-
1
-
-
0032941343
-
Cancer risk in mutation carriers of DNA-mismatch-repair genes
-
COI: 1:STN:280:DyaK1M3gt1Kjtg%3D%3D, PID: 10188721
-
Aarnio M et al (1999) Cancer risk in mutation carriers of DNA-mismatch-repair genes. Int J Cancer 81:214–218. doi:10.1002/(SICI)1097-0215(19990412)81:2<214:AID-IJC8>3.0.CO;2-L
-
(1999)
Int J Cancer
, vol.81
, pp. 214-218
-
-
Aarnio, M.1
-
2
-
-
10344263901
-
Conformations of variably linked chimeric proteins evaluated by synchrotron X-ray small-angle scattering
-
COI: 1:CAS:528:DC%2BD2cXhtVaqtLnF, PID: 15390267
-
Arai R, Wriggers W, Nishikawa Y, Nagamune T, Fujisawa T (2004) Conformations of variably linked chimeric proteins evaluated by synchrotron X-ray small-angle scattering. Proteins 57:829–838
-
(2004)
Proteins
, vol.57
, pp. 829-838
-
-
Arai, R.1
Wriggers, W.2
Nishikawa, Y.3
Nagamune, T.4
Fujisawa, T.5
-
3
-
-
77949655846
-
Functional residues on the surface of the N-terminal domain of yeast Pms1
-
COI: 1:CAS:528:DC%2BC3cXjvFyqtrc%3D
-
Arana ME, Holmes SF, Fortune JM, Moon AF, Pedersen LC, Kunkel TA (2010) Functional residues on the surface of the N-terminal domain of yeast Pms1. DNA Repair (Amst) 9:448–457. doi:10.1016/j.dnarep.2010.01.010
-
(2010)
DNA Repair (Amst)
, vol.9
, pp. 448-457
-
-
Arana, M.E.1
Holmes, S.F.2
Fortune, J.M.3
Moon, A.F.4
Pedersen, L.C.5
Kunkel, T.A.6
-
4
-
-
0032514843
-
Crystal structure and ATPase activity of MutL: implications for DNA repair and mutagenesis
-
COI: 1:CAS:528:DyaK1cXns1ekt78%3D, PID: 9827806
-
Ban C, Yang W (1998a) Crystal structure and ATPase activity of MutL: implications for DNA repair and mutagenesis. Cell 95:541–552
-
(1998)
Cell
, vol.95
, pp. 541-552
-
-
Ban, C.1
Yang, W.2
-
5
-
-
0032473571
-
Structural basis for MutH activation in E. coli mismatch repair and relationship of MutH to restriction endonucleases
-
COI: 1:CAS:528:DyaK1cXitFynsro%3D, PID: 9482749
-
Ban C, Yang W (1998b) Structural basis for MutH activation in E. coli mismatch repair and relationship of MutH to restriction endonucleases. EMBO J 17:1526–1534
-
(1998)
EMBO J
, vol.17
, pp. 1526-1534
-
-
Ban, C.1
Yang, W.2
-
6
-
-
0033515522
-
Transformation of MutL by ATP binding and hydrolysis: a switch in DNA mismatch repair
-
COI: 1:CAS:528:DyaK1MXitlGmtL0%3D, PID: 10199405
-
Ban C, Junop M, Yang W (1999) Transformation of MutL by ATP binding and hydrolysis: a switch in DNA mismatch repair. Cell 97:85–97
-
(1999)
Cell
, vol.97
, pp. 85-97
-
-
Ban, C.1
Junop, M.2
Yang, W.3
-
7
-
-
0030987132
-
An atypical topoisomerase II from Archaea with implications for meiotic recombination
-
COI: 1:CAS:528:DyaK2sXit1WrtL8%3D, PID: 9121560
-
Bergerat A, de Massy B, Gadelle D, Varoutas PC, Nicolas A, Forterre P (1997) An atypical topoisomerase II from Archaea with implications for meiotic recombination. Nature 386:414–417. doi:10.1038/386414a0
-
(1997)
Nature
, vol.386
, pp. 414-417
-
-
Bergerat, A.1
de Massy, B.2
Gadelle, D.3
Varoutas, P.C.4
Nicolas, A.5
Forterre, P.6
-
8
-
-
80054769508
-
Some amino acids of the Pseudomonas aeruginosa MutL D(Q/M)HA(X)(2)E(X)(4)E conserved motif are essential for the in vivo function of the protein but not for the in vitro endonuclease activity
-
