-
1
-
-
78650078496
-
Quantitative reactivity profiling predicts functional cysteines in proteomes
-
Weerapana, E., Wang, C., Simon, G. M., Richter, F., Khare, S., Dillon, M. B., Bachovchin, D. A., Mowen, K., Baker, D., and Cravatt, B. F. (2010) Quantitative reactivity profiling predicts functional cysteines in proteomes. Nature 468, 790-795
-
(2010)
Nature
, vol.468
, pp. 790-795
-
-
Weerapana, E.1
Wang, C.2
Simon, G.M.3
Richter, F.4
Khare, S.5
Dillon, M.B.6
Bachovchin, D.A.7
Mowen, K.8
Baker, D.9
Cravatt, B.F.10
-
2
-
-
84923919258
-
The basics of thiols and cysteines in redox biology and chemistry
-
Poole, L. B. (2015) The basics of thiols and cysteines in redox biology and chemistry. Free Radic. Biol. Med. 80, 148-157
-
(2015)
Free Radic. Biol. Med.
, vol.80
, pp. 148-157
-
-
Poole, L.B.1
-
3
-
-
84924045221
-
Mass spectrometry in studies of protein thiol chemistry and signaling: Opportunities and caveats
-
Baez, N. O., Reisz, J. A., and Furdui, C. M. (2015) Mass spectrometry in studies of protein thiol chemistry and signaling: Opportunities and caveats. Free Radic. Biol. Med. 80, 191-211
-
(2015)
Free Radic. Biol. Med.
, vol.80
, pp. 191-211
-
-
Baez, N.O.1
Reisz, J.A.2
Furdui, C.M.3
-
4
-
-
84880105471
-
Cysteine-mediated redox signaling: Chemistry, biology, and tools for discovery
-
Paulsen, C. E., and Carroll, K. S. (2013) Cysteine-mediated redox signaling: Chemistry, biology, and tools for discovery. Chem. Rev. 113, 4633-4679
-
(2013)
Chem. Rev.
, vol.113
, pp. 4633-4679
-
-
Paulsen, C.E.1
Carroll, K.S.2
-
5
-
-
84930208399
-
Peroxide-Dependent MGL Sulfenylation Regulates 2-AG-Mediated Endocannabinoid Signaling in Brain Neurons
-
Dotsey, E. Y., Jung, K. M., Basit, A., Wei, D., Daglian, J., Vacondio, F., Armirotti, A., Mor, M., and Piomelli, D. (2015) Peroxide-Dependent MGL Sulfenylation Regulates 2-AG-Mediated Endocannabinoid Signaling in Brain Neurons. Chem. Biol. 22, 619-628
-
(2015)
Chem. Biol.
, vol.22
, pp. 619-628
-
-
Dotsey, E.Y.1
Jung, K.M.2
Basit, A.3
Wei, D.4
Daglian, J.5
Vacondio, F.6
Armirotti, A.7
Mor, M.8
Piomelli, D.9
-
6
-
-
82755166890
-
Inhibition of pyruvate kinase M2 by reactive oxygen species contributes to cellular antioxidant responses
-
Anastasiou, D., Poulogiannis, G., Asara, J. M., Boxer, M. B., Jiang, J. K., Shen, M., Bellinger, G., Sasaki, A. T., Locasale, J. W., Auld, D. S., Thomas, C. J., Vander Heiden, M. G., and Cantley, L. C. (2011) Inhibition of pyruvate kinase M2 by reactive oxygen species contributes to cellular antioxidant responses. Science 334, 1278-1283
-
(2011)
Science
, vol.334
, pp. 1278-1283
-
-
Anastasiou, D.1
Poulogiannis, G.2
Asara, J.M.3
Boxer, M.B.4
Jiang, J.K.5
Shen, M.6
Bellinger, G.7
Sasaki, A.T.8
Locasale, J.W.9
Auld, D.S.10
Thomas, C.J.11
Vander Heiden, M.G.12
Cantley, L.C.13
-
7
-
-
83655163927
-
Peroxide-dependent sulfenylation of the EGFR catalytic site enhances kinase activity
-
Paulsen, C. E., Truong, T. H., Garcia, F. J., Homann, A., Gupta, V., Leonard, S. E., and Carroll, K. S. (2012) Peroxide-dependent sulfenylation of the EGFR catalytic site enhances kinase activity. Nat. Chem. Biol. 8, 57-64
-
(2012)
Nat. Chem. Biol.
, vol.8
, pp. 57-64
-
-
Paulsen, C.E.1
Truong, T.H.2
Garcia, F.J.3
Homann, A.4
Gupta, V.5
Leonard, S.E.6
Carroll, K.S.7
-
8
-
-
77958191599
-
ATM activation by oxidative stress
-
Guo, Z., Kozlov, S., Lavin, M. F., Person, M. D., and Paull, T. T. (2010) ATM activation by oxidative stress. Science 330, 517-521
-
(2010)
Science
, vol.330
, pp. 517-521
-
-
Guo, Z.1
Kozlov, S.2
Lavin, M.F.3
Person, M.D.4
Paull, T.T.5
-
9
-
-
84924921673
-
Peroxiredoxin-2 and STAT3 form a redox relay for H2O2 signaling
-
Sobotta, M. C., Liou, W., Stocker, S., Talwar, D., Oehler, M., Ruppert, T., Scharf, A. N., and Dick, T. P. (2015) Peroxiredoxin-2 and STAT3 form a redox relay for H2O2 signaling. Nat. Chem. Biol. 11, 64-70
-
(2015)
Nat. Chem. Biol.
, vol.11
, pp. 64-70
-
-
Sobotta, M.C.1
Liou, W.2
Stocker, S.3
Talwar, D.4
Oehler, M.5
Ruppert, T.6
Scharf, A.N.7
Dick, T.P.8
-
10
-
-
84875886251
-
Regulation of A20 and other OTU deubiquitinases by reversible oxidation
-
Kulathu, Y., Garcia, F. J., Mevissen, T. E., Busch, M., Arnaudo, N., Carroll, K. S., Barford, D., and Komander, D. (2013) Regulation of A20 and other OTU deubiquitinases by reversible oxidation. Nat. Commun. 4, 1569
-
(2013)
Nat. Commun.
, vol.4
, pp. 1569
-
-
Kulathu, Y.1
Garcia, F.J.2
Mevissen, T.E.3
Busch, M.4
Arnaudo, N.5
Carroll, K.S.6
Barford, D.7
Komander, D.8
-
11
-
-
84875912087
-
Reversible inactivation of deubiquitinases by reactive oxygen species in vitro and in cells
-
Lee, J. G., Baek, K., Soetandyo, N., and Ye, Y. (2013) Reversible inactivation of deubiquitinases by reactive oxygen species in vitro and in cells. Nat. Commun. 4, 1568
-
(2013)
Nat. Commun.
, vol.4
, pp. 1568
-
-
Lee, J.G.1
Baek, K.2
Soetandyo, N.3
Ye, Y.4
-
12
-
-
84890644637
-
Status of large-scale analysis of posttranslational modifications by mass spectrometry
-
Olsen, J. V., and Mann, M. (2013) Status of large-scale analysis of posttranslational modifications by mass spectrometry. Mol. Cell. Proteomics 12, 3444-3452
-
(2013)
Mol. Cell. Proteomics
, vol.12
, pp. 3444-3452
-
-
Olsen, J.V.1
Mann, M.2
-
13
-
-
84876148755
-
Protein analysis by shotgun/bottom-up proteomics
-
Zhang, Y., Fonslow, B. R., Shan, B., Baek, M. C., and Yates, J. R., 3rd. (2013) Protein analysis by shotgun/bottom-up proteomics. Chem. Rev. 113, 2343-2394
-
(2013)
Chem. Rev.
