-
1
-
-
84865339838
-
Single-CpG-resolution methylome analysis identifies clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas
-
Arai E, Chiku S, Mori T, Gotoh M, Nakagawa T, Fujimoto H, and Kanai Y (2012) Single-CpG-resolution methylome analysis identifies clinicopathologically aggressive CpG island methylator phenotype clear cell renal cell carcinomas. Carcinogenesis 33:1487-1493.
-
(2012)
Carcinogenesis
, vol.33
, pp. 1487-1493
-
-
Arai, E.1
Chiku, S.2
Mori, T.3
Gotoh, M.4
Nakagawa, T.5
Fujimoto, H.6
Kanai, Y.7
-
2
-
-
79960969204
-
Deletion of the mammalian INDY homolog mimics aspects of dietary restriction and protects against adiposity and insulin resistance in mice
-
Birkenfeld AL, Lee HY, Guebre-Egziabher F, Alves TC, Jurczak MJ, Jornayvaz FR, Zhang D, Hsiao JJ, Martin-Montalvo A, and Fischer-Rosinsky A et al. (2011) Deletion of the mammalian INDY homolog mimics aspects of dietary restriction and protects against adiposity and insulin resistance in mice. Cell Metab 14:184-195.
-
(2011)
Cell Metab
, vol.14
, pp. 184-195
-
-
Birkenfeld, A.L.1
Lee, H.Y.2
Guebre-Egziabher, F.3
Alves, T.C.4
Jurczak, M.J.5
Jornayvaz, F.R.6
Zhang, D.7
Hsiao, J.J.8
Martin-Montalvo, A.9
Fischer-Rosinsky, A.10
-
3
-
-
67650082856
-
Elucidating the 'Jekyll and Hyde' nature of PXR: The case for discovering antagonists or allosteric antagonists
-
Biswas A, Mani S, Redinbo MR, Krasowski MD, Li H, and Ekins S (2009) Elucidating the 'Jekyll and Hyde' nature of PXR: the case for discovering antagonists or allosteric antagonists. Pharm Res 26:1807-1815.
-
(2009)
Pharm Res
, vol.26
, pp. 1807-1815
-
-
Biswas, A.1
Mani, S.2
Redinbo, M.R.3
Krasowski, M.D.4
Li, H.5
Ekins, S.6
-
4
-
-
79952735386
-
Acetylation of pregnane X receptor protein determines selective function independent of ligand activation
-
Biswas A, Pasquel D, Tyagi RK, and Mani S (2011) Acetylation of pregnane X receptor protein determines selective function independent of ligand activation.Biochem Biophys Res Commun 406:371-376.
-
(2011)
Biochem Biophys Res Commun
, vol.406
, pp. 371-376
-
-
Biswas, A.1
Pasquel, D.2
Tyagi, R.K.3
Mani, S.4
-
5
-
-
0032516830
-
Characterization of a rat Na1-dicarboxylate cotransporter
-
Chen XZ, Shayakul C, Berger UV, Tian W, and Hediger MA (1998) Characterization of a rat Na1-dicarboxylate cotransporter. J Biol Chem 273:20972-20981.
-
(1998)
J Biol Chem
, vol.273
, pp. 20972-20981
-
-
Chen, X.Z.1
Shayakul, C.2
Berger, U.V.3
Tian, W.4
Hediger, M.A.5
-
6
-
-
78650035002
-
DNA methylation in glioblastoma: Impact on gene expression and clinical outcome
-
Etcheverry A, Aubry M, de Tayrac M, Vauleon E, Boniface R, Guenot F, Saikali S, Hamlat A, Riffaud L, and Menei P et al. (2010) DNA methylation in glioblastoma: impact on gene expression and clinical outcome. BMC Genomics 11:701.
-
(2010)
BMC Genomics
, vol.11
, pp. 701
-
-
Etcheverry, A.1
Aubry, M.2
De Tayrac, M.3
Vauleon, E.4
Boniface, R.5
Guenot, F.6
Saikali, S.7
Hamlat, A.8
Riffaud, L.9
Menei, P.10
-
7
-
-
0036247430
-
Drugs and steatohepatitis
-
Farrell GC (2002) Drugs and steatohepatitis. Semin Liver Dis 22:185-194.
