메뉴 건너뛰기




Volumn 10, Issue 6, 2015, Pages

Designing and testing of novel taxanes to probe the highly complex mechanisms by which taxanes bind to microtubules and cause cytotoxicity to cancer cells

Author keywords

[No Author keywords available]

Indexed keywords

BETA TUBULIN; DOCETAXEL; GLYCOPROTEIN; PACLITAXEL; TAXANE DERIVATIVE; MULTIDRUG RESISTANCE PROTEIN; TAXOID; TUBULIN;

EID: 84936851925     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0129168     Document Type: Article
Times cited : (13)

References (63)
  • 1
    • 0032495513 scopus 로고    scopus 로고
    • Structure of the alpha beta tubulin dimer by electron crystallography
    • PMID: 9428769
    • Nogales E, Wolf SG, Downing KH. Structure of the alpha beta tubulin dimer by electron crystallography. Nature. 1998; 391: 199-203. doi: 10.1038/34465 PMID: 9428769
    • (1998) Nature , vol.391 , pp. 199-203
    • Nogales, E.1    Wolf, S.G.2    Downing, K.H.3
  • 2
    • 65249157992 scopus 로고    scopus 로고
    • Identification and Characterization of an Intermediate Taxol Binding Site Within Microtubule Nanopores and a Mechanism for Tubulin Isotype Binding Selectivity
    • PMID: 19434843
    • Freedman H, Huzil JT, Luchko T, Ludueña RF, Tuszynski JA. Identification and Characterization of an Intermediate Taxol Binding Site Within Microtubule Nanopores and a Mechanism for Tubulin Isotype Binding Selectivity. J Chem Inf Model. 2009; 49: 424-436. doi: 10.1021/ci8003336 PMID: 19434843
    • (2009) J Chem Inf Model , vol.49 , pp. 424-436
    • Freedman, H.1    Huzil, J.T.2    Luchko, T.3    Ludueña, R.F.4    Tuszynski, J.A.5
  • 3
    • 77649191871 scopus 로고    scopus 로고
    • Microtubules and resistance to tubulin-binding agents
    • PMID: 20147901
    • Kavallaris M. Microtubules and resistance to tubulin-binding agents. Nat Rev Cancer. 2010; 10: 194-204. doi: 10.1038/nrc2803 PMID: 20147901
    • (2010) Nat Rev Cancer , vol.10 , pp. 194-204
    • Kavallaris, M.1
  • 4
    • 0030940117 scopus 로고    scopus 로고
    • Taxol differentially modulates the dynamics of microtubules assembled from unfractionated and purified beta-tubulin isotypes
    • PMID: 9132006
    • Derry WB, Wilson L, Khan IA, Luduena RF, Jordan MA. Taxol differentially modulates the dynamics of microtubules assembled from unfractionated and purified beta-tubulin isotypes. Biochemistry (Mosc). 1997; 36: 3554-3562. doi: 10.1021/bi962724m PMID: 9132006
    • (1997) Biochemistry (Mosc) , vol.36 , pp. 3554-3562
    • Derry, W.B.1    Wilson, L.2    Khan, I.A.3    Luduena, R.F.4    Jordan, M.A.5
  • 5
    • 84875198728 scopus 로고    scopus 로고
    • βIII-Tubulin: Biomarker of taxane resistance or drug target?