, vol.113
, pp. 2343-2394
-
-
Zhang, Y.1
Fonslow, B.R.2
Shan, B.3
Baek, M.C.4
Yates, J.R.5
-
14
-
-
0032546955
-
Reversible inactivation of protein-tyrosine phosphatase 1B in A431 cells stimulated with epidermal growth factor
-
Lee, S. R., Kwon, K. S., Kim, S. R., and Rhee, S. G. (1998) Reversible inactivation of protein-tyrosine phosphatase 1B in A431 cells stimulated with epidermal growth factor. J. Biol. Chem. 273, 15366-15372
-
(1998)
J. Biol. Chem.
, vol.273
, pp. 15366-15372
-
-
Lee, S.R.1
Kwon, K.S.2
Kim, S.R.3
Rhee, S.G.4
-
15
-
-
0032875697
-
Quantitative analysis of complex protein mixtures using isotope- coded affinity tags
-
Gygi, S. P., Rist, B., Gerber, S. A., Turecek, F., Gelb, M. H., and Aebersold, R. (1999) Quantitative analysis of complex protein mixtures using isotope- coded affinity tags. Nat. Biotechnol. 17, 994-999
-
(1999)
Nat. Biotechnol.
, vol.17
, pp. 994-999
-
-
Gygi, S.P.1
Rist, B.2
Gerber, S.A.3
Turecek, F.4
Gelb, M.H.5
Aebersold, R.6
-
16
-
-
11144252625
-
Isotope-coded affinity tag (ICAT) approach to redox proteomics: Identification and quantitation of oxidant-sensitive cysteine thiols in complex protein mixtures
-
Sethuraman, M., McComb, M. E., Huang, H., Huang, S., Heibeck, T., Costello, C. E., and Cohen, R. A. (2004) Isotope-coded affinity tag (ICAT) approach to redox proteomics: Identification and quantitation of oxidant-sensitive cysteine thiols in complex protein mixtures. J Proteome Res. 3, 1228-1233
-
(2004)
J Proteome Res.
, vol.3
, pp. 1228-1233
-
-
Sethuraman, M.1
McComb, M.E.2
Huang, H.3
Huang, S.4
Heibeck, T.5
Costello, C.E.6
Cohen, R.A.7
-
17
-
-
2642576571
-
Isotope-coded affinity tag approach to identify and quantify oxidant-sensitive protein thiols
-
Sethuraman, M., McComb, M. E., Heibeck, T., Costello, C. E., and Cohen, R. A. (2004) Isotope-coded affinity tag approach to identify and quantify oxidant-sensitive protein thiols. Mol. Cell. Proteomics 3, 273-278
-
(2004)
Mol. Cell. Proteomics
, vol.3
, pp. 273-278
-
-
Sethuraman, M.1
McComb, M.E.2
Heibeck, T.3
Costello, C.E.4
Cohen, R.A.5
-
18
-
-
55249116799
-
Quantitative analysis of redox-sensitive proteome with DIGE and ICAT
-
Fu, C., Hu, J., Liu, T., Ago, T., Sadoshima, J., and Li, H. (2008) Quantitative analysis of redox-sensitive proteome with DIGE and ICAT. J. Proteome Res. 7, 3789-3802
-
(2008)
J. Proteome Res.
, vol.7
, pp. 3789-3802
-
-
Fu, C.1
Hu, J.2
Liu, T.3
Ago, T.4
Sadoshima, J.5
Li, H.6
-
19
-
-
45549108466
-
Disparate proteome reactivity profiles of carbon electrophiles
-
Weerapana, E., Simon, G. M., and Cravatt, B. F. (2008) Disparate proteome reactivity profiles of carbon electrophiles. Nat. Chem. Biol. 4, 405-407
-
(2008)
Nat. Chem. Biol.
, vol.4
, pp. 405-407
-
-
Weerapana, E.1
Simon, G.M.2
Cravatt, B.F.3
-
20
-
-
84875182792
-
Proteome-wide quantification and characterization of oxidation-sensitive cysteines in pathogenic bacteria
-
Deng, X., Weerapana, E., Ulanovskaya, O., Sun, F., Liang, H., Ji, Q., Ye, Y., Fu, Y., Zhou, L., Li, J., Zhang, H., Wang, C., Alvarez, S., Hicks, L. M., Lan, L., Wu, M., Cravatt, B. F., and He, C. (2013) Proteome-wide quantification and characterization of oxidation-sensitive cysteines in pathogenic bacteria. Cell Host Microbe. 13, 358-370
-
(2013)
Cell Host Microbe.
, vol.13
, pp. 358-370
-
-
Deng, X.1
Weerapana, E.2
Ulanovskaya, O.3
Sun, F.4
Liang, H.5
Ji, Q.6
Ye, Y.7
Fu, Y.8
Zhou, L.9
Li, J.10
Zhang, H.11
Wang, C.12
Alvarez, S.13
Hicks, L.M.14
Lan, L.15
Wu, M.16
Cravatt, B.F.17
He, C.18
-
21
-
-
84935851818
-
A caged electrophilic probe for global analysis of cysteine reactivity in living cells
-
Abo, M., and Weerapana, E. (2015) A Caged Electrophilic Probe for Global Analysis of Cysteine Reactivity in Living Cells. J. Am. Chem. Soc. 137, 7087-7090
-
(2015)
J. Am. Chem. Soc.
, vol.137
, pp. 7087-7090
-
-
Abo, M.1
Weerapana, E.2
-
22
-
-
0035147435
-
Protein S-nitrosylation: A physiological signal for neuronal nitric oxide
-
Jaffrey, S. R., Erdjument-Bromage, H., Ferris, C. D., Tempst, P., and Snyder, S. H. (2001) Protein S-nitrosylation: A physiological signal for neuronal nitric oxide. Nat. Cell Biol. 3, 193-197
-
(2001)
Nat. Cell Biol.
, vol.3
, pp. 193-197
-
-
Jaffrey, S.R.1
Erdjument-Bromage, H.2
Ferris, C.D.3
Tempst, P.4
Snyder, S.H.5
-
23
-
-
79953179727
-
Site-mapping of in vitro S-nitrosation in cardiac mitochondria: Implications for cardioprotection
-
Murray, C. I., Kane, L. A., Uhrigshardt, H., Wang, S. B., and Van Eyk, J. E. (2011) Site-mapping of in vitro S-nitrosation in cardiac mitochondria: Implications for cardioprotection. Mol. Cell. Proteomics 10, M110 004721
-
(2011)
Mol. Cell. Proteomics
, vol.10
, pp. M110004721
-
-
Murray, C.I.1
Kane, L.A.2
Uhrigshardt, H.3
Wang, S.B.4
Van Eyk, J.E.5
-
24
-
-
84857418728
-
Proteomic identification of S-nitrosylated Golgi proteins: New insights into endothelial cell regulation by eNOS-derived NO
-
Sangwung, P., Greco, T. M., Wang, Y., Ischiropoulos, H., Sessa, W. C., and Iwakiri, Y. (2012) Proteomic identification of S-nitrosylated Golgi proteins: New insights into endothelial cell regulation by eNOS-derived NO. PLoS ONE 7, e31564
-
(2012)
PLoS ONE
, vol.7
, pp. e31564
-
-
Sangwung, P.1
Greco, T.M.2
Wang, Y.3
Ischiropoulos, H.4
Sessa, W.C.5
Iwakiri, Y.6
-
25
-
-
84898432221
-
Quantitative label-free redox proteomics of reversible cysteine oxidation in red blood cell membranes
-
Zaccarin, M., Falda, M., Roveri, A., Bosello-Travain, V., Bordin, L., Maiorino, M., Ursini, F., and Toppo, S. (2014) Quantitative label-free redox proteomics of reversible cysteine oxidation in red blood cell membranes. Free Radic. Biol. Med. 71, 90-98
-
(2014)
Free Radic. Biol. Med.