-
(2002)
Semin Liver Dis
, vol.22
, pp. 185-194
-
-
Farrell, G.C.1
-
8
-
-
33845881481
-
Relative activation of human pregnane X receptor versus constitutive androstane receptor defines distinct classes of CYP2B6 and CYP3A4 inducers
-
Faucette SR, Zhang TC, Moore R, Sueyoshi T, Omiecinski CJ, LeCluyse EL, Negishi M, and Wang H (2007) Relative activation of human pregnane X receptor versus constitutive androstane receptor defines distinct classes of CYP2B6 and CYP3A4 inducers. J Pharmacol Exp Ther 320:72-80.
-
(2007)
J Pharmacol Exp Ther
, vol.320
, pp. 72-80
-
-
Faucette, S.R.1
Zhang, T.C.2
Moore, R.3
Sueyoshi, T.4
Omiecinski, C.J.5
LeCluyse, E.L.6
Negishi, M.7
Wang, H.8
-
9
-
-
0035805536
-
Nuclear receptor response elements mediate induction of intestinal MDR1 by rifampin
-
Geick A, Eichelbaum M, and Burk O (2001) Nuclear receptor response elements mediate induction of intestinal MDR1 by rifampin. J Biol Chem 276:14581-14587.
-
(2001)
J Biol Chem
, vol.276
, pp. 14581-14587
-
-
Geick, A.1
Eichelbaum, M.2
Burk, O.3
-
10
-
-
0032702726
-
The orphan human pregnane X receptor mediates the transcriptional activation of CYP3A4 by rifampicin through a distal enhancer module
-
Goodwin B, Hodgson E, and Liddle C (1999) The orphan human pregnane X receptor mediates the transcriptional activation of CYP3A4 by rifampicin through a distal enhancer module. Mol Pharmacol 56:1329-1339.
-
(1999)
Mol Pharmacol
, vol.56
, pp. 1329-1339
-
-
Goodwin, B.1
Hodgson, E.2
Liddle, C.3
-
11
-
-
33846134734
-
Expression and functional features of NaCT, a sodiumcoupled citrate transporter, in human and rat livers and cell lines
-
Gopal E, Miyauchi S, Martin PM, Ananth S, Srinivas SR, Smith SB, Prasad PD, and Ganapathy V (2007) Expression and functional features of NaCT, a sodiumcoupled citrate transporter, in human and rat livers and cell lines. Am J Physiol Gastrointest Liver Physiol 292:G402-G408.
-
(2007)
Am J Physiol Gastrointest Liver Physiol
, vol.292
, pp. G402-G408
-
-
Gopal, E.1
Miyauchi, S.2
Martin, P.M.3
Ananth, S.4
Srinivas, S.R.5
Smith, S.B.6
Prasad, P.D.7
Ganapathy, V.8
-
12
-
-
34548565667
-
Quantitative analysis of chromosome conformation capture assays (3C-qPCR)
-
Hagège H, Klous P, Braem C, Splinter E, Dekker J, Cathala G, de Laat W, and Forné T (2007) Quantitative analysis of chromosome conformation capture assays (3C-qPCR). Nat Protoc 2:1722-1733.
-
(2007)
Nat Protoc
, vol.2
, pp. 1722-1733
-
-
Hagège, H.1
Klous, P.2
Braem, C.3
Splinter, E.4
Dekker, J.5
Cathala, G.6
De Laat, W.7
Forné, T.8
-
13
-
-
0034803066
-
Regulation of cell morphology and cytochrome P450 expression in human hepatocytes by extracellular matrix and cell-cell interactions
-
Hamilton GA, Jolley SL, Gilbert D, Coon DJ, Barros S, and LeCluyse EL (2001) Regulation of cell morphology and cytochrome P450 expression in human hepatocytes by extracellular matrix and cell-cell interactions. Cell Tissue Res 306:85-99.
