메뉴 건너뛰기




Volumn 113, Issue 42, 2016, Pages E6409-E6417

Mutational landscape of EGFR-, MYC-, and Kras-driven genetically engineered mouse models of lung adenocarcinoma

(17)  McFadden, David G a,h   Politi, Katerina b,c   Bhutkar, Arjun a   Chen, Frances K a   Song, Xiaoling c,i   Pirun, Mono d   Santiago, Philip M a   Kim Kiselak, Caroline a   Platt, James T c   Lee, Emily e   Hodges, Emily e   Rosebrock, Adam P e,j   Bronson, Roderick T f   Socci, Nicholas D d   Hannon, Gregory J e,g,k   Jacks, Tyler a   Varmus, Harold d,l  


Author keywords

EGFR; Exome; GEMM; KRAS; MYC

Indexed keywords

DNA; EPIDERMAL GROWTH FACTOR RECEPTOR; CARCINOGEN;

EID: 84991608512     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.1613601113     Document Type: Article
Times cited : (145)

References (51)
  • 1
    • 84866434919 scopus 로고    scopus 로고
    • Genomic landscape of non-small cell lung cancer in smokers and never-smokers
    • Govindan R, et al. (2012) Genomic landscape of non-small cell lung cancer in smokers and never-smokers. Cell 150(6):1121-1134.
    • (2012) Cell , vol.150 , Issue.6 , pp. 1121-1134
    • Govindan, R.1
  • 2
    • 84866410479 scopus 로고    scopus 로고
    • Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing
    • Imielinski M, et al. (2012) Mapping the hallmarks of lung adenocarcinoma with massively parallel sequencing. Cell 150(6):1107-1120.
    • (2012) Cell , vol.150 , Issue.6 , pp. 1107-1120
    • Imielinski, M.1
  • 3
    • 84942121353 scopus 로고    scopus 로고
    • Lung cancer in the era of precision medicine
    • Politi K, Herbst RS (2015) Lung cancer in the era of precision medicine. Clin Cancer Res 21(10):2213-2220.
    • (2015) Clin Cancer Res , vol.21 , Issue.10 , pp. 2213-2220
    • Politi, K.1    Herbst, R.S.2
  • 4
    • 84905029258 scopus 로고    scopus 로고
    • Comprehensive molecular profiling of lung adenocarcinoma
    • Cancer Genome Atlas Research Network
    • Cancer Genome Atlas Research Network (2014) Comprehensive molecular profiling of lung adenocarcinoma. Nature 511(7511):543-550.
    • (2014) Nature , vol.511 , Issue.7511 , pp. 543-550
  • 5
    • 54549094903 scopus 로고    scopus 로고
    • Somatic mutations affect key pathways in lung adenocarcinoma
    • Ding L, et al. (2008) Somatic mutations affect key pathways in lung adenocarcinoma. Nature 455(7216):1069-1075.
    • (2008) Nature , vol.455 , Issue.7216 , pp. 1069-1075
    • Ding, L.1
  • 6
    • 34648815009 scopus 로고    scopus 로고
    • Lung cancer in never smokers - A different disease
    • Sun S, Schiller JH, Gazdar AF (2007) Lung cancer in never smokers - a different disease. Nat Rev Cancer 7(10):778-790.
    • (2007) Nat Rev Cancer , vol.7 , Issue.10 , pp. 778-790
    • Sun, S.1    Schiller, J.H.2    Gazdar, A.F.3
  • 7
    • 0035893318 scopus 로고    scopus 로고
    • Induction and apoptotic regression of lung adenocarcinomas by regulation of a K-Ras transgene in the presence and absence of tumor suppressor genes
    • Fisher GH, et al. (2001) Induction and apoptotic regression of lung adenocarcinomas by regulation of a K-Ras transgene in the presence and absence of tumor suppressor genes. Genes Dev 15(24):3249-3262.