    • PMID: 23379899
    • Karki R, Mariani M, Andreoli M, He S, Scambia G, Shahabi S, et al. βIII-Tubulin: biomarker of taxane resistance or drug target? Expert Opin Ther Targets. 2013; 17: 461-472. doi: 10.1517/14728222.2013.766170 PMID: 23379899
    • (2013) Expert Opin Ther Targets , vol.17 , pp. 461-472
    • Karki, R.1    Mariani, M.2    Andreoli, M.3    He, S.4    Scambia, G.5    Shahabi, S.6
  • 6
    • 0037764082 scopus 로고    scopus 로고
    • Class III β-tubulin in human development and cancer
    • PMID: 12740870
    • Katsetos CD, Herman MM, Mörk SJ. Class III β-tubulin in human development and cancer. Cell Motil Cytoskeleton. 2003; 55: 77-96. doi: 10.1002/cm.10116 PMID: 12740870
    • (2003) Cell Motil Cytoskeleton , vol.55 , pp. 77-96
    • Katsetos, C.D.1    Herman, M.M.2    Mörk, S.J.3
  • 7
    • 0035397994 scopus 로고    scopus 로고
    • Randomized phase III trial of paclitaxel plus carboplatin versus vinorelbine plus cisplatin in the treatment of patients with advanced non-small-cell lung cancer: A Southwest Oncology Group trial
    • PMID: 11432888
    • Kelly K, Crowley J, Bunn PA, Presant CA, Grevstad PK, Moinpour CM, et al. Randomized phase III trial of paclitaxel plus carboplatin versus vinorelbine plus cisplatin in the treatment of patients with advanced non-small-cell lung cancer: A Southwest Oncology Group trial. J Clin Oncol. 2001; 19: 3210-3218. PMID: 11432888
    • (2001) J Clin Oncol , vol.19 , pp. 3210-3218
    • Kelly, K.1    Crowley, J.2    Bunn, P.A.3    Presant, C.A.4    Grevstad, P.K.5    Moinpour, C.M.6
  • 8
    • 2942590262 scopus 로고    scopus 로고
    • Taxane-platinum combinations in advanced non-small cell lung cancer: A review
    • PMID: 15163843
    • Rigas JR. Taxane-platinum combinations in advanced non-small cell lung cancer: a review. The Oncologist. 2004; 9: 16-23. doi: 10.1634/theoncologist.9-suppl-2-16 PMID: 15163843
    • (2004) The Oncologist , vol.9 , pp. 16-23
    • Rigas, J.R.1
  • 9
    • 0031936939 scopus 로고    scopus 로고
    • Levels of multidrug resistance (MDR1) P-glycoprotein expression by human breast cancer correlate with in vitro resistance to taxol and doxorubicin
    • Mechetner E, Kyshtoobayeva A, Zonis S, Kim H, Stroup R, Garcia R, et al. Levels of multidrug resistance (MDR1) P-glycoprotein expression by human breast cancer correlate with in vitro resistance to taxol and doxorubicin. Clin Cancer Res Off J Am Assoc Cancer Res. 1998; 4: 389-398.
    • (1998) Clin Cancer Res Off J Am Assoc Cancer Res , vol.4 , pp. 389-398
    • Mechetner, E.1    Kyshtoobayeva, A.2    Zonis, S.3    Kim, H.4    Stroup, R.5    Garcia, R.6
  • 10
    • 1642579644 scopus 로고    scopus 로고
    • The betaII isotype of tubulin is present in the cell nuclei of a variety of cancers
    • PMID: 14691949
    • Yeh I-T, Ludueña RF. The betaII isotype of tubulin is present in the cell nuclei of a variety of cancers. Cell Motil Cytoskeleton. 2004; 57: 96-106. doi: 10.1002/cm.10157 PMID: 14691949
    • (2004) Cell Motil Cytoskeleton , vol.57 , pp. 96-106
    • Yeh, I.-T.1    Ludueña, R.F.2
  • 11
    • 75649117065 scopus 로고    scopus 로고
    • Cyclostreptin and microtubules: Is a low-affinity binding site required?
    • PMID: 19946930
    • Prussia AJ, Yang Y, Geballe MT, Snyder JP. Cyclostreptin and microtubules: is a low-affinity binding site required? ChemBioChem. 2010; 11: 101-109. doi: 10.1002/cbic.200900538 PMID: 19946930
    • (2010) ChemBioChem , vol.11 , pp. 101-109
    • Prussia, A.J.1    Yang, Y.2    Geballe, M.T.3    Snyder, J.P.4
  • 12
    • 0033034008 scopus 로고    scopus 로고
    • Clinical pharmacokinetics of docetaxel