, vol.71
, pp. 90-98
-
-
Zaccarin, M.1
Falda, M.2
Roveri, A.3
Bosello-Travain, V.4
Bordin, L.5
Maiorino, M.6
Ursini, F.7
Toppo, S.8
-
26
-
-
77949400181
-
Comprehensive identification and modified-site mapping of S-nitrosylated targets in prostate epithelial cells
-
Lam, Y. W., Yuan, Y., Isaac, J., Babu, C. V., Meller, J., and Ho, S. M. (2010) Comprehensive identification and modified-site mapping of S-nitrosylated targets in prostate epithelial cells. PLoS ONE 5, e9075
-
(2010)
PLoS ONE
, vol.5
, pp. e9075
-
-
Lam, Y.W.1
Yuan, Y.2
Isaac, J.3
Babu, C.V.4
Meller, J.5
Ho, S.M.6
-
27
-
-
84879189969
-
Proteomic analysis of S-nitrosylated proteins in potato plant
-
Kato, H., Takemoto, D., and Kawakita, K. (2013) Proteomic analysis of S-nitrosylated proteins in potato plant. Physiol. Plant 148, 371-386
-
(2013)
Physiol. Plant
, vol.148
, pp. 371-386
-
-
Kato, H.1
Takemoto, D.2
Kawakita, K.3
-
28
-
-
84887934400
-
Application of iTRAQ Reagents to Relatively Quantify the Reversible Redox State of Cysteine Residues
-
McDonagh, B., Martinez-Acedo, P., Vazquez, J., Padilla, C. A., Sheehan, D., and Barcena, J. A. (2012) Application of iTRAQ Reagents to Relatively Quantify the Reversible Redox State of Cysteine Residues. Int. J. Proteomics 2012, 514847
-
(2012)
Int. J. Proteomics
, vol.2012
, pp. 514847
-
-
McDonagh, B.1
Martinez-Acedo, P.2
Vazquez, J.3
Padilla, C.A.4
Sheehan, D.5
Barcena, J.A.6
-
29
-
-
80054711041
-
Protein S-glutathionylation in malaria parasites
-
Kehr, S., Jortzik, E., Delahunty, C., Yates, J. R., 3rd, Rahlfs, S., and Becker, K. (2011) Protein S-glutathionylation in malaria parasites. Antioxid. Redox. Signal. 15, 2855-2865
-
(2011)
Antioxid. Redox. Signal.
, vol.15
, pp. 2855-2865
-
-
Kehr, S.1
Jortzik, E.2
Delahunty, C.3
Yates, J.R.4
Rahlfs, S.5
Becker, K.6
-
30
-
-
77956302110
-
ESNOQ, proteomic quantification of endogenous S-nitrosation
-
Zhou, X., Han, P., Li, J., Zhang, X., Huang, B., Ruan, H. Q., and Chen, C. (2010) ESNOQ, proteomic quantification of endogenous S-nitrosation. PLoS ONE 5, e10015
-
(2010)
PLoS ONE
, vol.5
, pp. e10015
-
-
Zhou, X.1
Han, P.2
Li, J.3
Zhang, X.4
Huang, B.5
Ruan, H.Q.6
Chen, C.7
-
31
-
-
84863937729
-
SNO spectral counting (SNOSC), a label-free proteomic method for quantification of changes in levels of protein S-nitrosation
-
Zhang, X., Huang, B., and Chen, C. (2012) SNO spectral counting (SNOSC), a label-free proteomic method for quantification of changes in levels of protein S-nitrosation. Free Radic. Res. 46, 1044-1050
-
(2012)
Free Radic. Res.
, vol.46
, pp. 1044-1050
-
-
Zhang, X.1
Huang, B.2
Chen, C.3
-
32
-
-
84899542656
-
Monitoring in vivo reversible cysteine oxidation in proteins using ICAT and mass spectrometry
-
Garcia-Santamarina, S., Boronat, S., Domenech, A., Ayte, J., Molina, H., and Hidalgo, E. (2014) Monitoring in vivo reversible cysteine oxidation in proteins using ICAT and mass spectrometry. Nat. Protoc. 9, 1131-1145
-
(2014)
Nat. Protoc.
, vol.9
, pp. 1131-1145
-
-
Garcia-Santamarina, S.1
Boronat, S.2
Domenech, A.3
Ayte, J.4
Molina, H.5
Hidalgo, E.6
-
33
-
-
84855895599
-
Proteomics investigation of endogenous S-nitrosylation in Arabidopsis
-
Fares, A., Rossignol, M., and Peltier, J. B. (2011) Proteomics investigation of endogenous S-nitrosylation in Arabidopsis. Biochem. Biophys. Res. Commun. 416, 331-336
-
(2011)
Biochem. Biophys. Res. Commun.
, vol.416
, pp. 331-336
-
-
Fares, A.1
Rossignol, M.2
Peltier, J.B.3
-
34
-
-
84889598514
-
Identification of endogenously S-nitrosylated proteins in Arabidopsis plantlets: Effect of cold stress on cysteine nitrosylation level
-
Puyaubert, J., Fares, A., Reze, N., Peltier, J. B., and Baudouin, E. (2014) Identification of endogenously S-nitrosylated proteins in Arabidopsis plantlets: Effect of cold stress on cysteine nitrosylation level. Plant Sci. 215-216, 150-156
-
(2014)
Plant Sci.
, vol.215-216
, pp. 150-156
-
-
Puyaubert, J.1
Fares, A.2
Reze, N.3
Peltier, J.B.4
Baudouin, E.5
-
35
-
-
84875974995
-
Redox proteomics of thiol proteins in mouse heart during ischemia/reperfusion using ICAT reagents and mass spectrometry
-
Kumar, V., Kleffmann, T., Hampton, M. B., Cannell, M. B., and Winterbourn, C. C. (2013) Redox proteomics of thiol proteins in mouse heart during ischemia/reperfusion using ICAT reagents and mass spectrometry. Free Radic. Biol. Med. 58, 109-117
-
(2013)
Free Radic. Biol. Med.
, vol.58
, pp. 109-117
-
-
Kumar, V.1
Kleffmann, T.2
Hampton, M.B.3
Cannell, M.B.4
Winterbourn, C.C.5
-
36
-
-
80054858298
-
The oxidized thiol proteome in fission yeast-optimization of an ICAT-based method to identify H2O2-oxidized proteins
-
Garcia-Santamarina, S., Boronat, S., Espadas, G., Ayte, J., Molina, H., and Hidalgo, E. (2011) The oxidized thiol proteome in fission yeast-optimization of an ICAT-based method to identify H2O2-oxidized proteins. J. Proteomics 74, 2476-2486
-
(2011)
J. Proteomics
, vol.74
, pp. 2476-2486
-
-
Garcia-Santamarina, S.1
Boronat, S.2
Espadas, G.3
Ayte, J.4
Molina, H.5
Hidalgo, E.6
-
37
-
-
46149125288
-
Quantifying changes in the thiol redox proteome upon oxidative stress in vivo
-
Leichert, L. I., Gehrke, F., Gudiseva, H. V., Blackwell, T., Ilbert, M., Walker, A. K., Strahler, J. R., Andrews, P. C., and Jakob, U. (2008) Quantifying changes in the thiol redox proteome upon oxidative stress in vivo. Proc. Natl. Acad. Sci. U.S.A. 105, 8197-8202
-
(2008)
Proc. Natl. Acad. Sci. U.S.A.