    • (2001) Genes Dev , vol.15 , Issue.24 , pp. 3249-3262
    • Fisher, G.H.1
  • 8
    • 0035893252 scopus 로고    scopus 로고
    • Analysis of lung tumor initiation and progression using conditional expression of oncogenic K-ras
    • Jackson EL, et al. (2001) Analysis of lung tumor initiation and progression using conditional expression of oncogenic K-ras. Genes Dev 15(24):3243-3248.
    • (2001) Genes Dev , vol.15 , Issue.24 , pp. 3243-3248
    • Jackson, E.L.1
  • 9
    • 33744788136 scopus 로고    scopus 로고
    • The impact of human EGFR kinase domain mutations on lung tumorigenesis and in vivo sensitivity to EGFR-targeted therapies
    • Ji H, et al. (2006) The impact of human EGFR kinase domain mutations on lung tumorigenesis and in vivo sensitivity to EGFR-targeted therapies. Cancer Cell 9(6):485-495.
    • (2006) Cancer Cell , vol.9 , Issue.6 , pp. 485-495
    • Ji, H.1
  • 10
    • 33744814638 scopus 로고    scopus 로고
    • Lung adenocarcinomas induced in mice by mutant EGF receptors found in human lung cancers respond to a tyrosine kinase inhibitor or to downregulation of the receptors
    • Politi K, et al. (2006) Lung adenocarcinomas induced in mice by mutant EGF receptors found in human lung cancers respond to a tyrosine kinase inhibitor or to downregulation of the receptors. Genes Dev 20(11):1496-1510.
    • (2006) Genes Dev , vol.20 , Issue.11 , pp. 1496-1510
    • Politi, K.1
  • 11
    • 77950923924 scopus 로고    scopus 로고
    • Chronic cisplatin treatment promotes enhanced damage repair and tumor progression in a mouse model of lung cancer
    • Oliver TG, et al. (2010) Chronic cisplatin treatment promotes enhanced damage repair and tumor progression in a mouse model of lung cancer. Genes Dev 24(8):837-852.
    • (2010) Genes Dev , vol.24 , Issue.8 , pp. 837-852
    • Oliver, T.G.1
  • 12
    • 77949320964 scopus 로고    scopus 로고
    • Erlotinib resistance in mouse models of epidermal growth factor receptor-induced lung adenocarcinoma
    • Politi K, Fan PD, Shen R, Zakowski M, Varmus H (2010) Erlotinib resistance in mouse models of epidermal growth factor receptor-induced lung adenocarcinoma. Dis Model Mech 3(1-2):111-119.
    • (2010) Dis Model Mech , vol.3 , Issue.1-2 , pp. 111-119
    • Politi, K.1    Fan, P.D.2    Shen, R.3    Zakowski, M.4    Varmus, H.5
  • 13
    • 79955584983 scopus 로고    scopus 로고
    • Suppression of lung adenocarcinoma progression by Nkx2-1
    • Winslow MM, et al. (2011) Suppression of lung adenocarcinoma progression by Nkx2-1. Nature 473(7345):101-104.
    • (2011) Nature , vol.473 , Issue.7345 , pp. 101-104
    • Winslow, M.M.1
  • 14
    • 77955797447 scopus 로고    scopus 로고
    • Cross-species comparison of aCGH data from mouse and human BRCA1- and BRCA2-mutated breast cancers
    • Holstege H, et al. (2010) Cross-species comparison of aCGH data from mouse and human BRCA1- and BRCA2-mutated breast cancers. BMC Cancer 10:455.
    • (2010) BMC Cancer , vol.10 , pp. 455
    • Holstege, H.1
  • 15
    • 34250863886 scopus 로고    scopus 로고
    • Chromosomally unstable mouse tumours have genomic alterations similar to diverse human cancers
    • Maser RS, et al. (2007) Chromosomally unstable mouse tumours have genomic alterations similar to diverse human cancers. Nature 447(7147):966-971.
