The family Parvoviridae

Archives of Virology

Volumn 159, Issue 5, 2014, Pages 1239-1247

  Cotmore, Susan F ^a   Agbandje McKenna, Mavis ^b   Chiorini, John A ^c   Mukha, Dmitry V ^d   Pintel, David J ^e   Qiu, Jianming ^f   Soderlund Venermo, Maria ^g   Tattersall, Peter ^a   Tijssen, Peter ^h   Gatherer, Derek ^i,j   Davison, Andrew J ⁱ  

^a YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

^b UNIVERSITY OF FLORIDA COLLEGE OF MEDICINE   (United States)

^c NATIONAL INSTITUTE OF DENTAL AND CRANIOFACIAL RESEARCH   (United States)

^d VAVILOV INSTITUTE OF GENERAL GENETICS   (Russian Federation)

^e University of Missouri   (United States)

^f UNIVERSITY OF KANSAS SCHOOL OF MEDICINE   (United States)

^g UNIVERSITY OF HELSINKI   (Finland)

^h INRS INSTITUT ARMAND FRAPPIER   (Canada)

ⁱ MRC UNIVERSITY OF GLASGOW CENTRE FOR VIRUS RESEARCH   (United Kingdom)

^j LANCASTER UNIVERSITY   (United Kingdom)

more..

Author keywords

[No Author keywords available]

Indexed keywords

ARTHROPODA; DENSOVIRINAE; DENSOVIRUS; DNA VIRUSES; PARVOVIRIDAE; PARVOVIRINAE; PARVOVIRUS; VERTEBRATA;

ARTICLE; CLASSIFICATION; GENETICS; PARVOVIRUS; PHYLOGENY; SPECIES DIFFERENCE; VIRUS GENOME;

GENOME, VIRAL; PARVOVIRIDAE; PHYLOGENY; SPECIES SPECIFICITY;

EID: 84899970268     PISSN: 03048608     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00705-013-1914-1     Document Type: Article

References (16)

1. Belyi VA, Levine AJ, Skalka AM (2010) Sequences from ancestral single-stranded DNA viruses in vertebrate genomes: the parvoviridae and circoviridae are more than 40 to 50 million years old. J Virol 2010(84): 12458-12462.
2. Cotmore SF and Tattersall P. 2013 Parvovirus diversity and DNA damage responses. Cold Spring Harb Perspect Biol. 2013 5(2). doi: 10. 1101/cshperspect. a012989.
3. Cotmore SF, Tattersall P (2005) A rolling-hairpin strategy: basic mechanisms of DNA replication in the parvoviruses. In: Kerr J, Cotmore SF, Bloom ME, Linden RM, Parrish CR (eds) Parvoviruses. Hodder Arnold, London, pp 171-181.
4. Drummond AJ, Ho SYW, Phillips MJ, Rambaut A (2006) Relaxed phylogenetics and dating with confidence. PLoS Biol 4: e88.
5. Drummond AJ, Rambaut A (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
6. Eddy SR (2011) Accelerated profile HMM searches. PLoS Comput Biol 7: e1002195.
7. Ge X, Li Y, Yang X, Zhang H, Zhou P, Zhang Y, Shi Z (2012) Metagenomic analysis of viruses from bat fecal samples reveals many novel viruses in insectivorous bats in China. J Virol 86: 4620-4630.
8. Huang Q, Deng X, Yan Z, Cheng F, Luo Y, Shen W, Lei-Butters DC, Chen AY, Li Y, Tang L, Söderlund-Venermo M, Engelhardt JF, Qiu J (2012) Establishment of a reverse genetics system for studying human bocavirus in human airway epithelia. PLoS Pathog 8: e1002899.
9. Kapoor A, Simmonds P, Lipkin WI (2010) Discovery and characterization of mammalian endogenous parvoviruses. J Virol 84: 12628-12635.
10. Li L, Cotmore SF, Tattersall P (2013) Parvoviral left-end hairpin ears are essential during infection for establishing a functional intranuclear transcription template and for efficient progeny genome encapsidation. J Virol 87: 10501-10514.
11. Needleman SB, Wunsch CD (1970) A general method applicable to the search for similarities in the amino acid sequences of two proteins. J Mol Biol 48: 443-453.
12. Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S (2011) MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony method. Mol Biol Evol 28: 2731-2739.
13. Tattersall P, Bergoin M, Bloom ME, Brown KE, Linden RM, Muzyczka N, Parrish CR, Tijssen P (2005) Family Parvoviridae. In: Fauquet CM, Mayo MA, Maniloff J, Desselberger U, Ball LA (eds) Virus taxonomy-eighth report of the International Committee on Taxonomy of viruses. Elsevier/Academic Press, San Diego, pp 353-369.
14. Tijssen P, Agbandje-McKenna M, Almendral JM, Bergoin M, Flegel TW, Hedman K, Kleinschmidt J, Li Y, Pintel DJ, Tattersall P (2011) The family Parvoviridae. In: King AMQ, Adams MJ, Carstens EB, Lefkowitz EJ (eds) Virus taxonomy-Ninth Report of the International Committee on Taxonomy of Viruses. Elsevier/ Academic Press, London, pp 405-425.
15. van Regenmortel MHV, Mahy BWJ (2004) Emerging issues in virus taxonomy. Emerg Infect Dis 10: 8-13.
16. van Regenmortel MH, Burke DS, Calisher CH, Dietzgen RG, Fauquet CM, Ghabrial SA, Jahrling PB, Johnson KM, Holbrook MR, Horzinek MC, Keil GM, Kuhn JH, Mahy BW, Martelli GP, Pringle C, Rybicki EP, Skern T, Tesh RB, Wahl-Jensen V, Walker PJ, Weaver SC (2010) A proposal to change existing virus species names to non-Latinized binomials. Arch Virol 155: 1909-1919.