-
1
-
-
21344446613
-
Effects of S-glutathionylation and S-nitrosylation on calmodulin binding to triads and FKBP12 binding to type 1 calcium release channels
-
Aracena P, Tang W, Hamilton SL, and Hidalgo C. Effects of S-glutathionylation and S-nitrosylation on calmodulin binding to triads and FKBP12 binding to type 1 calcium release channels. Antioxid Redox Signal 7: 870-881, 2005.
-
(2005)
Antioxid Redox Signal
, vol.7
, pp. 870-881
-
-
Aracena, P.1
Tang, W.2
Hamilton, S.L.3
Hidalgo, C.4
-
2
-
-
33846003833
-
Identification of cysteines involved in S-nitrosylation, S-glutathionylation, and oxidation to disulfides in ryanodine receptor type 1
-
Aracena-Parks P, Goonasekera SA, Gilman CP, Dirksen RT, Hidalgo C, and Hamilton SL. Identification of cysteines involved in S-nitrosylation, S-glutathionylation, and oxidation to disulfides in ryanodine receptor type 1. J Biol Chem 281: 40354-40368, 2006.
-
(2006)
J Biol Chem
, vol.281
, pp. 40354-40368
-
-
Aracena-Parks, P.1
Goonasekera, S.A.2
Gilman, C.P.3
Dirksen, R.T.4
Hidalgo, C.5
Hamilton, S.L.6
-
3
-
-
1142297598
-
New concepts in reactive oxygen species and cardiovascular reperfusion physiology
-
Becker LB. New concepts in reactive oxygen species and cardiovascular reperfusion physiology. Cardiovasc Res 61: 461-470, 2004.
-
(2004)
Cardiovasc Res
, vol.61
, pp. 461-470
-
-
Becker, L.B.1
-
4
-
-
33644669954
-
The utility of N, N-biotinyl glutathione disulfide in the study of protein S-glutathiolation
-
Brennan JP, Miller JI, Fuller W, Wait R, Begum S, Dunn MJ, and Eaton P. The utility of N, N-biotinyl glutathione disulfide in the study of protein S-glutathiolation. Mol Cell Proteomics 5: 215-225, 2006.
-
(2006)
Mol Cell Proteomics
, vol.5
, pp. 215-225
-
-
Brennan, J.P.1
Miller, J.I.2
Fuller, W.3
Wait, R.4
Begum, S.5
Dunn, M.J.6
Eaton, P.7
-
5
-
-
67049118923
-
Accurate and sensitive peptide identification with mascot percolator
-
Brosch M, Yu L, Hubbard T, and Choudhary J. Accurate and sensitive peptide identification with Mascot Percolator. J Proteome Res 8: 3176-3181, 2009.
-
(2009)
J Proteome Res
, vol.8
, pp. 3176-3181
-
-
Brosch, M.1
Yu, L.2
Hubbard, T.3
Choudhary, J.4
-
7
-
-
78650810596
-
S-glutathionylation uncouples eNOS and regulates its cellular and vascular function
-
Chen CA, Wang TY, Varadharaj S, Reyes LA, Hemann C, Talukder MA, Chen YR, Druhan LJ, and Zweier JL. S-glutathionylation uncouples eNOS and regulates its cellular and vascular function. Nature 468: 1115-1118, 2010.
-
(2010)
Nature
, vol.468
, pp. 1115-1118
-
-
Chen, C.A.1
Wang, T.Y.2
Varadharaj, S.3
Reyes, L.A.4
Hemann, C.5
Talukder, M.A.6
Chen, Y.R.7
Druhan, L.J.8
Zweier, J.L.9
-
8
-
-
58049200135
-
Cysteine S-nitrosylation protects protein-tyrosine phosphatase 1B against oxidation-induced permanent inactivation
-
Chen YY, Chu HM, Pan KT, Teng CH, Wang DL, Wang AH, Khoo KH, and Meng TC. Cysteine S-nitrosylation protects protein-tyrosine phosphatase 1B against oxidation-induced permanent inactivation. J Biol Chem 283: 35265-35272, 2008.
-
(2008)
J Biol Chem
, vol.283
, pp. 35265-35272
-
-
Chen, Y.Y.1
Chu, H.M.2
Pan, K.T.3
Teng, C.H.4
Wang, D.L.5
Wang, A.H.6
Khoo, K.H.7
Meng, T.C.8
-
9
-
-
84857518627
-
Biological sequence motif discovery using motif-x
-
Chapter 13, Unit 13
-
Chou MF and Schwartz D. Biological sequence motif discovery using motif-x. In: Curr Protoc Bioinformatics Chapter 13, Unit 13: 15-24, 2011.
-
(2011)
Curr Protoc Bioinformatics
, pp. 15-24
-
-
Chou, M.F.1
Schwartz, D.2
-
10
-
-
74849138649
-
Combining low-and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags
-
Dayon L, Pasquarello C, Hoogland C, Sanchez JC, and Scherl A. Combining low-and high-energy tandem mass spectra for optimized peptide quantification with isobaric tags. J Proteomics 73: 769-777, 2010.
