-
1
-
-
84904908113
-
Drawing a high-resolution functional map of adeno-associated virus capsid by massively parallel sequencing
-
Adachi K., Enoki T., Kawano Y., Veraz M., Nakai H. Drawing a high-resolution functional map of adeno-associated virus capsid by massively parallel sequencing. Nat. Commun. 2014, 5:3075.
-
(2014)
Nat. Commun.
, vol.5
, pp. 3075
-
-
Adachi, K.1
Enoki, T.2
Kawano, Y.3
Veraz, M.4
Nakai, H.5
-
2
-
-
76449098262
-
PHENIX: a comprehensive Python-based system for macromolecular structure solution
-
Adams P.D., Afonine P.V., Bunkoczi G., Chen V.B., Davis I.W., Echols N., Headd J.J., Hung L.W., Kapral G.J., Grosse-Kunstleve R.W., McCoy A.J., Moriarty N.W., Oeffner R., Read R.J., Richardson D.C., Richardson J.S., Terwilliger T.C., Zwart P.H. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr. D Biol. Crystallogr. 2010, 66:213-221.
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
Afonine, P.V.2
Bunkoczi, G.3
Chen, V.B.4
Davis, I.W.5
Echols, N.6
Headd, J.J.7
Hung, L.W.8
Kapral, G.J.9
Grosse-Kunstleve, R.W.10
McCoy, A.J.11
Moriarty, N.W.12
Oeffner, R.13
Read, R.J.14
Richardson, D.C.15
Richardson, J.S.16
Terwilliger, T.C.17
Zwart, P.H.18
-
3
-
-
84921522290
-
Identification and mutagenesis of the adeno-associated virus 5 sialic acid binding region
-
Afione S., DiMattia M.A., Halder S., Di Pasquale G., Agbandje-McKenna M., Chiorini J.A. Identification and mutagenesis of the adeno-associated virus 5 sialic acid binding region. J. Virol. 2015, 89:1660-1672.
-
(2015)
J. Virol.
, vol.89
, pp. 1660-1672
-
-
Afione, S.1
DiMattia, M.A.2
Halder, S.3
Di Pasquale, G.4
Agbandje-McKenna, M.5
Chiorini, J.A.6
-
4
-
-
85145123631
-
Correlating structure with function in viral capsid
-
Hodder Arnold, London, J.R. Kerr, S.F. Cotmore, M.E. Bloom, R.M. Linden, C.R. Parrish (Eds.)
-
Agbandje-McKenna M., Chapman M.S. Correlating structure with function in viral capsid. Parvoviruses 2006, 125-139. Hodder Arnold, London. J.R. Kerr, S.F. Cotmore, M.E. Bloom, R.M. Linden, C.R. Parrish (Eds.).
-
(2006)
Parvoviruses
, pp. 125-139
-
-
Agbandje-McKenna, M.1
Chapman, M.S.2
-
6
-
-
0032534013
-
Functional implications of the structure of the murine parvovirus, minute virus of mice
-
Agbandje-McKenna M., Llamas-Saiz A.L., Wang F., Tattersall P., Rossmann M.G. Functional implications of the structure of the murine parvovirus, minute virus of mice. Structure 1998, 6:1369-1381.
-
(1998)
Structure
, vol.6
, pp. 1369-1381
-
-
Agbandje-McKenna, M.1
Llamas-Saiz, A.L.2
Wang, F.3
Tattersall, P.4
Rossmann, M.G.5
-
7
-
-
33748945422
-
The 37/67-kilodalton laminin receptor is a receptor for adeno-associated virus serotypes 8, 2, 3, and 9
-
Akache B., Grimm D., Pandey K., Yant S.R., Xu H., Kay M.A. The 37/67-kilodalton laminin receptor is a receptor for adeno-associated virus serotypes 8, 2, 3, and 9. J. Virol. 2006, 80:9831-9836.
-
(2006)
J. Virol.
, vol.80
, pp. 9831-9836
-
-
Akache, B.1
Grimm, D.2
Pandey, K.3
Yant, S.R.4
Xu, H.5
Kay, M.A.6
-
8
-
-
84875092627
-
Optimization of the capsid of recombinant adeno-associated virus 2 (AAV2) vectors: the final threshold?
-
Aslanidi G.V., Rivers A.E., Ortiz L., Song L., Ling C., Govindasamy L., Van Vliet K., Tan M., Agbandje-McKenna M., Srivastava A. Optimization of the capsid of recombinant adeno-associated virus 2 (AAV2) vectors: the final threshold?. PLoS One 2013, 8:e59142.
-
(2013)
PLoS One
, vol.8
, pp. e59142
-
-
Aslanidi, G.V.1
Rivers, A.E.2
Ortiz, L.3
Song, L.4
Ling, C.5
Govindasamy, L.6
Van Vliet, K.7
Tan, M.8
Agbandje-McKenna, M.9
Srivastava, A.10
-
9
-
-
33748494015
-
Adeno-associated virus type 2 contains an integrin alpha5beta1 binding domain essential for viral cell entry
-
Asokan A., Hamra J.B., Govindasamy L., Agbandje-McKenna M., Samulski R.J. Adeno-associated virus type 2 contains an integrin alpha5beta1 binding domain essential for viral cell entry. J. Virol. 2006, 80:8961-8969.
-
(2006)
J. Virol.
, vol.80
, pp. 8961-8969
-
-
Asokan, A.1
Hamra, J.B.2
Govindasamy, L.3
Agbandje-McKenna, M.4
Samulski, R.J.5
-
10
-
-
0001592496
-
Adenovirus-associated defective virus particles
-
Atchison R.W., Casto B.C., Hammon W.M. Adenovirus-associated defective virus particles. Science 1965, 149:754-756.
-
(1965)
Science
, vol.149
, pp. 754-756
-
-
Atchison, R.W.1
Casto, B.C.2
Hammon, W.M.3
-
11
-
-
0021367037
-
Characterization of the DNA of a defective human parvovirus isolated from a genital site
-
Bantel-Schaal U., zur Hausen H. Characterization of the DNA of a defective human parvovirus isolated from a genital site. Virology 1984, 134:52-63.
-
(1984)
Virology
, vol.134
, pp. 52-63
-
-
Bantel-Schaal, U.1
zur Hausen, H.2
-
12
-
-
84864151821
-
Identification of the galactose binding domain of the adeno-associated virus serotype 9 capsid
-
Bell C.L., Gurda B.L., Van Vliet K., Agbandje-McKenna M., Wilson J.M. Identification of the galactose binding domain of the adeno-associated virus serotype 9 capsid. J. Virol. 2012, 86:7326-7333.
-
(2012)
J. Virol.
, vol.86
, pp. 7326-7333
-
-
Bell, C.L.1
Gurda, B.L.2
Van Vliet, K.3
Agbandje-McKenna, M.4
Wilson, J.M.5
-
13
-
-
0014355039
-
Epidemiology of adenovirus-associated virus infection in a nursery population
-
Blacklow N.R., Hoggan M.D., Kapikian A.Z., Austin J.B., Rowe W.P. Epidemiology of adenovirus-associated virus infection in a nursery population. Am. J. Epidemiol. 1968, 88:368-378.
-
(1968)
Am. J. Epidemiol.
, vol.88
, pp. 368-378
-
-
Blacklow, N.R.1
Hoggan, M.D.2
Kapikian, A.Z.3
Austin, J.B.4
Rowe, W.P.5
-
14
-
-
13444310872
-
Mutational analysis of narrow pores at the fivefold symmetry axes of adeno-associated virus type 2 capsids reveals a dual role in genome packaging and activation of phospholipase A2 activity
-
Bleker S., Sonntag F., Kleinschmidt J.A. Mutational analysis of narrow pores at the fivefold symmetry axes of adeno-associated virus type 2 capsids reveals a dual role in genome packaging and activation of phospholipase A2 activity. J. Virol. 2005, 79:2528-2540.
-
(2005)
J. Virol.
, vol.79
, pp. 2528-2540
-
-
Bleker, S.1
Sonntag, F.2
Kleinschmidt, J.A.3
-
15
-
-
77954976233
-
Prevalence of serum IgG and neutralizing factors against adeno-associated virus (AAV) types 1, 2, 5, 6, 8, and 9 in the healthy population: implications for gene therapy using AAV vectors
-
Boutin S., Monteilhet V., Veron P., Leborgne C., Benveniste O., Montus M.F., Masurier C. Prevalence of serum IgG and neutralizing factors against adeno-associated virus (AAV) types 1, 2, 5, 6, 8, and 9 in the healthy population: implications for gene therapy using AAV vectors. Hum. Gene Ther. 2010, 21:704-712.
-
(2010)
Hum. Gene Ther.
, vol.21
, pp. 704-712
-
-
Boutin, S.1
Monteilhet, V.2
Veron, P.3
Leborgne, C.4
Benveniste, O.5
Montus, M.F.6
Masurier, C.7
-
16
-
-
85145106846
-
The genus dependovirus
-
Hodder Arnold, London, J.R. Kerr, S.F. Cotmore, M.E. Bloom, R.M. Linden, C.R. Parrish (Eds.)
