-
1
-
-
84891745088
-
Historical landmarks of autophagy research
-
Ohsumi Y (2014) Historical landmarks of autophagy research. Cell Res 24(1):9-23.
-
(2014)
Cell Res
, vol.24
, Issue.1
, pp. 9-23
-
-
Ohsumi, Y.1
-
2
-
-
78751672975
-
Autophagy in immunity and inflammation
-
Levine B, Mizushima N, Virgin HW (2011) Autophagy in immunity and inflammation. Nature 469(7330):323-335.
-
(2011)
Nature
, vol.469
, Issue.7330
, pp. 323-335
-
-
Levine, B.1
Mizushima, N.2
Virgin, H.W.3
-
3
-
-
65549142204
-
A role for ubiquitin in selective autophagy
-
Kirkin V, McEwan DG, Novak I, Dikic I (2009) A role for ubiquitin in selective autophagy. Mol Cell 34(3):259-269.
-
(2009)
Mol Cell
, vol.34
, Issue.3
, pp. 259-269
-
-
Kirkin, V.1
McEwan, D.G.2
Novak, I.3
Dikic, I.4
-
4
-
-
84901815187
-
Cargo recognition and trafficking in selective autophagy
-
Stolz A, Ernst A, Dikic I (2014) Cargo recognition and trafficking in selective autophagy. Nat Cell Biol 16(6):495-501.
-
(2014)
Nat Cell Biol
, vol.16
, Issue.6
, pp. 495-501
-
-
Stolz, A.1
Ernst, A.2
Dikic, I.3
-
5
-
-
84940783815
-
Expanding the ubiquitin code through post-translational modification
-
Herhaus L, Dikic I (2015) Expanding the ubiquitin code through post-translational modification. EMBO Rep 16(9):1071-1083.
-
(2015)
EMBO Rep
, vol.16
, Issue.9
, pp. 1071-1083
-
-
Herhaus, L.1
Dikic, I.2
-
6
-
-
84921369563
-
The roles of PINK1, parkin, and mitochondrial fidelity in Parkinson's disease
-
Pickrell AM, Youle RJ (2015) The roles of PINK1, parkin, and mitochondrial fidelity in Parkinson's disease. Neuron 85(2):257-273.
-
(2015)
Neuron
, vol.85
, Issue.2
, pp. 257-273
-
-
Pickrell, A.M.1
Youle, R.J.2
-
7
-
-
84922434418
-
Quantitative proteomics reveal a feedforward mechanism for mitochondrial PARKIN translocation and ubiquitin chain synthesis
-
Ordureau A, et al. (2014) Quantitative proteomics reveal a feedforward mechanism for mitochondrial PARKIN translocation and ubiquitin chain synthesis. Mol Cell 56(3): 360-375.
-
(2014)
Mol Cell
, vol.56
, Issue.3
, pp. 360-375
-
-
Ordureau, A.1
-
8
-
-
84899539731
-
PINK1 phosphorylates ubiquitin to activate parkin E3 ubiquitin ligase activity
-
Kane LA, et al. (2014) PINK1 phosphorylates ubiquitin to activate Parkin E3 ubiquitin ligase activity. J Cell Biol 205(2):143-153.
-
(2014)
J Cell Biol
, vol.205
, Issue.2
, pp. 143-153
-
-
Kane, L.A.1
-
9
-
-
84899421556
-
Parkin is activated by PINK1-dependent phosphorylation of ubiquitin at ser65
-
Kazlauskaite A, et al. (2014) Parkin is activated by PINK1-dependent phosphorylation of ubiquitin at Ser65. Biochem J 460(1):127-139.
-
(2014)
Biochem J
, vol.460
, Issue.1
, pp. 127-139
-
-
Kazlauskaite, A.1
-
10
-
-
84901751574
-
Ubiquitin is phosphorylated by PINK1 to activate parkin
-
Koyano F, et al. (2014) Ubiquitin is phosphorylated by PINK1 to activate parkin. Nature 510(7503):162-166.
