-
1
-
-
84878137599
-
Allosteric integrase inhibitor potency is determined through the inhibition of HIV-1 particle maturation
-
Jurado KA, Wang H, Slaughter A, Feng L, Kessl JJ, Koh Y, Wang W, Ballandras-Colas A, Patel PA, Fuchs JR, Kvaratskhelia M, Engelman A (2013) Allosteric integrase inhibitor potency is determined through the inhibition of HIV-1 particle maturation. Proc Natl Acad Sci USA 110:8690–8695.
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 8690-8695
-
-
Jurado, K.A.1
Wang, H.2
Slaughter, A.3
Feng, L.4
Kessl, J.J.5
Koh, Y.6
Wang, W.7
Ballandras-Colas, A.8
Patel, P.A.9
Fuchs, J.R.10
Kvaratskhelia, M.11
Engelman, A.12
-
2
-
-
84959143918
-
Retroviral integrase structure and DNA recombination mechanism
-
Engelman A, Cherepanov P (2014) Retroviral integrase structure and DNA recombination mechanism. Microbiol Spect 2:1–22.
-
(2014)
Microbiol Spect
, vol.2
, pp. 1-22
-
-
Engelman, A.1
Cherepanov, P.2
-
3
-
-
84875545671
-
Non-enzymatic functions of retroviral integrase: the next target for novel anti-HIV drug development
-
Masuda T (2011) Non-enzymatic functions of retroviral integrase: the next target for novel anti-HIV drug development. Front Microbiol 2:210.
-
(2011)
Front Microbiol
, vol.2
, pp. 210
-
-
Masuda, T.1
-
4
-
-
77952553431
-
Rational design of small-molecule inhibitors of the LEDGF/p75-integrase interaction and HIV replication
-
Christ F, Voet A, Marchand A, Nicolet S, Desimmie BA, Marchand D, Bardiot D, Van der Veken NJ, Van Remoortel B, Strelkov SV, De Maeyer M, Chaltin P, Debyser Z (2010) Rational design of small-molecule inhibitors of the LEDGF/p75-integrase interaction and HIV replication. Nat Chem Biol 6:442–448.
-
(2010)
Nat Chem Biol
, vol.6
, pp. 442-448
-
-
Christ, F.1
Voet, A.2
Marchand, A.3
Nicolet, S.4
Desimmie, B.A.5
Marchand, D.6
Bardiot, D.7
Van der Veken, N.J.8
Van Remoortel, B.9
Strelkov, S.V.10
De Maeyer, M.11
Chaltin, P.12
Debyser, Z.13
-
6
-
-
84901287873
-
LEDGINs, non-catalytic site inhibitors of HIV-1 integrase: a patent review (2006 – 2014)
-
Demeulemeester J, Chaltin P, Marchand A, De Maeyer M, Debyser Z, Christ F (2014) LEDGINs, non-catalytic site inhibitors of HIV-1 integrase: a patent review (2006 – 2014). Expert Opin Ther Pat 24:609–632.
-
(2014)
Expert Opin Ther Pat
, vol.24
, pp. 609-632
-
-
Demeulemeester, J.1
Chaltin, P.2
Marchand, A.3
De Maeyer, M.4
Debyser, Z.5
Christ, F.6
-
7
-
-
84928717255
-
HIV-1 integrase multimerization as a therapeutic target
-
In, Torbett BE, Goodsell DS, Richman DD, Eds. (, Switzerland, Springer International Publishing, pp, Available from
-
Feng L, Larue RC, Slaughter A, Kessl JJ, Kvaratskhelia M, HIV-1 integrase multimerization as a therapeutic target. In: Torbett BE, Goodsell DS, Richman DD, Eds. (2015) The future of HIV-1 therapeutics. Vol. 389. Switzerland: Springer International Publishing. pp 93–119. Available from http://link.springer.com/10.1007/82_2015_439.
-
(2015)
The future of HIV-1 therapeutics
, vol.389
, pp. 93-119
-
-
Feng, L.1
Larue, R.C.2
Slaughter, A.3
Kessl, J.J.4
Kvaratskhelia, M.5
-
9
-
-
84860871902
-
Multimode, cooperative mechanism of action of allosteric HIV-1 integrase inhibitors
-
Kessl JJ, Jena N, Koh Y, Taskent-Sezgin H, Slaughter A, Feng L, de Silva S, Wu L, Le Grice SFJ, Engelman A, Fuchs JR, Kvaratskhelia M (2012) Multimode, cooperative mechanism of action of allosteric HIV-1 integrase inhibitors. J Biol Chem 287:16801–16811.