-
Bowles D.E., Rabinowitz J.E., Samulski R.J. The genus dependovirus. Parvoviruses 2006, 15-23. Hodder Arnold, London. J.R. Kerr, S.F. Cotmore, M.E. Bloom, R.M. Linden, C.R. Parrish (Eds.).
-
(2006)
Parvoviruses
, pp. 15-23
-
-
Bowles, D.E.1
Rabinowitz, J.E.2
Samulski, R.J.3
-
17
-
-
84856515432
-
Phase 1 gene therapy for Duchenne muscular dystrophy using a translational optimized AAV vector
-
Bowles D.E., McPhee S.W., Li C., Gray S.J., Samulski J.J., Camp A.S., Li J., Wang B., Monahan P.E., Rabinowitz J.E., Grieger J.C., Govindasamy L., Agbandje-McKenna M., Xiao X., Samulski R.J. Phase 1 gene therapy for Duchenne muscular dystrophy using a translational optimized AAV vector. Mol. Ther. 2012, 20:443-455.
-
(2012)
Mol. Ther.
, vol.20
, pp. 443-455
-
-
Bowles, D.E.1
McPhee, S.W.2
Li, C.3
Gray, S.J.4
Samulski, J.J.5
Camp, A.S.6
Li, J.7
Wang, B.8
Monahan, P.E.9
Rabinowitz, J.E.10
Grieger, J.C.11
Govindasamy, L.12
Agbandje-McKenna, M.13
Xiao, X.14
Samulski, R.J.15
-
18
-
-
0001897686
-
Assessment of phase accuracy by cross validation: the free R value. Methods and applications
-
Brunger A.T. Assessment of phase accuracy by cross validation: the free R value. Methods and applications. Acta Crystallogr. D Biol. Crystallogr. 1993, 49:24-36.
-
(1993)
Acta Crystallogr. D Biol. Crystallogr.
, vol.49
, pp. 24-36
-
-
Brunger, A.T.1
-
19
-
-
3543012707
-
Crystallography & NMR system: a new software suite for macromolecular structure determination
-
Brunger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., Jiang J.S., Kuszewski J., Nilges M., Pannu N.S., Read R.J., Rice L.M., Simonson T., Warren G.L. Crystallography & NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr. 1998, 54:905-921.
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brunger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
20
-
-
0017800252
-
Characterization of adenovirus-associated virus-induced polypeptides in KB cells
-
Buller R.M., Rose J.A. Characterization of adenovirus-associated virus-induced polypeptides in KB cells. J. Virol. 1978, 25:331-338.
-
(1978)
J. Virol.
, vol.25
, pp. 331-338
-
-
Buller, R.M.1
Rose, J.A.2
-
21
-
-
58849086758
-
Worldwide epidemiology of neutralizing antibodies to adeno-associated viruses
-
Calcedo R., Vandenberghe L.H., Gao G., Lin J., Wilson J.M. Worldwide epidemiology of neutralizing antibodies to adeno-associated viruses. J. Infect. Dis. 2009, 199:381-390.
-
(2009)
J. Infect. Dis.
, vol.199
, pp. 381-390
-
-
Calcedo, R.1
Vandenberghe, L.H.2
Gao, G.3
Lin, J.4
Wilson, J.M.5
-
22
-
-
58149182734
-
VIPERdb2: an enhanced and web API enabled relational database for structural virology
-
Carrillo-Tripp M., Shepherd C.M., Borelli I.A., Venkataraman S., Lander G., Natarajan P., Johnson J.E., Brooks C.L., Reddy V.S. VIPERdb2: an enhanced and web API enabled relational database for structural virology. Nucleic Acids Res. 2009, 37:D436-D442.
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. D436-D442
-
-
Carrillo-Tripp, M.1
Shepherd, C.M.2
Borelli, I.A.3
Venkataraman, S.4
Lander, G.5
Natarajan, P.6
Johnson, J.E.7
Brooks, C.L.8
Reddy, V.S.9
-
23
-
-
59749091653
-
Adeno-associated virus vectors and biology of gene delivery
-
Hodder Arnold, London, J.R. Kerr, S.F. Cotmore, M.E. Bloom, R.M. Linden, C.R. Parrish (Eds.)
-
Carter B.J. Adeno-associated virus vectors and biology of gene delivery. Parvoviruses 2006, 497-498. Hodder Arnold, London. J.R. Kerr, S.F. Cotmore, M.E. Bloom, R.M. Linden, C.R. Parrish (Eds.).
-
(2006)
Parvoviruses
, pp. 497-498
-
-
Carter, B.J.1
-
24
-
-
85145134354
-
Atomic structure of viral particles
-
Hodder Arnold, London, J.R. Kerr, S.F. Cotmore, M.E. Bloom, R.M. Linden, C.R. Parrish (Eds.)
-
Chapman M.S., Agbandje-McKenna M. Atomic structure of viral particles. Parvoviruses 2006, 107-123. Hodder Arnold, London. J.R. Kerr, S.F. Cotmore, M.E. Bloom, R.M. Linden, C.R. Parrish (Eds.).
-
(2006)
Parvoviruses
, pp. 107-123
-
-
Chapman, M.S.1
Agbandje-McKenna, M.2
-
25
-
-
74549178560
-
MolProbity: all-atom structure validation for macromolecular crystallography
-
Chen V.B., Arendall W.B., Headd J.J., Keedy D.A., Immormino R.M., Kapral G.J., Murray L.W., Richardson J.S., Richardson D.C. MolProbity: all-atom structure validation for macromolecular crystallography. Acta Crystallogr. D Biol. Crystallogr. 2010, 66:12-21.
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 12-21
-
-
Chen, V.B.1
Arendall, W.B.2
Headd, J.J.3
Keedy, D.A.4
Immormino, R.M.5
Kapral, G.J.6
Murray, L.W.7
Richardson, J.S.8
Richardson, D.C.9
-
26
-
-
84899970268
-
The family Parvoviridae
-
Cotmore S.F., Agbandje-McKenna M., Chiorini J.A., Mukha D.V., Pintel D.J., Qiu J., Soderlund-Venermo M., Tattersall P., Tijssen P., Gatherer D., Davison A.J. The family Parvoviridae. Arch. Virol. 2014, 159:1239-1247.
-
(2014)
Arch. Virol.
, vol.159
, pp. 1239-1247
-
-
Cotmore, S.F.1
Agbandje-McKenna, M.2
Chiorini, J.A.3
Mukha, D.V.4
Pintel, D.J.5
Qiu, J.6
Soderlund-Venermo, M.7
Tattersall, P.8
Tijssen, P.9
Gatherer, D.10
Davison, A.J.11
-
27
-
-
36749033228
-
The state of the art of adeno-associated virus-based vectors in gene therapy
-
Coura Rdos S., Nardi N.B. The state of the art of adeno-associated virus-based vectors in gene therapy. Virol. J. 2007, 4:99.
-
(2007)
Virol. J.
, vol.4
, pp. 99
-
-
Coura Rdos, S.1
Nardi, N.B.2
-
28
-
-
54249126862
-
Gene therapy using adeno-associated virus vectors
-
Daya S., Berns K.I. Gene therapy using adeno-associated virus vectors. Clin. Microbiol. Rev. 2008, 21:583-593.
-
(2008)
Clin. Microbiol. Rev.
, vol.21
, pp. 583-593
-
-
Daya, S.1
Berns, K.I.2
-
30
-
-
84864003612
-
Structural insight into the unique properties of adeno-associated virus serotype 9
-
DiMattia M.A., Nam H.J., Van Vliet K., Mitchell M., Bennett A., Gurda B.L., McKenna R., Olson N.H., Sinkovits R.S., Potter M., Byrne B.J., Aslanidi G., Zolotukhin S., Muzyczka N., Baker T.S., Agbandje-McKenna M. Structural insight into the unique properties of adeno-associated virus serotype 9. J. Virol. 2012, 86:6947-6958.
-
(2012)
J. Virol.
, vol.86
, pp. 6947-6958
-
-
DiMattia, M.A.1
Nam, H.J.2
Van Vliet, K.3
Mitchell, M.4
Bennett, A.5
Gurda, B.L.6
McKenna, R.7
Olson, N.H.8
Sinkovits, R.S.9
Potter, M.10
Byrne, B.J.11
Aslanidi, G.12
Zolotukhin, S.13
Muzyczka, N.14
Baker, T.S.15
Agbandje-McKenna, M.16
-
31
-
-
43949105839
-
Surface loop dynamics in adeno-associated virus capsid assembly
-
DiPrimio N., Asokan A., Govindasamy L., Agbandje-McKenna M., Samulski R.J. Surface loop dynamics in adeno-associated virus capsid assembly. J. Virol. 2008, 82:5178-5189.
-
(2008)
J. Virol.
, vol.82
, pp. 5178-5189
-
-
DiPrimio, N.1
Asokan, A.2
Govindasamy, L.3
Agbandje-McKenna, M.4
Samulski, R.J.5
-
32
-
-
77949535720
-
Features and development of Coot
-
Emsley P., Lohkamp B., Scott W.G., Cowtan K. Features and development of Coot. Acta Crystallogr. D Biol. Crystallogr. 2010, 66:486-501.
-
(2010)
Acta Crystallogr. D Biol. Crystallogr.