COI: 1:CAS:528:DC%2BC3MXhtlaqtbzI
-
Correa EM, Martina MA, De Tullio L, Argarana CE, Barra JL (2011) Some amino acids of the Pseudomonas aeruginosa MutL D(Q/M)HA(X)(2)E(X)(4)E conserved motif are essential for the in vivo function of the protein but not for the in vitro endonuclease activity. DNA Repair (Amst) 10:1106–1113. doi:10.1016/j.dnarep.2011.08.007
-
(2011)
DNA Repair (Amst)
, vol.10
, pp. 1106-1113
-
-
Correa, E.M.1
Martina, M.A.2
De Tullio, L.3
Argarana, C.E.4
Barra, J.L.5
-
9
-
-
0032568375
-
The complete genome of the hyperthermophilic bacterium Aquifex aeolicus
-
COI: 1:CAS:528:DyaK1cXit12qsL4%3D, PID: 9537320
-
Deckert G et al (1998) The complete genome of the hyperthermophilic bacterium Aquifex aeolicus. Nature 392:353–358. doi:10.1038/32831
-
(1998)
Nature
, vol.392
, pp. 353-358
-
-
Deckert, G.1
-
10
-
-
70350096549
-
The C-terminal domain is sufficient for endonuclease activity of Neisseria gonorrhoeae MutL
-
COI: 1:CAS:528:DC%2BD1MXhtF2lu77L, PID: 19656086
-
Duppatla V, Bodda C, Urbanke C, Friedhoff P, Rao DN (2009) The C-terminal domain is sufficient for endonuclease activity of Neisseria gonorrhoeae MutL. Biochem J 423:265–277
-
(2009)
Biochem J
, vol.423
, pp. 265-277
-
-
Duppatla, V.1
Bodda, C.2
Urbanke, C.3
Friedhoff, P.4
Rao, D.N.5
-
11
-
-
0033985080
-
GHKL, an emergent ATPase/kinase superfamily
-
COI: 1:CAS:528:DC%2BD3cXosVWktw%3D%3D, PID: 10637609
-
Dutta R, Inouye M (2000) GHKL, an emergent ATPase/kinase superfamily. Trends Biochem Sci 25:24–28
-
(2000)
Trends Biochem Sci
, vol.25
, pp. 24-28
-
-
Dutta, R.1
Inouye, M.2
-
12
-
-
3042841883
-
A defined human system that supports bidirectional mismatch-provoked excision
-
COI: 1:CAS:528:DC%2BD2cXlvFejurk%3D, PID: 15225546
-
Dzantiev L, Constantin N, Genschel J, Iyer RR, Burgers PM, Modrich P (2004) A defined human system that supports bidirectional mismatch-provoked excision. Mol Cell 15:31–41
-
(2004)
Mol Cell
, vol.15
, pp. 31-41
-
-
Dzantiev, L.1
Constantin, N.2
Genschel, J.3
Iyer, R.R.4
Burgers, P.M.5
Modrich, P.6
-
13
-
-
0029042130
-
Identification of mismatch repair genes and their role in the development of cancer
-
COI: 1:CAS:528:DyaK2MXmt1Sksr0%3D, PID: 7549435
-
Fishel R, Kolodner RD (1995) Identification of mismatch repair genes and their role in the development of cancer. Curr Opin Genet Dev 5:382–395
-
(1995)
Curr Opin Genet Dev
, vol.5
, pp. 382-395
-
-
Fishel, R.1
Kolodner, R.D.2
-
14
-
-
0027742295
-
The human mutator gene homolog MSH2 and its association with hereditary nonpolyposis colon cancer
-
COI: 1:CAS:528:DyaK2cXktVaitr8%3D, PID: 8252616
-
Fishel R et al (1993) The human mutator gene homolog MSH2 and its association with hereditary nonpolyposis colon cancer. Cell 75:1027–1038
-
(1993)
Cell
, vol.75
, pp. 1027-1038
-
-
Fishel, R.1
-
15
-
-
0004228157
-
-
American Society for Microbiology, Washington, DC:
-
Friedberg EC, Siede W, Walker GC, Wood RD, Schultz RA, Ellenberger T (2006) DNA repair and mutagenesis, 2nd edn. American Society for Microbiology, Washington, DC
-
(2006)
DNA repair and mutagenesis
-
-
Friedberg, E.C.1
Siede, W.2
Walker, G.C.3
Wood, R.D.4
Schultz, R.A.5
Ellenberger, T.6
-
16
-
-
0034512175
-
