메뉴 건너뛰기




Volumn 15, Issue 3, 2016, Pages 810-817

Comprehensive assessment of oxidatively induced modifications of DNA in a rat model of human Wilson's disease

Author keywords

[No Author keywords available]

Indexed keywords

5 HYDROXYMETHYLDEOXYURIDINE; 5 METHYLDEOXYCYTIDINE; DNA; DOUBLE STRANDED DNA; REACTIVE OXYGEN METABOLITE; 5-HYDROXYMETHYL-2'-DEOXYCYTIDINE; COPPER; DEOXYCYTIDINE;

EID: 84962560920     PISSN: 15359476     EISSN: 15359484     Source Type: Journal    
DOI: 10.1074/mcp.M115.052696     Document Type: Article
Times cited : (36)

References (47)
  • 1
    • 0034626735 scopus 로고    scopus 로고
    • Oxidants, oxidative stress and the biology of ageing
    • Finkel, T., and Holbrook, N. J. (2000) Oxidants, oxidative stress and the biology of ageing. Nature 408, 239-247
    • (2000) Nature , vol.408 , pp. 239-247
    • Finkel, T.1    Holbrook, N.J.2
  • 3
    • 34247148895 scopus 로고    scopus 로고
    • The case for 8, 5'-cyclopurine-2'-deoxynucleosides as endogenous DNA lesions that cause neurodegeneration in xeroderma pigmentosum
    • Brooks, P. J. (2007) The case for 8, 5'-cyclopurine-2'-deoxynucleosides as endogenous DNA lesions that cause neurodegeneration in xeroderma pigmentosum. Neuroscience 145, 1407-1417
    • (2007) Neuroscience , vol.145 , pp. 1407-1417
    • Brooks, P.J.1
  • 4
    • 41649091432 scopus 로고    scopus 로고
    • Bulky DNA lesions induced by reactive oxygen species
    • Wang, Y. (2008) Bulky DNA lesions induced by reactive oxygen species. Chem. Res. Toxicol. 21, 276-281
    • (2008) Chem. Res. Toxicol. , vol.21 , pp. 276-281
    • Wang, Y.1
  • 5
    • 0029824077 scopus 로고    scopus 로고
    • Lipid peroxidation as a potential endogenous source for the formation of exocyclic DNA adducts
    • Chung, F. L, Chen, H. J., and Nath, R. G. (1996) Lipid peroxidation as a potential endogenous source for the formation of exocyclic DNA adducts. Carcinogenesis 17, 2105-2111
    • (1996) Carcinogenesis , vol.17 , pp. 2105-2111
    • Chung, F.L.1    Chen, H.J.2    Nath, R.G.3
  • 6
    • 0034011261 scopus 로고    scopus 로고
    • Oxyradicals and DNA damage
    • Marnett, L. J. (2000) Oxyradicals and DNA damage. Carcinogenesis 21, 361-370
    • (2000) Carcinogenesis , vol.21 , pp. 361-370
    • Marnett, L.J.1
  • 7
    • 77953009440 scopus 로고    scopus 로고
    • Simultaneous quantification of three lipid peroxidation-derived etheno adducts in human DNA by stable isotope dilution nanoflow liquid chromatography nanospray ionization tandem mass spectrometry
    • Chen, H. J., Lin, G. J., and Lin, W. P. (2010) Simultaneous quantification of three lipid peroxidation-derived etheno adducts in human DNA by stable isotope dilution nanoflow liquid chromatography nanospray ionization tandem mass spectrometry. Anal. Chem. 82, 4486-4493
    • (2010) Anal. Chem. , vol.82 , pp. 4486-4493
    • Chen, H.J.1    Lin, G.J.2    Lin, W.P.3
  • 8
    • 73249129078 scopus 로고    scopus 로고
    • Simultaneous quantification of 1, N2-propano-2'-deoxyguanosine adducts derived from acrolein and crotonaldehyde in human placenta and leukocytes by isotope dilution nanoflow LC nanospray ionization tandem mass spectrometry
    • Chen, H. J., and Lin, W. P. (2009) Simultaneous quantification of 1, N2-propano-2'-deoxyguanosine adducts derived from acrolein and crotonaldehyde in human placenta and leukocytes by isotope dilution nanoflow LC nanospray ionization tandem mass spectrometry. Anal. Chem. 81, 9812-9818