, vol.66
, pp. 486-501
-
-
Emsley, P.1
Lohkamp, B.2
Scott, W.G.3
Cowtan, K.4
-
33
-
-
0029151404
-
Adeno-associated virus vectors for gene therapy
-
Flotte T.R., Carter B.J. Adeno-associated virus vectors for gene therapy. Gene Ther. 1995, 2:357-362.
-
(1995)
Gene Ther.
, vol.2
, pp. 357-362
-
-
Flotte, T.R.1
Carter, B.J.2
-
34
-
-
60149106907
-
Intravascular AAV9 preferentially targets neonatal neurons and adult astrocytes
-
Foust K.D., Nurre E., Montgomery C.L., Hernandez A., Chan C.M., Kaspar B.K. Intravascular AAV9 preferentially targets neonatal neurons and adult astrocytes. Nat. Biotechnol. 2009, 27:59-65.
-
(2009)
Nat. Biotechnol.
, vol.27
, pp. 59-65
-
-
Foust, K.D.1
Nurre, E.2
Montgomery, C.L.3
Hernandez, A.4
Chan, C.M.5
Kaspar, B.K.6
-
35
-
-
2642512201
-
Clades of adeno-associated viruses are widely disseminated in human tissues
-
Gao G., Vandenberghe L.H., Alvira M.R., Lu Y., Calcedo R., Zhou X., Wilson J.M. Clades of adeno-associated viruses are widely disseminated in human tissues. J. Virol. 2004, 78:6381-6388.
-
(2004)
J. Virol.
, vol.78
, pp. 6381-6388
-
-
Gao, G.1
Vandenberghe, L.H.2
Alvira, M.R.3
Lu, Y.4
Calcedo, R.5
Zhou, X.6
Wilson, J.M.7
-
36
-
-
0037015049
-
Novel adeno-associated viruses from rhesus monkeys as vectors for human gene therapy
-
Gao G.P., Alvira M.R., Wang L., Calcedo R., Johnston J., Wilson J.M. Novel adeno-associated viruses from rhesus monkeys as vectors for human gene therapy. Proc. Natl. Acad. Sci. U.S.A. 2002, 99:11854-11859.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 11854-11859
-
-
Gao, G.P.1
Alvira, M.R.2
Wang, L.3
Calcedo, R.4
Johnston, J.5
Wilson, J.M.6
-
37
-
-
0021340974
-
Analysis of proteins, helper dependence, and seroepidemiology of a new human parvovirus
-
Georg-Fries B., Biederlack S., Wolf J., zur Hausen H. Analysis of proteins, helper dependence, and seroepidemiology of a new human parvovirus. Virology 1984, 134:64-71.
-
(1984)
Virology
, vol.134
, pp. 64-71
-
-
Georg-Fries, B.1
Biederlack, S.2
Wolf, J.3
zur Hausen, H.4
-
38
-
-
78049526068
-
Transduction of the inner mouse retina using AAVrh8 and AAVrh10 via intravitreal injection
-
Giove T.J., Sena-Esteves M., Eldred W.D. Transduction of the inner mouse retina using AAVrh8 and AAVrh10 via intravitreal injection. Exp. Eye Res. 2010, 91:652-659.
-
(2010)
Exp. Eye Res.
, vol.91
, pp. 652-659
-
-
Giove, T.J.1
Sena-Esteves, M.2
Eldred, W.D.3
-
39
-
-
0032870158
-
Genetic capsid modifications allow efficient re-targeting of adeno-associated virus type 2
-
Girod A., Ried M., Wobus C., Lahm H., Leike K., Kleinschmidt J., Deleage G., Hallek M. Genetic capsid modifications allow efficient re-targeting of adeno-associated virus type 2. Nat. Med. 1999, 5:1052-1056.
-
(1999)
Nat. Med.
, vol.5
, pp. 1052-1056
-
-
Girod, A.1
Ried, M.2
Wobus, C.3
Lahm, H.4
Leike, K.5
Kleinschmidt, J.6
Deleage, G.7
Hallek, M.8
-
40
-
-
33751210120
-
Structurally mapping the diverse phenotype of adeno-associated virus serotype 4
-
Govindasamy L., Padron E., McKenna R., Muzyczka N., Kaludov N., Chiorini J.A., Agbandje-McKenna M. Structurally mapping the diverse phenotype of adeno-associated virus serotype 4. J. Virol. 2006, 80:11556-11570.
-
(2006)
J. Virol.
, vol.80
, pp. 11556-11570
-
-
Govindasamy, L.1
Padron, E.2
McKenna, R.3
Muzyczka, N.4
Kaludov, N.5
Chiorini, J.A.6
Agbandje-McKenna, M.7
-
41
-
-
84886935681
-
Structural insights into adeno-associated virus serotype 5
-
Govindasamy L., DiMattia M.A., Gurda B.L., Halder S., McKenna R., Chiorini J.A., Muzyczka N., Zolotukhin S., Agbandje-McKenna M. Structural insights into adeno-associated virus serotype 5. J. Virol. 2013, 87:11187-11199.
-
(2013)
J. Virol.
, vol.87
, pp. 11187-11199
-
-
Govindasamy, L.1
DiMattia, M.A.2
Gurda, B.L.3
Halder, S.4
McKenna, R.5
Chiorini, J.A.6
Muzyczka, N.7
Zolotukhin, S.8
Agbandje-McKenna, M.9
-
42
-
-
33646719922
-
Separate basic region motifs within the adeno-associated virus capsid proteins are essential for infectivity and assembly
-
Grieger J.C., Snowdy S., Samulski R.J. Separate basic region motifs within the adeno-associated virus capsid proteins are essential for infectivity and assembly. J. Virol. 2006, 80:5199-5210.
-
(2006)
J. Virol.
, vol.80
, pp. 5199-5210
-
-
Grieger, J.C.1
Snowdy, S.2
Samulski, R.J.3
-
43
-
-
84864387256
-
Mapping a neutralizing epitope onto the capsid of adeno-associated virus serotype 8
-
Gurda B.L., Raupp C., Popa-Wagner R., Naumer M., Olson N.H., Ng R., McKenna R., Baker T.S., Kleinschmidt J.A., Agbandje-McKenna M. Mapping a neutralizing epitope onto the capsid of adeno-associated virus serotype 8. J. Virol. 2012, 86:7739-7751.
-
(2012)
J. Virol.
, vol.86
, pp. 7739-7751
-
-
Gurda, B.L.1
Raupp, C.2
Popa-Wagner, R.3
Naumer, M.4
Olson, N.H.5
Ng, R.6
McKenna, R.7
Baker, T.S.8
Kleinschmidt, J.A.9
Agbandje-McKenna, M.10
-
44
-
-
84881247172
-
Capsid antibodies to different adeno-associated virus serotypes bind common regions
-
Gurda B.L., DiMattia M.A., Miller E.B., Bennett A., McKenna R., Weichert W.S., Nelson C.D., Chen W.J., Muzyczka N., Olson N.H., Sinkovits R.S., Chiorini J.A., Zolotutkhin S., Kozyreva O.G., Samulski R.J., Baker T.S., Parrish C.R., Agbandje-McKenna M. Capsid antibodies to different adeno-associated virus serotypes bind common regions. J. Virol. 2013, 87:9111-9124.
-
(2013)
J. Virol.
, vol.87
, pp. 9111-9124
-
-
Gurda, B.L.1
DiMattia, M.A.2
Miller, E.B.3
Bennett, A.4
McKenna, R.5
Weichert, W.S.6
Nelson, C.D.7
Chen, W.J.8
Muzyczka, N.9
Olson, N.H.10
Sinkovits, R.S.11
Chiorini, J.A.12
Zolotutkhin, S.13
Kozyreva, O.G.14
Samulski, R.J.15
Baker, T.S.16
Parrish, C.R.17
Agbandje-McKenna, M.18
-
46
-
-
84870951914
-
Production, purification, crystallization and structure determination of H-1 Parvovirus
-
Halder S., Nam H.-J., Govindasamy L., Vogel M., Dinsart C., Salome N., McKenna R., Agbandje-McKenna M. Production, purification, crystallization and structure determination of H-1 Parvovirus. Acta Crystallogr. F 2012, 68:1571-1576.
-
(2012)
Acta Crystallogr. F
, vol.68
, pp. 1571-1576
-
-
Halder, S.1
Nam, H.-J.2
Govindasamy, L.3
Vogel, M.4
Dinsart, C.5
Salome, N.6
McKenna, R.7
Agbandje-McKenna, M.8
-
47
-
-
84876305036
-
Structural characterization of H-1 parvovirus: comparison of infectious virions to empty capsids
-
Halder S., Nam H.J., Govindasamy L., Vogel M., Dinsart C., Salome N., McKenna R., Agbandje-McKenna M. Structural characterization of H-1 parvovirus: comparison of infectious virions to empty capsids. J. Virol. 2013, 87:5128-5140.