    • (2007) Nature , vol.447 , Issue.7147 , pp. 966-971
    • Maser, R.S.1
  • 16
    • 33644746131 scopus 로고    scopus 로고
    • Comparison of gene expression and DNA copy number changes in a murine model of lung cancer
    • Sweet-Cordero A, et al. (2006) Comparison of gene expression and DNA copy number changes in a murine model of lung cancer. Genes Chromosomes Cancer 45(4):338-348.
    • (2006) Genes Chromosomes Cancer , vol.45 , Issue.4 , pp. 338-348
    • Sweet-Cordero, A.1
  • 17
    • 80054680116 scopus 로고    scopus 로고
    • Progressive genomic instability in the FVB/Kras(LA2) mouse model of lung cancer
    • To MD, et al. (2011) Progressive genomic instability in the FVB/Kras(LA2) mouse model of lung cancer. Mol Cancer Res 9(10):1339-1345.
    • (2011) Mol Cancer Res , vol.9 , Issue.10 , pp. 1339-1345
    • To, M.D.1
  • 18
    • 77957732035 scopus 로고    scopus 로고
    • Somatic structural rearrangements in genetically engineered mouse mammary tumors
    • Varela I, et al. (2010) Somatic structural rearrangements in genetically engineered mouse mammary tumors. Genome Biol 11(10):R100.
    • (2010) Genome Biol , vol.11 , Issue.10 , pp. R100
    • Varela, I.1
  • 19
    • 84938770070 scopus 로고    scopus 로고
    • Genomic landscape of carcinogen-induced and genetically induced mouse skin squamous cell carcinoma
    • Nassar D, Latil M, Boeckx B, Lambrechts D, Blanpain C (2015) Genomic landscape of carcinogen-induced and genetically induced mouse skin squamous cell carcinoma. Nat Med 21(8):946-954.
    • (2015) Nat Med , vol.21 , Issue.8 , pp. 946-954
    • Nassar, D.1    Latil, M.2    Boeckx, B.3    Lambrechts, D.4    Blanpain, C.5
  • 20
    • 84949623613 scopus 로고    scopus 로고
    • Evolution of metastasis revealed by mutational landscapes of chemically induced skin cancers
    • McCreery MQ, et al. (2015) Evolution of metastasis revealed by mutational landscapes of chemically induced skin cancers. Nat Med 21(12):1514-1520.
    • (2015) Nat Med , vol.21 , Issue.12 , pp. 1514-1520
    • McCreery, M.Q.1
  • 22
    • 79960463418 scopus 로고    scopus 로고
    • Nuclear factor I/B is an oncogene in small cell lung cancer
    • Dooley AL, et al. (2011) Nuclear factor I/B is an oncogene in small cell lung cancer. Genes Dev 25(14):1470-1475.
    • (2011) Genes Dev , vol.25 , Issue.14 , pp. 1470-1475
    • Dooley, A.L.1
  • 23
    • 84896333670 scopus 로고    scopus 로고
    • Genetic and clonal dissection of murine small cell lung carcinoma progression by genome sequencing
    • McFadden DG, et al. (2014) Genetic and clonal dissection of murine small cell lung carcinoma progression by genome sequencing. Cell 156(6):1298-1311.
    • (2014) Cell , vol.156 , Issue.6 , pp. 1298-1311
    • McFadden, D.G.1
  • 24
    • 84925536961 scopus 로고    scopus 로고
    • The mutational landscapes of genetic and chemical models of Kras-driven lung cancer
    • Westcott PM, et al. (2015) The mutational landscapes of genetic and chemical models of Kras-driven lung cancer. Nature 517(7535):489-492.
    • (2015) Nature , vol.517 , Issue.7535 , pp. 489-492
    • Westcott, P.M.1
  • 25
    • 28544432790 scopus 로고    scopus 로고
    • The differential effects of mutant p53 alleles on advanced murine lung cancer
    • Jackson EL, et al. (2005) The differential effects of mutant p53 alleles on advanced murine lung cancer. Cancer Res 65(22):10280-10288.