    • PMID: 10092957
    • Clarke DSJ, Rivory LP. Clinical pharmacokinetics of docetaxel. Clin Pharmacokinet. 1999; 36: 99-114. doi: 10.2165/00003088-199936020-00002 PMID: 10092957
    • (1999) Clin Pharmacokinet , vol.36 , pp. 99-114
    • Clarke, D.S.J.1    Rivory, L.P.2
  • 13
    • 84872288933 scopus 로고    scopus 로고
    • Update on taxane development: New analogs and new formulations
    • PMID: 23251087
    • Tkaczuk K, Yared J. Update on taxane development: new analogs and new formulations. Drug Des Devel Ther. 2012; 6: 371-384. doi: 10.2147/DDDT.S28997 PMID: 23251087
    • (2012) Drug Des Devel Ther , vol.6 , pp. 371-384
    • Tkaczuk, K.1    Yared, J.2
  • 14
    • 84863012602 scopus 로고    scopus 로고
    • Taxanes: Promising anti-cancer drugs
    • PMID: 21790213
    • Fauzee NJS. Taxanes: promising anti-cancer drugs. Asian Pac J Cancer Prev APJCP. 2011; 12: 837-851. PMID: 21790213
    • (2011) Asian Pac J Cancer Prev APJCP , vol.12 , pp. 837-851
    • Fauzee, N.J.S.1
  • 15
    • 0033621479 scopus 로고    scopus 로고
    • Characterization of the Taxol binding site on the microtubule. Identification of Arg(282) in β-tubulin as the site of photoincorporation of a 7-benzophenone analogue of Taxol
    • PMID: 10608867
    • Rao S, He L, Chakravarty S, Ojima I, Orr GA, Horwitz SB. Characterization of the Taxol binding site on the microtubule. Identification of Arg(282) in β-tubulin as the site of photoincorporation of a 7-benzophenone analogue of Taxol. J Biol Chem. 1999; 274: 37990-37994. doi: 10.1074/jbc.274.53.37990 PMID: 10608867
    • (1999) J Biol Chem , vol.274 , pp. 37990-37994
    • Rao, S.1    He, L.2    Chakravarty, S.3    Ojima, I.4    Orr, G.A.5    Horwitz, S.B.6
  • 16
    • 0035942226 scopus 로고    scopus 로고
    • The binding conformation of Taxol in β-tubulin: A model based on electron crystallographic density
    • PMID: 11309480
    • Snyder JP, Nettles JH, Cornett B, Downing KH, Nogales E. The binding conformation of Taxol in β-tubulin: a model based on electron crystallographic density. Proc Natl Acad Sci. 2001; 98: 5312-5316. doi: 10.1073/pnas.051309398 PMID: 11309480
    • (2001) Proc Natl Acad Sci , vol.98 , pp. 5312-5316
    • Snyder, J.P.1    Nettles, J.H.2    Cornett, B.3    Downing, K.H.4    Nogales, E.5
  • 17
    • 33846374429 scopus 로고    scopus 로고
    • Cyclostreptin binds covalently to microtubule pores and lumenal taxoid binding sites
    • PMID: 17206139
    • Buey RM, Calvo E, Barasoain I, Pineda O, Edler MC, Matesanz R, et al. Cyclostreptin binds covalently to microtubule pores and lumenal taxoid binding sites. Nat Chem Biol. 2007; 3: 117-125. doi: 10.1038/nchembio853 PMID: 17206139
    • (2007) Nat Chem Biol , vol.3 , pp. 117-125
    • Buey, R.M.1    Calvo, E.2    Barasoain, I.3    Pineda, O.4    Edler, M.C.5    Matesanz, R.6
  • 18
    • 1942438028 scopus 로고    scopus 로고
    • Microtubules as a target for anticancer drugs
    • PMID: 15057285
    • Jordan MA, Wilson L. Microtubules as a target for anticancer drugs. Nat Rev Cancer. 2004; 4: 253-265. doi: 10.1038/nrc1317 PMID: 15057285
    • (2004) Nat Rev Cancer , vol.4 , pp. 253-265
    • Jordan, M.A.1    Wilson, L.2
  • 19
    • 0028908695 scopus 로고
    • Substoichiometric binding of Taxol suppresses microtubule dynamics
    • Derry WB, Wilson L, Jordan MA. Substoichiometric binding of Taxol suppresses microtubule dynamics. Biochemistry (Mosc). 1995; 34: 2203-2211. doi: 10.1021/bi00007a014
    • (1995) Biochemistry (Mosc) , vol.34 , pp. 2203-2211
    • Derry, W.B.1    Wilson, L.2    Jordan, M.A.3
  • 20
    • 31944439260 scopus 로고    scopus 로고