-
(2010)
J Proteomics
, vol.73
, pp. 769-777
-
-
Dayon, L.1
Pasquarello, C.2
Hoogland, C.3
Sanchez, J.C.4
Scherl, A.5
-
11
-
-
78049288138
-
Structural profiling of endogenous S-nitrosocysteine residues reveals unique features that accommodate diverse mechanisms for protein S-nitrosylation
-
Doulias PT, Greene JL, Greco TM, Tenopoulou M, Seeholzer SH, Dunbrack RL, and Ischiropoulos H. Structural profiling of endogenous S-nitrosocysteine residues reveals unique features that accommodate diverse mechanisms for protein S-nitrosylation. Proc Natl Acad Sci U S A 107: 16958-16963, 2010.
-
(2010)
Proc Natl Acad Sci U S A
, vol.107
, pp. 16958-16963
-
-
Doulias, P.T.1
Greene, J.L.2
Greco, T.M.3
Tenopoulou, M.4
Seeholzer, S.H.5
Dunbrack, R.L.6
Ischiropoulos, H.7
-
12
-
-
84876902031
-
S-nitrosylation: Specificity, occupancy, and interaction with other posttranslational modifications
-
Evangelista AM, Kohr MJ, and Murphy E. S-nitrosylation: specificity, occupancy, and interaction with other posttranslational modifications. Antioxid Redox Signal 19: 1209-1219, 2013.
-
(2013)
Antioxid Redox Signal
, vol.19
, pp. 1209-1219
-
-
Evangelista, A.M.1
Kohr, M.J.2
Murphy, E.3
-
13
-
-
84889298610
-
Overview of protein glutathionylation
-
edited by Costa LG. et al, John Wiley & Sons, Inc., Chapter 6: Unit 6.10
-
Filipovska A and Murphy MP. Overview of protein glutathionylation. In: Current Protocols in Toxicology, edited by Costa LG. et al, John Wiley & Sons, Inc., Chapter 6: Unit 6.10., 2006.
-
(2006)
Current Protocols in Toxicology
-
-
Filipovska, A.1
Murphy, M.P.2
-
14
-
-
58049124883
-
Detection of protein S-nitrosylation with the biotin-switch technique
-
Forrester MT, Foster MW, Benhar M, and Stamler JS. Detection of protein S-nitrosylation with the biotin-switch technique. Free Radic Biol Med 46: 119-126, 2009.
-
(2009)
Free Radic Biol Med
, vol.46
, pp. 119-126
-
-
Forrester, M.T.1
Foster, M.W.2
Benhar, M.3
Stamler, J.S.4
-
15
-
-
70049083635
-
Protein S-nitrosylation in health and disease: A current perspective
-
Foster MW, Hess DT, and Stamler JS. Protein S-nitrosylation in health and disease: a current perspective. Trends Mol Med 15: 391-404, 2009.
-
(2009)
Trends Mol Med
, vol.15
, pp. 391-404
-
-
Foster, M.W.1
Hess, D.T.2
Stamler, J.S.3
-
16
-
-
18344390036
-
Identification by redox proteomics of glutathionylated proteins in oxidatively stressed human T lymphocytes
-
Fratelli M, Demol H, Puype M, Casagrande S, Eberini I, Salmona M, Bonetto V, Mengozzi M, Duffieux F, Miclet E, Bachi A, Vandekerckhove J, Gianazza E, and Ghezzi P. Identification by redox proteomics of glutathionylated proteins in oxidatively stressed human T lymphocytes. Proc Natl Acad Sci U S A 99: 3505-3510, 2002.
-
(2002)
Proc Natl Acad Sci U S A
, vol.99
, pp. 3505-3510
-
-
Fratelli, M.1
Demol, H.2
Puype, M.3
Casagrande, S.4
Eberini, I.5
Salmona, M.6
Bonetto, V.7
Mengozzi, M.8
Duffieux, F.9
Miclet, E.10
Bachi, A.11
Vandekerckhove, J.12
Gianazza, E.13
Ghezzi, P.14
-
17
-
-
33646146488
-
Redox proteomics: Identification and functional role of glutathionylated proteins
-
Fratelli M, Gianazza E, and Ghezzi P. Redox proteomics: identification and functional role of glutathionylated proteins. Expert Rev Proteomics 1: 365-376, 2004.
-
(2004)
Expert Rev Proteomics
, vol.1
, pp. 365-376
-
-
Fratelli, M.1
Gianazza, E.2
Ghezzi, P.3
-
18
-
-
65249182226
-
Methods for analysis of protein glutathionylation and their application to photosynthetic organisms
-
Gao XH, Bedhomme M, Veyel D, Zaffagnini M, and Lemaire SD. Methods for analysis of protein glutathionylation and their application to photosynthetic organisms. Mol Plant 2: 218-235, 2009.
-
(2009)
Mol Plant
, vol.2
, pp. 218-235
-
-
Gao, X.H.1
Bedhomme, M.2
Veyel, D.3
Zaffagnini, M.4
Lemaire, S.D.5
-
19
-
-
18844410338
-
S-nitrosation versus S-glutathionylation of protein sulfhydryl groups by S-nitrosoglutathione
-
Giustarini D, Milzani A, Aldini G, Carini M, Rossi R, and Dalle-Donne I. S-nitrosation versus S-glutathionylation of protein sulfhydryl groups by S-nitrosoglutathione. Antioxid Redox Signal 7: 930-939, 2005.