, vol.105
, pp. 8197-8202
-
-
Leichert, L.I.1
Gehrke, F.2
Gudiseva, H.V.3
Blackwell, T.4
Ilbert, M.5
Walker, A.K.6
Strahler, J.R.7
Andrews, P.C.8
Jakob, U.9
-
38
-
-
84887114785
-
Selective targeting of the cysteine proteome by thioredoxin and glutathione redox systems
-
Go, Y. M., Roede, J. R., Walker, D. I., Duong, D. M., Seyfried, N. T., Orr, M., Liang, Y., Pennell, K. D., and Jones, D. P. (2013) Selective targeting of the cysteine proteome by thioredoxin and glutathione redox systems. Mol. Cell. Proteomics 12, 3285-3296
-
(2013)
Mol. Cell. Proteomics
, vol.12
, pp. 3285-3296
-
-
Go, Y.M.1
Roede, J.R.2
Walker, D.I.3
Duong, D.M.4
Seyfried, N.T.5
Orr, M.6
Liang, Y.7
Pennell, K.D.8
Jones, D.P.9
-
39
-
-
82355181555
-
Using quantitative redox proteomics to dissect the yeast redoxome
-
Brandes, N., Reichmann, D., Tienson, H., Leichert, L. I., and Jakob, U. (2011) Using quantitative redox proteomics to dissect the yeast redoxome. J. Biol. Chem. 286, 41893-41903
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 41893-41903
-
-
Brandes, N.1
Reichmann, D.2
Tienson, H.3
Leichert, L.I.4
Jakob, U.5
-
40
-
-
84879068406
-
Time line of redox events in aging postmitotic cells
-
Brandes, N., Tienson, H., Lindemann, A., Vitvitsky, V., Reichmann, D., Banerjee, R., and Jakob, U. (2013) Time line of redox events in aging postmitotic cells. Elife 2, e00306
-
(2013)
Elife
, vol.2
, pp. e00306
-
-
Brandes, N.1
Tienson, H.2
Lindemann, A.3
Vitvitsky, V.4
Reichmann, D.5
Banerjee, R.6
Jakob, U.7
-
41
-
-
84866272849
-
Quantitative in vivo redox sensors uncover oxidative stress as an early event in life
-
Knoefler, D., Thamsen, M., Koniczek, M., Niemuth, N. J., Diederich, A. K., and Jakob, U. (2012) Quantitative in vivo redox sensors uncover oxidative stress as an early event in life. Mol. Cell 47, 767-776
-
(2012)
Mol. Cell
, vol.47
, pp. 767-776
-
-
Knoefler, D.1
Thamsen, M.2
Koniczek, M.3
Niemuth, N.J.4
Diederich, A.K.5
Jakob, U.6
-
42
-
-
84933676432
-
Fasting, but Not Aging, Dramatically Alters the Redox Status of Cysteine Residues on Proteins in Drosophila melanogaster
-
Menger, K. E., James, A. M., Cocheme, H. M., Harbour, M. E., Chouchani, E. T., Ding, S., Fearnley, I. M., Partridge, L., and Murphy, M. P. (2015) Fasting, but Not Aging, Dramatically Alters the Redox Status of Cysteine Residues on Proteins in Drosophila melanogaster. Cell. Rep. 11, 1856-1865
-
(2015)
Cell. Rep.
, vol.11
, pp. 1856-1865
-
-
Menger, K.E.1
James, A.M.2
Cocheme, H.M.3
Harbour, M.E.4
Chouchani, E.T.5
Ding, S.6
Fearnley, I.M.7
Partridge, L.8
Murphy, M.P.9
-
43
-
-
84894298061
-
Mapping the diatom redox-sensitive proteome provides insight into response to nitrogen stress in the marine environment
-
Rosenwasser, S., Graff van Creveld, S., Schatz, D., Malitsky, S., Tzfadia, O., Aharoni, A., Levin, Y., Gabashvili, A., Feldmesser, E., and Vardi, A. (2014) Mapping the diatom redox-sensitive proteome provides insight into response to nitrogen stress in the marine environment. Proc. Natl. Acad. Sci. U.S.A. 111, 2740-2745
-
(2014)
Proc. Natl. Acad. Sci. U.S.A.
, vol.111
, pp. 2740-2745
-
-
Rosenwasser, S.1
Graff Van Creveld, S.2
Schatz, D.3
Malitsky, S.4
Tzfadia, O.5
Aharoni, A.6
Levin, Y.7
Gabashvili, A.8
Feldmesser, E.9
Vardi, A.10
-
44
-
-
12444345515
-
Tandem mass tags: A novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS
-
Thompson, A., Schafer, J., Kuhn, K., Kienle, S., Schwarz, J., Schmidt, G., Neumann, T., Johnstone, R., Mohammed, A. K., and Hamon, C. (2003) Tandem mass tags: A novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS. Anal. Chem. 75, 1895-1904
-
(2003)
Anal. Chem.
, vol.75
, pp. 1895-1904
-
-
Thompson, A.1
Schafer, J.2
Kuhn, K.3
Kienle, S.4
Schwarz, J.5
Schmidt, G.6
Neumann, T.7
Johnstone, R.8
Mohammed, A.K.9
Hamon, C.10
-
45
-
-
84935104408
-
Proteome-wide identification and quantification of S-glutathionylation targets in mouse liver
-
McGarry, D. J., Chen, W., Chakravarty, P., Lamont, D. J., Wolf, C. R., and Henderson, C. J. (2015) Proteome-wide identification and quantification of S-glutathionylation targets in mouse liver. Biochem. J. 469, 25-32
-
(2015)
Biochem. J.
, vol.469
, pp. 25-32
-
-
McGarry, D.J.1
Chen, W.2
Chakravarty, P.3
Lamont, D.J.4
Wolf, C.R.5
Henderson, C.J.6
-
46
-
-
84903716297
-
Proteomic quantification and site-mapping of S-nitrosylated proteins using isobaric iodoTMT reagents
-
Qu, Z., Meng, F., Bomgarden, R. D., Viner, R. I., Li, J., Rogers, J. C., Cheng, J., Greenlief, C. M., Cui, J., Lubahn, D. B., Sun, G. Y., and Gu, Z. (2014) Proteomic quantification and site-mapping of S-nitrosylated proteins using isobaric iodoTMT reagents. J. Proteome Res. 13, 3200-3211
-
(2014)
J. Proteome Res.
, vol.13
, pp. 3200-3211
-
-
Qu, Z.1
Meng, F.2
Bomgarden, R.D.3
Viner, R.I.4
Li, J.5
Rogers, J.C.6
Cheng, J.7
Greenlief, C.M.8
Cui, J.9
Lubahn, D.B.10
Sun, G.Y.11
Gu, Z.12
-
47
-
-
84856717563
-
Identification and quantification of S-nitrosylation by cysteine reactive tandem mass tag switch assay
-
Murray, C. I., Uhrigshardt, H., O'Meally, R. N., Cole, R. N., and Van Eyk, J. E. (2012) Identification and quantification of S-nitrosylation by cysteine reactive tandem mass tag switch assay. Mol. Cell. Proteomics 11, M111 013441
-
(2012)
Mol. Cell. Proteomics
, vol.11
, pp. M111013441
-
-
Murray, C.I.1
Uhrigshardt, H.2
O'Meally, R.N.3
Cole, R.N.4
Van Eyk, J.E.5
-
48
-
-
84919363563
-
The SNO/SOH TMT strategy for combinatorial analysis of reversible cysteine oxidations
-
Wojdyla, K., Williamson, J., Roepstorff, P., and Rogowska-Wrzesinska, A. (2015) The SNO/SOH TMT strategy for combinatorial analysis of reversible cysteine oxidations. J. Proteomics 113, 415-434
-
(2015)
J. Proteomics
, vol.113
, pp. 415-434
-
-
Wojdyla, K.1
Williamson, J.2
Roepstorff, P.3
Rogowska-Wrzesinska, A.4
-
49
-
-
84896877469
-
Mass spectrometry- based quantitative proteomics for dissecting multiplexed redox cysteine modifications in nitric oxide-protected cardiomyocyte under hypoxia
-
Pan, K. T., Chen, Y. Y., Pu, T. H., Chao, Y. S., Yang, C. Y., Bomgarden, R. D., Rogers, J. C., Meng, T. C., and Khoo, K. H. (2014) Mass spectrometry- based quantitative proteomics for dissecting multiplexed redox cysteine modifications in nitric oxide-protected cardiomyocyte under hypoxia. Antioxid. Redox. Signal. 20, 1365-1381
-
(2014)
Antioxid. Redox. Signal.
