suppl 10):x1–x36. doi:10.1093/neuonc/nou327
    • (2015) Neuro Oncol , vol.16 , pp. x1-x36
    • Ostrom, Q.T.1    de Blank, P.M.2    Kruchko, C.3    Petersen, C.M.4    Liao, P.5    Finlay, J.L.6    Stearns, D.S.7    Wolff, J.E.8    Wolinsky, Y.9    Letterio, J.J.10
  • 20
    • 84929178049 scopus 로고    scopus 로고
    • Molecular classification of ependymal tumors across all CNS compartments, histopathological grades, and age groups
    • COI: 1:CAS:528:DC%2BC2MXosVamurY%3D, PID: 25965575
    • Pajtler KW, Witt H, Sill M, Jones DT, Hovestadt V, Kratochwil F, Wani K, Tatevossian R, Punchihewa C, Johann P et al (2015) Molecular classification of ependymal tumors across all CNS compartments, histopathological grades, and age groups. Cancer Cell 27:728–743. doi:10.1016/j.ccell.2015.04.002
    • (2015) Cancer Cell , vol.27 , pp. 728-743
    • Pajtler, K.W.1    Witt, H.2    Sill, M.3    Jones, D.T.4    Hovestadt, V.5    Kratochwil, F.6    Wani, K.7    Tatevossian, R.8    Punchihewa, C.9    Johann, P.10
  • 21
    • 77954596239 scopus 로고    scopus 로고
    • Integrated molecular genetic profiling of pediatric high-grade gliomas reveals key differences with the adult disease
    • PID: 20479398
    • Paugh BS, Qu C, Jones C, Liu Z, Adamowicz-Brice M, Zhang J, Bax DA, Coyle B, Barrow J, Hargrave D et al (2010) Integrated molecular genetic profiling of pediatric high-grade gliomas reveals key differences with the adult disease. J Clin Oncol 28:3061–3068. doi:10.1200/JCO.2009.26.7252
    • (2010) J Clin Oncol , vol.28 , pp. 3061-3068
    • Paugh, B.S.1    Qu, C.2    Jones, C.3    Liu, Z.4    Adamowicz-Brice, M.5    Zhang, J.6    Bax, D.A.7    Coyle, B.8    Barrow, J.9    Hargrave, D.10
  • 22
    • 84882247189 scopus 로고    scopus 로고
    • PDGFRA amplification is common in pediatric and adult high-grade astrocytomas and identifies a poor prognostic group in IDH1 mutant glioblastoma
    • COI: 1:CAS:528:DC%2BC3sXhs12mt7rI, PID: 23438035
    • Phillips JJ, Aranda D, Ellison DW, Judkins AR, Croul SE, Brat DJ, Ligon KL, Horbinski C, Venneti S, Zadeh G et al (2013) PDGFRA amplification is common in pediatric and adult high-grade astrocytomas and identifies a poor prognostic group in IDH1 mutant glioblastoma. Brain Pathol 23:565–573. doi:10.1111/bpa.12043
    • (2013) Brain Pathol , vol.23 , pp. 565-573
    • Phillips, J.J.1    Aranda, D.2    Ellison, D.W.3    Judkins, A.R.4    Croul, S.E.5    Brat, D.J.6    Ligon, K.L.7    Horbinski, C.8    Venneti, S.9    Zadeh, G.10
  • 23
    • 84857527038 scopus 로고    scopus 로고
    • Mesenchymal transition and PDGFRA amplification/mutation are key distinct oncogenic events in pediatric diffuse intrinsic pontine gliomas
    • COI: 1:CAS:528:DC%2BC38Xjs1ejt7k%3D, PID: 22389665
    • Puget S, Philippe C, Bax DA, Job B, Varlet P, Junier MP, Andreiuolo F, Carvalho D, Reis R, Guerrini-Rousseau L et al (2012) Mesenchymal transition and PDGFRA amplification/mutation are key distinct oncogenic events in pediatric diffuse intrinsic pontine gliomas. PLoS One 7:e30313. doi:10.1371/journal.pone.0030313
    • (2012) PLoS One , vol.7
    • Puget, S.1    Philippe, C.2    Bax, D.A.3    Job, B.4    Varlet, P.5    Junier, M.P.6    Andreiuolo, F.7    Carvalho, D.8    Reis, R.9    Guerrini-Rousseau, L.10
  • 25