-
(2005)
Antioxid Redox Signal
, vol.7
, pp. 930-939
-
-
Giustarini, D.1
Milzani, A.2
Aldini, G.3
Carini, M.4
Rossi, R.5
Dalle-Donne, I.6
-
20
-
-
14044272119
-
S-glutathionylation: From redox regulation of protein functions to human diseases
-
Giustarini D, Rossi R, Milzani A, Colombo R, and Dalle-Donne I. S-glutathionylation: from redox regulation of protein functions to human diseases. J Cell Mol Med 8: 201-212, 2004.
-
(2004)
J Cell Mol Med
, vol.8
, pp. 201-212
-
-
Giustarini, D.1
Rossi, R.2
Milzani, A.3
Colombo, R.4
Dalle-Donne, I.5
-
21
-
-
36749068401
-
Performance characteristics of electron transfer dissociation mass spectrometry
-
Good DM, Wirtala M, McAlister GC, and Coon JJ. Performance characteristics of electron transfer dissociation mass spectrometry. Mol Cell Proteomics 6: 1942-1951, 2007.
-
(2007)
Mol Cell Proteomics
, vol.6
, pp. 1942-1951
-
-
Good, D.M.1
Wirtala, M.2
McAlister, G.C.3
Coon, J.J.4
-
22
-
-
0037155791
-
Basal and stimulated protein S-nitrosylation in multiple cell types and tissues
-
Gow AJ, Chen Q, Hess DT, Day BJ, Ischiropoulos H, and Stamler JS. Basal and stimulated protein S-nitrosylation in multiple cell types and tissues. J Biol Chem 277: 9637-9640, 2002.
-
(2002)
J Biol Chem
, vol.277
, pp. 9637-9640
-
-
Gow, A.J.1
Chen, Q.2
Hess, D.T.3
Day, B.J.4
Ischiropoulos, H.5
Stamler, J.S.6
-
23
-
-
75749101460
-
Phosphoproteomics for the masses
-
Grimsrud PA, Swaney DL, Wenger CD, Beauchene NA, and Coon JJ. Phosphoproteomics for the masses. ACS Chem Biol 5: 105-119, 2010.
-
(2010)
ACS Chem Biol
, vol.5
, pp. 105-119
-
-
Grimsrud, P.A.1
Swaney, D.L.2
Wenger, C.D.3
Beauchene, N.A.4
Coon, J.J.5
-
24
-
-
22144477159
-
S-nitrosylated GAPDH initiates apoptotic cell death by nuclear translocation following Siah1 binding
-
Hara MR, Agrawal N, Kim SF, Cascio MB, Fujimuro M, Ozeki Y, Takahashi M, Cheah JH, Tankou SK, Hester LD, Ferris CD, Hayward SD, Snyder SH, and Sawa A. S-nitrosylated GAPDH initiates apoptotic cell death by nuclear translocation following Siah1 binding. Nat Cell Biol 7: 665-674, 2005.
-
(2005)
Nat Cell Biol
, vol.7
, pp. 665-674
-
-
Hara, M.R.1
Agrawal, N.2
Kim, S.F.3
Cascio, M.B.4
Fujimuro, M.5
Ozeki, Y.6
Takahashi, M.7
Cheah, J.H.8
Tankou, S.K.9
Hester, L.D.10
Ferris, C.D.11
Hayward, S.D.12
Snyder, S.H.13
Sawa, A.14
-
25
-
-
0029020791
-
Ischemia induces early changes to cytoskeletal and contractile proteins in diseased human myocardium
-
Hein S, Scheffold T, and Schaper J. Ischemia induces early changes to cytoskeletal and contractile proteins in diseased human myocardium. J Thorac Cardiovasc Surg 110: 89-98, 1995.
-
(1995)
J Thorac Cardiovasc Surg
, vol.110
, pp. 89-98
-
-
Hein, S.1
Scheffold, T.2
Schaper, J.3
-
26
-
-
84859822386
-
Regulatory control or oxidative damage? Proteomic approaches to interrogate the role of cysteine oxidation status in biological processes
-
013037
-
Held JM and Gibson BW. Regulatory control or oxidative damage? Proteomic approaches to interrogate the role of cysteine oxidation status in biological processes. Mol Cell Proteomics 11: R111 013037, 2012.
-
(2012)
Mol Cell Proteomics
, vol.11
-
-
Held, J.M.1
Gibson, B.W.2
-
27
-
-
20444459841
-
Statistical characterization of the charge state and residue dependence of low-energy CID peptide dissociation patterns
-
Huang Y, Triscari JM, Tseng GC, Pasa-Tolic L, Lipton MS, Smith RD, and Wysocki VH. Statistical characterization of the charge state and residue dependence of low-energy CID peptide dissociation patterns. Anal Chem 77: 5800-5813, 2005.
-
(2005)
Anal Chem
, vol.77
, pp. 5800-5813
-
-
Huang, Y.1
Triscari, J.M.2
Tseng, G.C.3
Pasa-Tolic, L.4
Lipton, M.S.5
Smith, R.D.6
Wysocki, V.H.7
-
28
-
-
34548848245
-
Galectin-1 regulates neurogenesis in the subventricular zone and promotes functional recovery after stroke
-
Ishibashi S, Kuroiwa T, Sakaguchi M, Sun L, Kadoya T, Okano H, and Mizusawa H. Galectin-1 regulates neurogenesis in the subventricular zone and promotes functional recovery after stroke. Exp Neurol 207: 302-313, 2007.