    • (2009) Anal. Chem. , vol.81 , pp. 9812-9818
    • Chen, H.J.1    Lin, W.P.2
  • 9
    • 84864010124 scopus 로고    scopus 로고
    • The oxidative DNA lesions 8, 5'-cyclopurines accumulate with aging in a tissue-specific manner
    • Wang, J., Clauson, C. L., Robbins, P. D., Niedernhofer, L. J., and Wang, Y. (2012) The oxidative DNA lesions 8, 5'-cyclopurines accumulate with aging in a tissue-specific manner. Aging Cell 11, 714-716
    • (2012) Aging Cell , vol.11 , pp. 714-716
    • Wang, J.1    Clauson, C.L.2    Robbins, P.D.3    Niedernhofer, L.J.4    Wang, Y.5
  • 10
    • 79954589295 scopus 로고    scopus 로고
    • Quantification of oxidative DNA lesions in tissues of Long-Evans Cinnamon rats by capillary high-performance liquid chromatography-tandem mass spectrometry coupled with stable isotope-dilution method
    • Wang, J., Yuan, B., Guerrero, C, Bahde, R., Gupta, S., and Wang, Y. (2011) Quantification of oxidative DNA lesions in tissues of Long-Evans Cinnamon rats by capillary high-performance liquid chromatography-tandem mass spectrometry coupled with stable isotope-dilution method. Anal. Chem. 83, 2201-2209
    • (2011) Anal. Chem. , vol.83 , pp. 2201-2209
    • Wang, J.1    Yuan, B.2    Guerrero, C.3    Bahde, R.4    Gupta, S.5    Wang, Y.6
  • 11
    • 33750217212 scopus 로고    scopus 로고
    • Analysis of crotonaldehyde- and acetaldehyde-derived 1, N2-propanodeoxyguanosine adducts in DNA from human tissues using liquid chromatography electrospray ionization tandem mass spectrometry
    • Zhang, S., Villalta, P. W., Wang, M., and Hecht, S. S. (2006) Analysis of crotonaldehyde- and acetaldehyde-derived 1, N2-propanodeoxyguanosine adducts in DNA from human tissues using liquid chromatography electrospray ionization tandem mass spectrometry. Chem. Res. Toxicol. 19, 1386-1392
    • (2006) Chem. Res. Toxicol. , vol.19 , pp. 1386-1392
    • Zhang, S.1    Villalta, P.W.2    Wang, M.3    Hecht, S.S.4
  • 17
    • 77956189495 scopus 로고    scopus 로고
    • Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification
    • Ito, S., D'Alessio, A. C., Taranova, O. V., Hong, K., Sowers, L. C., and Zhang, Y. (2010) Role of Tet proteins in 5mC to 5hmC conversion, ES-cell self-renewal and inner cell mass specification. Nature 466, 1129-1133
    • (2010) Nature , vol.466 , pp. 1129-1133
    • Ito, S.1    D'Alessio, A.C.2    Taranova, O.V.3    Hong, K.4    Sowers, L.C.5    Zhang, Y.6
  • 18
    • 80052461558 scopus 로고    scopus 로고
    • Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine
    • Ito, S., Shen, L., Dai, Q., Wu, S. C., Collins, L. B., Swenberg, J. A., He, C., and Zhang, Y. (2011) Tet proteins can convert 5-methylcytosine to 5-formylcytosine and 5-carboxylcytosine. Science 333, 1300-1303
    • (2011) Science , vol.333 , pp. 1300-1303
    • Ito, S.1    Shen, L.2    Dai, Q.3    Wu, S.C.4    Collins, L.B.5    Swenberg, J.A.6    He, C.7    Zhang, Y.8
  • 19
    • 66149123748 scopus 로고    scopus 로고
    • The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain
    • Kriaucionis, S., and Heintz, N. (2009) The nuclear DNA base 5-hydroxymethylcytosine is present in Purkinje neurons and the brain. Science 324, 929-930
    • (2009) Science , vol.324 , pp. 929-930
    • Kriaucionis, S.1    Heintz, N.2
  • 21