, vol.20
, pp. 1365-1381
-
-
Pan, K.T.1
Chen, Y.Y.2
Pu, T.H.3
Chao, Y.S.4
Yang, C.Y.5
Bomgarden, R.D.6
Rogers, J.C.7
Meng, T.C.8
Khoo, K.H.9
-
50
-
-
67149105766
-
Proteomic analysis of S-nitrosylation and denitrosylation by resin-assisted capture
-
Forrester, M. T., Thompson, J. W., Foster, M. W., Nogueira, L., Moseley, M. A., and Stamler, J. S. (2009) Proteomic analysis of S-nitrosylation and denitrosylation by resin-assisted capture. Nat. Biotechnol. 27, 557-559
-
(2009)
Nat. Biotechnol.
, vol.27
, pp. 557-559
-
-
Forrester, M.T.1
Thompson, J.W.2
Foster, M.W.3
Nogueira, L.4
Moseley, M.A.5
Stamler, J.S.6
-
51
-
-
84873046180
-
Quantitative sitespecific reactivity profiling of S-nitrosylation in mouse skeletal muscle using cysteinyl peptide enrichment coupled with mass spectrometry
-
Su, D., Shukla, A. K., Chen, B., Kim, J. S., Nakayasu, E., Qu, Y., Aryal, U., Weitz, K., Clauss, T. R., Monroe, M. E., Camp, D. G., 2nd, Bigelow, D. J., Smith, R. D., Kulkarni, R. N., and Qian, W. J. (2013) Quantitative sitespecific reactivity profiling of S-nitrosylation in mouse skeletal muscle using cysteinyl peptide enrichment coupled with mass spectrometry. Free Radic. Biol. Med. 57, 68-78
-
(2013)
Free Radic. Biol. Med.
, vol.57
, pp. 68-78
-
-
Su, D.1
Shukla, A.K.2
Chen, B.3
Kim, J.S.4
Nakayasu, E.5
Qu, Y.6
Aryal, U.7
Weitz, K.8
Clauss, T.R.9
Monroe, M.E.10
Camp, D.G.11
Bigelow, D.J.12
Smith, R.D.13
Kulkarni, R.N.14
Qian, W.J.15
-
52
-
-
84894103105
-
Proteomic identification and quantification of S-glutathionylation in mouse macrophages using resin-assisted enrichment and isobaric labeling
-
Su, D., Gaffrey, M. J., Guo, J., Hatchell, K. E., Chu, R. K., Clauss, T. R., Aldrich, J. T., Wu, S., Purvine, S., Camp, D. G., Smith, R. D., Thrall, B. D., and Qian, W. J. (2014) Proteomic identification and quantification of S-glutathionylation in mouse macrophages using resin-assisted enrichment and isobaric labeling. Free Radic. Biol. Med. 67, 460-470
-
(2014)
Free Radic. Biol. Med.
, vol.67
, pp. 460-470
-
-
Su, D.1
Gaffrey, M.J.2
Guo, J.3
Hatchell, K.E.4
Chu, R.K.5
Clauss, T.R.6
Aldrich, J.T.7
Wu, S.8
Purvine, S.9
Camp, D.G.10
Smith, R.D.11
Thrall, B.D.12
Qian, W.J.13
-
53
-
-
84924918487
-
Proteome-wide light/dark modulation of thiol oxidation in cyanobacteria revealed by quantitative site-specific redox proteomics
-
Guo, J., Nguyen, A. Y., Dai, Z., Su, D., Gaffrey, M. J., Moore, R. J., Jacobs, J. M., Monroe, M. E., Smith, R. D., Koppenaal, D. W., Pakrasi, H. B., and Qian, W. J. (2014) Proteome-wide light/dark modulation of thiol oxidation in cyanobacteria revealed by quantitative site-specific redox proteomics. Mol. Cell. Proteomics 13, 3270-3285
-
(2014)
Mol. Cell. Proteomics
, vol.13
, pp. 3270-3285
-
-
Guo, J.1
Nguyen, A.Y.2
Dai, Z.3
Su, D.4
Gaffrey, M.J.5
Moore, R.J.6
Jacobs, J.M.7
Monroe, M.E.8
Smith, R.D.9
Koppenaal, D.W.10
Pakrasi, H.B.11
Qian, W.J.12
-
54
-
-
84888301385
-
Thiol-blocking electrophiles interfere with labeling and detection of protein sulfenic acids
-
Reisz, J. A., Bechtold, E., King, S. B., Poole, L. B., and Furdui, C. M. (2013) Thiol-blocking electrophiles interfere with labeling and detection of protein sulfenic acids. FEBS J. 280, 6150-6161
-
(2013)
FEBS J.
, vol.280
, pp. 6150-6161
-
-
Reisz, J.A.1
Bechtold, E.2
King, S.B.3
Poole, L.B.4
Furdui, C.M.5
-
55
-
-
84871717977
-
Characterization of reaction conditions providing rapid and specific cysteine alkylation for peptide-based mass spectrometry
-
Paulech, J., Solis, N., and Cordwell, S. J. (2013) Characterization of reaction conditions providing rapid and specific cysteine alkylation for peptide-based mass spectrometry. Biochim. Biophys. Acta 1834, 372-379
-
(2013)
Biochim. Biophys. Acta
, vol.1834
, pp. 372-379
-
-
Paulech, J.1
Solis, N.2
Cordwell, S.J.3
-
56
-
-
84908193840
-
Chemical-proteomic strategies to investigate cysteine posttranslational modifications
-
Couvertier, S. M., Zhou, Y., and Weerapana, E. (2014) Chemical-proteomic strategies to investigate cysteine posttranslational modifications. Biochim. Biophys. Acta 1844, 2315-2330
-
(2014)
Biochim. Biophys. Acta
, vol.1844
, pp. 2315-2330
-
-
Couvertier, S.M.1
Zhou, Y.2
Weerapana, E.3
-
57
-
-
33644669954
-
The utility of N, N-biotinyl glutathione disulfide in the study of protein S-glutathiolation
-
Brennan, J. P., Miller, J. I., Fuller, W., Wait, R., Begum, S., Dunn, M. J., and Eaton, P. (2006) The utility of N, N-biotinyl glutathione disulfide in the study of protein S-glutathiolation. Mol. Cell. Proteomics 5, 215-225
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 215-225
-
-
Brennan, J.P.1
Miller, J.I.2
Fuller, W.3
Wait, R.4
Begum, S.5
Dunn, M.J.6
Eaton, P.7
-
58
-
-
0034641689
-
Identification of oxidant-sensitive proteins: TNF-alpha induces protein glutathiolation
-
Sullivan, D. M., Wehr, N. B., Fergusson, M. M., Levine, R. L., and Finkel, T. (2000) Identification of oxidant-sensitive proteins: TNF-alpha induces protein glutathiolation. Biochemistry 39, 11121-11128
-
(2000)
Biochemistry
, vol.39
, pp. 11121-11128
-
-
Sullivan, D.M.1
Wehr, N.B.2
Fergusson, M.M.3
Levine, R.L.4
Finkel, T.5
-
59
-
-
84920281476
-
First proteomic study of S-glutathionylation in cyanobacteria
-
Chardonnet, S., Sakr, S., Cassier-Chauvat, C., Le Marechal, P., Chauvat, F., Lemaire, S. D., and Decottignies, P. (2015) First proteomic study of S-glutathionylation in cyanobacteria. J. Proteome Res. 14, 59-71
-
(2015)