-
(2007)
Exp Neurol
, vol.207
, pp. 302-313
-
-
Ishibashi, S.1
Kuroiwa, T.2
Sakaguchi, M.3
Sun, L.4
Kadoya, T.5
Okano, H.6
Mizusawa, H.7
-
29
-
-
0025161312
-
Disruption of microtubules as an early sign of irreversible ischemic injury. Immunohistochemical study of in situ canine hearts
-
Iwai K, Hori M, Kitabatake A, Kurihara H, Uchida K, Inoue M, and Kamada T. Disruption of microtubules as an early sign of irreversible ischemic injury. Immunohistochemical study of in situ canine hearts. Circ Res 67: 694-706, 1990.
-
(1990)
Circ Res
, vol.67
, pp. 694-706
-
-
Iwai, K.1
Hori, M.2
Kitabatake, A.3
Kurihara, H.4
Uchida, K.5
Inoue, M.6
Kamada, T.7
-
30
-
-
0035147435
-
Protein S-nitrosylation: A physiological signal for neuronal nitric oxide
-
Jaffrey SR, Erdjument-Bromage H, Ferris CD, Tempst P, and Snyder SH. Protein S-nitrosylation: a physiological signal for neuronal nitric oxide. Nat Cell Biol 3: 193-197, 2001.
-
(2001)
Nat Cell Biol
, vol.3
, pp. 193-197
-
-
Jaffrey, S.R.1
Erdjument-Bromage, H.2
Ferris, C.D.3
Tempst, P.4
Snyder, S.H.5
-
31
-
-
0035849715
-
The biotin switch method for the detection of S-nitrosylated proteins
-
Jaffrey SR and Snyder SH. The biotin switch method for the detection of S-nitrosylated proteins. Sci STKE 2001: p11, 2001.
-
(2001)
Sci STKE
, vol.2001
, pp. 11
-
-
Jaffrey, S.R.1
Snyder, S.H.2
-
32
-
-
0033080394
-
S-nitrosylation and S-glutathiolation of protein sulfhydryls by S-nitroso glutathione
-
Ji Y, Akerboom TP, Sies H, and Thomas JA. S-nitrosylation and S-glutathiolation of protein sulfhydryls by S-nitroso glutathione. Arch Biochem Biophys 362: 67-78, 1999.
-
(1999)
Arch Biochem Biophys
, vol.362
, pp. 67-78
-
-
Ji, Y.1
Akerboom, T.P.2
Sies, H.3
Thomas, J.A.4
-
33
-
-
79851512636
-
Mapping the cysteine proteome: Analysis of redox-sensing thiols
-
Jones DP and Go YM. Mapping the cysteine proteome: analysis of redox-sensing thiols. Curr Opin Chem Biol 15: 103-112, 2011.
-
(2011)
Curr Opin Chem Biol
, vol.15
, pp. 103-112
-
-
Jones, D.P.1
Go, Y.M.2
-
34
-
-
35748972060
-
Semi-supervised learning for peptide identification from shotgun proteomics datasets
-
Kall L, Canterbury JD, Weston J, Noble WS, and MacCoss MJ. Semi-supervised learning for peptide identification from shotgun proteomics datasets. Nat Methods 4: 923-925, 2007.
-
(2007)
Nat Methods
, vol.4
, pp. 923-925
-
-
Kall, L.1
Canterbury, J.D.2
Weston, J.3
Noble, W.S.4
MacCoss, M.J.5
-
35
-
-
0037013155
-
OxyR: A molecular code for redox-related signaling
-
Kim SO, Merchant K, Nudelman R, Beyer WF, Jr., Keng T, DeAngelo J, Hausladen A, and Stamler JS. OxyR: a molecular code for redox-related signaling. Cell 109: 383-396, 2002.
-
(2002)
Cell
, vol.109
, pp. 383-396
-
-
Kim, S.O.1
Merchant, K.2
Nudelman, R.3
Beyer Jr., W.F.4
Keng, T.5
Deangelo, J.6
Hausladen, A.7
Stamler, J.S.8
-
36
-
-
0033869092
-
Regulation of protein function by S-glutathiolation in response to oxidative and nitrosative stress
-
Klatt P and Lamas S. Regulation of protein function by S-glutathiolation in response to oxidative and nitrosative stress. Eur J Biochem 267: 4928-4944, 2000.
-
(2000)
Eur J Biochem
, vol.267
, pp. 4928-4944
-
-
Klatt, P.1
Lamas, S.2
-
37
-
-
84868703950
-
Measurement of S-nitrosylation occupancy in the myocardium with cysteine-reactive tandem mass tags: Short communication
-
Kohr MJ, Aponte A, Sun J, Gucek M, Steenbergen C, and Murphy E. Measurement of S-nitrosylation occupancy in the myocardium with cysteine-reactive tandem mass tags: short communication. Circ Res 111: 1308-1312, 2012.