    • (2005) Cancer Res , vol.65 , Issue.22 , pp. 10280-10288
    • Jackson, E.L.1
  • 26
    • 47749121455 scopus 로고    scopus 로고
    • Combined Inactivation of MYC and K-Ras oncogenes reverses tumorigenesis in lung adenocarcinomas and lymphomas
    • Tran PT, et al. (2008) Combined Inactivation of MYC and K-Ras oncogenes reverses tumorigenesis in lung adenocarcinomas and lymphomas. PLoS One 3(5):e2125.
    • (2008) PLoS One , vol.3 , Issue.5
    • Tran, P.T.1
  • 27
    • 42449105650 scopus 로고    scopus 로고
    • Oncogene cooperation in tumor maintenance and tumor recurrence in mouse mammary tumors induced by Myc and mutant Kras
    • Podsypanina K, Politi K, Beverly LJ, Varmus HE (2008) Oncogene cooperation in tumor maintenance and tumor recurrence in mouse mammary tumors induced by Myc and mutant Kras. Proc Natl Acad Sci USA 105(13):5242-5247.
    • (2008) Proc Natl Acad Sci USA , vol.105 , Issue.13 , pp. 5242-5247
    • Podsypanina, K.1    Politi, K.2    Beverly, L.J.3    Varmus, H.E.4
  • 28
    • 84878722729 scopus 로고    scopus 로고
    • Comparing somatic mutation-callers: Beyond Venn diagrams
    • Kim SY, Speed TP (2013) Comparing somatic mutation-callers: Beyond Venn diagrams. BMC Bioinformatics 14:189.
    • (2013) BMC Bioinformatics , vol.14 , pp. 189
    • Kim, S.Y.1    Speed, T.P.2
  • 29
    • 84874025843 scopus 로고    scopus 로고
    • Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples
    • Cibulskis K, et al. (2013) Sensitive detection of somatic point mutations in impure and heterogeneous cancer samples. Nat Biotechnol 31(3):213-219.
    • (2013) Nat Biotechnol , vol.31 , Issue.3 , pp. 213-219
    • Cibulskis, K.1
  • 30
    • 84937191337 scopus 로고    scopus 로고
    • Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection
    • ICGC-TCGA DREAM Somatic Mutation Calling Challenge participants
    • Ewing AD, et al.; ICGC-TCGA DREAM Somatic Mutation Calling Challenge participants (2015) Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection. Nat Methods 12(7):623-630.
    • (2015) Nat Methods , vol.12 , Issue.7 , pp. 623-630
    • Ewing, A.D.1
  • 31
    • 68149157175 scopus 로고    scopus 로고
    • Conditional mouse lung cancer models using adenoviral or lentiviral delivery of Cre recombinase
    • DuPage M, Dooley AL, Jacks T (2009) Conditional mouse lung cancer models using adenoviral or lentiviral delivery of Cre recombinase. Nat Protoc 4(7):1064-1072.
    • (2009) Nat Protoc , vol.4 , Issue.7 , pp. 1064-1072
    • DuPage, M.1    Dooley, A.L.2    Jacks, T.3
  • 32
    • 0035953550 scopus 로고    scopus 로고
    • Somatic activation of the K-ras oncogene causes early onset lung cancer in mice
    • Johnson L, et al. (2001) Somatic activation of the K-ras oncogene causes early onset lung cancer in mice. Nature 410(6832):1111-1116.
    • (2001) Nature , vol.410 , Issue.6832 , pp. 1111-1116
    • Johnson, L.1
  • 33
    • 84922355311 scopus 로고    scopus 로고
    • A short splice form of Xin-actin binding repeat containing 2 (XIRP2) lacking the Xin repeats is required for maintenance of stereocilia morphology and hearing function
    • Francis SP, et al. (2015) A short splice form of Xin-actin binding repeat containing 2 (XIRP2) lacking the Xin repeats is required for maintenance of stereocilia morphology and hearing function. J Neurosci 35(5):1999-2014.
    • (2015) J Neurosci , vol.35 , Issue.5 , pp. 1999-2014
    • Francis, S.P.1
  • 34
    • 84925674615 scopus 로고    scopus 로고
    • XIRP2, an actin-binding protein essential for inner ear hair-cell stereocilia
    • Scheffer DI, et al. (2015) XIRP2, an actin-binding protein essential for inner ear hair-cell stereocilia. Cell Reports 10(11):1811-1818.