-
(2012)
J Biol Chem
, vol.287
, pp. 16801-16811
-
-
Kessl, J.J.1
Jena, N.2
Koh, Y.3
Taskent-Sezgin, H.4
Slaughter, A.5
Feng, L.6
de Silva, S.7
Wu, L.8
Le Grice, S.F.J.9
Engelman, A.10
Fuchs, J.R.11
Kvaratskhelia, M.12
-
10
-
-
84878214842
-
LEDGINs inhibit late stage HIV-1 replication by modulating integrase multimerization in the virions
-
Desimmie B, Schrijvers R, Demeulemeester J, Borrenberghs D, Weydert C, Thys W, Vets S, Van Remoortel B, Hofkens J, De Rijck J, Hendrix J, Bannert N, Gijsbers R, Christ F, Debyser Z (2013) LEDGINs inhibit late stage HIV-1 replication by modulating integrase multimerization in the virions. Retrovirology 10:57.
-
(2013)
Retrovirology
, vol.10
, pp. 57
-
-
Desimmie, B.1
Schrijvers, R.2
Demeulemeester, J.3
Borrenberghs, D.4
Weydert, C.5
Thys, W.6
Vets, S.7
Van Remoortel, B.8
Hofkens, J.9
De Rijck, J.10
Hendrix, J.11
Bannert, N.12
Gijsbers, R.13
Christ, F.14
Debyser, Z.15
-
11
-
-
84883649897
-
Non-catalytic site HIV-1 integrase inhibitors disrupt core maturation and induce a reverse transcription block in target cells
-
Balakrishnan M, Yant SR, Tsai L, O'Sullivan C, Bam RA, Tsai A, Niedziela-Majka A, Stray KM, Sakowicz R, Cihlar T (2013) Non-catalytic site HIV-1 integrase inhibitors disrupt core maturation and induce a reverse transcription block in target cells. PLoS One 8:e74163.
-
(2013)
PLoS One
, vol.8
-
-
Balakrishnan, M.1
Yant, S.R.2
Tsai, L.3
O'Sullivan, C.4
Bam, R.A.5
Tsai, A.6
Niedziela-Majka, A.7
Stray, K.M.8
Sakowicz, R.9
Cihlar, T.10
-
12
-
-
84905390193
-
Allosteric inhibition of human immunodeficiency virus integrase: late block during viral replication and abnormal multimerization involving specific protein domains
-
Gupta K, Brady T, Dyer BM, Malani N, Hwang Y, Male F, Nolte RT, Wang L, Velthuisen E, Jeffrey J, Van Duyne GD, Bushman FD (2014) Allosteric inhibition of human immunodeficiency virus integrase: late block during viral replication and abnormal multimerization involving specific protein domains. J Biol Chem 289:20477–20488.
-
(2014)
J Biol Chem
, vol.289
, pp. 20477-20488
-
-
Gupta, K.1
Brady, T.2
Dyer, B.M.3
Malani, N.4
Hwang, Y.5
Male, F.6
Nolte, R.T.7
Wang, L.8
Velthuisen, E.9
Jeffrey, J.10
Van Duyne, G.D.11
Bushman, F.D.12
-
13
-
-
84940994512
-
Distribution and redistribution of HIV-1 nucleocapsid protein in immature, mature, and integrase-inhibited virions: a role for integrase in maturation
-
Fontana J, Jurado KA, Cheng N, Ly NL, Fuchs JR, Gorelick RJ, Engelman AN, Steven AC (2015) Distribution and redistribution of HIV-1 nucleocapsid protein in immature, mature, and integrase-inhibited virions: a role for integrase in maturation. J Virol 89:9765–9780.
-
(2015)
J Virol
, vol.89
, pp. 9765-9780
-
-
Fontana, J.1
Jurado, K.A.2
Cheng, N.3
Ly, N.L.4
Fuchs, J.R.5
Gorelick, R.J.6
Engelman, A.N.7
Steven, A.C.8
-
14
-
-
84934915505
-
The mechanism of H171T resistance reveals the importance of Ndelta-protonated His171 for the binding of allosteric inhibitor BI-D to HIV-1 integrase
-
Slaughter A, Jurado KA, Deng N, Feng L, Kessl JJ, Shkriabai N, Larue RC, Fadel HJ, Patel PA, Jena N, Fuchs JR, Poeschla E, Levy RM, Engelman A, Kvaratskhelia M (2014) The mechanism of H171T resistance reveals the importance of Ndelta-protonated His171 for the binding of allosteric inhibitor BI-D to HIV-1 integrase. Retrovirology 11:100.