-
(2012)
Circ Res
, vol.111
, pp. 1308-1312
-
-
Kohr, M.J.1
Aponte, A.2
Sun, J.3
Gucek, M.4
Steenbergen, C.5
Murphy, E.6
-
38
-
-
79952070504
-
Simultaneous measurement of protein oxidation and S-nitrosylation during preconditioning and ischemia/reperfusion injury with resin-assisted capture
-
Kohr MJ, Sun J, Aponte A, Wang G, Gucek M, Murphy E, and Steenbergen C. Simultaneous measurement of protein oxidation and S-nitrosylation during preconditioning and ischemia/reperfusion injury with resin-assisted capture. Circ Res 108: 418-426, 2011.
-
(2011)
Circ Res
, vol.108
, pp. 418-426
-
-
Kohr, M.J.1
Sun, J.2
Aponte, A.3
Wang, G.4
Gucek, M.5
Murphy, E.6
Steenbergen, C.7
-
39
-
-
0034209724
-
Modification of creatine kinase by S-nitrosothiols: S-nitrosation vs. S-thiolation
-
Konorev EA, Kalyanaraman B, and Hogg N. Modification of creatine kinase by S-nitrosothiols: S-nitrosation vs. S-thiolation. Free Radic Biol Med 28: 1671-1678, 2000.
-
(2000)
Free Radic Biol Med
, vol.28
, pp. 1671-1678
-
-
Konorev, E.A.1
Kalyanaraman, B.2
Hogg, N.3
-
40
-
-
78149284226
-
GAPDH mediates nitrosylation of nuclear proteins
-
Kornberg MD, Sen N, Hara MR, Juluri KR, Nguyen JV, Snowman AM, Law L, Hester LD, and Snyder SH. GAPDH mediates nitrosylation of nuclear proteins. Nat Cell Biol 12: 1094-1100, 2010.
-
(2010)
Nat Cell Biol
, vol.12
, pp. 1094-1100
-
-
Kornberg, M.D.1
Sen, N.2
Hara, M.R.3
Juluri, K.R.4
Nguyen, J.V.5
Snowman, A.M.6
Law, L.7
Hester, L.D.8
Snyder, S.H.9
-
41
-
-
77949400181
-
Comprehensive identification and modified-site mapping of S-nitrosylated targets in prostate epithelial cells
-
Lam YW, Yuan Y, Isaac J, Babu CV, Meller J, and Ho SM. Comprehensive identification and modified-site mapping of S-nitrosylated targets in prostate epithelial cells. PloS One 5: e9075, 2010.
-
(2010)
PloS One
, vol.5
-
-
Lam, Y.W.1
Yuan, Y.2
Isaac, J.3
Babu, C.V.4
Meller, J.5
Ho, S.M.6
-
42
-
-
46149125288
-
Quantifying changes in the thiol redox proteome upon oxidative stress in vivo
-
Leichert LI, Gehrke F, Gudiseva HV, Blackwell T, Ilbert M, Walker AK, Strahler JR, Andrews PC, and Jakob U. Quantifying changes in the thiol redox proteome upon oxidative stress in vivo. Proc Natl Acad Sci U S A 105: 8197-8202, 2008.
-
(2008)
Proc Natl Acad Sci U S A
, vol.105
, pp. 8197-8202
-
-
Leichert, L.I.1
Gehrke, F.2
Gudiseva, H.V.3
Blackwell, T.4
Ilbert, M.5
Walker, A.K.6
Strahler, J.R.7
Andrews, P.C.8
Jakob, U.9
-
43
-
-
79851510345
-
Chemical 'omics' approaches for understanding protein cysteine oxidation in biology
-
Leonard SE and Carroll KS. Chemical 'omics' approaches for understanding protein cysteine oxidation in biology. Curr Opin Chem Biol 15: 88-102, 2011.
-
(2011)
Curr Opin Chem Biol
, vol.15
, pp. 88-102
-
-
Leonard, S.E.1
Carroll, K.S.2
-
44
-
-
80052560779
-
Oxidative modifications of DAMPs suppress inflammation: The case for S100A8 and S100A9
-
Lim SY, Raftery MJ, and Geczy CL. Oxidative modifications of DAMPs suppress inflammation: the case for S100A8 and S100A9. Antioxid Redox Signal 15: 2235-2248, 2011.
-
(2011)
Antioxid Redox Signal
, vol.15
, pp. 2235-2248
-
-
Lim, S.Y.1
Raftery, M.J.2
Geczy, C.L.3
-
45
-
-
0036401454
-
Identification of S-glutathionylated cellular proteins during oxidative stress and constitutive metabolism by affinity purification and proteomic analysis
-
Lind C, Gerdes R, Hamnell Y, Schuppe-Koistinen I, von Lowenhielm HB, Holmgren A, and Cotgreave IA. Identification of S-glutathionylated cellular proteins during oxidative stress and constitutive metabolism by affinity purification and proteomic analysis. Arch Biochem Biophys 406: 229-240, 2002.