-
(2001)
Cell Tissue Res
, vol.306
, pp. 85-99
-
-
Hamilton, G.A.1
Jolley, S.L.2
Gilbert, D.3
Coon, D.J.4
Barros, S.5
LeCluyse, E.L.6
-
14
-
-
84877798556
-
PXR ablation alleviates diet-induced and genetic obesity and insulin resistance in mice
-
He J, Gao J, Xu M, Ren S, Stefanovic-Racic M, O'Doherty RM, and Xie W (2013) PXR ablation alleviates diet-induced and genetic obesity and insulin resistance in mice. Diabetes 62:1876-1887.
-
(2013)
Diabetes
, vol.62
, pp. 1876-1887
-
-
He, J.1
Gao, J.2
Xu, M.3
Ren, S.4
Stefanovic-Racic, M.5
O'Doherty, R.M.6
Xie, W.7
-
15
-
-
0031682988
-
The nuclear orphan receptor CAR-retinoid X receptor heterodimer activates the phenobarbital-responsive enhancer module of the CYP2B gene
-
Honkakoski P, Zelko I, Sueyoshi T, and Negishi M (1998) The nuclear orphan receptor CAR-retinoid X receptor heterodimer activates the phenobarbital-responsive enhancer module of the CYP2B gene. Mol Cell Biol 18:5652-5658.
-
(1998)
Mol Cell Biol
, vol.18
, pp. 5652-5658
-
-
Honkakoski, P.1
Zelko, I.2
Sueyoshi, T.3
Negishi, M.4
-
16
-
-
33846230463
-
Inhibition of drug metabolism by blocking the activation of nuclear receptors by ketoconazole
-
Huang H, Wang H, Sinz M, Zoeckler M, Staudinger J, Redinbo MR, Teotico DG, Locker J, Kalpana GV, and Mani S (2007) Inhibition of drug metabolism by blocking the activation of nuclear receptors by ketoconazole. Oncogene 26:258-268.
-
(2007)
Oncogene
, vol.26
, pp. 258-268
-
-
Huang, H.1
Wang, H.2
Sinz, M.3
Zoeckler, M.4
Staudinger, J.5
Redinbo, M.R.6
Teotico, D.G.7
Locker, J.8
Kalpana, G.V.9
Mani, S.10
-
17
-
-
0037108729
-
Functional identity of Drosophila melanogaster Indy as a cation-independent, electroneutral transporter for tricarboxylic acid-cycle intermediates
-
Inoue K, Fei YJ, Huang W, Zhuang L, Chen Z, and Ganapathy V (2002a) Functional identity of Drosophila melanogaster Indy as a cation-independent, electroneutral transporter for tricarboxylic acid-cycle intermediates. Biochem J 367:313-319.
-
(2002)
Biochem J
, vol.367
, pp. 313-319
-
-
Inoue, K.1
Fei, Y.J.2
Huang, W.3
Zhuang, L.4
Chen, Z.5
Ganapathy, V.6
-
18
-
-
1642464014
-
Functional features and genomic organization of mouse NaCT, a sodium-coupled transporter for tricarboxylic acid cycle intermediates
-
Inoue K, Fei YJ, Zhuang L, Gopal E, Miyauchi S, and Ganapathy V (2004) Functional features and genomic organization of mouse NaCT, a sodium-coupled transporter for tricarboxylic acid cycle intermediates. Biochem J 378:949-957.
-
(2004)
Biochem J
, vol.378
, pp. 949-957
-
-
Inoue, K.1
Fei, Y.J.2
Zhuang, L.3
Gopal, E.4
Miyauchi, S.5
Ganapathy, V.6
-
19
-
-
0036434563
-
Human Na1-coupled citrate transporter: Primary structure, genomic organization, and transport function
-
Inoue K, Zhuang L, and Ganapathy V (2002b) Human Na1-coupled citrate transporter: primary structure, genomic organization, and transport function. Biochem Biophys Res Commun 299:465-471.