    • Comparative modelling of human β tubulin isotypes and implications for drug binding
    • PMID: 21727360
    • Huzil JT, Ludueña RF, Tuszynski J. Comparative modelling of human β tubulin isotypes and implications for drug binding. Nanotechnology. 2006; 17: S90. doi: 10.1088/0957-4484/17/4/014 PMID: 21727360
    • (2006) Nanotechnology , vol.17 , pp. S90
    • Huzil, J.T.1    Ludueña, R.F.2    Tuszynski, J.3
  • 23
    • 0016287342 scopus 로고
    • Breast tumor cell lines from pleural effusions
    • PMID: 4412247
    • Cailleau R, Young R, Olivé M, Reeves WJ. Breast tumor cell lines from pleural effusions. J Natl Cancer Inst. 1974; 53: 661-674. PMID: 4412247
    • (1974) J Natl Cancer Inst , vol.53 , pp. 661-674
    • Cailleau, R.1    Young, R.2    Olivé, M.3    Reeves, W.J.4
  • 24
    • 0018764332 scopus 로고
    • Establishment and characterization of a cell line of human breast carcinoma origin
    • PMID: 228940
    • Keydar I, Chen L, Karby S, Weiss FR, Delarea J, Radu M, et al. Establishment and characterization of a cell line of human breast carcinoma origin. Eur J Cancer. 1979; 15: 659-670. PMID: 228940
    • (1979) Eur J Cancer , vol.15 , pp. 659-670
    • Keydar, I.1    Chen, L.2    Karby, S.3    Weiss, F.R.4    Delarea, J.5    Radu, M.6
  • 25
    • 77957560607 scopus 로고    scopus 로고
    • The BH3-only protein Bad confers breast cancer taxane sensitivity through a nonapoptotic mechanism
    • PMID: 20603619
    • Craik AC, Veldhoen RA, Czernick M, Buckland TW, Kyselytzia K, Ghosh S, et al. The BH3-only protein Bad confers breast cancer taxane sensitivity through a nonapoptotic mechanism. Oncogene. 2010; 29: 5381-5391. doi: 10.1038/onc.2010.272 PMID: 20603619
    • (2010) Oncogene , vol.29 , pp. 5381-5391
    • Craik, A.C.1    Veldhoen, R.A.2    Czernick, M.3    Buckland, T.W.4    Kyselytzia, K.5    Ghosh, S.6
  • 26
    • 84928773752 scopus 로고    scopus 로고
    • Is the differentiation into molecular subtypes of breast cancer important for staging, local and systemic therapy, and follow up?
    • PMID: 25151406
    • Sonnenblick A, Fumagalli D, Sotiriou C, Piccart M. Is the differentiation into molecular subtypes of breast cancer important for staging, local and systemic therapy, and follow up? Cancer Treat Rev. 2014; 40: 1089-1095. doi: 10.1016/j.ctrv.2014.07.005 PMID: 25151406
    • (2014) Cancer Treat Rev , vol.40 , pp. 1089-1095
    • Sonnenblick, A.1    Fumagalli, D.2    Sotiriou, C.3    Piccart, M.4
  • 27
    • 0020559955 scopus 로고
    • Development and characterization of a human sarcoma cell line, MES-SA, sensitive to multiple drugs
    • PMID: 6883344
    • Harker WG, MacKintosh FR, Sikic BI. Development and characterization of a human sarcoma cell line, MES-SA, sensitive to multiple drugs. Cancer Res. 1983; 43: 4943-4950. PMID: 6883344
    • (1983) Cancer Res , vol.43 , pp. 4943-4950
    • Harker, W.G.1    MacKintosh, F.R.2    Sikic, B.I.3
  • 28
    • 0022352607 scopus 로고
    • Multidrug (pleiotropic) resistance in doxorubicin-selected variants of the human sarcoma cell line MES-SA
    • PMID: 4028002
    • Harker WG, Sikic BI. Multidrug (pleiotropic) resistance in doxorubicin-selected variants of the human sarcoma cell line MES-SA. Cancer Res. 1985; 45: 4091-4096. PMID: 4028002
    • (1985) Cancer Res , vol.45 , pp. 4091-4096
    • Harker, W.G.1    Sikic, B.I.2
  • 29
    • 0019483542 scopus 로고
    • A Multipotential Leukemia Cell Line (K-562) of Human Origin
    • PMID: 7194480
    • Lozzio BB, Lozzio CB, Bamberger EG, Feliu AS. A Multipotential Leukemia Cell Line (K-562) of Human Origin. Exp Biol Med. 1981; 166: 546-550. doi: 10.3181/00379727-166-41106 PMID: 7194480
