SCOPUS 정보 검색 플랫폼

ChemBioChem

Volumn 17, Issue 5, 2016, Pages 403-406

Identification of Sequence Specificity of 5-Methylcytosine Oxidation by Tet1 Protein with High-Throughput Sequencing

(3) Kizaki, Seiichiro a Chandran, Anandhakumar a Sugiyama, Hiroshi a,b

a KYOTO UNIVERSITY (Japan)

b KYOTO UNIVERSITY (Japan)

Author keywords

5 hydroxymethylcytosine; 5 methylcytosine; DNA recognition; high throughput sequencing; sequence determination; Tet

Indexed keywords

5 METHYLCYTOSINE; PEPTIDES AND PROTEINS; TEN ELEVEN TRANSLOCATION PROTEIN; UNCLASSIFIED DRUG; MIXED FUNCTION OXIDASE; ONCOPROTEIN; TET1 PROTEIN, HUMAN;

ARTICLE; CONTROLLED STUDY; DNA FLANKING REGION; DNA SEQUENCE; HIGH THROUGHPUT SEQUENCING; METHYLATION; OXIDATION; PRIORITY JOURNAL; CHEMISTRY; HIGH THROUGHPUT SCREENING; OXIDATION REDUCTION REACTION;

5-METHYLCYTOSINE; HIGH-THROUGHPUT SCREENING ASSAYS; MIXED FUNCTION OXYGENASES; OXIDATION-REDUCTION; PROTO-ONCOGENE PROTEINS;

EID: 84959279803 PISSN: 14394227 EISSN: 14397633 Source Type: Journal
DOI: 10.1002/cbic.201500646 Document Type: Article

Times cited : (4)

References (36)

1
- 66149146320
- M. Tahiliani, K. P. Koh, Y. Shen, W. A. Pastor, H. Bandukwala, Y. Brudno, S. Agarwal, L. M. Iyer, D. R. Liu, L. Aravind, A. Rao, Science 2009, 324, 930-935.
- (2009) Science , vol.324 , pp. 930-935
- Tahiliani, M.¹ Koh, K.P.² Shen, Y.³ Pastor, W.A.⁴ Bandukwala, H.⁵ Brudno, Y.⁶ Agarwal, S.⁷ Iyer, L.M.⁸ Liu, D.R.⁹ Aravind, L.¹⁰ Rao, A.¹¹

2
- 80052461558
- S. Ito, L. Shen, Q. Dai, S. C. Wu, L. B. Collins, J. A. Swenberg, C. He, Y. Zhang, Science 2011, 333, 1300-1303.
- (2011) Science , vol.333 , pp. 1300-1303
- Ito, S.¹ Shen, L.² Dai, Q.³ Wu, S.C.⁴ Collins, L.B.⁵ Swenberg, J.A.⁶ He, C.⁷ Zhang, Y.⁸

3
- 80052495940
- Y.-F. He, B.-Z. Li, Z. Li, P. Liu, Y. Wang, Q. Tang, J. Ding, Y. Jia, Z. Chen, L. Li, Y. Sun, X. Li, Q. Dai, C.-X. Song, K. Zhang, C. He, G.-L. Xu, Science 2011, 333, 1303-1307.
- (2011) Science , vol.333 , pp. 1303-1307
- He, Y.-F.¹ Li, B.-Z.² Li, Z.³ Liu, P.⁴ Wang, Y.⁵ Tang, Q.⁶ Ding, J.⁷ Jia, Y.⁸ Chen, Z.⁹ Li, L.¹⁰ Sun, Y.¹¹ Li, X.¹² Dai, Q.¹³ Song, C.-X.¹⁴ Zhang, K.¹⁵ He, C.¹⁶ Xu, G.-L.¹⁷

4
- 84861990517
- M. Yu, G. C. Hon, K. E. Szulwach, C.-X. Song, L. Zhang, A. Kim, X. Li, Q. Dai, Y. Shen, B. Park, J. H. Min, P. Jin, B. Ren, C. He, Cell 2012, 149, 1368-80.
- (2012) Cell , vol.149 , pp. 1368-1380
- Yu, M.¹ Hon, G.C.² Szulwach, K.E.³ Song, C.-X.⁴ Zhang, L.⁵ Kim, A.⁶ Li, X.⁷ Dai, Q.⁸ Shen, Y.⁹ Park, B.¹⁰ Min, J.H.¹¹ Jin, P.¹² Ren, B.¹³ He, C.¹⁴