-
(2013)
J. Virol.
, vol.87
, pp. 5128-5140
-
-
Halder, S.1
Nam, H.J.2
Govindasamy, L.3
Vogel, M.4
Dinsart, C.5
Salome, N.6
McKenna, R.7
Agbandje-McKenna, M.8
-
48
-
-
0033885967
-
Adeno-associated virus (AAV)-3-based vectors transduce haematopoietic cells not susceptible to transduction with AAV-2-based vectors
-
Handa A., Muramatsu S., Qiu J., Mizukami H., Brown K.E. Adeno-associated virus (AAV)-3-based vectors transduce haematopoietic cells not susceptible to transduction with AAV-2-based vectors. J. Gen. Virol. 2000, 81:2077-2084.
-
(2000)
J. Gen. Virol.
, vol.81
, pp. 2077-2084
-
-
Handa, A.1
Muramatsu, S.2
Qiu, J.3
Mizukami, H.4
Brown, K.E.5
-
49
-
-
0013914098
-
Studies of small DNA viruses found in various adenovirus preparations: physical, biological, and immunological characteristics
-
Hoggan M.D., Blacklow N.R., Rowe W.P. Studies of small DNA viruses found in various adenovirus preparations: physical, biological, and immunological characteristics. Proc. Natl. Acad. Sci. U.S.A. 1966, 55:1467-1474.
-
(1966)
Proc. Natl. Acad. Sci. U.S.A.
, vol.55
, pp. 1467-1474
-
-
Hoggan, M.D.1
Blacklow, N.R.2
Rowe, W.P.3
-
50
-
-
84862526741
-
Tyrosine cross-linking reveals interfacial dynamics in adeno-associated viral capsids during infection
-
Horowitz E.D., Finn M.G., Asokan A. Tyrosine cross-linking reveals interfacial dynamics in adeno-associated viral capsids during infection. ACS Chem. Biol. 2012, 7:1059-1066.
-
(2012)
ACS Chem. Biol.
, vol.7
, pp. 1059-1066
-
-
Horowitz, E.D.1
Finn, M.G.2
Asokan, A.3
-
51
-
-
77956628142
-
RH10 provides superior transgene expression in mice when compared with natural AAV serotypes for neonatal gene therapy
-
Hu C., Busuttil R.W., Lipshutz G.S. RH10 provides superior transgene expression in mice when compared with natural AAV serotypes for neonatal gene therapy. J. Gene Med. 2010, 12:766-778.
-
(2010)
J. Gene Med.
, vol.12
, pp. 766-778
-
-
Hu, C.1
Busuttil, R.W.2
Lipshutz, G.S.3
-
53
-
-
0346147026
-
Genetic modifications of the adeno-associated virus type 2 capsid reduce the affinity and the neutralizing effects of human serum antibodies
-
Huttner N.A., Girod A., Perabo L., Edbauer D., Kleinschmidt J.A., Buning H., Hallek M. Genetic modifications of the adeno-associated virus type 2 capsid reduce the affinity and the neutralizing effects of human serum antibodies. Gene Ther. 2003, 10:2139-2147.
-
(2003)
Gene Ther.
, vol.10
, pp. 2139-2147
-
-
Huttner, N.A.1
Girod, A.2
Perabo, L.3
Edbauer, D.4
Kleinschmidt, J.A.5
Buning, H.6
Hallek, M.7
-
54
-
-
0015193563
-
Structural proteins of adenovirus-associated virus type 3
-
Johnson F.B., Ozer H.L., Hoggan M.D. Structural proteins of adenovirus-associated virus type 3. J. Virol. 1971, 8:860-863.
-
(1971)
J. Virol.
, vol.8
, pp. 860-863
-
-
Johnson, F.B.1
Ozer, H.L.2
Hoggan, M.D.3
-
55
-
-
0141454787
-
Identification of a heparin-binding motif on adeno-associated virus type 2 capsids
-
Kern A., Schmidt K., Leder C., Muller O.J., Wobus C.E., Bettinger K., Von der Lieth C.W., King J.A., Kleinschmidt J.A. Identification of a heparin-binding motif on adeno-associated virus type 2 capsids. J. Virol. 2003, 77:11072-11081.
-
(2003)
J. Virol.
, vol.77
, pp. 11072-11081
-
-
Kern, A.1
Schmidt, K.2
Leder, C.3
Muller, O.J.4
Wobus, C.E.5
Bettinger, K.6
Von der Lieth, C.W.7
King, J.A.8
Kleinschmidt, J.A.9
-
56
-
-
0030845843
-
Model building and refinement practice
-
Kleywegt G.J., Jones T.A. Model building and refinement practice. Methods Enzymol. 1997, 277:208-230.
-
(1997)
Methods Enzymol.
, vol.277
, pp. 208-230
-
-
Kleywegt, G.J.1
Jones, T.A.2
-
57
-
-
54849391500
-
DNA shuffling of adeno-associated virus yields functionally diverse viral progeny
-
Koerber J.T., Jang J.H., Schaffer D.V. DNA shuffling of adeno-associated virus yields functionally diverse viral progeny. Mol. Ther. 2008, 16:1703-1709.
-
(2008)
Mol. Ther.
, vol.16
, pp. 1703-1709
-
-
Koerber, J.T.1
Jang, J.H.2
Schaffer, D.V.3
-
58
-
-
79957909371
-
A potential role of distinctively delayed blood clearance of recombinant adeno-associated virus serotype 9 in robust cardiac transduction
-
Kotchey N.M., Adachi K., Zahid M., Inagaki K., Charan R., Parker R.S., Nakai H. A potential role of distinctively delayed blood clearance of recombinant adeno-associated virus serotype 9 in robust cardiac transduction. Mol. Ther. 2011, 19:1079-1089.
-
(2011)
Mol. Ther.
, vol.19
, pp. 1079-1089
-
-
Kotchey, N.M.1
Adachi, K.2
Zahid, M.3
Inagaki, K.4
Charan, R.5
Parker, R.S.6
Nakai, H.7
-
59
-
-
13444307044
-
Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions
-
Krissinel E., Henrick K. Secondary-structure matching (SSM), a new tool for fast protein structure alignment in three dimensions. Acta Crystallogr. D Biol. Crystallogr. 2004, 60:2256-2268.
-
(2004)
Acta Crystallogr. D Biol. Crystallogr.
, vol.60
, pp. 2256-2268
-
-
Krissinel, E.1
Henrick, K.2
-
60
-
-
0034747267
-
Electron cryo-microscopy and image reconstruction of adeno-associated virus type 2 empty capsids
-
Kronenberg S., Kleinschmidt J.A., Bottcher B. Electron cryo-microscopy and image reconstruction of adeno-associated virus type 2 empty capsids. EMBO Rep. 2001, 2:997-1002.
-
(2001)
EMBO Rep.
, vol.2
, pp. 997-1002
-
-
Kronenberg, S.1
Kleinschmidt, J.A.2
Bottcher, B.3
-
61
-
-
17444405970
-
A conformational change in the adeno-associated virus type 2 capsid leads to the exposure of hidden VP1 N termini
-
Kronenberg S., Bottcher B., von der Lieth C.W., Bleker S., Kleinschmidt J.A. A conformational change in the adeno-associated virus type 2 capsid leads to the exposure of hidden VP1 N termini. J. Virol. 2005, 79:5296-5303.
-
(2005)
J. Virol.
, vol.79
, pp. 5296-5303
-
-
Kronenberg, S.1
Bottcher, B.2
von der Lieth, C.W.3
Bleker, S.4
Kleinschmidt, J.A.5
-
62
-
-
84855341055
-
Identification of the heparin binding site on adeno-associated virus serotype 3B (AAV-3B)
-
Lerch T.F., Chapman M.S. Identification of the heparin binding site on adeno-associated virus serotype 3B (AAV-3B). Virology 2012, 423:6-13.
-
(2012)
Virology
, vol.423
, pp. 6-13
-
-
Lerch, T.F.1
Chapman, M.S.2
-
63
-
-
77953285729
-
The structure of adeno-associated virus serotype 3B (AAV-3B): insights into receptor binding and immune evasion
-
Lerch T.F., Xie Q., Chapman M.S. The structure of adeno-associated virus serotype 3B (AAV-3B): insights into receptor binding and immune evasion. Virology 2010, 403:26-36.
-
(2010)
Virology
, vol.403
, pp. 26-36
-
-
Lerch, T.F.1
Xie, Q.2
Chapman, M.S.3
-
64
-
-
45749099260
-
Engineering and selection of shuffled AAV genomes: a new strategy for producing targeted biological nanoparticles
-
Li W., Asokan A., Wu Z., Van Dyke T., DiPrimio N., Johnson J.S., Govindaswamy L., Agbandje-McKenna M., Leichtle S., Redmond D.E., McCown T.J., Petermann K.B., Sharpless N.E., Samulski R.J. Engineering and selection of shuffled AAV genomes: a new strategy for producing targeted biological nanoparticles. Mol. Ther. 2008, 16:1252-1260.
-
(2008)
Mol. Ther.