Small-angle X-ray scattering station at the SPring-8 RIKEN beamline
-
COI: 1:CAS:528:DC%2BD3cXkslOitb4%3D
-
Fujisawa T et al (2000) Small-angle X-ray scattering station at the SPring-8 RIKEN beamline. J Appl Cryst 33:797–800
-
(2000)
J Appl Cryst
, vol.33
, pp. 797-800
-
-
Fujisawa, T.1
-
17
-
-
79955739303
-
DNA mismatch repair in eukaryotes and bacteria
-
PID: 20725617
-
Fukui K (2010) DNA mismatch repair in eukaryotes and bacteria. J Nucleic Acids 2010:260512
-
(2010)
J Nucleic Acids
, vol.2010
, pp. 260512
-
-
Fukui, K.1
-
18
-
-
45549093251
-
Bound nucleotide controls the endonuclease activity of mismatch repair enzyme MutL
-
COI: 1:CAS:528:DC%2BD1cXltVyrtr0%3D, PID: 18310077
-
Fukui K, Nishida M, Nakagawa N, Masui R, Kuramitsu S (2008) Bound nucleotide controls the endonuclease activity of mismatch repair enzyme MutL. J Biol Chem 283:12136–12145
-
(2008)
J Biol Chem
, vol.283
, pp. 12136-12145
-
-
Fukui, K.1
Nishida, M.2
Nakagawa, N.3
Masui, R.4
Kuramitsu, S.5
-
19
-
-
84879957717
-
Biochemical properties of MutL, a DNA mismatch repair endonuclease
-
Storici F, (ed), Intech, Rijeka:
-
Fukui K, Shimada A, Iino H, Masui R, Kuramitsu S (2011) Biochemical properties of MutL, a DNA mismatch repair endonuclease. In: Storici F (ed) DNA repair—on the pathway to fixing DNA damage and errors. Intech, Rijeka, pp 123–142
-
(2011)
DNA repair—on the pathway to fixing DNA damage and errors
, pp. 123-142
-
-
Fukui, K.1
Shimada, A.2
Iino, H.3
Masui, R.4
Kuramitsu, S.5
-
20
-
-
0037066720
-
Human exonuclease I is required for 5′ and 3′ mismatch repair
-
COI: 1:CAS:528:DC%2BD38XivFSjtLs%3D, PID: 11809771
-
Genschel J, Bazemore LR, Modrich P (2002) Human exonuclease I is required for 5′ and 3′ mismatch repair. J Biol Chem 277:13302–13311
-
(2002)
J Biol Chem
, vol.277
, pp. 13302-13311
-
-
Genschel, J.1
Bazemore, L.R.2
Modrich, P.3
-
21
-
-
0035477839
-
Structure and function of the N-terminal 40 kDa fragment of human PMS2: a monomeric GHL ATPase
-
COI: 1:CAS:528:DC%2BD38XjtVWjug%3D%3D, PID: 11574484
-
Guarne A, Junop MS, Yang W (2001) Structure and function of the N-terminal 40 kDa fragment of human PMS2: a monomeric GHL ATPase. EMBO J 20:5521–5531
-
(2001)
EMBO J
, vol.20
, pp. 5521-5531
-
-
Guarne, A.1
Junop, M.S.2
Yang, W.3
-
22
-
-
9144274423
-
Structure of the MutL C-terminal domain: a model of intact MutL and its roles in mismatch repair
-
COI: 1:CAS:528:DC%2BD2cXovFals7g%3D, PID: 15470502
-
Guarne A, Ramon-Maiques S, Wolff EM, Ghirlando R, Hu X, Miller JH, Yang W (2004) Structure of the MutL C-terminal domain: a model of intact MutL and its roles in mismatch repair. EMBO J 23:4134–4145
-
(2004)
EMBO J
, vol.23
, pp. 4134-4145
-
-
Guarne, A.1
Ramon-Maiques, S.2
Wolff, E.M.3
Ghirlando, R.4
Hu, X.5
Miller, J.H.6
Yang, W.7
-
23
-
-
80155139783
-
Characterization of C- and N-terminal domains of Aquifex aeolicus MutL endonuclease: N-terminal domain stimulates the endonuclease activity of C-terminal domain in a zinc-dependent manner
-
COI: 1:CAS:528:DC%2BC3MXltFKjt74%3D
-
Iino H, Kim K, Shimada A, Masui R, Kuramitsu S, Fukui K (2011) Characterization of C- and N-terminal domains of Aquifex aeolicus MutL endonuclease: N-terminal domain stimulates the endonuclease activity of C-terminal domain in a zinc-dependent manner. Biosci Rep 31:309–322