-
(2002)
Biochem Biophys Res Commun
, vol.299
, pp. 465-471
-
-
Inoue, K.1
Zhuang, L.2
Ganapathy, V.3
-
20
-
-
0037131161
-
Structure, function, and expression pattern of a novel sodium-coupled citrate transporter (NaCT) cloned from mammalian brain
-
Inoue K, Zhuang L, Maddox DM, Smith SB, and Ganapathy V (2002c) Structure, function, and expression pattern of a novel sodium-coupled citrate transporter (NaCT) cloned from mammalian brain. J Biol Chem 277:39469-39476.
-
(2002)
J Biol Chem
, vol.277
, pp. 39469-39476
-
-
Inoue, K.1
Zhuang, L.2
Maddox, D.M.3
Smith, S.B.4
Ganapathy, V.5
-
21
-
-
0042828877
-
Human sodiumcoupled citrate transporter, the orthologue of Drosophila Indy, as a novel target for lithium action
-
Inoue K, Zhuang L, Maddox DM, Smith SB, and Ganapathy V (2003) Human sodiumcoupled citrate transporter, the orthologue of Drosophila Indy, as a novel target for lithium action. Biochem J 374:21-26.
-
(2003)
Biochem J
, vol.374
, pp. 21-26
-
-
Inoue, K.1
Zhuang, L.2
Maddox, D.M.3
Smith, S.B.4
Ganapathy, V.5
-
22
-
-
33645983221
-
LXRS and FXR: The yin and yang of cholesterol and fat metabolism
-
Kalaany NY and Mangelsdorf DJ (2006) LXRS and FXR: the yin and yang of cholesterol and fat metabolism. Annu Rev Physiol 68:159-191.
-
(2006)
Annu Rev Physiol
, vol.68
, pp. 159-191
-
-
Kalaany, N.Y.1
Mangelsdorf, D.J.2
-
23
-
-
39849099238
-
Role of peroxisome proliferatorsactivated receptors in the pathogenesis and treatment of nonalcoholic fatty liver disease
-
Kallwitz ER, McLachlan A, and Cotler SJ (2008) Role of peroxisome proliferatorsactivated receptors in the pathogenesis and treatment of nonalcoholic fatty liver disease. World J Gastroenterol 14:22-28.
-
(2008)
World J Gastroenterol
, vol.14
, pp. 22-28
-
-
Kallwitz, E.R.1
McLachlan, A.2
Cotler, S.J.3
-
24
-
-
33745519687
-
The life-extending gene Indy encodes an exchanger for Krebs-cycle intermediates
-
Knauf F, Mohebbi N, Teichert C, Herold D, Rogina B, Helfand S, Gollasch M, Luft FC, and Aronson PS (2006) The life-extending gene Indy encodes an exchanger for Krebs-cycle intermediates. Biochem J 397:25-29.
-
(2006)
Biochem J
, vol.397
, pp. 25-29
-
-
Knauf, F.1
Mohebbi, N.2
Teichert, C.3
Herold, D.4
Rogina, B.5
Helfand, S.6
Gollasch, M.7
Luft, F.C.8
Aronson, P.S.9
-
25
-
-
42249111748
-
The roles of nuclear receptors CAR and PXR in hepatic energy metabolism
-
Konno Y, Negishi M, and Kodama S (2008) The roles of nuclear receptors CAR and PXR in hepatic energy metabolism. Drug Metab Pharmacokinet 23:8-13.
-
(2008)
Drug Metab Pharmacokinet
, vol.23
, pp. 8-13
-
-
Konno, Y.1
Negishi, M.2
Kodama, S.3
-
26
-
-
80054788704
-
Differential roles of unsaturated and saturated fatty acids on autophagy and apoptosis in hepatocytes
-
Mei S, Ni HM, Manley S, Bockus A, Kassel KM, Luyendyk JP, Copple BL, and Ding WX (2011) Differential roles of unsaturated and saturated fatty acids on autophagy and apoptosis in hepatocytes. J Pharmacol Exp Ther 339:487-498.