, vol.16
, pp. 1252-1260
-
-
Li, W.1
Asokan, A.2
Wu, Z.3
Van Dyke, T.4
DiPrimio, N.5
Johnson, J.S.6
Govindaswamy, L.7
Agbandje-McKenna, M.8
Leichtle, S.9
Redmond, D.E.10
McCown, T.J.11
Petermann, K.B.12
Sharpless, N.E.13
Samulski, R.J.14
-
65
-
-
30344450073
-
Mutations on the external surfaces of adeno-associated virus type 2 capsids that affect transduction and neutralization
-
Lochrie M.A., Tatsuno G.P., Christie B., McDonnell J.W., Zhou S., Surosky R., Pierce G.F., Colosi P. Mutations on the external surfaces of adeno-associated virus type 2 capsids that affect transduction and neutralization. J. Virol. 2006, 80:821-834.
-
(2006)
J. Virol.
, vol.80
, pp. 821-834
-
-
Lochrie, M.A.1
Tatsuno, G.P.2
Christie, B.3
McDonnell, J.W.4
Zhou, S.5
Surosky, R.6
Pierce, G.F.7
Colosi, P.8
-
66
-
-
73949097812
-
Optimization of stealth adeno-associated virus vectors by randomization of immunogenic epitopes
-
Maersch S., Huber A., Buning H., Hallek M., Perabo L. Optimization of stealth adeno-associated virus vectors by randomization of immunogenic epitopes. Virology 2010, 397:167-175.
-
(2010)
Virology
, vol.397
, pp. 167-175
-
-
Maersch, S.1
Huber, A.2
Buning, H.3
Hallek, M.4
Perabo, L.5
-
67
-
-
32344438754
-
Directed evolution of adeno-associated virus yields enhanced gene delivery vectors
-
Maheshri N., Koerber J.T., Kaspar B.K., Schaffer D.V. Directed evolution of adeno-associated virus yields enhanced gene delivery vectors. Nat. Biotechnol. 2006, 24:198-204.
-
(2006)
Nat. Biotechnol.
, vol.24
, pp. 198-204
-
-
Maheshri, N.1
Koerber, J.T.2
Kaspar, B.K.3
Schaffer, D.V.4
-
68
-
-
0014432781
-
Solvent content of protein crystals
-
Matthews B.W. Solvent content of protein crystals. J. Mol. Biol. 1968, 33:491-497.
-
(1968)
J. Mol. Biol.
, vol.33
, pp. 491-497
-
-
Matthews, B.W.1
-
69
-
-
84862329652
-
Structure of adeno-associated virus-2 in complex with neutralizing monoclonal antibody A20
-
McCraw D.M., O'Donnell J.K., Taylor K.A., Stagg S.M., Chapman M.S. Structure of adeno-associated virus-2 in complex with neutralizing monoclonal antibody A20. Virology 2012, 431:40-49.
-
(2012)
Virology
, vol.431
, pp. 40-49
-
-
McCraw, D.M.1
O'Donnell, J.K.2
Taylor, K.A.3
Stagg, S.M.4
Chapman, M.S.5
-
71
-
-
0000376931
-
Association of 20-millimicron particles with adenoviruses
-
Melnick J.L., Mayor H.D., Smith K.O., Rapp F. Association of 20-millimicron particles with adenoviruses. J. Bacteriol. 1965, 90:271-274.
-
(1965)
J. Bacteriol.
, vol.90
, pp. 271-274
-
-
Melnick, J.L.1
Mayor, H.D.2
Smith, K.O.3
Rapp, F.4
-
72
-
-
71549132206
-
Adeno-associated viral vectors and their redirection to cell-type specific receptors
-
Michelfelder S., Trepel M. Adeno-associated viral vectors and their redirection to cell-type specific receptors. Adv. Genet. 2009, 67:29-60.
-
(2009)
Adv. Genet.
, vol.67
, pp. 29-60
-
-
Michelfelder, S.1
Trepel, M.2
-
73
-
-
84899928403
-
The structure of AAVrh32.33, a novel gene delivery vector
-
Mikals K., Nam H.J., Van Vliet K., Vandenberghe L.H., Mays L.E., McKenna R., Wilson J.M., Agbandje-McKenna M. The structure of AAVrh32.33, a novel gene delivery vector. J. Struct. Biol. 2014, 186:308-317.
-
(2014)
J. Struct. Biol.
, vol.186
, pp. 308-317
-
-
Mikals, K.1
Nam, H.J.2
Van Vliet, K.3
Vandenberghe, L.H.4
Mays, L.E.5
McKenna, R.6
Wilson, J.M.7
Agbandje-McKenna, M.8
-
74
-
-
79954622209
-
Therapeutic in vivo gene transfer for genetic disease using AAV: progress and challenges
-
Mingozzi F., High K.A. Therapeutic in vivo gene transfer for genetic disease using AAV: progress and challenges. Nat. Rev. Genet. 2011, 12:341-355.
-
(2011)
Nat. Rev. Genet.
, vol.12
, pp. 341-355
-
-
Mingozzi, F.1
High, K.A.2
-
75
-
-
9644265332
-
Two novel adeno-associated viruses from cynomolgus monkey: pseudotyping characterization of capsid protein
-
Mori S., Wang L., Takeuchi T., Kanda T. Two novel adeno-associated viruses from cynomolgus monkey: pseudotyping characterization of capsid protein. Virology 2004, 330:375-383.
-
(2004)
Virology
, vol.330
, pp. 375-383
-
-
Mori, S.1
Wang, L.2
Takeuchi, T.3
Kanda, T.4
-
76
-
-
0033920298
-
Epitope mapping of human anti-adeno-associated virus type 2 neutralizing antibodies: implications for gene therapy and virus structure
-
Moskalenko M., Chen L., van Roey M., Donahue B.A., Snyder R.O., McArthur J.G., Patel S.D. Epitope mapping of human anti-adeno-associated virus type 2 neutralizing antibodies: implications for gene therapy and virus structure. J. Virol. 2000, 74:1761-1766.
-
(2000)
J. Virol.
, vol.74
, pp. 1761-1766
-
-
Moskalenko, M.1
Chen, L.2
van Roey, M.3
Donahue, B.A.4
Snyder, R.O.5
McArthur, J.G.6
Patel, S.D.7
-
77
-
-
44049094771
-
Clinical gene therapy using recombinant adeno-associated virus vectors
-
Mueller C., Flotte T.R. Clinical gene therapy using recombinant adeno-associated virus vectors. Gene Ther. 2008, 15:858-863.
-
(2008)
Gene Ther.
, vol.15
, pp. 858-863
-
-
Mueller, C.1
Flotte, T.R.2
-
78
-
-
0030198916
-
Nucleotide sequencing and generation of an infectious clone of adeno-associated virus 3
-
Muramatsu S., Mizukami H., Young N.S., Brown K.E. Nucleotide sequencing and generation of an infectious clone of adeno-associated virus 3. Virology 1996, 221:208-217.
-
(1996)
Virology
, vol.221
, pp. 208-217
-
-
Muramatsu, S.1
Mizukami, H.2
Young, N.S.3
Brown, K.E.4
-
79
-
-
80655142508
-
Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking
-
Nam H.J., Gurda B.L., McKenna R., Potter M., Byrne B., Salganik M., Muzyczka N., Agbandje-McKenna M. Structural studies of adeno-associated virus serotype 8 capsid transitions associated with endosomal trafficking. J. Virol. 2011, 85:11791-11799.
-
(2011)
J. Virol.
, vol.85
, pp. 11791-11799
-
-
Nam, H.J.1
Gurda, B.L.2
McKenna, R.3
Potter, M.4
Byrne, B.5
Salganik, M.6
Muzyczka, N.7
Agbandje-McKenna, M.8
-
80
-
-
36049020398
-
Structure of adeno-associated virus serotype 8, a gene therapy vector
-
Nam H.J., Lane M.D., Padron E., Gurda B., McKenna R., Kohlbrenner E., Aslanidi G., Byrne B., Muzyczka N., Zolotukhin S., Agbandje-McKenna M. Structure of adeno-associated virus serotype 8, a gene therapy vector. J. Virol. 2007, 81:12260-12271.
-
(2007)
J. Virol.
, vol.81
, pp. 12260-12271
-
-
Nam, H.J.1
Lane, M.D.2
Padron, E.3
Gurda, B.4
McKenna, R.5
Kohlbrenner, E.6
Aslanidi, G.7
Byrne, B.8
Muzyczka, N.9
Zolotukhin, S.10
Agbandje-McKenna, M.11
-
81
-
-
84855161388
-
Adenovirus-associated virus vector-mediated gene transfer in hemophilia B
-
Nathwani A.C., Tuddenham E.G., Rangarajan S., Rosales C., McIntosh J., Linch D.C., Chowdary P., Riddell A., Pie A.J., Harrington C., O'Beirne J., Smith K., Pasi J., Glader B., Rustagi P., Ng C.Y., Kay M.A., Zhou J., Spence Y., Morton C.L., Allay J., Coleman J., Sleep S., Cunningham J.M., Srivastava D., Basner-Tschakarjan E., Mingozzi F., High K.A., Gray J.T., Reiss U.M., Nienhuis A.W., Davidoff A.M. Adenovirus-associated virus vector-mediated gene transfer in hemophilia B. N. Engl. J. Med. 2011, 365:2357-2365.
