메뉴 건너뛰기




Volumn 38, Issue 6, 2010, Pages 781-788

Diverse Endonucleolytic Cleavage Sites in the Mammalian Transcriptome Depend upon MicroRNAs, Drosha, and Additional Nucleases

Author keywords

PROTEINS; RNA

Indexed keywords

DGCR8 PROTEIN, MOUSE; DROSHA PROTEIN, MOUSE; EIF2C2 PROTEIN, MOUSE; INITIATION FACTOR 2; MESSENGER RNA; MICRORNA; PROTEIN; RIBONUCLEASE; RIBONUCLEASE III;

EID: 77955492563     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2010.06.001     Document Type: Article
Times cited : (154)

References (33)
  • 1
    • 43449091567 scopus 로고    scopus 로고
    • Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome
    • Addo-Quaye, C., Eshoo, T.W., Bartel, D.P., Axtell, M.J., Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome. Curr. Biol. 18 (2008), 758–762.
    • (2008) Curr. Biol. , vol.18 , pp. 758-762
    • Addo-Quaye, C.1    Eshoo, T.W.2    Bartel, D.P.3    Axtell, M.J.4
  • 3
    • 67651149733 scopus 로고    scopus 로고
    • Identification of Apurinic/apyrimidinic endonuclease 1 (APE1) as the endoribonuclease that cleaves c-myc mRNA
    • Barnes, T., Kim, W.C., Mantha, A.K., Kim, S.E., Izumi, T., Mitra, S., Lee, C.H., Identification of Apurinic/apyrimidinic endonuclease 1 (APE1) as the endoribonuclease that cleaves c-myc mRNA. Nucleic Acids Res. 37 (2009), 3946–3958.
    • (2009) Nucleic Acids Res. , vol.37 , pp. 3946-3958
    • Barnes, T.1    Kim, W.C.2    Mantha, A.K.3    Kim, S.E.4    Izumi, T.5    Mitra, S.6    Lee, C.H.7
  • 5
    • 60149088848 scopus 로고    scopus 로고
    • Origins and Mechanisms of miRNAs and siRNAs
    • Carthew, R.W., Sontheimer, E.J., Origins and Mechanisms of miRNAs and siRNAs. Cell 136 (2009), 642–655.
    • (2009) Cell , vol.136 , pp. 642-655
    • Carthew, R.W.1    Sontheimer, E.J.2
  • 6
    • 77953183812 scopus 로고    scopus 로고
    • A dicer-independent miRNA biogenesis pathway that requires Ago catalysis
    • Published online April 27, 2010
    • Cheloufi, S., Dos Santos, C.O., Chong, M.M., Hannon, G.J., A dicer-independent miRNA biogenesis pathway that requires Ago catalysis. Nature., 2010, 10.1038/nature09092 Published online April 27, 2010.
    • (2010) Nature.
    • Cheloufi, S.1    Dos Santos, C.O.2    Chong, M.M.3    Hannon, G.J.4
  • 9
    • 0035803583 scopus 로고    scopus 로고
    • Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate
    • Elbashir, S.M., Martinez, J., Patkaniowska, A., Lendeckel, W., Tuschl, T., Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. EMBO J. 20 (2001), 6877–6888.
    • (2001) EMBO J. , vol.20 , pp. 6877-6888
    • Elbashir, S.M.1    Martinez, J.2    Patkaniowska, A.3    Lendeckel, W.4    Tuschl, T.5
  • 13
    • 33750490399 scopus 로고    scopus 로고
    • Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex
    • Glavan, F., Behm-Ansmant, I., Izaurralde, E., Conti, E., Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complex. EMBO J. 25 (2006), 5117–5125.
    • (2006) EMBO J. , vol.25 , pp. 5117-5125
    • Glavan, F.1    Behm-Ansmant, I.2    Izaurralde, E.3    Conti, E.4
  • 14
    • 3042602447 scopus 로고    scopus 로고
    • Kinetic analysis of the RNAi enzyme complex
    • Haley, B., Zamore, P.D., Kinetic analysis of the RNAi enzyme complex. Nat. Struct. Mol. Biol. 11 (2004), 599–606.
    • (2004) Nat. Struct. Mol. Biol. , vol.11 , pp. 599-606
    • Haley, B.1    Zamore, P.D.2
  • 15
    • 68049110633 scopus 로고    scopus 로고
    • IRE1alpha kinase activation modes control alternate endoribonuclease outputs to determine divergent cell fates
    • Han, D., Lerner, A.G., Vande Walle, L., Upton, J.P., Xu, W., Hagen, A., Backes, B.J., Oakes, S.A., Papa, F.R., IRE1alpha kinase activation modes control alternate endoribonuclease outputs to determine divergent cell fates. Cell 138 (2009), 562–575.
    • (2009) Cell , vol.138 , pp. 562-575
    • Han, D.1    Lerner, A.G.2    Vande Walle, L.3    Upton, J.P.4    Xu, W.5    Hagen, A.6    Backes, B.J.7    Oakes, S.A.8    Papa, F.R.9
  • 18
    • 57049126216 scopus 로고    scopus 로고
    • SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan
    • Huntzinger, E., Kashima, I., Fauser, M., Sauliere, J., Izaurralde, E., SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan. RNA 14 (2008), 2609–2617.
    • (2008) RNA , vol.14 , pp. 2609-2617
    • Huntzinger, E.1    Kashima, I.2    Fauser, M.3    Sauliere, J.4    Izaurralde, E.5