    • 80053917872 scopus 로고    scopus 로고
    • Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: Potential implications for active demethylation of CpG sites
    • Maiti, A., and Drohat, A. C. (2011) Thymine DNA glycosylase can rapidly excise 5-formylcytosine and 5-carboxylcytosine: potential implications for active demethylation of CpG sites. J. Biol. Chem. 286, 35334-35338
    • (2011) J. Biol. Chem. , vol.286 , pp. 35334-35338
    • Maiti, A.1    Drohat, A.C.2
  • 22
    • 84871563384 scopus 로고    scopus 로고
    • MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system
    • Mellén, M., Ayata, P., Dewell, S., Kriaucionis, S., and Heintz, N. (2012) MeCP2 binds to 5hmC enriched within active genes and accessible chromatin in the nervous system. Cell 151, 1417-1430
    • (2012) Cell , vol.151 , pp. 1417-1430
    • Mellén, M.1    Ayata, P.2    Dewell, S.3    Kriaucionis, S.4    Heintz, N.5
  • 23
    • 84455167621 scopus 로고    scopus 로고
    • Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells
    • Yildirim, O., Li, R., Hung, J. H., Chen, P. B., Dong, X., Ee, L. S., Weng, Z., Rando, O. J., and Fazzio, T. G. (2011) Mbd3/NURD complex regulates expression of 5-hydroxymethylcytosine marked genes in embryonic stem cells. Cell 147, 1498-1510
    • (2011) Cell , vol.147 , pp. 1498-1510
    • Yildirim, O.1    Li, R.2    Hung, J.H.3    Chen, P.B.4    Dong, X.5    Ee, L.S.6    Weng, Z.7    Rando, O.J.8    Fazzio, T.G.9
  • 27
    • 46249112793 scopus 로고    scopus 로고
    • Diagnosis and treatment of Wilson disease: An update
    • Roberts, E. A., and Schilsky, M. L. (2008) Diagnosis and treatment of Wilson disease: An update. Hepatology 47, 2089-2111
    • (2008) Hepatology , vol.47 , pp. 2089-2111
    • Roberts, E.A.1    Schilsky, M.L.2
  • 28
    • 0025892297 scopus 로고
    • Spontaneous hepatic copper accumulation in Long-Evans Cinnamon rats with hereditary hepatitis. A model of Wilson's disease
    • Li, Y., Togashi, Y., Sato, S., Emoto, T., Kang, J. H., Takeichi, N., Kobayashi, H., Kojima, Y., Une, Y., and Uchino, J. (1991) Spontaneous hepatic copper accumulation in Long-Evans Cinnamon rats with hereditary hepatitis. A model of Wilson's disease. J. Clin. Invest. 87, 1858-1861
    • (1991) J. Clin. Invest. , vol.87 , pp. 1858-1861
    • Li, Y.1    Togashi, Y.2    Sato, S.3    Emoto, T.4    Kang, J.H.5    Takeichi, N.6    Kobayashi, H.7    Kojima, Y.8    Une, Y.9    Uchino, J.10
  • 29
    • 22844450330 scopus 로고    scopus 로고
    • Apoptosis and age-dependant induction of nuclear and mitochondrial etheno-DNA adducts in Long-Evans Cinnamon (LEC) rats: Enhanced DNA damage by dietary curcumin upon copper accumulation
    • Nair, J., Strand, S., Frank, N., Knauft, J., Wesch, H., Galle, P. R., and Bartsch, H. (2005) Apoptosis and age-dependant induction of nuclear and mitochondrial etheno-DNA adducts in Long-Evans Cinnamon (LEC) rats: enhanced DNA damage by dietary curcumin upon copper accumulation. Carcinogenesis 26, 1307-1315
    • (2005) Carcinogenesis , vol.26 , pp. 1307-1315
    • Nair, J.1    Strand, S.2    Frank, N.3    Knauft, J.4    Wesch, H.5    Galle, P.R.6    Bartsch, H.7
  • 30
    • 34547927642 scopus 로고    scopus 로고
    • Quantification of oxidative single-base and intrastrand cross-link lesions in unmethylated and CpG-methylated DNA induced by Fenton-type reagents
