메뉴 건너뛰기




Volumn 5, Issue 4, 2010, Pages

ESNOQ, proteomic quantification of endogenous S-nitrosation

Author keywords

[No Author keywords available]

Indexed keywords

CYSTEINE; PROTEOME; S NITROSOTHIOL; GAMMA INTERFERON; LIPOPOLYSACCHARIDE; PROTEIN;

EID: 77956302110     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0010015     Document Type: Article
Times cited : (33)

References (24)
  • 2
    • 32244445145 scopus 로고    scopus 로고
    • SNOSID, a proteomic method for identification of cysteine S-nitrosylation sites in complex protein mixtures
    • Hao G, Derakhshan B, Shi L, Campagne F, Gross SS (2006) SNOSID, a proteomic method for identification of cysteine S-nitrosylation sites in complex protein mixtures. Proc Natl Acad Sci U S A 103: 1012-1017.
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 1012-1017
    • Hao, G.1    Derakhshan, B.2    Shi, L.3    Campagne, F.4    Gross, S.S.5
  • 4
    • 0036583926 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics
    • Ong SE, Blagoev B, Kratchmarova I, Kristensen DB, Steen H, et al. (2002) Stable isotope labeling by amino acids in cell culture, SILAC, as a simple and accurate approach to expression proteomics. Mol Cell Proteomics 1: 376-386.
    • (2002) Mol Cell Proteomics , vol.1 , pp. 376-386
    • Ong, S.E.1    Blagoev, B.2    Kratchmarova, I.3    Kristensen, D.B.4    Steen, H.5
  • 5
    • 42649132889 scopus 로고    scopus 로고
    • Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins
    • Graumann J, Hubner NC, Kim JB, Ko K, Moser M, et al. (2008) Stable isotope labeling by amino acids in cell culture (SILAC) and proteome quantitation of mouse embryonic stem cells to a depth of 5,111 proteins. Mol Cell Proteomics 7: 672-683.
    • (2008) Mol Cell Proteomics , vol.7 , pp. 672-683
    • Graumann, J.1    Hubner, N.C.2    Kim, J.B.3    Ko, K.4    Moser, M.5
  • 7
    • 34848911602 scopus 로고    scopus 로고
    • Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4
    • Vermeulen M, Mulder KW, Denissov S, Pijnappel WW, van Schaik FM, et al. (2007) Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4. Cell 131: 58-69.
    • (2007) Cell , vol.131 , pp. 58-69
    • Vermeulen, M.1    Mulder, K.W.2    Denissov, S.3    Pijnappel, W.W.4    van Schaik, F.M.5
  • 8
    • 18744375196 scopus 로고    scopus 로고
    • Identifying and quantifying in vivo methylation sites by heavy methyl SILAC
    • Ong SE, Mittler G, Mann M (2004) Identifying and quantifying in vivo methylation sites by heavy methyl SILAC. Nat Methods 1: 119-126.
    • (2004) Nat Methods , vol.1 , pp. 119-126
    • Ong, S.E.1    Mittler, G.2    Mann, M.3
  • 10
    • 63049091804 scopus 로고    scopus 로고
    • The phosphotyrosine interactome of the insulin receptor family and its substrates IRS-1 and IRS-2
    • Hanke S, Mann M (2008) The phosphotyrosine interactome of the insulin receptor family and its substrates IRS-1 and IRS-2. Mol Cell Proteomics 8(3): 519-34.
    • (2008) Mol Cell Proteomics , vol.8 , Issue.3 , pp. 519-534
    • Hanke, S.1    Mann, M.2
  • 11
    • 42649106845 scopus 로고    scopus 로고
    • Detergent-free biotin switch combined with liquid chromatography/tandem mass spectrometry in the analysis of S-nitrosylated proteins
    • Han P, Chen C (2008) Detergent-free biotin switch combined with liquid chromatography/tandem mass spectrometry in the analysis of S-nitrosylated proteins. Rapid Commun Mass Spectrom 22: 1137-1145.
    • (2008) Rapid Commun Mass Spectrom , vol.22 , pp. 1137-1145
    • Han, P.1    Chen, C.2
  • 12
    • 0028092958 scopus 로고
    • Nitric oxide synthases: Roles, tolls, and controls
    • Nathan C, Xie QW (1994) Nitric oxide synthases: roles, tolls, and controls. Cell 78: 915-918.
    • (1994) Cell , vol.78 , pp. 915-918
    • Nathan, C.1    Xie, Q.W.2
  • 13
    • 14644431701 scopus 로고    scopus 로고
    • Identification of Snitrosylated proteins in endotoxin-stimulated RAW264.7 murine macrophages
    • Gao C, Guo H, Wei J, Mi Z, Wai PY, et al. (2005) Identification of Snitrosylated proteins in endotoxin-stimulated RAW264.7 murine macrophages. Nitric Oxide 12: 121-126.