  • 20
    • 57749189164 scopus 로고    scopus 로고
    • Endonucleolytic RNA cleavage by a eukaryotic exosome
    • Lebreton, A., Tomecki, R., Dziembowski, A., Seraphin, B., Endonucleolytic RNA cleavage by a eukaryotic exosome. Nature 456 (2008), 993–996.
    • (2008) Nature , vol.456 , pp. 993-996
    • Lebreton, A.1    Tomecki, R.2    Dziembowski, A.3    Seraphin, B.4
  • 22
    • 2442495329 scopus 로고    scopus 로고
    • RISC is a 5′ phosphomonoester-producing RNA endonuclease
    • Martinez, J., Tuschl, T., RISC is a 5′ phosphomonoester-producing RNA endonuclease. Genes Dev. 18 (2004), 975–980.
    • (2004) Genes Dev. , vol.18 , pp. 975-980
    • Martinez, J.1    Tuschl, T.2
  • 23
    • 64649087770 scopus 로고    scopus 로고
    • Identification of a cytoplasmic complex that adds a cap onto 5′-monophosphate RNA
    • Otsuka, Y., Kedersha, N.L., Schoenberg, D.R., Identification of a cytoplasmic complex that adds a cap onto 5′-monophosphate RNA. Mol. Cell. Biol. 29 (2009), 2155–2167.
    • (2009) Mol. Cell. Biol. , vol.29 , pp. 2155-2167
    • Otsuka, Y.1    Kedersha, N.L.2    Schoenberg, D.R.3
  • 24
    • 2342626647 scopus 로고    scopus 로고
    • The RNA-induced silencing complex is a Mg2+-dependent endonuclease
    • Schwarz, D.S., Tomari, Y., Zamore, P.D., The RNA-induced silencing complex is a Mg2+-dependent endonuclease. Curr. Biol. 14 (2004), 787–791.
    • (2004) Curr. Biol. , vol.14 , pp. 787-791
    • Schwarz, D.S.1    Tomari, Y.2    Zamore, P.D.3
  • 26
    • 70349187028 scopus 로고    scopus 로고
    • Genomic analysis suggests that mRNA destabilization by the microprocessor is specialized for the auto-regulation of Dgcr8
    • Shenoy, A., Blelloch, R., Genomic analysis suggests that mRNA destabilization by the microprocessor is specialized for the auto-regulation of Dgcr8. PLoS ONE, 4, 2009, e6971, 10.1371/journal.pone.0006971.
    • (2009) PLoS ONE , vol.4 , pp. e6971
    • Shenoy, A.1    Blelloch, R.2
  • 27
    • 19444367079 scopus 로고    scopus 로고
    • Mammalian microRNAs derived from genomic repeats
    • Smalheiser, N.R., Torvik, V.I., Mammalian microRNAs derived from genomic repeats. Trends Genet. 21 (2005), 322–326.
    • (2005) Trends Genet. , vol.21 , pp. 322-326
    • Smalheiser, N.R.1    Torvik, V.I.2
  • 29
    • 0034775591 scopus 로고    scopus 로고
    • RasGAP-associated endoribonuclease G3Bp: selective RNA degradation and phosphorylation-dependent localization
    • Tourriere, H., Gallouzi, I.E., Chebli, K., Capony, J.P., Mouaikel, J., van der Geer, P., Tazi, J., RasGAP-associated endoribonuclease G3Bp: selective RNA degradation and phosphorylation-dependent localization. Mol. Cell. Biol. 21 (2001), 7747–7760.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 7747-7760
    • Tourriere, H.1    Gallouzi, I.E.2    Chebli, K.3    Capony, J.P.4    Mouaikel, J.5    van der Geer, P.6    Tazi, J.7
  • 30
    • 60149086351 scopus 로고    scopus 로고
    • Origin, biogenesis, and activity of plant microRNAs
    • Voinnet, O., Origin, biogenesis, and activity of plant microRNAs. Cell 136 (2009), 669–687.
    • (2009) Cell , vol.136 , pp. 669-687
    • Voinnet, O.1
  • 31
    • 0034677202 scopus 로고    scopus 로고
    • Identification of an erythroid-enriched endoribonuclease activity involved in specific mRNA cleavage
    • Wang, Z., Kiledjian, M., Identification of an erythroid-enriched endoribonuclease activity involved in specific mRNA cleavage. EMBO J. 19 (2000), 295–305.
    • (2000) EMBO J. , vol.19 , pp. 295-305
    • Wang, Z.1    Kiledjian, M.2
  • 32
    • 0033572893 scopus 로고    scopus 로고
    • No evidence that mRNAs have lower folding free energies than random sequences with the same dinucleotide distribution
    • Workman, C., Krogh, A., No evidence that mRNAs have lower folding free energies than random sequences with the same dinucleotide distribution. Nucleic Acids Res. 27 (1999), 4816–4822.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 4816-4822
    • Workman, C.1    Krogh, A.2
  • 33
    • 2142654329 scopus 로고    scopus 로고
    • MicroRNA-directed cleavage of HOXB8 mRNA
    • Yekta, S., Shih, I.H., Bartel, D.P., MicroRNA-directed cleavage of HOXB8 mRNA. Science 304 (2004), 594–596.
    • (2004) Science , vol.304 , pp. 594-596
    • Yekta, S.1    Shih, I.H.2    Bartel, D.P.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.