-
(2002)
Arch Biochem Biophys
, vol.406
, pp. 229-240
-
-
Lind, C.1
Gerdes, R.2
Hamnell, Y.3
Schuppe-Koistinen, I.4
Von Lowenhielm, H.B.5
Holmgren, A.6
Cotgreave, I.A.7
-
46
-
-
11144344931
-
Nitric oxide inhibits myocardial apoptosis by preventing caspase-3 activity via S-nitrosylation
-
Maejima Y, Adachi S, Morikawa K, Ito H, and Isobe M. Nitric oxide inhibits myocardial apoptosis by preventing caspase-3 activity via S-nitrosylation. J Mol Cell Cardiol 38: 163-174, 2005.
-
(2005)
J Mol Cell Cardiol
, vol.38
, pp. 163-174
-
-
Maejima, Y.1
Adachi, S.2
Morikawa, K.3
Ito, H.4
Isobe, M.5
-
47
-
-
84884780953
-
Specificity in S-nitrosylation: A short-range mechanism for NO signaling?
-
Martinez-Ruiz A, Araujo IM, Izquierdo-Alvarez A, Hernansanz-Agustin P, Lamas S, and Serrador JM. Specificity in S-nitrosylation: a short-range mechanism for NO signaling? Antioxid Redox Signal 19: 1220-1235, 2013.
-
(2013)
Antioxid Redox Signal
, vol.19
, pp. 1220-1235
-
-
Martinez-Ruiz, A.1
Araujo, I.M.2
Izquierdo-Alvarez, A.3
Hernansanz-Agustin, P.4
Lamas, S.5
Serrador, J.M.6
-
48
-
-
34250738347
-
Signalling by NO-induced protein S-nitrosylation and S-glutathionylation: Convergences and divergences
-
Martinez-Ruiz A and Lamas S. Signalling by NO-induced protein S-nitrosylation and S-glutathionylation: convergences and divergences. Cardiovasc Res 75: 220-228, 2007.
-
(2007)
Cardiovasc Res
, vol.75
, pp. 220-228
-
-
Martinez-Ruiz, A.1
Lamas, S.2
-
49
-
-
84856741245
-
Posttranslational modification of cysteine in redox signaling and oxidative stress: Focus on S-glutathionylation
-
Mieyal JJ and Chock PB. Posttranslational modification of cysteine in redox signaling and oxidative stress: focus on S-glutathionylation. Antioxid Redox Signal 16: 471-475, 2012.
-
(2012)
Antioxid Redox Signal
, vol.16
, pp. 471-475
-
-
Mieyal, J.J.1
Chock, P.B.2
-
50
-
-
0033515479
-
Nitric oxide-induced S-glutathionylation and inactivation of glyceraldehyde-3-phosphate dehydrogenase
-
Mohr S, Hallak H, de Boitte A, Lapetina EG, and Brune B. Nitric oxide-induced S-glutathionylation and inactivation of glyceraldehyde-3-phosphate dehydrogenase. J Biol Chem 274: 9427-9430, 1999.
-
(1999)
J Biol Chem
, vol.274
, pp. 9427-9430
-
-
Mohr, S.1
Hallak, H.2
De Boitte, A.3
Lapetina, E.G.4
Brune, B.5
-
51
-
-
84856945096
-
S-nitrosylation: A radical way to protect the heart
-
Murphy E, Kohr M, Sun J, Nguyen T, and Steenbergen C. S-nitrosylation: a radical way to protect the heart. J Mol Cell Cardiol 52: 568-577, 2012.
-
(2012)
J Mol Cell Cardiol
, vol.52
, pp. 568-577
-
-
Murphy, E.1
Kohr, M.2
Sun, J.3
Nguyen, T.4
Steenbergen, C.5
-
52
-
-
84856717563
-
Identification and quantification of S-nitrosylation by cysteine reactive tandem mass tag switch assay
-
013441
-
Murray CI, Uhrigshardt H, O'Meally RN, Cole RN, and Van Eyk JE. Identification and quantification of S-nitrosylation by cysteine reactive tandem mass tag switch assay. Mol Cell Proteomics 11: M111 013441, 2012.
-
(2012)
Mol Cell Proteomics
, vol.11
-
-
Murray, C.I.1
Uhrigshardt, H.2
O'Meally, R.N.3
Cole, R.N.4
Van Eyk, J.E.5
-
53
-
-
79551656099
-
Cardioprotective pathways during reperfusion: Focus on redox signaling and other modalities of cell signaling
-
Pagliaro P, Moro F, Tullio F, Perrelli MG, and Penna C. Cardioprotective pathways during reperfusion: focus on redox signaling and other modalities of cell signaling. Antioxid Redox Signal 14: 833-850, 2011.
-
(2011)
Antioxid Redox Signal
, vol.14
, pp. 833-850
-
-
Pagliaro, P.1
Moro, F.2
Tullio, F.3
Perrelli, M.G.4
Penna, C.5
-
54
-
-
84863758944
-
Profiling thiol redox proteome using isotope tagging mass spectrometry
-
Parker J, Zhu N, Zhu M, and Chen S. Profiling thiol redox proteome using isotope tagging mass spectrometry. J Vis Exp 61: e3766, 2012.
-
(2012)
J Vis Exp
, vol.61
-
-
Parker, J.1
Zhu, N.2
Zhu, M.3
Chen, S.4
-
55
-
-
75749123115
-
Orchestrating redox signaling networks through regulatory cysteine switches
-
Paulsen CE and Carroll KS. Orchestrating redox signaling networks through regulatory cysteine switches. ACS Chem Biol 5: 47-62, 2010.