-
(2011)
N. Engl. J. Med.
, vol.365
, pp. 2357-2365
-
-
Nathwani, A.C.1
Tuddenham, E.G.2
Rangarajan, S.3
Rosales, C.4
McIntosh, J.5
Linch, D.C.6
Chowdary, P.7
Riddell, A.8
Pie, A.J.9
Harrington, C.10
O'Beirne, J.11
Smith, K.12
Pasi, J.13
Glader, B.14
Rustagi, P.15
Ng, C.Y.16
Kay, M.A.17
Zhou, J.18
Spence, Y.19
Morton, C.L.20
Allay, J.21
Coleman, J.22
Sleep, S.23
Cunningham, J.M.24
Srivastava, D.25
Basner-Tschakarjan, E.26
Mingozzi, F.27
High, K.A.28
Gray, J.T.29
Reiss, U.M.30
Nienhuis, A.W.31
Davidoff, A.M.32
more..
-
82
-
-
78649402995
-
Structural characterization of the dual glycan binding adeno-associated virus serotype 6
-
Ng R., Govindasamy L., Gurda B.L., McKenna R., Kozyreva O.G., Samulski R.J., Parent K.N., Baker T.S., Agbandje-McKenna M. Structural characterization of the dual glycan binding adeno-associated virus serotype 6. J. Virol. 2010, 84:12945-12957.
-
(2010)
J. Virol.
, vol.84
, pp. 12945-12957
-
-
Ng, R.1
Govindasamy, L.2
Gurda, B.L.3
McKenna, R.4
Kozyreva, O.G.5
Samulski, R.J.6
Parent, K.N.7
Baker, T.S.8
Agbandje-McKenna, M.9
-
83
-
-
0038618725
-
Identification of amino acid residues in the capsid proteins of adeno-associated virus type 2 that contribute to heparan sulfate proteoglycan binding
-
Opie S.R., Warrington K.H., Agbandje-McKenna M., Zolotukhin S., Muzyczka N. Identification of amino acid residues in the capsid proteins of adeno-associated virus type 2 that contribute to heparan sulfate proteoglycan binding. J. Virol. 2003, 77:6995-7006.
-
(2003)
J. Virol.
, vol.77
, pp. 6995-7006
-
-
Opie, S.R.1
Warrington, K.H.2
Agbandje-McKenna, M.3
Zolotukhin, S.4
Muzyczka, N.5
-
84
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z., Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 1997, 276:307-326.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
85
-
-
20144387791
-
Structure of adeno-associated virus type 4
-
Padron E., Bowman V., Kaludov N., Govindasamy L., Levy H., Nick P., McKenna R., Muzyczka N., Chiorini J.A., Baker T.S., Agbandje-McKenna M. Structure of adeno-associated virus type 4. J. Virol. 2005, 79:5047-5058.
-
(2005)
J. Virol.
, vol.79
, pp. 5047-5058
-
-
Padron, E.1
Bowman, V.2
Kaludov, N.3
Govindasamy, L.4
Levy, H.5
Nick, P.6
McKenna, R.7
Muzyczka, N.8
Chiorini, J.A.9
Baker, T.S.10
Agbandje-McKenna, M.11
-
86
-
-
32844470411
-
Combinatorial engineering of a gene therapy vector: directed evolution of adeno-associated virus
-
Perabo L., Endell J., King S., Lux K., Goldnau D., Hallek M., Buning H. Combinatorial engineering of a gene therapy vector: directed evolution of adeno-associated virus. J. Gene Med. 2006, 8:155-162.
-
(2006)
J. Gene Med.
, vol.8
, pp. 155-162
-
-
Perabo, L.1
Endell, J.2
King, S.3
Lux, K.4
Goldnau, D.5
Hallek, M.6
Buning, H.7
-
87
-
-
4444221565
-
UCSF Chimera - a visualization system for exploratory research and analysis
-
Pettersen E.F., Goddard T.D., Huang C.C., Couch G.S., Greenblatt D.M., Meng E.C., Ferrin T.E. UCSF Chimera - a visualization system for exploratory research and analysis. J. Comput. Chem. 2004, 25:1605-1612.
-
(2004)
J. Comput. Chem.
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
88
-
-
79957890386
-
Engineering liver-detargeted AAV9 vectors for cardiac and musculoskeletal gene transfer
-
Pulicherla N., Shen S., Yadav S., Debbink K., Govindasamy L., Agbandje-McKenna M., Asokan A. Engineering liver-detargeted AAV9 vectors for cardiac and musculoskeletal gene transfer. Mol. Ther. 2011, 19:1070-1078.
-
(2011)
Mol. Ther.
, vol.19
, pp. 1070-1078
-
-
Pulicherla, N.1
Shen, S.2
Yadav, S.3
Debbink, K.4
Govindasamy, L.5
Agbandje-McKenna, M.6
Asokan, A.7
-
89
-
-
0036140216
-
Cross-packaging of a single adeno-associated virus (AAV) type 2 vector genome into multiple AAV serotypes enables transduction with broad specificity
-
Rabinowitz J.E., Rolling F., Li C., Conrath H., Xiao W., Xiao X., Samulski R.J. Cross-packaging of a single adeno-associated virus (AAV) type 2 vector genome into multiple AAV serotypes enables transduction with broad specificity. J. Virol. 2002, 76:791-801.
-
(2002)
J. Virol.
, vol.76
, pp. 791-801
-
-
Rabinowitz, J.E.1
Rolling, F.2
Li, C.3
Conrath, H.4
Xiao, W.5
Xiao, X.6
Samulski, R.J.7
-
90
-
-
84866169735
-
The threefold protrusions of adeno-associated virus type 8 are involved in cell surface targeting as well as postattachment processing
-
Raupp C., Naumer M., Muller O.J., Gurda B.L., Agbandje-McKenna M., Kleinschmidt J.A. The threefold protrusions of adeno-associated virus type 8 are involved in cell surface targeting as well as postattachment processing. J. Virol. 2012, 86:9396-9408.
-
(2012)
J. Virol.
, vol.86
, pp. 9396-9408
-
-
Raupp, C.1
Naumer, M.2
Muller, O.J.3
Gurda, B.L.4
Agbandje-McKenna, M.5
Kleinschmidt, J.A.6
-
91
-
-
0015156647
-
Structural proteins of adenovirus-associated viruses
-
Rose J.A., Maizel J.V., Inman J.K., Shatkin A.J. Structural proteins of adenovirus-associated viruses. J. Virol. 1971, 8:766-770.
-
(1971)
J. Virol.
, vol.8
, pp. 766-770
-
-
Rose, J.A.1
Maizel, J.V.2
Inman, J.K.3
Shatkin, A.J.4
-
92
-
-
0002660809
-
The detection of sub-units within the crystallographic asymmetric unit
-
Rossmann M.G., Blow D.M. The detection of sub-units within the crystallographic asymmetric unit. Acta Crystallogr. 1962, 15:24-31.
-
(1962)
Acta Crystallogr.
, vol.15
, pp. 24-31
-
-
Rossmann, M.G.1
Blow, D.M.2
-
93
-
-
0026853306
-
Molecular replacement real-space averaging
-
Rossmann M.G., McKenna R., Tong L., Xia D., Dai J., Wu H., Choi H.K., Lynch R.E. Molecular replacement real-space averaging. J. Appl. Crystallogr. 1992, 25:166-180.
-
(1992)
J. Appl. Crystallogr.
, vol.25
, pp. 166-180
-
-
Rossmann, M.G.1
McKenna, R.2
Tong, L.3
Xia, D.4
Dai, J.5
Wu, H.6
Choi, H.K.7
Lynch, R.E.8
-
94
-
-
0031984786
-
Infectious clones and vectors derived from adeno-associated virus (AAV) serotypes other than AAV type 2
-
Rutledge E.A., Halbert C.L., Russell D.W. Infectious clones and vectors derived from adeno-associated virus (AAV) serotypes other than AAV type 2. J. Virol. 1998, 72:309-319.
-
(1998)
J. Virol.
, vol.72
, pp. 309-319
-
-
Rutledge, E.A.1
Halbert, C.L.2
Russell, D.W.3
-
95
-
-
84891716579
-
Adeno-associated virus capsid proteins may play a role in transcription and second-strand synthesis of recombinant genomes
-
Salganik M., Aydemir F., Nam H.J., McKenna R., Agbandje-McKenna M., Muzyczka N. Adeno-associated virus capsid proteins may play a role in transcription and second-strand synthesis of recombinant genomes. J. Virol. 2014, 88:1071-1079.
-
(2014)
J. Virol.
, vol.88
, pp. 1071-1079
-
-
Salganik, M.1
Aydemir, F.2
Nam, H.J.3
McKenna, R.4
Agbandje-McKenna, M.5
Muzyczka, N.6
-
96
-
-
84869060596
-
Evidence for pH-dependent protease activity in the adeno-associated virus capsid
-
Salganik M., Venkatakrishnan B., Bennett A., Lins B., Yarbrough J., Muzyczka N., Agbandje-McKenna M., McKenna R. Evidence for pH-dependent protease activity in the adeno-associated virus capsid. J. Virol. 2012, 86:11877-11885.