    • Cao, H., and Wang, Y. (2007) Quantification of oxidative single-base and intrastrand cross-link lesions in unmethylated and CpG-methylated DNA induced by Fenton-type reagents. Nucleic Acids Res. 35, 4833-4844
    • (2007) Nucleic Acids Res. , vol.35 , pp. 4833-4844
    • Cao, H.1    Wang, Y.2
  • 31
    • 77951235773 scopus 로고    scopus 로고
    • Nickel ions inhibit histone demethylase JMJD1A and DNA repair enzyme ABH2 by replacing the ferrous iron in the catalytic centers
    • Chen, H., Giri, N. C., Zhang, R., Yamane, K., Zhang, Y., Maroney, M., and Costa, M. (2010) Nickel ions inhibit histone demethylase JMJD1A and DNA repair enzyme ABH2 by replacing the ferrous iron in the catalytic centers. J. Biol. Chem. 285, 7374-7383
    • (2010) J. Biol. Chem. , vol.285 , pp. 7374-7383
    • Chen, H.1    Giri, N.C.2    Zhang, R.3    Yamane, K.4    Zhang, Y.5    Maroney, M.6    Costa, M.7
  • 32
    • 84863685794 scopus 로고    scopus 로고
    • Carcinogenic metals and the epigenome: Understanding the effect of nickel, arsenic, and chromium
    • Chervona, Y., Arita, A., and Costa, M. (2012) Carcinogenic metals and the epigenome: understanding the effect of nickel, arsenic, and chromium. Metallomics 4, 619-627
    • (2012) Metallomics , vol.4 , pp. 619-627
    • Chervona, Y.1    Arita, A.2    Costa, M.3
  • 33
    • 84864955222 scopus 로고    scopus 로고
    • The control of histone methylation and gene expression by oxidative stress, hypoxia, and metals
    • Chervona, Y., and Costa, M. (2012) The control of histone methylation and gene expression by oxidative stress, hypoxia, and metals. Free Radic. Biol. Med. 53, 1041-1047
    • (2012) Free Radic. Biol. Med. , vol.53 , pp. 1041-1047
    • Chervona, Y.1    Costa, M.2
  • 34
    • 59449085507 scopus 로고    scopus 로고
    • Iron- and 2-oxoglutarate-dependent Dioxygenases: An emerging group of molecular targets for nickel toxicity and carcinogenicity
    • Chen, H., and Costa, M. (2009) Iron- and 2-oxoglutarate-dependent Dioxygenases: an emerging group of molecular targets for nickel toxicity and carcinogenicity. Biometals 22, 191-196
    • (2009) Biometals , vol.22 , pp. 191-196
    • Chen, H.1    Costa, M.2
  • 35
    • 0033372038 scopus 로고    scopus 로고
    • Detection and quantification of 1, N6-ethenoadenine in human placental DNA by mass spectrometry
    • Chen, H. J., Chiang, L. C, Tseng, M. C, Zhang, L. L, Ni, J., and Chung, F. L. (1999) Detection and quantification of 1, N6-ethenoadenine in human placental DNA by mass spectrometry. Chem. Res. Toxicol. 12, 1119-1126
    • (1999) Chem. Res. Toxicol. , vol.12 , pp. 1119-1126
    • Chen, H.J.1    Chiang, L.C.2    Tseng, M.C.3    Zhang, L.L.4    Ni, J.5    Chung, F.L.6
  • 36
    • 77955404467 scopus 로고    scopus 로고
    • Ultrasensitive simultaneous quantification of 1, N2-etheno-2'-deoxyguanosine and 1, N2-propano-2'-deoxyguanosine in DNA by an online liquid chromatography-electrospray tandem mass spectrometry assay
    • Garcia, C. C, Freitas, F. P., Di Mascio, P., and Medeiros, M. H. (2010) Ultrasensitive simultaneous quantification of 1, N2-etheno-2'-deoxyguanosine and 1, N2-propano-2'-deoxyguanosine in DNA by an online liquid chromatography-electrospray tandem mass spectrometry assay. Chem. Res. Toxicol. 23, 1245-1255
    • (2010) Chem. Res. Toxicol. , vol.23 , pp. 1245-1255
    • Garcia, C.C.1    Freitas, F.P.2    Di Mascio, P.3    Medeiros, M.H.4