-
(2014)
Nature
, vol.510
, Issue.7503
, pp. 162-166
-
-
Koyano, F.1
-
11
-
-
84922235969
-
Ubiquitin ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis
-
Wauer T, et al. (2015) Ubiquitin Ser65 phosphorylation affects ubiquitin structure, chain assembly and hydrolysis. EMBO J 34(3):307-325.
-
(2015)
EMBO J
, vol.34
, Issue.3
, pp. 307-325
-
-
Wauer, T.1
-
12
-
-
84940792247
-
Phosphorylation of ubiquitin at ser65 affects its polymerization, targets, and proteome-wide turnover
-
Swaney DL, Rodríguez-Mias RA, Villén J (2015) Phosphorylation of ubiquitin at Ser65 affects its polymerization, targets, and proteome-wide turnover. EMBO Rep 16(9): 1131-1144.
-
(2015)
EMBO Rep
, vol.16
, Issue.9
, pp. 1131-1144
-
-
Swaney, D.L.1
Rodríguez-Mias, R.A.2
Villén, J.3
-
13
-
-
84939804206
-
The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy
-
Lazarou M, et al. (2015) The ubiquitin kinase PINK1 recruits autophagy receptors to induce mitophagy. Nature 524(7565):309-314.
-
(2015)
Nature
, vol.524
, Issue.7565
, pp. 309-314
-
-
Lazarou, M.1
-
14
-
-
84938742614
-
Binding to serine 65-phosphorylated ubiquitin primes parkin for optimal PINK1-dependent phosphorylation and activation
-
Kazlauskaite A, et al. (2015) Binding to serine 65-phosphorylated ubiquitin primes Parkin for optimal PINK1-dependent phosphorylation and activation. EMBO Rep 16(8):939-954.
-
(2015)
EMBO Rep
, vol.16
, Issue.8
, pp. 939-954
-
-
Kazlauskaite, A.1
-
15
-
-
79960804104
-
Phosphorylation of the autophagy receptor optineurin restricts salmonella growth
-
Wild P, et al. (2011) Phosphorylation of the autophagy receptor optineurin restricts Salmonella growth. Science 333(6039):228-233.
-
(2011)
Science
, vol.333
, Issue.6039
, pp. 228-233
-
-
Wild, P.1
-
16
-
-
82455172117
-
Serine 403 phosphorylation of p62/SQSTM1 regulates selective autophagic clearance of ubiquitinated proteins
-
Matsumoto G, Wada K, Okuno M, Kurosawa M, Nukina N (2011) Serine 403 phosphorylation of p62/SQSTM1 regulates selective autophagic clearance of ubiquitinated proteins. Mol Cell 44(2):279-289.
-
(2011)
Mol Cell
, vol.44
, Issue.2
, pp. 279-289
-
-
Matsumoto, G.1
Wada, K.2
Okuno, M.3
Kurosawa, M.4
Nukina, N.5
-
17
-
-
84865357562
-
TBK-1 promotes autophagy-mediated antimicrobial defense by controlling autophagosome maturation
-
Pilli M, et al. (2012) TBK-1 promotes autophagy-mediated antimicrobial defense by controlling autophagosome maturation. Immunity 37(2):223-234.
-
(2012)
Immunity
, vol.37
, Issue.2
, pp. 223-234
-
-
Pilli, M.1
-
18
-
-
84876059224
-
Recent insights into the complexity of tankbinding kinase 1 signaling networks: The emerging role of cellular localization in the activation and substrate specificity of TBK1
-
Helgason E, Phung QT, Dueber EC (2013) Recent insights into the complexity of Tankbinding kinase 1 signaling networks: The emerging role of cellular localization in the activation and substrate specificity of TBK1. FEBS Lett 587(8):1230-1237.