-
(2011)
Biosci Rep
, vol.31
, pp. 309-322
-
-
Iino, H.1
Kim, K.2
Shimada, A.3
Masui, R.4
Kuramitsu, S.5
Fukui, K.6
-
24
-
-
33644626371
-
DNA mismatch repair: functions and mechanisms
-
COI: 1:CAS:528:DC%2BD2MXhtlChu7fN, PID: 16464007
-
Iyer RR, Pluciennik A, Burdett V, Modrich PL (2006) DNA mismatch repair: functions and mechanisms. Chem Rev 106:302–323
-
(2006)
Chem Rev
, vol.106
, pp. 302-323
-
-
Iyer, R.R.1
Pluciennik, A.2
Burdett, V.3
Modrich, P.L.4
-
25
-
-
0343674773
-
Mismatch repair defects in cancer
-
COI: 1:CAS:528:DC%2BD3cXisFWhsLc%3D, PID: 10753784, S0959-437X(00)00066-6 [pii]
-
Jiricny J, Nystrom-Lahti M (2000) Mismatch repair defects in cancer. Curr Opin Genet Dev 10:157–161 S0959-437X(00)00066-6 [pii]
-
(2000)
Curr Opin Genet Dev
, vol.10
, pp. 157-161
-
-
Jiricny, J.1
Nystrom-Lahti, M.2
-
26
-
-
33746189409
-
Endonucleolytic function of MutLα in human mismatch repair
-
COI: 1:CAS:528:DC%2BD28Xot1Ont7c%3D, PID: 16873062
-
Kadyrov FA, Dzantiev L, Constantin N, Modrich P (2006) Endonucleolytic function of MutLα in human mismatch repair. Cell 126:297–308
-
(2006)
Cell
, vol.126
, pp. 297-308
-
-
Kadyrov, F.A.1
Dzantiev, L.2
Constantin, N.3
Modrich, P.4
-
27
-
-
37549047646
-
Saccharomyces cerevisiae MutLα is a mismatch repair endonuclease
-
COI: 1:CAS:528:DC%2BD2sXhsVamurvK, PID: 17951253
-
Kadyrov FA, Holmes SF, Arana ME, Lukianova OA, O’Donnell M, Kunkel TA, Modrich P (2007) Saccharomyces cerevisiae MutLα is a mismatch repair endonuclease. J Biol Chem 282:37181–37190
-
(2007)
J Biol Chem
, vol.282
, pp. 37181-37190
-
-
Kadyrov, F.A.1
Holmes, S.F.2
Arana, M.E.3
Lukianova, O.A.4
O’Donnell, M.5
Kunkel, T.A.6
Modrich, P.7
-
28
-
-
58149193233
-
The SWISS-MODEL repository and associated resources
-
COI: 1:CAS:528:DC%2BD1cXhsFejtb7P, PID: 18931379
-
Kiefer F, Arnold K, Kunzli M, Bordoli L, Schwede T (2009) The SWISS-MODEL repository and associated resources. Nucleic Acids Res 37:D387–D392
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 387-392
-
-
Kiefer, F.1
Arnold, K.2
Kunzli, M.3
Bordoli, L.4
Schwede, T.5
-
29
-
-
59449089219
-
Structural insights of the nucleotide-dependent conformational changes of Thermotoga maritima MutL using small-angle X-ray scattering analysis
-
COI: 1:CAS:528:DC%2BD1MXhtVegt7o%3D, PID: 19029144
-
Kim TG, Cha HJ, Lee HJ, Heo SD, Choi KY, Ku JK, Ban C (2009) Structural insights of the nucleotide-dependent conformational changes of Thermotoga maritima MutL using small-angle X-ray scattering analysis. J Biochem 145:199–206
-
(2009)
J Biochem
, vol.145
, pp. 199-206
-
-
Kim, T.G.1
Cha, H.J.2
Lee, H.J.3
Heo, S.D.4
Choi, K.Y.5
Ku, J.K.6
Ban, C.7
-
30
-
-
0141484613
-
PRIMUS—a Windows-PC based system for small-angle scattering data analysis
-
COI: 1:CAS:528:DC%2BD3sXntV2mtL0%3D
-
Konarev PV, Volkov VV, Sokolova AV, Kock MHJ, Svergun DI (2003) PRIMUS—a Windows-PC based system for small-angle scattering data analysis. J Appl Cryst 36:1277–1282
-
(2003)
J Appl Cryst
, vol.36
, pp. 1277-1282
-
-
Konarev, P.V.1
Volkov, V.V.2
Sokolova, A.V.3
Kock, M.H.J.4
Svergun, D.I.5
-
31
-
-
0035124442
-