-
(2010)
ACS Chem Biol
, vol.5
, pp. 47-62
-
-
Paulsen, C.E.1
Carroll, K.S.2
-
56
-
-
77955159809
-
Peptide labeling with isobaric tags yields higher identification rates using iTRAQ 4-plex compared to TMT 6-plex and iTRAQ 8-plex on LTQ Orbitrap
-
Pichler P, Kocher T, Holzmann J, Mazanek M, Taus T, Ammerer G, and Mechtler K. Peptide labeling with isobaric tags yields higher identification rates using iTRAQ 4-plex compared to TMT 6-plex and iTRAQ 8-plex on LTQ Orbitrap. Anal Chem 82: 6549-6558, 2010.
-
(2010)
Anal Chem
, vol.82
, pp. 6549-6558
-
-
Pichler, P.1
Kocher, T.2
Holzmann, J.3
Mazanek, M.4
Taus, T.5
Ammerer, G.6
Mechtler, K.7
-
57
-
-
0025893054
-
Reaction of xanthine oxidase-derived oxidants with lipid and protein of human plasma
-
Radi R, Bush KM, Cosgrove TP, and Freeman BA. Reaction of xanthine oxidase-derived oxidants with lipid and protein of human plasma. Arch Biochem Biophys 286: 117-125, 1991.
-
(1991)
Arch Biochem Biophys
, vol.286
, pp. 117-125
-
-
Radi, R.1
Bush, K.M.2
Cosgrove, T.P.3
Freeman, B.A.4
-
58
-
-
57549095616
-
Expanding the functional diversity of proteins through cysteine oxidation
-
Reddie KG and Carroll KS. Expanding the functional diversity of proteins through cysteine oxidation. Curr Opin Chem Biol 12: 746-754, 2008.
-
(2008)
Curr Opin Chem Biol
, vol.12
, pp. 746-754
-
-
Reddie, K.G.1
Carroll, K.S.2
-
59
-
-
80051631238
-
GProX, a userfriendly platform for bioinformatics analysis and visualization of quantitative proteomics data
-
007450
-
Rigbolt KT, Vanselow JT, and Blagoev B. GProX, a userfriendly platform for bioinformatics analysis and visualization of quantitative proteomics data. Mol Cell Proteomics 10: O110 007450, 2011.
-
(2011)
Mol Cell Proteomics
, vol.10
-
-
Rigbolt, K.T.1
Vanselow, J.T.2
Blagoev, B.3
-
60
-
-
11144221439
-
Widespread sulfenic acid formation in tissues in response to hydrogen peroxide
-
Saurin AT, Neubert H, Brennan JP, and Eaton P. Widespread sulfenic acid formation in tissues in response to hydrogen peroxide. Proc Natl Acad Sci U S A 101: 17982-17987, 2004.
-
(2004)
Proc Natl Acad Sci U S A
, vol.101
, pp. 17982-17987
-
-
Saurin, A.T.1
Neubert, H.2
Brennan, J.P.3
Eaton, P.4
-
61
-
-
79961175927
-
Improving the prediction of disulfide bonds in eukaryotes with machine learning methods and protein subcellular localization
-
Savojardo C, Fariselli P, Alhamdoosh M, Martelli PL, Pierleoni A, and Casadio R. Improving the prediction of disulfide bonds in eukaryotes with machine learning methods and protein subcellular localization. Bioinformatics 27: 2224-2230, 2011.
-
(2011)
Bioinformatics
, vol.27
, pp. 2224-2230
-
-
Savojardo, C.1
Fariselli, P.2
Alhamdoosh, M.3
Martelli, P.L.4
Pierleoni, A.5
Casadio, R.6
-
62
-
-
27944499451
-
An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets
-
Schwartz D and Gygi SP. An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets. Nat Biotechnol 23: 1391-1398, 2005.
-
(2005)
Nat Biotechnol
, vol.23
, pp. 1391-1398
-
-
Schwartz, D.1
Gygi, S.P.2
-
63
-
-
46649101876
-
Nitric oxide-induced nuclear GAPDH activates p300/CBP and mediates apoptosis
-
Sen N, Hara MR, Kornberg MD, Cascio MB, Bae BI, Shahani N, Thomas B, Dawson TM, Dawson VL, Snyder SH, and Sawa A. Nitric oxide-induced nuclear GAPDH activates p300/CBP and mediates apoptosis. Nat Cell Biol 10: 866-873, 2008.
-
(2008)
Nat Cell Biol
, vol.10
, pp. 866-873
-
-
Sen, N.1
Hara, M.R.2
Kornberg, M.D.3
Cascio, M.B.4
Bae, B.I.5
Shahani, N.6
Thomas, B.7
Dawson, T.M.8
Dawson, V.L.9
Snyder, S.H.10
Sawa, A.11
-
64
-
-
70349482669
-
Profiling protein thiol oxidation in tumor cells using sulfenic acid-specific antibodies
-
Seo YH and Carroll KS. Profiling protein thiol oxidation in tumor cells using sulfenic acid-specific antibodies. Proc Natl Acad Sci U S A 106: 16163-16168, 2009.