-
(2013)
FEBS Lett
, vol.587
, Issue.8
, pp. 1230-1237
-
-
Helgason, E.1
Phung, Q.T.2
Dueber, E.C.3
-
19
-
-
84928695187
-
Haploinsufficiency of TBK1 causes familial ALS and frontotemporal dementia
-
Freischmidt A, et al. (2015) Haploinsufficiency of TBK1 causes familial ALS and frontotemporal dementia. Nat Neurosci 18(5):631-636.
-
(2015)
Nat Neurosci
, vol.18
, Issue.5
, pp. 631-636
-
-
Freischmidt, A.1
-
20
-
-
77952419246
-
Mutations of optineurin in amyotrophic lateral sclerosis
-
Maruyama H, et al. (2010) Mutations of optineurin in amyotrophic lateral sclerosis. Nature 465(7295):223-226.
-
(2010)
Nature
, vol.465
, Issue.7295
, pp. 223-226
-
-
Maruyama, H.1
-
21
-
-
84931007726
-
Whole-genome sequencing reveals important role for TBK1 and OPTN mutations in frontotemporal lobar degeneration without motor neuron disease
-
Pottier C, et al. (2015) Whole-genome sequencing reveals important role for TBK1 and OPTN mutations in frontotemporal lobar degeneration without motor neuron disease. Acta Neuropathol 130(1):77-92.
-
(2015)
Acta Neuropathol
, vol.130
, Issue.1
, pp. 77-92
-
-
Pottier, C.1
-
22
-
-
84945749129
-
Exome sequencing in amyotrophic lateral sclerosis identifies risk genes and pathways
-
Cirulli ET, et al.; FALS Sequencing Consortium (2015) Exome sequencing in amyotrophic lateral sclerosis identifies risk genes and pathways. Science 347(6229): 1436-1441.
-
(2015)
Science
, vol.347
, Issue.6229
, pp. 1436-1441
-
-
Cirulli, E.T.1
-
23
-
-
84951930787
-
The PINK1-PARKIN mitochondrial ubiquitylation pathway drives a program of OPTN/NDP52 recruitment and TBK1 activation to promote mitophagy
-
Heo JM, Ordureau A, Paulo JA, Rinehart J, Harper JW (2015) The PINK1-PARKIN mitochondrial ubiquitylation pathway drives a program of OPTN/NDP52 recruitment and TBK1 activation to promote mitophagy. Mol Cell 60(1):7-20.
-
(2015)
Mol Cell
, vol.60
, Issue.1
, pp. 7-20
-
-
Heo, J.M.1
Ordureau, A.2
Paulo, J.A.3
Rinehart, J.4
Harper, J.W.5
-
24
-
-
44649166613
-
Ubiquitin binding mediates the NF-kappaB inhibitory potential of ABIN proteins
-
Wagner S, et al. (2008) Ubiquitin binding mediates the NF-kappaB inhibitory potential of ABIN proteins. Oncogene 27(26):3739-3745.
-
(2008)
Oncogene
, vol.27
, Issue.26
, pp. 3739-3745
-
-
Wagner, S.1
-
25
-
-
62549155321
-
Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation
-
Rahighi S, et al. (2009) Specific recognition of linear ubiquitin chains by NEMO is important for NF-kappaB activation. Cell 136(6):1098-1109.
-
(2009)
Cell
, vol.136
, Issue.6
, pp. 1098-1109
-
-
Rahighi, S.1
-
26
-
-
80053917869
-
Polyubiquitin binding to optineurin is required for optimal activation of TANK-binding kinase 1 and production of interferon β
-
Gleason CE, Ordureau A, Gourlay R, Arthur JS, Cohen P (2011) Polyubiquitin binding to optineurin is required for optimal activation of TANK-binding kinase 1 and production of interferon β. J Biol Chem 286(41):35663-35674.