-
(2014)
Retrovirology
, vol.11
, pp. 100
-
-
Slaughter, A.1
Jurado, K.A.2
Deng, N.3
Feng, L.4
Kessl, J.J.5
Shkriabai, N.6
Larue, R.C.7
Fadel, H.J.8
Patel, P.A.9
Jena, N.10
Fuchs, J.R.11
Poeschla, E.12
Levy, R.M.13
Engelman, A.14
Kvaratskhelia, M.15
-
15
-
-
84878408619
-
The A128T resistance mutation reveals aberrant protein multimerization as the primary mechanism of action of allosteric HIV-1 integrase inhibitors
-
Feng L, Sharma A, Slaughter A, Jena N, Koh Y, Shkriabai N, Larue RC, Patel PA, Mitsuya H, Kessl JJ, Engelman A, Fuchs JR, Kvaratskhelia M (2013) The A128T resistance mutation reveals aberrant protein multimerization as the primary mechanism of action of allosteric HIV-1 integrase inhibitors. J Biol Chem 288:15813–15820.
-
(2013)
J Biol Chem
, vol.288
, pp. 15813-15820
-
-
Feng, L.1
Sharma, A.2
Slaughter, A.3
Jena, N.4
Koh, Y.5
Shkriabai, N.6
Larue, R.C.7
Patel, P.A.8
Mitsuya, H.9
Kessl, J.J.10
Engelman, A.11
Fuchs, J.R.12
Kvaratskhelia, M.13
-
16
-
-
84901253412
-
Preclinical profile of BI 224436, a novel HIV-1 non-catalytic-site integrase inhibitor
-
Fenwick C, Amad M, Bailey MD, Bethell R, Bos M, Bonneau P, Cordingley M, Coulombe R, Duan J, Edwards P, Fader LD, Faucher A-M, Garneau M, Jakalian A, Kawai S, Lamorte L, LaPlante S, Luo L, Mason S, Poupart M-A, Rioux N, Schroeder P, Simoneau B, Tremblay S, Tsantrizos Y, Witvrouw M, Yoakim C (2014) Preclinical profile of BI 224436, a novel HIV-1 non-catalytic-site integrase inhibitor. Antimicrob Agents Chemother 58:3233–3244.
-
(2014)
Antimicrob Agents Chemother
, vol.58
, pp. 3233-3244
-
-
Fenwick, C.1
Amad, M.2
Bailey, M.D.3
Bethell, R.4
Bos, M.5
Bonneau, P.6
Cordingley, M.7
Coulombe, R.8
Duan, J.9
Edwards, P.10
Fader, L.D.11
Faucher, A.-M.12
Garneau, M.13
Jakalian, A.14
Kawai, S.15
Lamorte, L.16
LaPlante, S.17
Luo, L.18
Mason, S.19
Poupart, M.-A.20
Rioux, N.21
Schroeder, P.22
Simoneau, B.23
Tremblay, S.24
Tsantrizos, Y.25
Witvrouw, M.26
Yoakim, C.27
more..
-
17
-
-
84907222847
-
A critical role of the C-terminal segment for allosteric inhibitor-induced aberrant multimerization of HIV-1 integrase
-
Shkriabai N, Dharmarajan V, Slaughter A, Kessl JJ, Larue RC, Feng L, Fuchs JR, Griffin PR, Kvaratskhelia M (2014) A critical role of the C-terminal segment for allosteric inhibitor-induced aberrant multimerization of HIV-1 integrase. J Biol Chem 289:26430–26440.
-
(2014)
J Biol Chem
, vol.289
, pp. 26430-26440
-
-
Shkriabai, N.1
Dharmarajan, V.2
Slaughter, A.3
Kessl, J.J.4
Larue, R.C.5
Feng, L.6
Fuchs, J.R.7
Griffin, P.R.8
Kvaratskhelia, M.9
-
18
-
-
0037442962
-
HADDOCK: a protein−protein docking approach based on biochemical or biophysical information
-
Dominguez C, Boelens R, Bonvin AMJJ (2003) HADDOCK: a protein−protein docking approach based on biochemical or biophysical information. J Am Chem Soc 125:1731–1737.