5
- 84870620786
- M. Yu, G. C. Hon, K. E. Szulwach, C.-X. Song, P. Jin, B. Ren, C. He, Nat. Protoc. 2012, 7, 2159-2170.
- (2012) Nat. Protoc. , vol.7 , pp. 2159-2170
- Yu, M.¹ Hon, G.C.² Szulwach, K.E.³ Song, C.-X.⁴ Jin, P.⁵ Ren, B.⁶ He, C.⁷

6
- 84874607005
- L. Zhang, K. E. Szulwach, G. C. Hon, C.-X. Song, B. Park, M. Yu, X. Lu, Q. Dai, X. Wang, C. R. Street, H. Tan, J.-H. Min, B. Ren, P. Jin, C. He, Nat. Commun. 2013, 4, 1517.
- (2013) Nat. Commun. , vol.4 , pp. 1517
- Zhang, L.¹ Szulwach, K.E.² Hon, G.C.³ Song, C.-X.⁴ Park, B.⁵ Yu, M.⁶ Lu, X.⁷ Dai, Q.⁸ Wang, X.⁹ Street, C.R.¹⁰ Tan, H.¹¹ Min, J.-H.¹² Ren, B.¹³ Jin, P.¹⁴ He, C.¹⁵

7
- 84861221693
- M. J. Booth, M. R. Branco, G. Ficz, D. Oxley, F. Krueger, W. Reik, S. Balasubramanian, Science 2012, 336, 934-937.
- (2012) Science , vol.336 , pp. 934-937
- Booth, M.J.¹ Branco, M.R.² Ficz, G.³ Oxley, D.⁴ Krueger, F.⁵ Reik, W.⁶ Balasubramanian, S.⁷

8
- 84885012678
- M. J. Booth, T. W. B. Ost, D. Beraldi, N. M. Bell, M. R. Branco, W. Reik, S. Balasubramanian, Nat. Protoc. 2013, 8, 1841-1851.
- (2013) Nat. Protoc. , vol.8 , pp. 1841-1851
- Booth, M.J.¹ Ost, T.W.B.² Beraldi, D.³ Bell, N.M.⁴ Branco, M.R.⁵ Reik, W.⁶ Balasubramanian, S.⁷

9
- 84867526316
- P. Schüler, A. K. Miller, Angew. Chem. Int. Ed. 2012, 51, 10704-10707;
- (2012) Angew. Chem. Int. Ed. , vol.51 , pp. 10704-10707
- Schüler, P.¹ Miller, A.K.²

10
- 85018220605
- Angew. Chem. 2012, 124, 10862-10865.
- (2012) Angew. Chem. , vol.124 , pp. 10862-10865

11
- 84876907152
- C.-X. Song, K. E. Szulwach, Q. Dai, Y. Fu, S.-Q. Mao, L. Lin, C. Street, Y. Li, M. Poidevin, H. Wu, J. Gao, P. Liu, L. Li, G.-L. Xu, P. Jin, C. He, Cell 2013, 153, 678-691.
- (2013) Cell , vol.153 , pp. 678-691
- Song, C.-X.¹ Szulwach, K.E.² Dai, Q.³ Fu, Y.⁴ Mao, S.-Q.⁵ Lin, L.⁶ Street, C.⁷ Li, Y.⁸ Poidevin, M.⁹ Wu, H.¹⁰ Gao, J.¹¹ Liu, P.¹² Li, L.¹³ Xu, G.-L.¹⁴ Jin, P.¹⁵ He, C.¹⁶

12
- 84879547408
- X. Lu, C.-X. Song, K. Szulwach, Z. Wang, P. Weidenbacher, P. Jin, C. He, J. Am. Chem. Soc. 2013, 135, 9315-9317.
- (2013) J. Am. Chem. Soc. , vol.135 , pp. 9315-9317
- Lu, X.¹ Song, C.-X.² Szulwach, K.³ Wang, Z.⁴ Weidenbacher, P.⁵ Jin, P.⁶ He, C.⁷

13
- 66149123748
- S. Kriaucionis, N. Heintz, Science 2009, 324, 929-930.
- (2009) Science , vol.324 , pp. 929-930
- Kriaucionis, S.¹ Heintz, N.²