    • (2015) Cell Reports , vol.10 , Issue.11 , pp. 1811-1818
    • Scheffer, D.I.1
  • 35
    • 77952427762 scopus 로고    scopus 로고
    • Essential roles of an intercalated disc protein, mXinbeta, in postnatal heart growth and survival
    • Wang Q, et al. (2010) Essential roles of an intercalated disc protein, mXinbeta, in postnatal heart growth and survival. Circ Res 106(9):1468-1478.
    • (2010) Circ Res , vol.106 , Issue.9 , pp. 1468-1478
    • Wang, Q.1
  • 36
    • 76249090489 scopus 로고    scopus 로고
    • BioGPS: An extensible and customizable portal for querying and organizing gene annotation resources
    • Wu C, et al. (2009) BioGPS: An extensible and customizable portal for querying and organizing gene annotation resources. Genome Biol 10(11):R130.
    • (2009) Genome Biol , vol.10 , Issue.11 , pp. R130
    • Wu, C.1
  • 37
    • 84943272498 scopus 로고    scopus 로고
    • Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity
    • Fujimoto A, et al. (2015) Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity. Nat Commun 6:6120.
    • (2015) Nat Commun , vol.6 , pp. 6120
    • Fujimoto, A.1
  • 38
    • 84933039054 scopus 로고    scopus 로고
    • Evidence that synthetic lethality underlies the mutual exclusivity of oncogenic KRAS and EGFR mutations in lung adenocarcinoma
    • Unni AM, Lockwood WW, Zejnullahu K, Lee-Lin SQ, Varmus H (2015) Evidence that synthetic lethality underlies the mutual exclusivity of oncogenic KRAS and EGFR mutations in lung adenocarcinoma. eLife 4:e06907.
    • (2015) eLife , vol.4
    • Unni, A.M.1    Lockwood, W.W.2    Zejnullahu, K.3    Lee-Lin, S.Q.4    Varmus, H.5
  • 39
    • 67649857200 scopus 로고    scopus 로고
    • The role of senescence and prosurvival signaling in controlling the oncogenic activity of FGFR2 mutants associated with cancer and birth defects
    • Ota S, Zhou ZQ, Link JM, Hurlin PJ (2009) The role of senescence and prosurvival signaling in controlling the oncogenic activity of FGFR2 mutants associated with cancer and birth defects. Hum Mol Genet 18(14):2609-2621.
    • (2009) Hum Mol Genet , vol.18 , Issue.14 , pp. 2609-2621
    • Ota, S.1    Zhou, Z.Q.2    Link, J.M.3    Hurlin, P.J.4
  • 40
    • 84907056979 scopus 로고    scopus 로고
    • Kinase domain activation of FGFR2 yields high-grade lung adenocarcinoma sensitive to a Pan-FGFR inhibitor in a mouse model of NSCLC
    • Tchaicha JH, et al. (2014) Kinase domain activation of FGFR2 yields high-grade lung adenocarcinoma sensitive to a Pan-FGFR inhibitor in a mouse model of NSCLC. Cancer Res 74(17):4676-4684.
    • (2014) Cancer Res , vol.74 , Issue.17 , pp. 4676-4684
    • Tchaicha, J.H.1
  • 41
    • 3543105225 scopus 로고    scopus 로고
    • Circular binary segmentation for the analysis of array-based DNA copy number data
    • Olshen AB, Venkatraman ES, Lucito R, Wigler M (2004) Circular binary segmentation for the analysis of array-based DNA copy number data. Biostatistics 5(4):557-572.
    • (2004) Biostatistics , vol.5 , Issue.4 , pp. 557-572
    • Olshen, A.B.1    Venkatraman, E.S.2    Lucito, R.3    Wigler, M.4
  • 42
    • 58149112821 scopus 로고    scopus 로고
    • Functional copy-number alterations in cancer
    • Taylor BS, et al. (2008) Functional copy-number alterations in cancer. PLoS One 3(9):e3179.