Automated matching of high- and low-resolution structural models
-
COI: 1:CAS:528:DC%2BD3MXlvV2ntg%3D%3D
-
Kozin MB, Svergun DI (2001) Automated matching of high- and low-resolution structural models. J Appl Cryst 34:33–41
-
(2001)
J Appl Cryst
, vol.34
, pp. 33-41
-
-
Kozin, M.B.1
Svergun, D.I.2
-
32
-
-
22244492665
-
DNA mismatch repair
-
COI: 1:CAS:528:DC%2BD2MXpsVensLY%3D, PID: 15952900
-
Kunkel TA, Erie DA (2005) DNA mismatch repair. Annu Rev Biochem 74:681–710
-
(2005)
Annu Rev Biochem
, vol.74
, pp. 681-710
-
-
Kunkel, T.A.1
Erie, D.A.2
-
33
-
-
0025366034
-
Pre-steady-state kinetics of Escherichia coli aspartate aminotransferase catalyzed reactions and thermodynamic aspects of its substrate specificity
-
COI: 1:CAS:528:DyaK3cXktVantbc%3D, PID: 2201406
-
Kuramitsu S, Hiromi K, Hayashi H, Morino Y, Kagamiyama H (1990) Pre-steady-state kinetics of Escherichia coli aspartate aminotransferase catalyzed reactions and thermodynamic aspects of its substrate specificity. Biochemistry 29:5469–5476
-
(1990)
Biochemistry
, vol.29
, pp. 5469-5476
-
-
Kuramitsu, S.1
Hiromi, K.2
Hayashi, H.3
Morino, Y.4
Kagamiyama, H.5
-
34
-
-
38049125557
-
Mechanisms and functions of DNA mismatch repair
-
COI: 1:CAS:528:DC%2BD1cXisVSjsA%3D%3D, PID: 18157157
-
Li GM (2008) Mechanisms and functions of DNA mismatch repair. Cell Res 18:85–98
-
(2008)
Cell Res
, vol.18
, pp. 85-98
-
-
Li, G.M.1
-
35
-
-
0022000759
-
Hereditary nonpolyposis colorectal cancer (Lynch syndromes I and II). II
-
COI: 1:STN:280:DyaL2M3lsVaqug%3D%3D
-
Lynch HT et al (1985) Hereditary nonpolyposis colorectal cancer (Lynch syndromes I and II). II. Biomarker Stud Cancer 56:939–951
-
(1985)
Biomarker Stud Cancer
, vol.56
, pp. 939-951
-
-
Lynch, H.T.1
-
36
-
-
0033593528
-
Monomer arrangement in HSP90 dimer as determined by decoration with N and C-terminal region specific antibodies
-
COI: 1:CAS:528:DyaK1MXhtVGjs78%3D, PID: 9887258
-
Maruya M, Sameshima M, Nemoto T, Yahara I (1999) Monomer arrangement in HSP90 dimer as determined by decoration with N and C-terminal region specific antibodies. J Mol Biol 285:903–907. doi:10.1006/jmbi.1998.2349
-
(1999)
J Mol Biol
, vol.285
, pp. 903-907
-
-
Maruya, M.1
Sameshima, M.2
Nemoto, T.3
Yahara, I.4
-
37
-
-
70349512044
-
Adenosine triphosphate stimulates Aquifex aeolicus MutL endonuclease activity
-
PID: 19777055
-
Mauris J, Evans TC (2009) Adenosine triphosphate stimulates Aquifex aeolicus MutL endonuclease activity. PLoS One 4:e7175
-
(2009)
PLoS One
, vol.4
, pp. 7175
-
-
Mauris, J.1
Evans, T.C.2
-
38
-
-
15644366959
-
Drastic genetic instability of tumors and normal tissues in Turcot syndrome
-
COI: 1:CAS:528:DyaK1cXmtVyl, PID: 9419979
-
Miyaki M et al (1997) Drastic genetic instability of tumors and normal tissues in Turcot syndrome. Oncogene 15:2877–2881. doi:10.1038/sj.onc.1201668
-
(1997)
Oncogene
, vol.15
, pp. 2877-2881
-
-
Miyaki, M.1
-
39
-
-
33750083332
-
Mechanisms in eukaryotic mismatch repair
-
COI: 1:CAS:528:DC%2BD28XhtVCrsL%2FO, PID: 16905530
-
Modrich P (2006) Mechanisms in eukaryotic mismatch repair. J Biol Chem 281:30305–30309
-
(2006)
J Biol Chem
, vol.281
, pp. 30305-30309
-
-
Modrich, P.1
-
40
-
-
0029943449
-