14
- 77954842819
- M. Münzel, D. Globisch, T. Brückl, M. Wagner, V. Welzmiller, S. Michalakis, M. Müller, M. Biel, T. Carell, Angew. Chem. Int. Ed. 2010, 49, 5375-5377;
- (2010) Angew. Chem. Int. Ed. , vol.49 , pp. 5375-5377
- Münzel, M.¹ Globisch, D.² Brückl, T.³ Wagner, M.⁴ Welzmiller, V.⁵ Michalakis, S.⁶ Müller, M.⁷ Biel, M.⁸ Carell, T.⁹

15
- 79951863608
- Angew. Chem. 2010, 122, 5503-5505.
- (2010) Angew. Chem. , vol.122 , pp. 5503-5505

16
- 79960626636
- T. Pfaffeneder, B. Hackner, M. Truß, M. Münzel, M. Müller, C. A. Deiml, C. Hagemeier, T. Carell, Angew. Chem. Int. Ed. 2011, 50, 7008-7012;
- (2011) Angew. Chem. Int. Ed. , vol.50 , pp. 7008-7012
- Pfaffeneder, T.¹ Hackner, B.² Truß, M.³ Münzel, M.⁴ Müller, M.⁵ Deiml, C.A.⁶ Hagemeier, C.⁷ Carell, T.⁸

17
- 82455214223
- Angew. Chem. 2011, 123, 7146-7150.
- (2011) Angew. Chem. , vol.123 , pp. 7146-7150

18
- 78650826181
- D. Globisch, M. Münzel, M. Müller, S. Michalakis, M. Wagner, S. Koch, T. Brückl, M. Biel, T. Carell, PLoS One 2010, 5, e15367.
- (2010) PLoS One , vol.5
- Globisch, D.¹ Münzel, M.² Müller, M.³ Michalakis, S.⁴ Wagner, M.⁵ Koch, S.⁶ Brückl, T.⁷ Biel, M.⁸ Carell, T.⁹

19
- 79959987448
- M. Münzel, D. Globisch, T. Carell, Angew. Chem. Int. Ed. 2011, 50, 6460-6468;
- (2011) Angew. Chem. Int. Ed. , vol.50 , pp. 6460-6468
- Münzel, M.¹ Globisch, D.² Carell, T.³

20
- 82455212017
- Angew. Chem. 2011, 123, 6588-6596.
- (2011) Angew. Chem. , vol.123 , pp. 6588-6596

21
- 84872770694
- J. A. Hackett, R. Sengupta, J. J. Zylicz, K. Murakami, C. Lee, T. A. Down, M. A. Surani, Science 2013, 339, 448-452.
- (2013) Science , vol.339 , pp. 448-452
- Hackett, J.A.¹ Sengupta, R.² Zylicz, J.J.³ Murakami, K.⁴ Lee, C.⁵ Down, T.A.⁶ Surani, M.A.⁷

22
- 79955538247
- J. U. Guo, Y. Su, C. Zhong, G.-l. Ming, H. Song, Cell 2011, 145, 423-34.
- (2011) Cell , vol.145 , pp. 423-434
- Guo, J.U.¹ Su, Y.² Zhong, C.³ Ming, G.-L.⁴ Song, H.⁵

23
- 84862551364
- T. Nakamura, Y.-J. Liu, H. Nakashima, H. Umehara, K. Inoue, S. Matoba, M. Tachibana, A. Ogura, Y. Shinkai, T. Nakano, Nature 2012, 486, 415-419.
- (2012) Nature , vol.486 , pp. 415-419
- Nakamura, T.¹ Liu, Y.-J.² Nakashima, H.³ Umehara, H.⁴ Inoue, K.⁵ Matoba, S.⁶ Tachibana, M.⁷ Ogura, A.⁸ Shinkai, Y.⁹ Nakano, T.¹⁰

24
- 79956292024
- H. Wu, A. C. D'Alessio, S. Ito, K. Xia, Z. Wang, K. Cui, K. Zhao, Y. E. Sun, Y. Zhang, Nature 2011, 473, 389-393.
- (2011) Nature , vol.473 , pp. 389-393
- Wu, H.¹ D'Alessio, A.C.² Ito, S.³ Xia, K.⁴ Wang, Z.⁵ Cui, K.⁶ Zhao, K.⁷ Sun, Y.E.⁸ Zhang, Y.⁹

25
- 84867801948
- J. L. Meier, A. S. Yu, I. Korf, D. J. Segal, P. B. Dervan, J. Am. Chem. Soc. 2012, 134, 17814-17822.
- (2012) J. Am. Chem. Soc. , vol.134 , pp. 17814-17822
- Meier, J.L.¹ Yu, A.S.² Korf, I.³ Segal, D.J.⁴ Dervan, P.B.⁵