-
(2011)
J Pharmacol Exp Ther
, vol.339
, pp. 487-498
-
-
Mei, S.1
Ni, H.M.2
Manley, S.3
Bockus, A.4
Kassel, K.M.5
Luyendyk, J.P.6
Copple, B.L.7
Ding, W.X.8
-
27
-
-
77949916811
-
Enhanced steatosis by nuclear receptor ligands: A study in cultured human hepatocytes and hepatoma cells with a characterized nuclear receptor expression profile
-
Moya M, Gómez-LechónMJ, Castell JV, and Jover R (2010) Enhanced steatosis by nuclear receptor ligands: a study in cultured human hepatocytes and hepatoma cells with a characterized nuclear receptor expression profile. Chem Biol Interact 184:376-387.
-
(2010)
Chem Biol Interact
, vol.184
, pp. 376-387
-
-
Moya, M.1
Gómez-Lechón, M.J.2
Castell, J.V.3
Jover, R.4
-
28
-
-
34248202757
-
Nuclear pregnane X receptor cross-talk with FoxA2 to mediate drug-induced regulation of lipid metabolism in fasting mouse liver
-
Nakamura K, Moore R, Negishi M, and Sueyoshi T (2007) Nuclear pregnane X receptor cross-talk with FoxA2 to mediate drug-induced regulation of lipid metabolism in fasting mouse liver. J Biol Chem 282:9768-9776.
-
(2007)
J Biol Chem
, vol.282
, pp. 9768-9776
-
-
Nakamura, K.1
Moore, R.2
Negishi, M.3
Sueyoshi, T.4
-
29
-
-
0028957041
-
Sequence and functional characterization of a renal sodium/dicarboxylate cotransporter
-
Pajor AM (1995) Sequence and functional characterization of a renal sodium/dicarboxylate cotransporter. J Biol Chem 270:5779-5785.
-
(1995)
J Biol Chem
, vol.270
, pp. 5779-5785
-
-
Pajor, A.M.1
-
30
-
-
84891890141
-
Sodium-coupled dicarboxylate and citrate transporters from the SLC13 family
-
Pajor AM (2014) Sodium-coupled dicarboxylate and citrate transporters from the SLC13 family. Pflugers Arch 466:119-130.
-
(2014)
Pflugers Arch
, vol.466
, pp. 119-130
-
-
Pajor, A.M.1
-
31
-
-
80054959409
-
Revisiting the TCA cycle: Signaling to tumor formation
-
Raimundo N, Baysal BE, and Shadel GS (2011) Revisiting the TCA cycle: signaling to tumor formation. Trends Mol Med 17:641-649.
-
(2011)
Trends Mol Med
, vol.17
, pp. 641-649
-
-
Raimundo, N.1
Baysal, B.E.2
Shadel, G.S.3
-
32
-
-
0026793195
-
Quantitation of adipose conversion and triglycerides by staining intracytoplasmic lipids with Oil red O
-
Ramírez-Zacarías JL, Castro-Muñozledo F, and Kuri-Harcuch W (1992) Quantitation of adipose conversion and triglycerides by staining intracytoplasmic lipids with Oil red O. Histochemistry 97:493-497.
-
(1992)
Histochemistry
, vol.97
, pp. 493-497
-
-
Ramírez-Zacarías, J.L.1
Castro-Muñozledo, F.2
Kuri-Harcuch, W.3
-
34
-
-
84865712588
-
Improving the description of metabolic networks: The TCA cycle as example
-
Stobbe MD, Houten SM, van Kampen AH, Wanders RJ, and Moerland PD (2012) Improving the description of metabolic networks: the TCA cycle as example. FASEB J 26:3625-3636.
-
(2012)
FASEB J
, vol.26
, pp. 3625-3636
-
-
Stobbe, M.D.1
Houten, S.M.2
Van Kampen, A.H.3
Wanders, R.J.4
Moerland, P.D.5
-
35
-
-
78650175257
-
Regulation of drug-metabolizing enzymes by xenobiotic receptors: PXR and CAR
-
Tolson AH and Wang H (2010) Regulation of drug-metabolizing enzymes by xenobiotic receptors: PXR and CAR. Adv Drug Deliv Rev 62:1238-1249.