-
(2003)
J Am Chem Soc
, vol.125
, pp. 1731-1737
-
-
Dominguez, C.1
Boelens, R.2
Bonvin, A.M.J.J.3
-
19
-
-
84959457637
-
The HADDOCK2.2 web server: user-friendly integrative modeling of biomolecular complexes
-
van Zundert GCP, Rodrigues JPGLM, Trellet M, Schmitz C, Kastritis PL, Karaca E, Melquiond ASJ, van Dijk M, de Vries SJ, Bonvin AMJJ (2016) The HADDOCK2.2 web server: user-friendly integrative modeling of biomolecular complexes. J Mol Biol 428:720–725.
-
(2016)
J Mol Biol
, vol.428
, pp. 720-725
-
-
van Zundert, G.C.P.1
Rodrigues, J.P.G.L.M.2
Trellet, M.3
Schmitz, C.4
Kastritis, P.L.5
Karaca, E.6
Melquiond, A.S.J.7
van Dijk, M.8
de Vries, S.J.9
Bonvin, A.M.J.J.10
-
20
-
-
84901657154
-
A new class of multimerization selective inhibitors of HIV-1 integrase
-
Sharma A, Slaughter A, Jena N, Feng L, Kessl JJ, Fadel HJ, Malani N, Male F, Wu L, Poeschla E, Bushman FD, Fuchs JR, Kvaratskhelia M (2014) A new class of multimerization selective inhibitors of HIV-1 integrase. PLoS Pathog 10:e1004171.
-
(2014)
PLoS Pathog
, vol.10
-
-
Sharma, A.1
Slaughter, A.2
Jena, N.3
Feng, L.4
Kessl, J.J.5
Fadel, H.J.6
Malani, N.7
Male, F.8
Wu, L.9
Poeschla, E.10
Bushman, F.D.11
Fuchs, J.R.12
Kvaratskhelia, M.13
-
21
-
-
33750124980
-
Extra precision glide: docking and scoring incorporating a model of hydrophobic enclosure for protein−ligand complexes
-
Friesner RA, Murphy RB, Repasky MP, Frye LL, Greenwood JR, Halgren TA, Sanschagrin PC, Mainz DT (2006) Extra precision glide: docking and scoring incorporating a model of hydrophobic enclosure for protein−ligand complexes. J Med Chem 49:6177–6196.
-
(2006)
J Med Chem
, vol.49
, pp. 6177-6196
-
-
Friesner, R.A.1
Murphy, R.B.2
Repasky, M.P.3
Frye, L.L.4
Greenwood, J.R.5
Halgren, T.A.6
Sanschagrin, P.C.7
Mainz, D.T.8
-
22
-
-
33846524439
-
Motifs for molecular recognition exploiting hydrophobic enclosure in protein-ligand binding
-
Young T, Abel R, Kim B, Berne BJ, Friesner RA (2007) Motifs for molecular recognition exploiting hydrophobic enclosure in protein-ligand binding. Proc Natl Acad Sci USA 104:808–813.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 808-813
-
-
Young, T.1
Abel, R.2
Kim, B.3
Berne, B.J.4
Friesner, R.A.5
-
23
-
-
70450237007
-
Affinities between the binding partners of the HIV-1 integrase dimer-lens epithelium-derived growth factor (IN Dimer-LEDGF) complex
-
Tsiang M, Jones GS, Hung M, Mukund S, Han B, Liu X, Babaoglu K, Lansdon E, Chen X, Todd J, Cai T, Pagratis N, Sakowicz R, Geleziunas R (2009) Affinities between the binding partners of the HIV-1 integrase dimer-lens epithelium-derived growth factor (IN Dimer-LEDGF) complex. J Biol Chem 284:33580–33599.
-
(2009)
J Biol Chem
, vol.284
, pp. 33580-33599
-
-
Tsiang, M.1
Jones, G.S.2
Hung, M.3
Mukund, S.4
Han, B.5
Liu, X.6
Babaoglu, K.7
Lansdon, E.8
Chen, X.9
Todd, J.10
Cai, T.11
Pagratis, N.12
Sakowicz, R.13
Geleziunas, R.14
-
24
-
-
84971310272
-
The competitive interplay between allosteric HIV-1 integrase inhibitor BI/D and LEDGF/p75 during the early stage of HIV-1 replication adversely affects inhibitor potency
-
Feng L, Dharmarajan V, Serrao E, Hoyte A, Larue RC, Slaughter A, Sharma A, Plumb MR, Kessl JJ, Fuchs JR, Bushman FD, Engelman AN, Griffin PR, Kvaratskhelia M (2016) The competitive interplay between allosteric HIV-1 integrase inhibitor BI/D and LEDGF/p75 during the early stage of HIV-1 replication adversely affects inhibitor potency. ACS Chem Biol 11:1313–1321.