-
(2011)
J Biol Chem
, vol.286
, Issue.41
, pp. 35663-35674
-
-
Gleason, C.E.1
Ordureau, A.2
Gourlay, R.3
Arthur, J.S.4
Cohen, P.5
-
27
-
-
84867583216
-
Enhanced phosphoserine insertion during Escherichia coli protein synthesis via partial UAG codon reassignment and release factor 1 deletion
-
Heinemann IU, et al. (2012) Enhanced phosphoserine insertion during Escherichia coli protein synthesis via partial UAG codon reassignment and release factor 1 deletion. FEBS Lett 586(20):3716-3722.
-
(2012)
FEBS Lett
, vol.586
, Issue.20
, pp. 3716-3722
-
-
Heinemann, I.U.1
-
28
-
-
84908065760
-
Optineurin is an autophagy receptor for damaged mitochondria in parkin-mediated mitophagy that is disrupted by an ALS-linked mutation
-
Wong YC, Holzbaur EL (2014) Optineurin is an autophagy receptor for damaged mitochondria in parkin-mediated mitophagy that is disrupted by an ALS-linked mutation. Proc Natl Acad Sci USA 111(42):E4439-E4448.
-
(2014)
Proc Natl Acad Sci USA
, vol.111
, Issue.42
, pp. E4439-E4448
-
-
Wong, Y.C.1
Holzbaur, E.L.2
-
29
-
-
40149097099
-
Enhanced binding of TBK1 by an optineurin mutant that causes a familial form of primary open angle glaucoma
-
Morton S, Hesson L, Peggie M, Cohen P (2008) Enhanced binding of TBK1 by an optineurin mutant that causes a familial form of primary open angle glaucoma. FEBS Lett 582(6):997-1002.
-
(2008)
FEBS Lett
, vol.582
, Issue.6
, pp. 997-1002
-
-
Morton, S.1
Hesson, L.2
Peggie, M.3
Cohen, P.4
-
30
-
-
80052534056
-
Functional dissection of the TBK1 molecular network
-
Goncalves A, et al. (2011) Functional dissection of the TBK1 molecular network. PLoS One 6(9):e23971.
-
(2011)
PLoS One
, vol.6
, Issue.9
, pp. e23971
-
-
Goncalves, A.1
-
31
-
-
84929691103
-
Defining roles of PARKIN and ubiquitin phosphorylation by PINK1 in mitochondrial quality control using a ubiquitin replacement strategy
-
Ordureau A, et al. (2015) Defining roles of PARKIN and ubiquitin phosphorylation by PINK1 in mitochondrial quality control using a ubiquitin replacement strategy. Proc Natl Acad Sci USA 112(21):6637-6642.
-
(2015)
Proc Natl Acad Sci USA
, vol.112
, Issue.21
, pp. 6637-6642
-
-
Ordureau, A.1
-
32
-
-
84903179483
-
The mitochondrial deubiquitinase USP30 opposes parkinmediated mitophagy
-
Bingol B, et al. (2014) The mitochondrial deubiquitinase USP30 opposes parkinmediated mitophagy. Nature 510(7505):370-375.
-
(2014)
Nature
, vol.510
, Issue.7505
, pp. 370-375
-
-
Bingol, B.1
-
33
-
-
0344441899
-
Alterations in the common fragile site gene parkin in ovarian and other cancers
-
Denison SR, et al. (2003) Alterations in the common fragile site gene Parkin in ovarian and other cancers. Oncogene 22(51):8370-8378.
-
(2003)
Oncogene
, vol.22
, Issue.51
, pp. 8370-8378
-
-
Denison, S.R.1
-
34
-
-
84857032953
-
Role of PINK1 binding to the TOM complex and alternate intracellular membranes in recruitment and activation of the E3 ligase parkin
-
Lazarou M, Jin SM, Kane LA, Youle RJ (2012) Role of PINK1 binding to the TOM complex and alternate intracellular membranes in recruitment and activation of the E3 ligase Parkin. Dev Cell 22(2):320-333.
