Transcriptome-Wide Cleavage Site Mapping on Cellular mRNAs Reveals Features Underlying Sequence-Specific Cleavage by the Viral Ribonuclease SOX

PLoS Pathogens

Volumn 11, Issue 12, 2015, Pages

  Gaglia, Marta Maria ^a,b   Rycroft, Chris H ^c,d   Glaunsinger, Britt A ^e,f  

^a TUFTS UNIVERSITY   (United States)

^b TUFTS UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c HARVARD UNIVERSITY   (United States)

^d LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^e UNIVERSITY OF CALIFORNIA   (United States)

^f UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

COMPLEMENTARY DNA; GREEN FLUORESCENT PROTEIN; MESSENGER RNA; RIBONUCLEASE; SHORT HAIRPIN RNA; TRANSCRIPTOME; UNCLASSIFIED DRUG; VIRAL RIBONUCLEASE SOX; VIRUS PROTEIN;

ARTICLE; BIOINFORMATICS; CONTROLLED STUDY; DNA BINDING MOTIF; GENE EXPRESSION REGULATION; GENE LIBRARY; GENE MAPPING; GENE TARGETING; HEK293 CELL LINE; HIGH THROUGHPUT SEQUENCING; HUMAN; HUMAN CELL; HUMAN HERPESVIRUS 8; NORTHERN BLOTTING; PLASMID; POSTTRANSCRIPTIONAL GENE SILENCING; RNA CLEAVAGE; RNA PROCESSING; RNA SEQUENCE; SEQUENCE ALIGNMENT; SITE DIRECTED MUTAGENESIS; WESTERN BLOTTING; ENZYMOLOGY; GENE EXPRESSION PROFILING; HERPES VIRUS INFECTION; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYSIOLOGY;

BASE SEQUENCE; BLOTTING, WESTERN; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, VIRAL; HEK293 CELLS; HERPESVIRIDAE INFECTIONS; HERPESVIRUS 8, HUMAN; HUMANS; MOLECULAR SEQUENCE DATA; MUTAGENESIS, SITE-DIRECTED; RIBONUCLEASES; RNA, MESSENGER; TRANSCRIPTOME; VIRAL PROTEINS;

EID: 84953306450     PISSN: 15537366     EISSN: 15537374     Source Type: Journal    
DOI: 10.1371/journal.ppat.1005305     Document Type: Article

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