J. Proteome Res.
, vol.14
, pp. 59-71
-
-
Chardonnet, S.1
Sakr, S.2
Cassier-Chauvat, C.3
Le Marechal, P.4
Chauvat, F.5
Lemaire, S.D.6
Decottignies, P.7
-
60
-
-
84856753212
-
Glutathionylation in the photosynthetic model organism Chlamydomonas reinhardtii: A proteomic survey
-
Zaffagnini, M., Bedhomme, M., Groni, H., Marchand, C. H., Puppo, C., Gontero, B., Cassier-Chauvat, C., Decottignies, P., and Lemaire, S. D. (2012) Glutathionylation in the photosynthetic model organism Chlamydomonas reinhardtii: A proteomic survey. Mol. Cell. Proteomics 11, M111 014142
-
(2012)
Mol. Cell. Proteomics
, vol.11
, pp. M111014142
-
-
Zaffagnini, M.1
Bedhomme, M.2
Groni, H.3
Marchand, C.H.4
Puppo, C.5
Gontero, B.6
Cassier-Chauvat, C.7
Decottignies, P.8
Lemaire, S.D.9
-
61
-
-
84906347101
-
Metabolic synthesis of clickable glutathione for chemoselective detection of glutathionylation
-
Samarasinghe, K. T., Munkanatta Godage, D. N., VanHecke, G. C., and Ahn, Y. H. (2014) Metabolic synthesis of clickable glutathione for chemoselective detection of glutathionylation. J. Am. Chem. Soc. 136, 11566-11569
-
(2014)
J. Am. Chem. Soc.
, vol.136
, pp. 11566-11569
-
-
Samarasinghe, K.T.1
Munkanatta Godage, D.N.2
VanHecke, G.C.3
Ahn, Y.H.4
-
62
-
-
37049066149
-
A scheme for the colorimetric determination of microgram amounts of thiols
-
Saville, B. (1958) A scheme for the colorimetric determination of microgram amounts of thiols. Analyst 83, 670-672
-
(1958)
Analyst
, vol.83
, pp. 670-672
-
-
Saville, B.1
-
63
-
-
78049288138
-
Structural profiling of endogenous S-nitrosocysteine residues reveals unique features that accommodate diverse mechanisms for protein S-nitrosylation
-
Doulias, P. T., Greene, J. L., Greco, T. M., Tenopoulou, M., Seeholzer, S. H., Dunbrack, R. L., and Ischiropoulos, H. (2010) Structural profiling of endogenous S-nitrosocysteine residues reveals unique features that accommodate diverse mechanisms for protein S-nitrosylation. Proc. Natl. Acad. Sci. U.S.A. 107, 16958-16963
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 16958-16963
-
-
Doulias, P.T.1
Greene, J.L.2
Greco, T.M.3
Tenopoulou, M.4
Seeholzer, S.H.5
Dunbrack, R.L.6
Ischiropoulos, H.7
-
64
-
-
84872577684
-
Nitric oxide regulates mitochondrial fatty acid metabolism through reversible protein S-nitrosylation
-
Doulias, P. T., Tenopoulou, M., Greene, J. L., Raju, K., and Ischiropoulos, H. (2013) Nitric oxide regulates mitochondrial fatty acid metabolism through reversible protein S-nitrosylation. Sci. Signal. 6, rs1
-
(2013)
Sci. Signal.
, vol.6
, pp. rs1
-
-
Doulias, P.T.1
Tenopoulou, M.2
Greene, J.L.3
Raju, K.4
Ischiropoulos, H.5
-
65
-
-
84936869077
-
Regulation of brain glutamate metabolism by nitric oxide and S-nitrosylation
-
Raju, K., Doulias, P. T., Evans, P., Krizman, E. N., Jackson, J. G., Horyn, O., Daikhin, Y., Nissim, I., Yudkoff, M., Nissim, I., Sharp, K. A., Robinson, M. B., and Ischiropoulos, H. (2015) Regulation of brain glutamate metabolism by nitric oxide and S-nitrosylation. Sci. Signal. 8, ra68
-
(2015)
Sci. Signal.
, vol.8
, pp. ra68
-
-
Raju, K.1
Doulias, P.T.2
Evans, P.3
Krizman, E.N.4
Jackson, J.G.5
Horyn, O.6
Daikhin, Y.7
Nissim, I.8
Yudkoff, M.9
Nissim, I.10
Sharp, K.A.11
Robinson, M.B.12
Ischiropoulos, H.13
-
66
-
-
79851509433
-
Chemical methods to detect S-nitrosation
-
Wang, H., and Xian, M. (2011) Chemical methods to detect S-nitrosation. Curr. Opin. Chem. Biol. 15, 32-37
-
(2011)
Curr. Opin. Chem. Biol.
, vol.15
, pp. 32-37
-
-
Wang, H.1
Xian, M.2
-
67
-
-
84882709641
-
Methods for detection and characterization of protein S-nitrosylation
-
Chen, Y. J., Ching, W. C., Lin, Y. P., and Chen, Y. J. (2013) Methods for detection and characterization of protein S-nitrosylation. Methods 62, 138-150
-
(2013)
Methods
, vol.62
, pp. 138-150
-
-
Chen, Y.J.1
Ching, W.C.2
Lin, Y.P.3
Chen, Y.J.4
-
68
-
-
84864627599
-
Chemical methods for the direct detection and labeling of S-nitrosothiols
-
Bechtold, E., and King, S. B. (2012) Chemical methods for the direct detection and labeling of S-nitrosothiols. Antioxid. Redox. Signal. 17, 981-991
-
(2012)
Antioxid. Redox. Signal.
, vol.17
, pp. 981-991
-
-
Bechtold, E.1
King, S.B.2
-
69
-
-
84878233158
-
Mechanism-based triarylphosphine-ester probes for capture of endogenous RSNOs
-
Seneviratne, U., Godoy, L. C., Wishnok, J. S., Wogan, G. N., and Tannenbaum, S. R. (2013) Mechanism-based triarylphosphine-ester probes for capture of endogenous RSNOs. J. Am. Chem. Soc. 135, 7693-7704
-
(2013)
J. Am. Chem. Soc.
, vol.135
, pp. 7693-7704
-
-
Seneviratne, U.1
Godoy, L.C.2
Wishnok, J.S.3
Wogan, G.N.4
Tannenbaum, S.R.5
-
70
-
-
84898619573
-
A reductive ligation based fluorescent probe for S-nitrosothiols
-
Zhang, D., Chen, W., Miao, Z., Ye, Y., Zhao, Y., King, S. B., and Xian, M. (2014) A reductive ligation based fluorescent probe for S-nitrosothiols. Chem. Commun. 50, 4806-4809
-
(2014)
Chem. Commun.
, vol.50
, pp. 4806-4809
-
-
Zhang, D.1
Chen, W.2
Miao, Z.3
Ye, Y.4
Zhao, Y.5
King, S.B.6
Xian, M.7
-
71
-
-
77951137130
-
Water-soluble triarylphosphines as biomarkers for protein S-nitrosation
-
Bechtold, E., Reisz, J. A., Klomsiri, C., Tsang, A. W., Wright, M. W., Poole, L. B., Furdui, C. M., and King, S. B. (2010) Water-soluble triarylphosphines as biomarkers for protein S-nitrosation. ACS Chem. Biol. 5, 405-414
-
(2010)
ACS Chem. Biol.
, vol.5
, pp. 405-414
-
-
Bechtold, E.1
Reisz, J.A.2
Klomsiri, C.3
Tsang, A.W.4
Wright, M.W.5
Poole, L.B.6
Furdui, C.M.7
King, S.B.8
-
72
-
-
77956596119
-
Reductive ligation mediated one-step disulfide formation of S-nitrosothiols
-
Zhang, J., Li, S., Zhang, D., Wang, H., Whorton, A. R., and Xian, M. (2010) Reductive ligation mediated one-step disulfide formation of S-nitrosothiols. Org. Lett. 12, 4208-4211
-
(2010)
Org. Lett.