26
- 84919767927
- C. Anandhakumar, S. Kizaki, T. Bando, G. N. Pandian, H. Sugiyama, ChemBioChem 2015, 16, 20-38.
- (2015) ChemBioChem , vol.16 , pp. 20-38
- Anandhakumar, C.¹ Kizaki, S.² Bando, T.³ Pandian, G.N.⁴ Sugiyama, H.⁵

27
- 84889030206
- S. Kizaki, H. Sugiyama, Org. Biomol. Chem. 2014, 12, 104-107.
- (2014) Org. Biomol. Chem. , vol.12 , pp. 104-107
- Kizaki, S.¹ Sugiyama, H.²

28
- 75649122221
- A. Zykovich, I. Korf, D. J. Segal, Nucleic Acids Res. 2009, 37, e151.
- (2009) Nucleic Acids Res. , vol.37 , pp. e151
- Zykovich, A.¹ Korf, I.² Segal, D.J.³

29
- 67849122320
- T. L. Bailey, M. Boden, F. A. Buske, M. Frith, C. E. Grant, L. Clementi, J. Ren, W. W. Li, W. S. Noble, Nucleic Acids Res. 2009, 37, W202-W208.
- (2009) Nucleic Acids Res. , vol.37 , pp. W202-W208
- Bailey, T.L.¹ Boden, M.² Buske, F.A.³ Frith, M.⁴ Grant, C.E.⁵ Clementi, L.⁶ Ren, J.⁷ Li, W.W.⁸ Noble, W.S.⁹

30
- 2142738304
- G. E. Crooks, G. Hon, J.-M. Chandonia, S. E. Brenner, Genome Res. 2004, 14, 1188-1190.
- (2004) Genome Res. , vol.14 , pp. 1188-1190
- Crooks, G.E.¹ Hon, G.² Chandonia, J.-M.³ Brenner, S.E.⁴

31
- 84887419524
- P.-F. Cartron, A. Nadaradjane, F. LePape, L. Lalier, B. Gardie, F. M. Vallette, Genes Cancer 2013, 4, 235-241.
- (2013) Genes Cancer , vol.4 , pp. 235-241
- Cartron, P.-F.¹ Nadaradjane, A.² LePape, F.³ Lalier, L.⁴ Gardie, B.⁵ Vallette, F.M.⁶

32
- 84880530231
- F.-T. Shi, H. Kim, W. Lu, Q. He, D. Liu, M. A. Goodell, M. Wan, Z. Songyang, J. Biol. Chem. 2013, 288, 20776-20784.
- (2013) J. Biol. Chem. , vol.288 , pp. 20776-20784
- Shi, F.-T.¹ Kim, H.² Lu, W.³ He, Q.⁴ Liu, D.⁵ Goodell, M.A.⁶ Wan, M.⁷ Songyang, Z.⁸

33
- 84856453032
- C.-X. Song, T. A. Clark, X.-Y. Lu, A. Kislyuk, Q. Dai, S. W. Turner, C. He, J. Korlach, Nat. Methods 2012, 9, 75-77.
- (2012) Nat. Methods , vol.9 , pp. 75-77
- Song, C.-X.¹ Clark, T.A.² Lu, X.-Y.³ Kislyuk, A.⁴ Dai, Q.⁵ Turner, S.W.⁶ He, C.⁷ Korlach, J.⁸

34
- 84897712536
- J. S. Kang, J. L. Meier, P. B. Dervan, J. Am. Chem. Soc. 2014, 136, 3687-3694.
- (2014) J. Am. Chem. Soc. , vol.136 , pp. 3687-3694
- Kang, J.S.¹ Meier, J.L.² Dervan, P.B.³

35
- 0025008168
- T. D. Schneider, R. M. Stephens, Nucleic Acids Res. 1990, 18, 6097-6100;
- (1990) Nucleic Acids Res. , vol.18 , pp. 6097-6100
- Schneider, T.D.¹ Stephens, R.M.²

36
- 2142738304
- G. E. Crooks, G. Hon, J.-M. Chandonia, S. E. Brenner, Genome Res. 2004, 14, 1188-1190.
- (2004) Genome Res. , vol.14 , pp. 1188-1190
- Crooks, G.E.¹ Hon, G.² Chandonia, J.-M.³ Brenner, S.E.⁴

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