-
(2010)
Adv Drug Deliv Rev
, vol.62
, pp. 1238-1249
-
-
Tolson, A.H.1
Wang, H.2
-
37
-
-
0037515661
-
A novel distal enhancer module regulated by pregnane X receptor/constitutive androstane receptor is essential for the maximal induction of CYP2B6 gene expression
-
Wang H, Faucette S, Sueyoshi T, Moore R, Ferguson S, Negishi M, and LeCluyse EL (2003) A novel distal enhancer module regulated by pregnane X receptor/constitutive androstane receptor is essential for the maximal induction of CYP2B6 gene expression. J Biol Chem 278:14146-14152.
-
(2003)
J Biol Chem
, vol.278
, pp. 14146-14152
-
-
Wang, H.1
Faucette, S.2
Sueyoshi, T.3
Moore, R.4
Ferguson, S.5
Negishi, M.6
LeCluyse, E.L.7
-
38
-
-
0346099111
-
Role of orphan nuclear receptors in the regulation of drug-metabolising enzymes
-
Wang H and LeCluyse EL (2003) Role of orphan nuclear receptors in the regulation of drug-metabolising enzymes. Clin Pharmacokinet 42:1331-1357.
-
(2003)
Clin Pharmacokinet
, vol.42
, pp. 1331-1357
-
-
Wang, H.1
LeCluyse, E.L.2
-
40
-
-
0034721159
-
Humanized xenobiotic response in mice expressing nuclear receptor SXR
-
Xie W, Barwick JL, Downes M, Blumberg B, Simon CM, Nelson MC, Neuschwander-Tetri BA, Brunt EM, Guzelian PS, and Evans RM (2000a) Humanized xenobiotic response in mice expressing nuclear receptor SXR. Nature 406:435-439.
-
(2000)
Nature
, vol.406
, pp. 435-439
-
-
Xie, W.1
Barwick, J.L.2
Downes, M.3
Blumberg, B.4
Simon, C.M.5
Nelson, M.C.6
Neuschwander-Tetri, B.A.7
Brunt, E.M.8
Guzelian, P.S.9
Evans, R.M.10
-
41
-
-
0033638960
-
Reciprocal activation of xenobiotic response genes by nuclear receptors SXR/PXR and CAR
-
Xie W, Barwick JL, Simon CM, Pierce AM, Safe S, Blumberg B, Guzelian PS, and Evans RM (2000b) Reciprocal activation of xenobiotic response genes by nuclear receptors SXR/PXR and CAR. Genes Dev 14:3014-3023.
-
(2000)
Genes Dev
, vol.14
, pp. 3014-3023
-
-
Xie, W.1
Barwick, J.L.2
Simon, C.M.3
Pierce, A.M.4
Safe, S.5
Blumberg, B.6
Guzelian, P.S.7
Evans, R.M.8
-
42
-
-
33845904129
-
The dietary isothiocyanate sulforaphane is an antagonist of the human steroid and xenobiotic nuclear receptor
-
Zhou C, Poulton EJ, Grün F, Bammler TK, Blumberg B, Thummel KE, and Eaton DL (2007) The dietary isothiocyanate sulforaphane is an antagonist of the human steroid and xenobiotic nuclear receptor. Mol Pharmacol 71:220-229.
-
(2007)
Mol Pharmacol
, vol.71
, pp. 220-229
-
-
Zhou, C.1
Poulton, E.J.2
Grün, F.3
Bammler, T.K.4
Blumberg, B.5
Thummel, K.E.6
Eaton, D.L.7
-
43
-
-
38649096259
-
Hepatic fatty acid transporter Cd36 is a common target of LXR, PXR, and PPARgamma in promoting steatosis
-
Zhou J, Febbraio M, Wada T, Zhai Y, Kuruba R, He J, Lee JH, Khadem S, Ren S, and Li S et al. (2008) Hepatic fatty acid transporter Cd36 is a common target of LXR, PXR, and PPARgamma in promoting steatosis. Gastroenterology 134: 556-567.
-
(2008)
Gastroenterology
, vol.134
, pp. 556-567
-
-
Zhou, J.1
Febbraio, M.2
Wada, T.3
Zhai, Y.4
Kuruba, R.5
He, J.6
Lee, J.H.7
Khadem, S.8
Ren, S.9
Li, S.10
|