    • (2005) Nitric Oxide , vol.12 , pp. 121-126
    • Gao, C.1    Guo, H.2    Wei, J.3    Mi, Z.4    Wai, P.Y.5
  • 14
    • 0015545444 scopus 로고
    • The effect of glucocorticosteroids on the proliferation and kinetics of promonocytes and monocytes of the bone marrow
    • Thompson J, van FR (1973) The effect of glucocorticosteroids on the proliferation and kinetics of promonocytes and monocytes of the bone marrow. J Exp Med 137: 10-21.
    • (1973) J Exp Med , vol.137 , pp. 10-21
    • Thompson, J.1    Van, F.R.2
  • 15
    • 59149085480 scopus 로고    scopus 로고
    • Quantitative proteomics analysis of macrophage rafts reveals compartmentalized activationof the proteasome and of proteasome-mediated ERK activation in response to lipopolysaccharide
    • Dhungana S, Merrick BA, Tomer KB, Fessler MB (2009) Quantitative proteomics analysis of macrophage rafts reveals compartmentalized activationof the proteasome and of proteasome-mediated ERK activation in response to lipopolysaccharide. Mol Cell Proteomics 8: 201-213.
    • (2009) Mol Cell Proteomics , vol.8 , pp. 201-213
    • Dhungana, S.1    Merrick, B.A.2    Tomer, K.B.3    Fessler, M.B.4
  • 16
    • 0037108887 scopus 로고    scopus 로고
    • Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search
    • Keller A, Nesvizhskii AI, Kolker E, Aebersold R (2002) Empirical statistical model to estimate the accuracy of peptide identifications made by MS/MS and database search. Anal Chem 74: 5383-5392.
    • (2002) Anal Chem , vol.74 , pp. 5383-5392
    • Keller, A.1    Nesvizhskii, A.I.2    Kolker, E.3    Aebersold, R.4
  • 17
    • 0344737959 scopus 로고    scopus 로고
    • Automated statistical analysis of protein abundance ratios from data generated by stable-isotope dilution andtandem mass spectrometry
    • Li XJ, Zhang H, Ranish JA, Aebersold R (2003) Automated statistical analysis of protein abundance ratios from data generated by stable-isotope dilution andtandem mass spectrometry. Anal Chem 75: 6648-6657.
    • (2003) Anal Chem , vol.75 , pp. 6648-6657
    • Li, X.J.1    Zhang, H.2    Ranish, J.A.3    Aebersold, R.4
  • 19
    • 28644432877 scopus 로고    scopus 로고
    • Very fast empirical prediction andrationalization of protein pKa values
    • Li H, Robertson AD, Jensen JH (2005) Very fast empirical prediction andrationalization of protein pKa values. Proteins 61: 704-721.
    • (2005) Proteins , vol.61 , pp. 704-721
    • Li, H.1    Robertson, A.D.2    Jensen, J.H.3
  • 20
  • 21
    • 0343396326 scopus 로고    scopus 로고
    • The dual role of S-nitrosoglutathione (GSNO) during thymocyte apoptosis
    • Sandau K, Brune B (1996) The dual role of S-nitrosoglutathione (GSNO) during thymocyte apoptosis. Cell Signal 8: 173-177.
    • (1996) Cell Signal , vol.8 , pp. 173-177
    • Sandau, K.1    Brune, B.2
  • 22
    • 34548178909 scopus 로고    scopus 로고
    • In-gel digestion for mass spectrometric characterization of proteins and proteomes
    • Shevchenko A, Tomas H, Havlis J, Olsen JV, Mann M (2006) In-gel digestion for mass spectrometric characterization of proteins and proteomes. Nat Protoc 1: 2856-2860.
    • (2006) Nat Protoc , vol.1 , pp. 2856-2860
    • Shevchenko, A.1    Tomas, H.2    Havlis, J.3    Olsen, J.V.4    Mann, M.5
  • 23
    • 24044440971 scopus 로고    scopus 로고
    • BiNGO: A Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks
    • Maere S, Heymans K, Kuiper M (2005) BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks. Bioinformatics 21: 3448-3449.
    • (2005) Bioinformatics , vol.21 , pp. 3448-3449
    • Maere, S.1    Heymans, K.2    Kuiper, M.3
  • 24
    • 61449172037 scopus 로고    scopus 로고
    • Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources
    • Huang dW, Sherman BT, Lempicki RA (2009) Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources. Nat Protoc 4: 44-57.
    • (2009) Nat Protoc , vol.4 , pp. 44-57
    • Huang, D.W.1    Sherman, B.T.2    Lempicki, R.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.