, vol.12
, pp. 4208-4211
-
-
Zhang, J.1
Li, S.2
Zhang, D.3
Wang, H.4
Whorton, A.R.5
Xian, M.6
-
73
-
-
84890120403
-
Sulfenic acid chemistry, detection and cellular lifetime
-
Gupta, V., and Carroll, K. S. (2014) Sulfenic acid chemistry, detection and cellular lifetime. Biochim. Biophys. Acta 1840, 847-875
-
(2014)
Biochim. Biophys. Acta
, vol.1840
, pp. 847-875
-
-
Gupta, V.1
Carroll, K.S.2
-
74
-
-
0016256290
-
The inactivation of the acyl phosphatase activity catalyzed by the sulfenic acid form of glyceraldehyde 3-phosphate dehydrogenase by dimedone and olefins
-
Benitez, L. V., and Allison, W. S. (1974) The inactivation of the acyl phosphatase activity catalyzed by the sulfenic acid form of glyceraldehyde 3-phosphate dehydrogenase by dimedone and olefins. J. Biol. Chem. 249, 6234-6243
-
(1974)
J. Biol. Chem.
, vol.249
, pp. 6234-6243
-
-
Benitez, L.V.1
Allison, W.S.2
-
75
-
-
84888599347
-
Chemical biology approaches to study protein cysteine sulfenylation
-
Pan, J., and Carroll, K. S. (2014) Chemical biology approaches to study protein cysteine sulfenylation. Biopolymers 101, 165-172
-
(2014)
Biopolymers
, vol.101
, pp. 165-172
-
-
Pan, J.1
Carroll, K.S.2
-
76
-
-
34848821197
-
Protein sulfenation as a redox sensor: Proteomics studies using a novel biotinylated dimedone analogue
-
Charles, R. L., Schroder, E., May, G., Free, P., Gaffney, P. R., Wait, R., Begum, S., Heads, R. J., and Eaton, P. (2007) Protein sulfenation as a redox sensor: Proteomics studies using a novel biotinylated dimedone analogue. Mol. Cell. Proteomics 6, 1473-1484
-
(2007)
Mol. Cell. Proteomics
, vol.6
, pp. 1473-1484
-
-
Charles, R.L.1
Schroder, E.2
May, G.3
Free, P.4
Gaffney, P.R.5
Wait, R.6
Begum, S.7
Heads, R.J.8
Eaton, P.9
-
77
-
-
36849020604
-
Fluorescent and affinity-based tools to detect cysteine sulfenic acid formation in proteins
-
Poole, L. B., Klomsiri, C., Knaggs, S. A., Furdui, C. M., Nelson, K. J., Thomas, M. J., Fetrow, J. S., Daniel, L. W., and King, S. B. (2007) Fluorescent and affinity-based tools to detect cysteine sulfenic acid formation in proteins. Bioconjug. Chem. 18, 2004-2017
-
(2007)
Bioconjug. Chem.
, vol.18
, pp. 2004-2017
-
-
Poole, L.B.1
Klomsiri, C.2
Knaggs, S.A.3
Furdui, C.M.4
Nelson, K.J.5
Thomas, M.J.6
Fetrow, J.S.7
Daniel, L.W.8
King, S.B.9
-
78
-
-
60549093028
-
Chemical dissection of an essential redox switch in yeast
-
Paulsen, C. E., and Carroll, K. S. (2009) Chemical dissection of an essential redox switch in yeast. Chem. Biol. 16, 217-225
-
(2009)
Chem. Biol.
, vol.16
, pp. 217-225
-
-
Paulsen, C.E.1
Carroll, K.S.2
-
79
-
-
43949085368
-
A chemical approach for detecting sulfenic acid-modified proteins in living cells
-
Reddie, K. G., Seo, Y. H., Muse Iii, W. B., Leonard, S. E., and Carroll, K. S. (2008) A chemical approach for detecting sulfenic acid-modified proteins in living cells. Mol. Biosyst. 4, 521-531
-
(2008)
Mol. Biosyst.
, vol.4
, pp. 521-531
-
-
Reddie, K.G.1
Seo, Y.H.2
Muse, W.B.3
Leonard, S.E.4
Carroll, K.S.5
-
80
-
-
84903198521
-
Mechanism of oxidant-induced mistranslation by threonyl-tRNA synthetase
-
Wu, J., Fan, Y., and Ling, J. (2014) Mechanism of oxidant-induced mistranslation by threonyl-tRNA synthetase. Nucleic Acids Res. 42, 6523-6531
-
(2014)
Nucleic Acids Res.
, vol.42
, pp. 6523-6531
-
-
Wu, J.1
Fan, Y.2
Ling, J.3
-
81
-
-
70349284540
-
Mining the thiol proteome for sulfenic acid modifications reveals new targets for oxidation in cells
-
Leonard, S. E., Reddie, K. G., and Carroll, K. S. (2009) Mining the thiol proteome for sulfenic acid modifications reveals new targets for oxidation in cells. ACS Chem. Biol. 4, 783-799
-
(2009)
ACS Chem. Biol.
, vol.4
, pp. 783-799
-
-
Leonard, S.E.1
Reddie, K.G.2
Carroll, K.S.3
-
82
-
-
84929657688
-
DYn-2 based identification of arabidopsis sulfenomes
-
Akter, S., Huang, J., Bodra, N., De Smet, B., Wahni, K., Rombaut, D., Pauwels, J., Gevaert, K., Carroll, K., Van Breusegem, F., and Messens, J. (2015) DYn-2 Based Identification of Arabidopsis Sulfenomes. Mol. Cell. Proteomics 14, 1183-1200
-
(2015)
Mol. Cell. Proteomics
, vol.14
, pp. 1183-1200
-
-
Akter, S.1
Huang, J.2
Bodra, N.3
De Smet, B.4
Wahni, K.5
Rombaut, D.6
Pauwels, J.7
Gevaert, K.8
Carroll, K.9
Van Breusegem, F.10
Messens, J.11
-
83
-
-
84907339922
-
Site-specific mapping and quantification of protein S-sulphenylation in cells
-
Yang, J., Gupta, V., Carroll, K. S., and Liebler, D. C. (2014) Site-specific mapping and quantification of protein S-sulphenylation in cells. Nat. Commun. 5, 4776
-
(2014)
Nat. Commun.
, vol.5
, pp. 4776
-
-
Yang, J.1
Gupta, V.2
Carroll, K.S.3
Liebler, D.C.4
-
84
-
-
84933037897
-
Global, in situ, site-specific analysis of protein S-sulfenylation
-
Yang, J., Gupta, V., Tallman, K. A., Porter, N. A., Carroll, K. S., and Liebler, D. C. (2015) Global, in situ, site-specific analysis of protein S-sulfenylation. Nat. Protoc. 10, 1022-1037
-
(2015)
Nat. Protoc.
, vol.10
, pp. 1022-1037
-
-
Yang, J.1
Gupta, V.2
Tallman, K.A.3
Porter, N.A.4
Carroll, K.S.5
Liebler, D.C.6
-
85
-
-
0242416188
-
ATP-dependent reduction of cysteine-sulphinic acid by S. Cerevisiae sulphiredoxin
-
Biteau, B., Labarre, J., and Toledano, M. B. (2003) ATP-dependent reduction of cysteine-sulphinic acid by S. Cerevisiae sulphiredoxin. Nature 425, 980-984
-
(2003)
Nature
, vol.425
, pp. 980-984
-
-
Biteau, B.1
Labarre, J.2
Toledano, M.B.3
-
86
-
-
0242668688
-
Reversing the inactivation of peroxiredoxins caused by cysteine sulfinic acid formation
-
Woo, H. A., Chae, H. Z., Hwang, S. C., Yang, K. S., Kang, S. W., Kim, K., and Rhee, S. G. (2003) Reversing the inactivation of peroxiredoxins caused by cysteine sulfinic acid formation. Science 300, 653-656
-
(2003)
Science
, vol.300
, pp. 653-656
-
-
Woo, H.A.1
Chae, H.Z.2
Hwang, S.C.3
Yang, K.S.4
Kang, S.W.5
Kim, K.6
Rhee, S.G.7
-
87
-
-
84862692522
-
Chemoselective ligation of sulfinic acids with aryl-nitroso compounds
-
Lo Conte, M., and Carroll, K. S. (2012) Chemoselective ligation of sulfinic acids with aryl-nitroso compounds. Angew. Chem. Int. Ed. Engl. 51, 6502-6505
-
(2012)
Angew. Chem. Int. Ed. Engl.