    • 84929712325 scopus 로고    scopus 로고
    • ATRX and IDH1-R132H immunohistochemistry with subsequent copy number analysis and IDH sequencing as a basis for an “integrated” diagnostic approach for adult astrocytoma, oligodendroglioma and glioblastoma
    • COI: 1:CAS:528:DC%2BC2cXitVert7rE, PID: 25427834
    • Reuss DE, Sahm F, Schrimpf D, Wiestler B, Capper D, Koelsche C, Schweizer L, Korshunov A, Jones DT, Hovestadt V et al (2015) ATRX and IDH1-R132H immunohistochemistry with subsequent copy number analysis and IDH sequencing as a basis for an “integrated” diagnostic approach for adult astrocytoma, oligodendroglioma and glioblastoma. Acta Neuropathol 129:133–146. doi:10.1007/s00401-014-1370-3
    • (2015) Acta Neuropathol , vol.129 , pp. 133-146
    • Reuss, D.E.1    Sahm, F.2    Schrimpf, D.3    Wiestler, B.4    Capper, D.5    Koelsche, C.6    Schweizer, L.7    Korshunov, A.8    Jones, D.T.9    Hovestadt, V.10
  • 29
    • 84867606428 scopus 로고    scopus 로고
    • Hotspot mutations in H3F3A and IDH1 define distinct epigenetic and biological subgroups of glioblastoma
    • COI: 1:CAS:528:DC%2BC38XhsFWhsr%2FF, PID: 23079654
    • Sturm D, Witt H, Hovestadt V, Khuong-Quang DA, Jones DT, Konermann C, Pfaff E, Tonjes M, Sill M, Bender S et al (2012) Hotspot mutations in H3F3A and IDH1 define distinct epigenetic and biological subgroups of glioblastoma. Cancer Cell 22:425–437. doi:10.1016/j.ccr.2012.08.024
    • (2012) Cancer Cell , vol.22 , pp. 425-437
    • Sturm, D.1    Witt, H.2    Hovestadt, V.3    Khuong-Quang, D.A.4    Jones, D.T.5    Konermann, C.6    Pfaff, E.7    Tonjes, M.8    Sill, M.9    Bender, S.10
  • 31
    • 57249084011 scopus 로고    scopus 로고
    • Visualizing high-dimensional data using t-SNE
    • van der Maarten L, Hinton G (2008) Visualizing high-dimensional data using t-SNE. J Mach Learn Res 9:2579–2605
    • (2008) J Mach Learn Res , vol.9 , pp. 2579-2605
    • van der Maarten, L.1    Hinton, G.2
  • 33
    • 84862777410 scopus 로고    scopus 로고
    • Somatic histone H3 alterations in pediatric diffuse intrinsic pontine gliomas and non-brainstem glioblastomas
    • COI: 1:CAS:528:DC%2BC38XhtlOlsb4%3D, PID: 22286216
    • Wu G, Broniscer A, McEachron TA, Lu C, Paugh BS, Becksfort J, Qu C, Ding L, Huether R, Parker M et al (2012) Somatic histone H3 alterations in pediatric diffuse intrinsic pontine gliomas and non-brainstem glioblastomas. Nat Genet 44:251–253. doi:10.1038/ng.1102
    • (2012) Nat Genet , vol.44 , pp. 251-253
    • Wu, G.1    Broniscer, A.2    McEachron, T.A.3    Lu, C.4    Paugh, B.S.5    Becksfort, J.6    Qu, C.7    Ding, L.8    Huether, R.9    Parker, M.10
  • 34
    • 84899526966 scopus 로고    scopus 로고
    • The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma
    • COI: 1:CAS:528:DC%2BC2cXls1Gkurg%3D, PID: 24705251
    • Wu G, Diaz AK, Paugh BS, Rankin SL, Ju B, Li Y, Zhu X, Qu C, Chen X, Zhang J et al (2014) The genomic landscape of diffuse intrinsic pontine glioma and pediatric non-brainstem high-grade glioma. Nat Genet 46:444–450. doi:10.1038/ng.2938
    • (2014) Nat Genet , vol.46 , pp. 444-450
    • Wu, G.1    Diaz, A.K.2    Paugh, B.S.3    Rankin, S.L.4    Ju, B.5    Li, Y.6    Zhu, X.7    Qu, C.8    Chen, X.9    Zhang, J.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.