-
(2012)
J. Virol.
, vol.86
, pp. 11877-11885
-
-
Salganik, M.1
Venkatakrishnan, B.2
Bennett, A.3
Lins, B.4
Yarbrough, J.5
Muzyczka, N.6
Agbandje-McKenna, M.7
McKenna, R.8
-
97
-
-
84893123319
-
Safety profile of recombinant adeno-associated viral vectors: focus on alipogene tiparvovec (Glybera(R))
-
Salmon F., Grosios K., Petry H. Safety profile of recombinant adeno-associated viral vectors: focus on alipogene tiparvovec (Glybera(R)). Expert Rev. Clin. Pharmacol. 2014, 7:53-65.
-
(2014)
Expert Rev. Clin. Pharmacol.
, vol.7
, pp. 53-65
-
-
Salmon, F.1
Grosios, K.2
Petry, H.3
-
98
-
-
38349168183
-
Adeno-associated virus type 12 (AAV12): a novel AAV serotype with sialic acid- and heparan sulfate proteoglycan-independent transduction activity
-
Schmidt M., Voutetakis A., Afione S., Zheng C., Mandikian D., Chiorini J.A. Adeno-associated virus type 12 (AAV12): a novel AAV serotype with sialic acid- and heparan sulfate proteoglycan-independent transduction activity. J. Virol. 2008, 82:1399-1406.
-
(2008)
J. Virol.
, vol.82
, pp. 1399-1406
-
-
Schmidt, M.1
Voutetakis, A.2
Afione, S.3
Zheng, C.4
Mandikian, D.5
Chiorini, J.A.6
-
99
-
-
50149083033
-
Molecular characterization of the heparin-dependent transduction domain on the capsid of a novel adeno-associated virus isolate, AAV(VR-942)
-
Schmidt M., Govindasamy L., Afione S., Kaludov N., Agbandje-McKenna M., Chiorini J.A. Molecular characterization of the heparin-dependent transduction domain on the capsid of a novel adeno-associated virus isolate, AAV(VR-942). J. Virol. 2008, 82:8911-8916.
-
(2008)
J. Virol.
, vol.82
, pp. 8911-8916
-
-
Schmidt, M.1
Govindasamy, L.2
Afione, S.3
Kaludov, N.4
Agbandje-McKenna, M.5
Chiorini, J.A.6
-
100
-
-
84888031467
-
Multiple roles for sialylated glycans in determining the cardiopulmonary tropism of adeno-associated virus 4
-
Shen S., Troupes A.N., Pulicherla N., Asokan A. Multiple roles for sialylated glycans in determining the cardiopulmonary tropism of adeno-associated virus 4. J. Virol. 2013, 87:13206-13213.
-
(2013)
J. Virol.
, vol.87
, pp. 13206-13213
-
-
Shen, S.1
Troupes, A.N.2
Pulicherla, N.3
Asokan, A.4
-
101
-
-
84961290680
-
Functional analysis of the putative integrin recognition motif on adeno-associated virus 9
-
Shen S., Berry G.E., Castellanos Rivera R.M., Cheung R.Y., Troupes A.N., Brown S.M., Kafri T., Asokan A. Functional analysis of the putative integrin recognition motif on adeno-associated virus 9. J. Biol. Chem. 2015, 290:1496-1504.
-
(2015)
J. Biol. Chem.
, vol.290
, pp. 1496-1504
-
-
Shen, S.1
Berry, G.E.2
Castellanos Rivera, R.M.3
Cheung, R.Y.4
Troupes, A.N.5
Brown, S.M.6
Kafri, T.7
Asokan, A.8
-
102
-
-
84901008860
-
Defining the stoichiometry and cargo load of viral and bacterial nanoparticles by Orbitrap mass spectrometry
-
Snijder J., van de Waterbeemd M., Damoc E., Denisov E., Grinfeld D., Bennett A., Agbandje-McKenna M., Makarov A., Heck A.J. Defining the stoichiometry and cargo load of viral and bacterial nanoparticles by Orbitrap mass spectrometry. J. Am. Chem. Soc. 2014, 136:7295-7299.
-
(2014)
J. Am. Chem. Soc.
, vol.136
, pp. 7295-7299
-
-
Snijder, J.1
van de Waterbeemd, M.2
Damoc, E.3
Denisov, E.4
Grinfeld, D.5
Bennett, A.6
Agbandje-McKenna, M.7
Makarov, A.8
Heck, A.J.9
-
103
-
-
33750712806
-
Adeno-associated virus type 2 capsids with externalized VP1/VP2 trafficking domains are generated prior to passage through the cytoplasm and are maintained until uncoating occurs in the nucleus
-
Sonntag F., Bleker S., Leuchs B., Fischer R., Kleinschmidt J.A. Adeno-associated virus type 2 capsids with externalized VP1/VP2 trafficking domains are generated prior to passage through the cytoplasm and are maintained until uncoating occurs in the nucleus. J. Virol. 2006, 80:11040-11054.
-
(2006)
J. Virol.
, vol.80
, pp. 11040-11054
-
-
Sonntag, F.1
Bleker, S.2
Leuchs, B.3
Fischer, R.4
Kleinschmidt, J.A.5
-
104
-
-
81255179983
-
The assembly-activating protein promotes capsid assembly of different adeno-associated virus serotypes
-
Sonntag F., Kother K., Schmidt K., Weghofer M., Raupp C., Nieto K., Kuck A., Gerlach B., Bottcher B., Muller O.J., Lux K., Horer M., Kleinschmidt J.A. The assembly-activating protein promotes capsid assembly of different adeno-associated virus serotypes. J. Virol. 2011, 85:12686-12697.
-
(2011)
J. Virol.
, vol.85
, pp. 12686-12697
-
-
Sonntag, F.1
Kother, K.2
Schmidt, K.3
Weghofer, M.4
Raupp, C.5
Nieto, K.6
Kuck, A.7
Gerlach, B.8
Bottcher, B.9
Muller, O.J.10
Lux, K.11
Horer, M.12
Kleinschmidt, J.A.13
-
105
-
-
83455219474
-
Adeno-associated virus mediated gene therapy for retinal degenerative diseases
-
Stieger K., Cronin T., Bennett J., Rolling F. Adeno-associated virus mediated gene therapy for retinal degenerative diseases. Methods Mol. Biol. 2011, 807:179-218.
-
(2011)
Methods Mol. Biol.
, vol.807
, pp. 179-218
-
-
Stieger, K.1
Cronin, T.2
Bennett, J.3
Rolling, F.4
-
106
-
-
0031906147
-
Membrane-associated heparan sulfate proteoglycan is a receptor for adeno-associated virus type 2 virions
-
Summerford C., Samulski R.J. Membrane-associated heparan sulfate proteoglycan is a receptor for adeno-associated virus type 2 virions. J. Virol. 1998, 72:1438-1445.
-
(1998)
J. Virol.
, vol.72
, pp. 1438-1445
-
-
Summerford, C.1
Samulski, R.J.2
-
107
-
-
0032589751
-
AlphaVbeta5 integrin: a co-receptor for adeno-associated virus type 2 infection
-
Summerford C., Bartlett J.S., Samulski R.J. AlphaVbeta5 integrin: a co-receptor for adeno-associated virus type 2 infection. Nat. Med. 1999, 5:78-82.
-
(1999)
Nat. Med.
, vol.5
, pp. 78-82
-
-
Summerford, C.1
Bartlett, J.S.2
Samulski, R.J.3
-
108
-
-
84895987316
-
AAV8 capsid variable regions at the two-fold symmetry axis contribute to high liver transduction by mediating nuclear entry and capsid uncoating
-
Tenney R.M., Bell C.L., Wilson J.M. AAV8 capsid variable regions at the two-fold symmetry axis contribute to high liver transduction by mediating nuclear entry and capsid uncoating. Virology 2014, 454-455:227-236.
-
(2014)
Virology
, pp. 227-236
-
-
Tenney, R.M.1
Bell, C.L.2
Wilson, J.M.3
-
109
-
-
0031058884
-
Rotation function calculations with GLRF program
-
Tong L., Rossmann M.G. Rotation function calculations with GLRF program. Methods Enzymol. 1997, 276:594-611.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 594-611
-
-
Tong, L.1
Rossmann, M.G.2
-
110
-
-
84895526134
-
Mapping the AAV capsid host antibody response toward the development of second generation gene delivery vectors
-
Tseng Y.S., Agbandje-McKenna M. Mapping the AAV capsid host antibody response toward the development of second generation gene delivery vectors. Front. Immunol. 2014, 5:9.
-
(2014)
Front. Immunol.
, vol.5
, pp. 9
-
-
Tseng, Y.S.1
Agbandje-McKenna, M.2
-
111
-
-
61349202081
-
Crystallographic model quality at a glance
-
Urzhumtseva L., Afonine P., Adams P., Urzhumtsev A. Crystallographic model quality at a glance. Acta Crystallogr. D Biol. Crystallogr. 2009, 65:297-300.
-
(2009)
Acta Crystallogr. D Biol. Crystallogr.
, vol.65
, pp. 297-300
-
-
Urzhumtseva, L.1
Afonine, P.2
Adams, P.3
Urzhumtsev, A.4
-
112
-
-
84876171439
-
Structure and dynamics of adeno-associated virus serotype 1 VP1-unique N-terminal domain and its role in capsid trafficking
-
Venkatakrishnan B., Yarbrough J., Domsic J., Bennett A., Bothner B., Kozyreva O.G., Samulski R.J., Muzyczka N., McKenna R., Agbandje-McKenna M. Structure and dynamics of adeno-associated virus serotype 1 VP1-unique N-terminal domain and its role in capsid trafficking. J. Virol. 2013, 87:4974-4984.