Mismatch repair in replication fidelity, genetic recombination, and cancer biology
-
COI: 1:CAS:528:DyaK28XktFamt7k%3D, PID: 8811176
-
Modrich P, Lahue R (1996) Mismatch repair in replication fidelity, genetic recombination, and cancer biology. Annu Rev Biochem 65:101–133
-
(1996)
Annu Rev Biochem
, vol.65
, pp. 101-133
-
-
Modrich, P.1
Lahue, R.2
-
41
-
-
80052203182
-
Molecular mechanisms of the whole DNA repair system: a comparison of bacterial and eukaryotic systems
-
PID: 20981145
-
Morita R et al (2010) Molecular mechanisms of the whole DNA repair system: a comparison of bacterial and eukaryotic systems. J Nucleic Acids 2010:179594
-
(2010)
J Nucleic Acids
, vol.2010
, pp. 179594
-
-
Morita, R.1
-
42
-
-
80052777569
-
Self-assembly of Escherichia coli MutL and its complexes with DNA
-
COI: 1:CAS:528:DC%2BC3MXhtVOktrbL, PID: 21793594
-
Niedziela-Majka A, Maluf NK, Antony E, Lohman TM (2011) Self-assembly of Escherichia coli MutL and its complexes with DNA. Biochemistry 50:7868–7880. doi:10.1021/bi200753b
-
(2011)
Biochemistry
, vol.50
, pp. 7868-7880
-
-
Niedziela-Majka, A.1
Maluf, N.K.2
Antony, E.3
Lohman, T.M.4
-
43
-
-
4444221565
-
UCSF Chimera—a visualization system for exploratory research and analysis
-
COI: 1:CAS:528:DC%2BD2cXmvVOhsbs%3D, PID: 15264254
-
Pettersen EF, Goddard TD, Huang CC, Couch GS, Greenblatt DM, Meng EC, Ferrin TE (2004) UCSF Chimera—a visualization system for exploratory research and analysis. J Comput Chem 25:1605–1612. doi:10.1002/jcc.20084
-
(2004)
J Comput Chem
, vol.25
, pp. 1605-1612
-
-
Pettersen, E.F.1
Goddard, T.D.2
Huang, C.C.3
Couch, G.S.4
Greenblatt, D.M.5
Meng, E.C.6
Ferrin, T.E.7
-
44
-
-
77954255964
-
Structure of the endonuclease domain of MutL: unlicensed to cut
-
COI: 1:CAS:528:DC%2BC3cXpsFejs78%3D, PID: 20603082
-
Pillon MC et al (2010) Structure of the endonuclease domain of MutL: unlicensed to cut. Mol Cell 39:145–151
-
(2010)
Mol Cell
, vol.39
, pp. 145-151
-
-
Pillon, M.C.1
-
45
-
-
78650419542
-
The endonuclease domain of MutL interacts with the β sliding clamp
-
COI: 1:CAS:528:DC%2BC3cXhs1ajtb%2FL
-
Pillon MC, Miller JH, Guarne A (2011) The endonuclease domain of MutL interacts with the β sliding clamp. DNA Repair (Amst) 10:87–93
-
(2011)
DNA Repair (Amst)
, vol.10
, pp. 87-93
-
-
Pillon, M.C.1
Miller, J.H.2
Guarne, A.3
-
46
-
-
77957979862
-
PCNA function in the activation and strand direction of MutLα endonuclease in mismatch repair
-
COI: 1:CAS:528:DC%2BC3cXhtF2jurzN, PID: 20713735
-
Pluciennik A, Dzantiev L, Iyer RR, Constantin N, Kadyrov FA, Modrich P (2010) PCNA function in the activation and strand direction of MutLα endonuclease in mismatch repair. Proc Natl Acad Sci USA 107:16066–16071
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 16066-16071
-
-
Pluciennik, A.1
Dzantiev, L.2
Iyer, R.R.3
Constantin, N.4
Kadyrov, F.A.5
Modrich, P.6
-
47
-
-
0031444238
-
Identification and structural characterization of the ATP/ADP-binding site in the Hsp90 molecular chaperone
-
COI: 1:CAS:528:DyaK2sXkslShtLc%3D, PID: 9230303, S0092-8674(00)80314-1 [pii]
-
Prodromou C, Roe SM, O’Brien R, Ladbury JE, Piper PW, Pearl LH (1997) Identification and structural characterization of the ATP/ADP-binding site in the Hsp90 molecular chaperone. Cell 90:65–75 S0092-8674(00)80314-1 [pii]