-
(2009)
Proc Natl Acad Sci U S A
, vol.106
, pp. 16163-16168
-
-
Seo, Y.H.1
Carroll, K.S.2
-
65
-
-
79551676040
-
Quantification of protein sulfenic acid modifications using isotope-coded dimedone and iododimedone
-
Seo YH and Carroll KS. Quantification of protein sulfenic acid modifications using isotope-coded dimedone and iododimedone. Angew Chem Int Ed Engl 50: 1342-1345, 2011.
-
(2011)
Angew Chem Int Ed Engl
, vol.50
, pp. 1342-1345
-
-
Seo, Y.H.1
Carroll, K.S.2
-
66
-
-
79851512689
-
The SNO-proteome: Causation and classifications
-
Seth D and Stamler JS. The SNO-proteome: causation and classifications. Curr Opin Chem Biol 15: 129-136, 2011.
-
(2011)
Curr Opin Chem Biol
, vol.15
, pp. 129-136
-
-
Seth, D.1
Stamler, J.S.2
-
67
-
-
2642576571
-
Isotope-coded affinity tag approach to identify and quantify oxidant-sensitive protein thiols
-
Sethuraman M, McComb ME, Heibeck T, Costello CE, and Cohen RA. Isotope-coded affinity tag approach to identify and quantify oxidant-sensitive protein thiols. Mol Cell Proteomics 3: 273-278, 2004.
-
(2004)
Mol Cell Proteomics
, vol.3
, pp. 273-278
-
-
Sethuraman, M.1
McComb, M.E.2
Heibeck, T.3
Costello, C.E.4
Cohen, R.A.5
-
68
-
-
67650345724
-
Improvements to the percolator algorithm for peptide identification from shotgun proteomics data sets
-
Spivak M, Weston J, Bottou L, Kall L, and Noble WS. Improvements to the percolator algorithm for peptide identification from shotgun proteomics data sets. J Proteome Res 8: 3737-3745, 2009.
-
(2009)
J Proteome Res
, vol.8
, pp. 3737-3745
-
-
Spivak, M.1
Weston, J.2
Bottou, L.3
Kall, L.4
Noble, W.S.5
-
69
-
-
36348964192
-
Preconditioning results in S-nitrosylation of proteins involved in regulation of mitochondrial energetics and calcium transport
-
Sun J, Morgan M, Shen RF, Steenbergen C, and Murphy E. Preconditioning results in S-nitrosylation of proteins involved in regulation of mitochondrial energetics and calcium transport. Circ Res 101: 1155-1163, 2007.
-
(2007)
Circ Res
, vol.101
, pp. 1155-1163
-
-
Sun, J.1
Morgan, M.2
Shen, R.F.3
Steenbergen, C.4
Murphy, E.5
-
70
-
-
56149086397
-
Decision treedriven tandem mass spectrometry for shotgun proteomics
-
Swaney DL, McAlister GC, and Coon JJ. Decision treedriven tandem mass spectrometry for shotgun proteomics. Nat Methods 5: 959-964, 2008.
-
(2008)
Nat Methods
, vol.5
, pp. 959-964
-
-
Swaney, D.L.1
McAlister, G.C.2
Coon, J.J.3
-
71
-
-
1842486832
-
Protein S-glutathiolation triggered by decomposed S-nitrosoglutathione
-
Tao L and English AM. Protein S-glutathiolation triggered by decomposed S-nitrosoglutathione. Biochemistry 43: 4028-4038, 2004.
-
(2004)
Biochemistry
, vol.43
, pp. 4028-4038
-
-
Tao, L.1
English, A.M.2
-
72
-
-
77953595441
-
Undesirable charge-enhancement of isobaric tagged phosphopeptides leads to reduced identification efficiency
-
Thingholm TE, Palmisano G, Kjeldsen F, and Larsen MR. Undesirable charge-enhancement of isobaric tagged phosphopeptides leads to reduced identification efficiency. J Proteome Res 9: 4045-4052, 2010.
-
(2010)
J Proteome Res
, vol.9
, pp. 4045-4052
-
-
Thingholm, T.E.1
Palmisano, G.2
Kjeldsen, F.3
Larsen, M.R.4
-
73
-
-
12444345515
-
Tandem mass tags: A novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS
-
Thompson A, Schafer J, Kuhn K, Kienle S, Schwarz J, Schmidt G, Neumann T, Johnstone R, Mohammed AK, and Hamon C. Tandem mass tags: a novel quantification strategy for comparative analysis of complex protein mixtures by MS/MS. Anal Chem 75: 1895-1904, 2003.
-
(2003)
Anal Chem
, vol.75
, pp. 1895-1904
-
-
Thompson, A.1
Schafer, J.2
Kuhn, K.3
Kienle, S.4
Schwarz, J.5
Schmidt, G.6
Neumann, T.7
Johnstone, R.8
Mohammed, A.K.9
Hamon, C.10
-
74
-
-
0022514861
-
Oxidation and chemical modification of lung beta-galactoside-specific lectin
-
Whitney PL, Powell JT, and Sanford GL. Oxidation and chemical modification of lung beta-galactoside-specific lectin. Biochem J 238: 683-689, 1986.
-
(1986)
Biochem J
, vol.238
, pp. 683-689
-
-
Whitney, P.L.1
Powell, J.T.2
Sanford, G.L.3
|