-
(2013)
J. Virol.
, vol.87
, pp. 4974-4984
-
-
Venkatakrishnan, B.1
Yarbrough, J.2
Domsic, J.3
Bennett, A.4
Bothner, B.5
Kozyreva, O.G.6
Samulski, R.J.7
Muzyczka, N.8
McKenna, R.9
Agbandje-McKenna, M.10
-
113
-
-
1842562409
-
Structure of adeno-associated virus serotype 5
-
Walters R.W., Agbandje-McKenna M., Bowman V.D., Moninger T.O., Olson N.H., Seiler M., Chiorini J.A., Baker T.S., Zabner J. Structure of adeno-associated virus serotype 5. J. Virol. 2004, 78:3361-3371.
-
(2004)
J. Virol.
, vol.78
, pp. 3361-3371
-
-
Walters, R.W.1
Agbandje-McKenna, M.2
Bowman, V.D.3
Moninger, T.O.4
Olson, N.H.5
Seiler, M.6
Chiorini, J.A.7
Baker, T.S.8
Zabner, J.9
-
114
-
-
17044394814
-
Sustained correction of disease in naive and AAV2-pretreated hemophilia B dogs: AAV2/8-mediated, liver-directed gene therapy
-
Wang L., Calcedo R., Nichols T.C., Bellinger D.A., Dillow A., Verma I.M., Wilson J.M. Sustained correction of disease in naive and AAV2-pretreated hemophilia B dogs: AAV2/8-mediated, liver-directed gene therapy. Blood 2005, 105:3079-3086.
-
(2005)
Blood
, vol.105
, pp. 3079-3086
-
-
Wang, L.1
Calcedo, R.2
Nichols, T.C.3
Bellinger, D.A.4
Dillow, A.5
Verma, I.M.6
Wilson, J.M.7
-
115
-
-
0033808531
-
Monoclonal antibodies against the adeno-associated virus type 2 (AAV-2) capsid: epitope mapping and identification of capsid domains involved in AAV-2-cell interaction and neutralization of AAV-2 infection
-
Wobus C.E., Hugle-Dorr B., Girod A., Petersen G., Hallek M., Kleinschmidt J.A. Monoclonal antibodies against the adeno-associated virus type 2 (AAV-2) capsid: epitope mapping and identification of capsid domains involved in AAV-2-cell interaction and neutralization of AAV-2 infection. J. Virol. 2000, 74:9281-9293.
-
(2000)
J. Virol.
, vol.74
, pp. 9281-9293
-
-
Wobus, C.E.1
Hugle-Dorr, B.2
Girod, A.3
Petersen, G.4
Hallek, M.5
Kleinschmidt, J.A.6
-
116
-
-
0033851104
-
Mutational analysis of the adeno-associated virus type 2 (AAV2) capsid gene and construction of AAV2 vectors with altered tropism
-
Wu P., Xiao W., Conlon T., Hughes J., Agbandje-McKenna M., Ferkol T., Flotte T., Muzyczka N. Mutational analysis of the adeno-associated virus type 2 (AAV2) capsid gene and construction of AAV2 vectors with altered tropism. J. Virol. 2000, 74:8635-8647.
-
(2000)
J. Virol.
, vol.74
, pp. 8635-8647
-
-
Wu, P.1
Xiao, W.2
Conlon, T.3
Hughes, J.4
Agbandje-McKenna, M.5
Ferkol, T.6
Flotte, T.7
Muzyczka, N.8
-
117
-
-
33750722840
-
Single amino acid changes can influence titer, heparin binding, and tissue tropism in different adeno-associated virus serotypes
-
Wu Z., Asokan A., Grieger J.C., Govindasamy L., Agbandje-McKenna M., Samulski R.J. Single amino acid changes can influence titer, heparin binding, and tissue tropism in different adeno-associated virus serotypes. J. Virol. 2006, 80:11393-11397.
-
(2006)
J. Virol.
, vol.80
, pp. 11393-11397
-
-
Wu, Z.1
Asokan, A.2
Grieger, J.C.3
Govindasamy, L.4
Agbandje-McKenna, M.5
Samulski, R.J.6
-
118
-
-
34248172479
-
Interpretation of electron density with stereographic roadmap projections
-
Xiao C., Rossmann M.G. Interpretation of electron density with stereographic roadmap projections. J. Struct. Biol. 2007, 158:182-187.
-
(2007)
J. Struct. Biol.
, vol.158
, pp. 182-187
-
-
Xiao, C.1
Rossmann, M.G.2
-
119
-
-
0030573015
-
Canine parvovirus capsid structure, analyzed at 2.9 A resolution
-
Xie Q., Chapman M.S. Canine parvovirus capsid structure, analyzed at 2.9 A resolution. J. Mol. Biol. 1996, 264:497-520.
-
(1996)
J. Mol. Biol.
, vol.264
, pp. 497-520
-
-
Xie, Q.1
Chapman, M.S.2
-
120
-
-
80053386167
-
Structure-function analysis of receptor-binding in adeno-associated virus serotype 6 (AAV-6)
-
Xie Q., Lerch T.F., Meyer N.L., Chapman M.S. Structure-function analysis of receptor-binding in adeno-associated virus serotype 6 (AAV-6). Virology 2011, 420:10-19.
-
(2011)
Virology
, vol.420
, pp. 10-19
-
-
Xie, Q.1
Lerch, T.F.2
Meyer, N.L.3
Chapman, M.S.4
-
121
-
-
0036678455
-
The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy
-
Xie Q., Bu W., Bhatia S., Hare J., Somasundaram T., Azzi A., Chapman M.S. The atomic structure of adeno-associated virus (AAV-2), a vector for human gene therapy. Proc. Natl. Acad. Sci. U.S.A. 2002, 99:10405-10410.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 10405-10410
-
-
Xie, Q.1
Bu, W.2
Bhatia, S.3
Hare, J.4
Somasundaram, T.5
Azzi, A.6
Chapman, M.S.7
-
122
-
-
84903760379
-
Global CNS transduction of adult mice by intravenously delivered rAAVrh. 8 and rAAVrh.10 and nonhuman primates by rAAVrh.10
-
Yang B., Li S., Wang H., Guo Y., Gessler D.J., Cao C., Su Q., Kramer J., Zhong L., Ahmed S.S., Zhang H., He R., Desrosiers R.C., Brown R., Xu Z., Gao G. Global CNS transduction of adult mice by intravenously delivered rAAVrh. 8 and rAAVrh.10 and nonhuman primates by rAAVrh.10. Mol. Ther. 2014, 22:1299-1309.
-
(2014)
Mol. Ther.
, vol.22
, pp. 1299-1309
-
-
Yang, B.1
Li, S.2
Wang, H.3
Guo, Y.4
Gessler, D.J.5
Cao, C.6
Su, Q.7
Kramer, J.8
Zhong, L.9
Ahmed, S.S.10
Zhang, H.11
He, R.12
Desrosiers, R.C.13
Brown, R.14
Xu, Z.15
Gao, G.16
-
123
-
-
79961032418
-
Several rAAV vectors efficiently cross the blood-brain barrier and transduce neurons and astrocytes in the neonatal mouse central nervous system
-
Zhang H., Yang B., Mu X., Ahmed S.S., Su Q., He R., Wang H., Mueller C., Sena-Esteves M., Brown R., Xu Z., Gao G. Several rAAV vectors efficiently cross the blood-brain barrier and transduce neurons and astrocytes in the neonatal mouse central nervous system. Mol. Ther. 2011, 19:1440-1448.
-
(2011)
Mol. Ther.
, vol.19
, pp. 1440-1448
-
-
Zhang, H.1
Yang, B.2
Mu, X.3
Ahmed, S.S.4
Su, Q.5
He, R.6
Wang, H.7
Mueller, C.8
Sena-Esteves, M.9
Brown, R.10
Xu, Z.11
Gao, G.12
-
124
-
-
45549090635
-
Next generation of adeno-associated virus 2 vectors: point mutations in tyrosines lead to high-efficiency transduction at lower doses
-
Zhong L., Li B., Mah C.S., Govindasamy L., Agbandje-McKenna M., Cooper M., Herzog R.W., Zolotukhin I., Warrington K.H., Weigel-Van Aken K.A., Hobbs J.A., Zolotukhin S., Muzyczka N., Srivastava A. Next generation of adeno-associated virus 2 vectors: point mutations in tyrosines lead to high-efficiency transduction at lower doses. Proc. Natl. Acad. Sci. U.S.A. 2008, 105:7827-7832.
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 7827-7832
-
-
Zhong, L.1
Li, B.2
Mah, C.S.3
Govindasamy, L.4
Agbandje-McKenna, M.5
Cooper, M.6
Herzog, R.W.7
Zolotukhin, I.8
Warrington, K.H.9
Weigel-Van Aken, K.A.10
Hobbs, J.A.11
Zolotukhin, S.12
Muzyczka, N.13
Srivastava, A.14
|