-
(1997)
Cell
, vol.90
, pp. 65-75
-
-
Prodromou, C.1
Roe, S.M.2
O’Brien, R.3
Ladbury, J.E.4
Piper, P.W.5
Pearl, L.H.6
-
48
-
-
0034663806
-
The ATPase cycle of Hsp90 drives a molecular ‘clamp’ via transient dimerization of the N-terminal domains
-
COI: 1:CAS:528:DC%2BD3cXnt1yrt74%3D, PID: 10944121
-
Prodromou C et al (2000) The ATPase cycle of Hsp90 drives a molecular ‘clamp’ via transient dimerization of the N-terminal domains. EMBO J 19:4383–4392. doi:10.1093/emboj/19.16.4383
-
(2000)
EMBO J
, vol.19
, pp. 4383-4392
-
-
Prodromou, C.1
-
49
-
-
0023901357
-
High salt activation of recA protein ATPase in the absence of DNA
-
COI: 1:CAS:528:DyaL1cXltFyksg%3D%3D, PID: 2826451
-
Pugh BF, Cox MM (1988) High salt activation of recA protein ATPase in the absence of DNA. J Biol Chem 263:76–83
-
(1988)
J Biol Chem
, vol.263
, pp. 76-83
-
-
Pugh, B.F.1
Cox, M.M.2
-
50
-
-
38149104520
-
Direct visualization of asymmetric adenine-nucleotide-induced conformational changes in MutLα
-
COI: 1:CAS:528:DC%2BD1cXhtlWjtLs%3D, PID: 18206974
-
Sacho EJ, Kadyrov FA, Modrich P, Kunkel TA, Erie DA (2008) Direct visualization of asymmetric adenine-nucleotide-induced conformational changes in MutLα. Mol Cell 29:112–121
-
(2008)
Mol Cell
, vol.29
, pp. 112-121
-
-
Sacho, E.J.1
Kadyrov, F.A.2
Modrich, P.3
Kunkel, T.A.4
Erie, D.A.5
-
51
-
-
0042622380
-
SWISS-MODEL: an automated protein homology-modeling server
-
COI: 1:CAS:528:DC%2BD3sXltVWjsLg%3D, PID: 12824332
-
Schwede T, Kopp J, Guex N, Peitsch MC (2003) SWISS-MODEL: an automated protein homology-modeling server. Nucleic Acids Res 31:3381–3385
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 3381-3385
-
-
Schwede, T.1
Kopp, J.2
Guex, N.3
Peitsch, M.C.4
-
52
-
-
0026910457
-
Determination of the regularization parameter in indirect-transform methods using perceptual criteria
-
Svergun DI (1992) Determination of the regularization parameter in indirect-transform methods using perceptual criteria. J Appl Crystallogr 25:495–503
-
(1992)
J Appl Crystallogr
, vol.25
, pp. 495-503
-
-
Svergun, D.I.1
-
53
-
-
0029185933
-
CRYSOL—a program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates
-
COI: 1:CAS:528:DyaK28XksFektg%3D%3D
-
Svergun D, Barberato C, Koch MHJ (1995) CRYSOL—a program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates. J Appl Cryst 28:768–773
-
(1995)
J Appl Cryst
, vol.28
, pp. 768-773
-
-
Svergun, D.1
Barberato, C.2
Koch, M.H.J.3
-
54
-
-
0035010533
-
Determination of domain structure of proteins from X-ray solution scattering
-
COI: 1:CAS:528:DC%2BD3MXkvFSqt7w%3D, PID: 11371467
-
Svergun DI, Petoukhov MV, Koch MH (2001) Determination of domain structure of proteins from X-ray solution scattering. Biophys J 80:2946–2953. doi:10.1016/S0006-3495(01)76260-1
-
(2001)
Biophys J
, vol.80
, pp. 2946-2953
-
-
Svergun, D.I.1
Petoukhov, M.V.2
Koch, M.H.3
-
55
-
-
80455141452
-
Small-angle X-ray scattering, synchrotron radiation, and the structure of bio- and nanosystems
-
COI: 1:CAS:528:DC%2BC3MXhtFyjsbbI
-
Svergun DI, Shtykova EV, Volkov VV, Feigin LA (2011) Small-angle X-ray scattering, synchrotron radiation, and the structure of bio- and nanosystems. Crystallogr Rep 56:725–750