    • (2008) PLoS One , vol.3 , Issue.9 , pp. e3179
    • Taylor, B.S.1
  • 43
    • 78649491016 scopus 로고    scopus 로고
    • Stage-specific sensitivity to p53 restoration during lung cancer progression
    • Feldser DM, et al. (2010) Stage-specific sensitivity to p53 restoration during lung cancer progression. Nature 468(7323):572-575.
    • (2010) Nature , vol.468 , Issue.7323 , pp. 572-575
    • Feldser, D.M.1
  • 44
    • 84874835799 scopus 로고    scopus 로고
    • Inhibition of Myc family proteins eradicates KRas-driven lung cancer in mice
    • Soucek L, et al. (2013) Inhibition of Myc family proteins eradicates KRas-driven lung cancer in mice. Genes Dev 27(5):504-513.
    • (2013) Genes Dev , vol.27 , Issue.5 , pp. 504-513
    • Soucek, L.1
  • 45
    • 36248980204 scopus 로고    scopus 로고
    • Characterizing the cancer genome in lung adenocarcinoma
    • Weir BA, et al. (2007) Characterizing the cancer genome in lung adenocarcinoma. Nature 450(7171):893-898.
    • (2007) Nature , vol.450 , Issue.7171 , pp. 893-898
    • Weir, B.A.1
  • 46
    • 84922735816 scopus 로고    scopus 로고
    • In vivo engineering of oncogenic chromosomal rearrangements with the CRISPR/Cas9 system
    • Maddalo D, et al. (2014) In vivo engineering of oncogenic chromosomal rearrangements with the CRISPR/Cas9 system. Nature 516(7531):423-427.
    • (2014) Nature , vol.516 , Issue.7531 , pp. 423-427
    • Maddalo, D.1
  • 47
    • 84933277263 scopus 로고    scopus 로고
    • Applications of the CRISPR-Cas9 system in cancer biology
    • Sánchez-Rivera FJ, Jacks T (2015) Applications of the CRISPR-Cas9 system in cancer biology. Nat Rev Cancer 15(7):387-395.
    • (2015) Nat Rev Cancer , vol.15 , Issue.7 , pp. 387-395
    • Sánchez-Rivera, F.J.1    Jacks, T.2
  • 48
    • 84923118778 scopus 로고    scopus 로고
    • Rapid modelling of cooperating genetic events in cancer through somatic genome editing
    • Sánchez-Rivera FJ, et al. (2014) Rapid modelling of cooperating genetic events in cancer through somatic genome editing. Nature 516(7531):428-431.
    • (2014) Nature , vol.516 , Issue.7531 , pp. 428-431
    • Sánchez-Rivera, F.J.1
  • 49
    • 84928761118 scopus 로고    scopus 로고
    • Cancer immunology. Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer
    • Rizvi NA, et al. (2015) Cancer immunology. Mutational landscape determines sensitivity to PD-1 blockade in non-small cell lung cancer. Science 348(6230):124-128.
    • (2015) Science , vol.348 , Issue.6230 , pp. 124-128
    • Rizvi, N.A.1
  • 50
    • 78651451436 scopus 로고    scopus 로고
    • Endogenous T cell responses to antigens expressed in lung adenocarcinomas delay malignant tumor progression
    • DuPage M, et al. (2011) Endogenous T cell responses to antigens expressed in lung adenocarcinomas delay malignant tumor progression. Cancer Cell 19(1):72-85.
    • (2011) Cancer Cell , vol.19 , Issue.1 , pp. 72-85
    • DuPage, M.1
  • 51
    • 77955603295 scopus 로고    scopus 로고
    • Unlocking short read sequencing for metagenomics
    • Rodrigue S, et al. (2010) Unlocking short read sequencing for metagenomics. PLoS One 5(7):e11840.
    • (2010) PLoS One , vol.5 , Issue.7
    • Rodrigue, S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.