-
(2016)
ACS Chem Biol
, vol.11
, pp. 1313-1321
-
-
Feng, L.1
Dharmarajan, V.2
Serrao, E.3
Hoyte, A.4
Larue, R.C.5
Slaughter, A.6
Sharma, A.7
Plumb, M.R.8
Kessl, J.J.9
Fuchs, J.R.10
Bushman, F.D.11
Engelman, A.N.12
Griffin, P.R.13
Kvaratskhelia, M.14
-
25
-
-
0032479179
-
Anatomy of hot spots in protein interfaces
-
Bogan AA, Thorn KS (1998) Anatomy of hot spots in protein interfaces. J Mol Biol 280:1–9.
-
(1998)
J Mol Biol
, vol.280
, pp. 1-9
-
-
Bogan, A.A.1
Thorn, K.S.2
-
26
-
-
34548779127
-
Hot spots-a review of the protein-protein interface determinant amino-acid residues
-
Moreira IS, Fernandes PA, Ramos MJ (2007) Hot spots-a review of the protein-protein interface determinant amino-acid residues. Proteins 68:803–812.
-
(2007)
Proteins
, vol.68
, pp. 803-812
-
-
Moreira, I.S.1
Fernandes, P.A.2
Ramos, M.J.3
-
27
-
-
67650351897
-
Insights into affinity and specificity in the complexes of α-lytic protease and its inhibitor proteins: binding free energy from molecular dynamics simulation
-
Deng N-J, Cieplak P (2009) Insights into affinity and specificity in the complexes of α-lytic protease and its inhibitor proteins: binding free energy from molecular dynamics simulation. Phys Chem Chem Phys 11:4968.
-
(2009)
Phys Chem Chem Phys
, vol.11
, pp. 4968
-
-
Deng, N.-J.1
Cieplak, P.2
-
28
-
-
84898052087
-
Discovery of BI 224436, a noncatalytic site integrase inhibitor (NCINI) of HIV-1
-
Fader LD, Malenfant E, Parisien M, Carson R, Bilodeau F, Landry S, Pesant M, Brochu C, Morin S, Chabot C, Halmos T, Bousquet Y, Bailey MD, Kawai SH, Coulombe R, LaPlanate S, Jakalian A, Bhardwaj PK, Wernic D, Schroeder P, Amad M, Edwards P, Garneau M, Duan J, Cordingley M, Bethell R, Mason SW, Bos M, Bonneau P, Poupart M-A, Faucher A-M, Simoneau B, Fenwick C, Yoakim C, Tsantrizos Y (2014) Discovery of BI 224436, a noncatalytic site integrase inhibitor (NCINI) of HIV-1. ACS Med Chem Lett 5:422–427.
-
(2014)
ACS Med Chem Lett
, vol.5
, pp. 422-427
-
-
Fader, L.D.1
Malenfant, E.2
Parisien, M.3
Carson, R.4
Bilodeau, F.5
Landry, S.6
Pesant, M.7
Brochu, C.8
Morin, S.9
Chabot, C.10
Halmos, T.11
Bousquet, Y.12
Bailey, M.D.13
Kawai, S.H.14
Coulombe, R.15
LaPlanate, S.16
Jakalian, A.17
Bhardwaj, P.K.18
Wernic, D.19
Schroeder, P.20
Amad, M.21
Edwards, P.22
Garneau, M.23
Duan, J.24
Cordingley, M.25
Bethell, R.26
Mason, S.W.27
Bos, M.28
Bonneau, P.29
Poupart, M.-A.30
Faucher, A.-M.31
Simoneau, B.32
Fenwick, C.33
Yoakim, C.34
Tsantrizos, Y.35
more..
-
29
-
-
0034682511
-
Crystal structure of the HIV-1 integrase catalytic core and C-terminal domains: a model for viral DNA binding
-
Chen JC-H, Krucinski J, Miercke LJW, Finer-Moore JS, Tang AH, Leavitt AD, Stroud RM (2000) Crystal structure of the HIV-1 integrase catalytic core and C-terminal domains: a model for viral DNA binding. Proc Natl Acad Sci USA 97:8233–8238.
-
(2000)
Proc Natl Acad Sci USA
, vol.97
, pp. 8233-8238
-
-
Chen, J.C.-H.1
Krucinski, J.2
Miercke, L.J.W.3
Finer-Moore, J.S.4
Tang, A.H.5
Leavitt, A.D.6
Stroud, R.M.7
|