-
(2011)
Crystallogr Rep
, vol.56
, pp. 725-750
-
-
Svergun, D.I.1
Shtykova, E.V.2
Volkov, V.V.3
Feigin, L.A.4
-
56
-
-
20444371377
-
Constantly updated knowledge of Hsp90
-
COI: 1:CAS:528:DC%2BD2MXlt1Ors7Y%3D, PID: 15858167
-
Terasawa K, Minami M, Minami Y (2005) Constantly updated knowledge of Hsp90. J Biochem 137:443–447. doi:10.1093/jb/mvi056
-
(2005)
J Biochem
, vol.137
, pp. 443-447
-
-
Terasawa, K.1
Minami, M.2
Minami, Y.3
-
57
-
-
0037701585
-
Uniqueness of ab initio shape determination in small-angle scattering
-
COI: 1:CAS:528:DC%2BD3sXjtVOgu7w%3D
-
Volkov VV, Svergun DI (2003) Uniqueness of ab initio shape determination in small-angle scattering. J Appl Cryst 36:860–864
-
(2003)
J Appl Cryst
, vol.36
, pp. 860-864
-
-
Volkov, V.V.1
Svergun, D.I.2
-
58
-
-
0026428621
-
Crystal structure of an N-terminal fragment of the DNA gyrase B protein
-
COI: 1:CAS:528:DyaK3MXltV2gs7o%3D, PID: 1646964
-
Wigley DB, Davies GJ, Dodson EJ, Maxwell A, Dodson G (1991) Crystal structure of an N-terminal fragment of the DNA gyrase B protein. Nature 351:624–629. doi:10.1038/351624a0
-
(1991)
Nature
, vol.351
, pp. 624-629
-
-
Wigley, D.B.1
Davies, G.J.2
Dodson, E.J.3
Maxwell, A.4
Dodson, G.5
-
59
-
-
0035783173
-
Using situs for flexible and rigid-body fitting of multiresolution single-molecule data
-
COI: 1:CAS:528:DC%2BD3MXlsVSjs78%3D, PID: 11472090
-
Wriggers W, Birmanns S (2001) Using situs for flexible and rigid-body fitting of multiresolution single-molecule data. J Struct Biol 133:193–202. doi:10.1006/jsbi.2000.4350
-
(2001)
J Struct Biol
, vol.133
, pp. 193-202
-
-
Wriggers, W.1
Birmanns, S.2
-
60
-
-
82755163144
-
Evidence for ATP-dependent structural rearrangement of nuclease catalytic site in DNA mismatch repair endonuclease MutL
-
COI: 1:CAS:528:DC%2BC3MXhsFKjsrrL, PID: 21953455
-
Yamamoto T, Iino H, Kim K, Kuramitsu S, Fukui K (2011) Evidence for ATP-dependent structural rearrangement of nuclease catalytic site in DNA mismatch repair endonuclease MutL. J Biol Chem 286:42337–42348. doi:10.1074/jbc.M111.277335
-
(2011)
J Biol Chem
, vol.286
, pp. 42337-42348
-
-
Yamamoto, T.1
Iino, H.2
Kim, K.3
Kuramitsu, S.4
Fukui, K.5
-
61
-
-
33845739875
-
Human MutLα: the jack of all trades in MMR is also an endonuclease
-
COI: 1:CAS:528:DC%2BD2sXhsFGksw%3D%3D
-
Yang W (2007) Human MutLα: the jack of all trades in MMR is also an endonuclease. DNA Repair (Amst) 6:135–139
-
(2007)
DNA Repair (Amst)
, vol.6
, pp. 135-139
-
-
Yang, W.1
-
62
-
-
0033762813
-
Structural genomics projects in Japan
-
COI: 1:CAS:528:DC%2BD3cXnvVOgt7s%3D, PID: 11103994
-
Yokoyama S et al (2000) Structural genomics projects in Japan. Nat Struct Biol 7(Suppl):943–945. doi:10.1038/80712
-
(2000)
Nat Struct Biol
, vol.7
, pp. 943-945
-
-
Yokoyama, S.1
-
63
-
-
24144447320
-
Reconstitution of 5′-directed human mismatch repair in a purified system
-
COI: 1:CAS:528:DC%2BD2MXhtVaqu73O, PID: 16143102
-
Zhang Y et al (2005) Reconstitution of 5′-directed human mismatch repair in a purified system. Cell 122:693–705. doi:10.1016/j.cell.2005.06.027
-
(2005)
Cell
, vol.122
, pp. 693-705
-
-
Zhang, Y.1
|