  • 39
    • 0037133531 scopus 로고    scopus 로고
    • Mass spectrometric assays for the tandem lesion 8, 5'-cyclo-2'-deoxyguanosine in mammalian DNA
    • Jaruga, P., Birincioglu, M., Rodriguez, H., and Dizdaroglu, M. (2002) Mass spectrometric assays for the tandem lesion 8, 5'-cyclo-2'-deoxyguanosine in mammalian DNA. Biochemistry 41, 3703-3711
    • (2002) Biochemistry , vol.41 , pp. 3703-3711
    • Jaruga, P.1    Birincioglu, M.2    Rodriguez, H.3    Dizdaroglu, M.4
  • 40
    • 19544380398 scopus 로고    scopus 로고
    • Absence of nigrostriatal degeneration in LEC rats up to 20 weeks of age
    • Ahn, T. B., Cho, S. S., Kim, D. W., and Jeon, B. S. (2005) Absence of nigrostriatal degeneration in LEC rats up to 20 weeks of age. Neurol. Res. 27, 409-411
    • (2005) Neurol. Res. , vol.27 , pp. 409-411
    • Ahn, T.B.1    Cho, S.S.2    Kim, D.W.3    Jeon, B.S.4
  • 41
    • 84886860116 scopus 로고    scopus 로고
    • TET enzymes, TDG and the dynamics of DNA demethylation
    • Kohli, R. M., and Zhang, Y. (2013) TET enzymes, TDG and the dynamics of DNA demethylation. Nature 502, 472-479
    • (2013) Nature , vol.502 , pp. 472-479
    • Kohli, R.M.1    Zhang, Y.2
  • 42
    • 0004616853 scopus 로고
    • The stability of transition-metal complexes
    • Irving, H., and Williams, R. J. P. (1953) The stability of transition-metal complexes. J. Chem. Soc, 3192-3210
    • (1953) J. Chem. Soc , pp. 3192-3210
    • Irving, H.1    Williams, R.J.P.2
  • 43
    • 34250185700 scopus 로고    scopus 로고
    • Replacement of non-heme Fe (II) with Cu (II) in the a-ketoglutarate dependent DNA repair enzyme AlkB: Spectroscopic characterization of the active site
    • Bleijlevens, B., Shivarattan, T., Sedgwick, B., Rigby, S. E., and Matthews, S. J. (2007) Replacement of non-heme Fe (II) with Cu (II) in the a-ketoglutarate dependent DNA repair enzyme AlkB: spectroscopic characterization of the active site. J. Inorg. Biochem. 101, 1043-1048
    • (2007) J. Inorg. Biochem. , vol.101 , pp. 1043-1048
    • Bleijlevens, B.1    Shivarattan, T.2    Sedgwick, B.3    Rigby, S.E.4    Matthews, S.J.5
  • 44
    • 84925762489 scopus 로고    scopus 로고
    • TET family proteins: Oxidation activity, interacting molecules, and functions in diseases
    • Lu, X., Zhao, B. S., and He, C. (2015) TET family proteins: Oxidation activity, interacting molecules, and functions in diseases. Chem. Rev. 115, 2225-2239
    • (2015) Chem. Rev. , vol.115 , pp. 2225-2239
    • Lu, X.1    Zhao, B.S.2    He, C.3
  • 45
    • 4744344066 scopus 로고    scopus 로고
    • Epigenetics and cancer
    • Lund, A. H., and van Lohuizen, M. (2004) Epigenetics and cancer. Genes Dev. 18, 2315-2335
    • (2004) Genes Dev. , vol.18 , pp. 2315-2335
    • Lund, A.H.1    Van Lohuizen, M.2
  • 47
    • 33846509384 scopus 로고    scopus 로고
    • Alleviation of 1, N6-ethanoadenine genotoxicity by the Escherichia coli adaptive response protein AlkB
    • Frick, L. E., Delaney, J. C, Wong, C, Drennan, C. L., and Essigmann, J. M. (2007) Alleviation of 1, N6-ethanoadenine genotoxicity by the Escherichia coli adaptive response protein AlkB. Proc. Natl. Acad. Sci. U. S. A 104, 755-760
    • (2007) Proc. Natl. Acad. Sci. U. S. A , vol.104 , pp. 755-760
    • Frick, L.E.1    Delaney, J.C.2    Wong, C.3    Drennan, C.L.4    Essigmann, J.M.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.