, vol.51
, pp. 6502-6505
-
-
Lo Conte, M.1
Carroll, K.S.2
-
88
-
-
84939801568
-
A chemical approach for the detection of protein sulfinylation
-
Lo Conte, M., Lin, J., Wilson, M. A., and Carroll, K. S. (2015) A Chemical Approach for the Detection of Protein Sulfinylation. ACS Chem. Biol. 10, 1825-1830
-
(2015)
ACS Chem. Biol.
, vol.10
, pp. 1825-1830
-
-
Lo Conte, M.1
Lin, J.2
Wilson, M.A.3
Carroll, K.S.4
-
89
-
-
74949103637
-
H2S signals through protein S-sulfhydration
-
Mustafa, A. K., Gadalla, M. M., Sen, N., Kim, S., Mu, W., Gazi, S. K., Barrow, R. K., Yang, G., Wang, R., and Snyder, S. H. (2009) H2S signals through protein S-sulfhydration. Sci. Signal. 2, ra72
-
(2009)
Sci. Signal.
, vol.2
, pp. ra72
-
-
Mustafa, A.K.1
Gadalla, M.M.2
Sen, N.3
Kim, S.4
Mu, W.5
Gazi, S.K.6
Barrow, R.K.7
Yang, G.8
Wang, R.9
Snyder, S.H.10
-
90
-
-
84879776406
-
Persulfide reactivity in the detection of protein s-sulfhydration
-
Pan, J., and Carroll, K. S. (2013) Persulfide reactivity in the detection of protein s-sulfhydration. ACS Chem. Biol. 8, 1110-1116
-
(2013)
ACS Chem. Biol.
, vol.8
, pp. 1110-1116
-
-
Pan, J.1
Carroll, K.S.2
-
91
-
-
84891792187
-
Detection of protein S-sulfhydration by a tag-switch technique
-
Zhang, D., Macinkovic, I., Devarie-Baez, N. O., Pan, J., Park, C. M., Carroll, K. S., Filipovic, M. R., and Xian, M. (2014) Detection of protein S-sulfhydration by a tag-switch technique. Angew Chem. Int. Ed. Engl. 53, 575-581
-
(2014)
Angew Chem. Int. Ed. Engl.
, vol.53
, pp. 575-581
-
-
Zhang, D.1
Macinkovic, I.2
Devarie-Baez, N.O.3
Pan, J.4
Park, C.M.5
Carroll, K.S.6
Filipovic, M.R.7
Xian, M.8
-
92
-
-
84924065039
-
Use of the "tag-switch" method for the detection of protein S-sulfhydration
-
Park, C. M., Macinkovic, I., Filipovic, M. R., and Xian, M. (2015) Use of the "tag-switch" method for the detection of protein S-sulfhydration. Methods Enzymol. 555, 39-56
-
(2015)
Methods Enzymol.
, vol.555
, pp. 39-56
-
-
Park, C.M.1
Macinkovic, I.2
Filipovic, M.R.3
Xian, M.4
-
93
-
-
84901659489
-
Reactive cysteine persulfides and S-polythiolation regulate oxidative stress and redox signaling
-
Ida, T., Sawa, T., Ihara, H., Tsuchiya, Y., Watanabe, Y., Kumagai, Y., Suematsu, M., Motohashi, H., Fujii, S., Matsunaga, T., Yamamoto, M., Ono, K., Devarie-Baez, N. O., Xian, M., Fukuto, J. M., and Akaike, T. (2014) Reactive cysteine persulfides and S-polythiolation regulate oxidative stress and redox signaling. Proc. Natl. Acad. Sci. U.S.A. 111, 7606-7611
-
(2014)
Proc. Natl. Acad. Sci. U.S.A.
, vol.111
, pp. 7606-7611
-
-
Ida, T.1
Sawa, T.2
Ihara, H.3
Tsuchiya, Y.4
Watanabe, Y.5
Kumagai, Y.6
Suematsu, M.7
Motohashi, H.8
Fujii, S.9
Matsunaga, T.10
Yamamoto, M.11
Ono, K.12
Devarie-Baez, N.O.13
Xian, M.14
Fukuto, J.M.15
Akaike, T.16
-
94
-
-
79251535315
-
Graphical analysis of pH-dependent properties of proteins predicted using PROPKA
-
Rostkowski, M., Olsson, M. H., Sondergaard, C. R., and Jensen, J. H. (2011) Graphical analysis of pH-dependent properties of proteins predicted using PROPKA. BMC Struct. Biol. 11, 6
-
(2011)
BMC Struct. Biol.
, vol.11
, pp. 6
-
-
Rostkowski, M.1
Olsson, M.H.2
Sondergaard, C.R.3
Jensen, J.H.4
-
95
-
-
68949213019
-
A generic method for assignment of reliability scores applied to solvent accessibility predictions
-
Petersen, B., Petersen, T. N., Andersen, P., Nielsen, M., and Lundegaard, C. (2009) A generic method for assignment of reliability scores applied to solvent accessibility predictions. BMC Struct. Biol. 9, 51
-
(2009)
BMC Struct. Biol.
, vol.9
, pp. 51
-
-
Petersen, B.1
Petersen, T.N.2
Andersen, P.3
Nielsen, M.4
Lundegaard, C.5
-
96
-
-
84856834259
-
Analysis and functional prediction of reactive cysteine residues
-
Marino, S. M., and Gladyshev, V. N. (2012) Analysis and functional prediction of reactive cysteine residues. J. Biol. Chem. 287, 4419-4425
-
(2012)
J. Biol. Chem.
, vol.287
, pp. 4419-4425
-
-
Marino, S.M.1
Gladyshev, V.N.2
-
97
-
-
61449172037
-
Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
-
Huang da, W., Sherman, B. T., and Lempicki, R. A. (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat. Protoc. 4, 44-57
-
(2009)
Nat. Protoc.
, vol.4
, pp. 44-57
-
-
Huang Da, W.1
Sherman, B.T.2
Lempicki, R.A.3
-
98
-
-
84879664516
-
NetGestalt: Integrating multidimensional omics data over biological networks
-
Shi, Z., Wang, J., and Zhang, B. (2013) NetGestalt: Integrating multidimensional omics data over biological networks. Nat. Methods 10, 597-598
-
(2013)
Nat. Methods
, vol.10
, pp. 597-598
-
-
Shi, Z.1
Wang, J.2
Zhang, B.3
-
99
-
-
84942323555
-
DbSNO 2.0: A resource for exploring structural environment, functional and disease association and regulatory network of protein S-nitrosylation
-
Chen, Y. J., Lu, C. T., Su, M. G., Huang, K. Y., Ching, W. C., Yang, H. H., Liao, Y. C., Chen, Y. J., and Lee, T. Y. (2015) dbSNO 2.0: A resource for exploring structural environment, functional and disease association and regulatory network of protein S-nitrosylation. Nucleic Acids Res. 43, D503-D511
-
(2015)
Nucleic Acids Res.
, vol.43
, pp. D503-D511
-
-
Chen, Y.J.1
Lu, C.T.2
Su, M.G.3
Huang, K.Y.4
Ching, W.C.5
Yang, H.H.6
Liao, Y.C.7
Chen, Y.J.8
Lee, T.Y.9
-
100
-
-
84867313408
-
RedoxDB-A curated database for experimentally verified protein oxidative modification
-
Sun, M. A., Wang, Y., Cheng, H., Zhang, Q., Ge, W., and Guo, D. (2012) RedoxDB-A curated database for experimentally verified protein oxidative modification. Bioinformatics 28, 2551-2552
-
(2012)
Bioinformatics
, vol.28
, pp. 2551-2552
-
-
Sun, M.A.1
Wang, Y.2
Cheng, H.3
Zhang, Q.4
Ge, W.5
Guo, D.6
|