-
(2012)
Dev Cell
, vol.22
, Issue.2
, pp. 320-333
-
-
Lazarou, M.1
Jin, S.M.2
Kane, L.A.3
Youle, R.J.4
-
35
-
-
80855150639
-
SQSTM1 mutations in familial and sporadic amyotrophic lateral sclerosis
-
Fecto F, et al. (2011) SQSTM1 mutations in familial and sporadic amyotrophic lateral sclerosis. Arch Neurol 68(11):1440-1446.
-
(2011)
Arch Neurol
, vol.68
, Issue.11
, pp. 1440-1446
-
-
Fecto, F.1
-
36
-
-
84876085831
-
Ubiquitin-independent function of optineurin in autophagic clearance of protein aggregates
-
Korac J, et al. (2013) Ubiquitin-independent function of optineurin in autophagic clearance of protein aggregates. J Cell Sci 126(Pt 2):580-592.
-
(2013)
J Cell Sci
, vol.126
, pp. 580-592
-
-
Korac, J.1
-
37
-
-
0032079517
-
Massive mitochondrial degeneration in motor neurons triggers the onset of amyotrophic lateral sclerosis in mice expressing a mutant SOD1
-
Kong J, Xu Z (1998) Massive mitochondrial degeneration in motor neurons triggers the onset of amyotrophic lateral sclerosis in mice expressing a mutant SOD1. J Neurosci 18(9):3241-3250.
-
(1998)
J Neurosci
, vol.18
, Issue.9
, pp. 3241-3250
-
-
Kong, J.1
Xu, Z.2
-
38
-
-
45349103038
-
Mps1 kinase activity restrains anaphase during an unperturbed mitosis and targets mad2 to kinetochores
-
Tighe A, Staples O, Taylor S (2008) Mps1 kinase activity restrains anaphase during an unperturbed mitosis and targets Mad2 to kinetochores. J Cell Biol 181(6):893-901.
-
(2008)
J Cell Biol
, vol.181
, Issue.6
, pp. 893-901
-
-
Tighe, A.1
Staples, O.2
Taylor, S.3
-
39
-
-
84887010498
-
Genome engineering using the CRISPR-cas9 system
-
Ran FA, et al. (2013) Genome engineering using the CRISPR-Cas9 system. Nat Protoc 8(11):2281-2308.
-
(2013)
Nat Protoc
, vol.8
, Issue.11
, pp. 2281-2308
-
-
Ran, F.A.1
-
40
-
-
80052769923
-
Mass spectrometry-based proteomics using Q exactive, a high-performance benchtop quadrupole orbitrap mass spectrometer
-
M111.011015
-
Michalski A, et al. (2011) Mass spectrometry-based proteomics using Q Exactive, a high-performance benchtop quadrupole Orbitrap mass spectrometer. Mol Cell Proteomics 10(9):M111.011015.
-
(2011)
Mol Cell Proteomics
, vol.10
, Issue.9
-
-
Michalski, A.1
-
41
-
-
57449099865
-
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
-
Cox J, Mann M (2008) MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat Biotechnol 26(12):1367-1372.
-
(2008)
Nat Biotechnol
, vol.26
, Issue.12
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
42
-
-
79953701087
-
Andromeda: A peptide search engine integrated into the max-quant environment
-
Cox J, et al. (2011) Andromeda: A peptide search engine integrated into the Max-Quant environment. J Proteome Res 10(4):1794-1805.
-
(2011)
J Proteome Res
, vol.10
, Issue.4
, pp. 1794-1805
-
-
Cox, J.1
-
43
-
-
84923229919
-
An efficient genotyping method for genome-modified animals and human cells generated with CRISPR/Cas9 system
-
Zhu X, et al. (2014) An efficient genotyping method for genome-modified animals and human cells generated with CRISPR/Cas9 system. Sci Rep 4:6420.
-
(2014)
Sci Rep
, vol.4
, pp. 6420
-
-
Zhu, X.1
|