    • (1981) Exp Biol Med , vol.166 , pp. 546-550
    • Lozzio, B.B.1    Lozzio, C.B.2    Bamberger, E.G.3    Feliu, A.S.4
  • 30
    • 0025055781 scopus 로고
    • Induction of erythroid differentiation in human leukemic K-562 cells by membrane-directed action of adriamycin covalently bound to microspheres
    • PMID: 2297771
    • Jeannesson P, Trentesaux C, Gèrard B, Jardillier JC, Ross KL, Tökés ZA. Induction of erythroid differentiation in human leukemic K-562 cells by membrane-directed action of adriamycin covalently bound to microspheres. Cancer Res. 1990; 50: 1231-1236. PMID: 2297771
    • (1990) Cancer Res , vol.50 , pp. 1231-1236
    • Jeannesson, P.1    Trentesaux, C.2    Gèrard, B.3    Jardillier, J.C.4    Ross, K.L.5    Tökés, Z.A.6
  • 32
    • 0026660295 scopus 로고
    • Preparation of a monoclonal antibody specific for the class IV isotype of beta-tubulin. Purification and assembly of alpha beta II, alpha beta III, and alpha beta IV tubulin dimers from bovine brain
    • PMID: 1544937
    • Banerjee A, Roach MC, Trcka P, Luduena RF. Preparation of a monoclonal antibody specific for the class IV isotype of beta-tubulin. Purification and assembly of alpha beta II, alpha beta III, and alpha beta IV tubulin dimers from bovine brain. J Biol Chem. 1992; 267: 5625-5630. PMID: 1544937
    • (1992) J Biol Chem , vol.267 , pp. 5625-5630
    • Banerjee, A.1    Roach, M.C.2    Trcka, P.3    Luduena, R.F.4
  • 33
    • 0017646208 scopus 로고
    • Microtubule assembly in vitro
    • PMID: 913395
    • Fellous A, Francon J, Lennon A-M, Nunez J. Microtubule assembly in vitro. Eur J Biochem. 1977; 78: 167-174. doi: 10.1111/j.1432-1033.1977.tb11726.x PMID: 913395
    • (1977) Eur J Biochem , vol.78 , pp. 167-174
    • Fellous, A.1    Francon, J.2    Lennon, A.-M.3    Nunez, J.4
  • 34
    • 0035834521 scopus 로고    scopus 로고
    • Refined structure of αβ-tubulin at 3.5 Å resolution
    • PMID: 11700061
    • Löwe J, Li H, Downing KH, Nogales E. Refined structure of αβ-tubulin at 3.5 Å resolution. J Mol Biol. 2001; 313: 1045-1057. doi: 10.1006/jmbi.2001.5077 PMID: 11700061
    • (2001) J Mol Biol , vol.313 , pp. 1045-1057
    • Löwe, J.1    Li, H.2    Downing, K.H.3    Nogales, E.4
  • 36
    • 0037495965 scopus 로고    scopus 로고
    • Development of polyphosphate parameters for use with the Amber force field
    • PMID: 12759902
    • Meagher KL, Redman LT, Carlson HA. Development of polyphosphate parameters for use with the Amber force field. J Comput Chem. 2003; 24: 1016-1025. doi: 10.1002/jcc.10262 PMID: 12759902
    • (2003) J Comput Chem , vol.24 , pp. 1016-1025
    • Meagher, K.L.1    Redman, L.T.2    Carlson, H.A.3
  • 37
    • 57349090665 scopus 로고    scopus 로고
    • Very fast prediction and rationalization of pKa values for protein - Ligand complexes
    • PMID: 18498103
    • Bas DC, Rogers DM, Jensen JH. Very fast prediction and rationalization of pKa values for protein - ligand complexes. Proteins Struct Funct Bioinforma. 2008; 73: 765-783. doi: 10.1002/prot.22102 PMID: 18498103
    • (2008) Proteins Struct Funct Bioinforma , vol.73 , pp. 765-783
    • Bas, D.C.1    Rogers, D.M.2    Jensen, J.H.3
  • 38
    • 28644432877 scopus 로고    scopus 로고
    • Very fast empirical prediction and rationalization of protein pKa values
    • Li H, Robertson AD, Jensen JH. Very fast empirical prediction and rationalization of protein pKa values. Proteins Struct Funct Bioinforma. 2005; 61: 704-721. doi: 10.1002/prot.20660
    • (2005) Proteins Struct Funct Bioinforma , vol.61 , pp. 704-721
    • Li, H.1    Robertson, A.D.2    Jensen, J.H.3
  • 39
    • 79951476387 scopus 로고    scopus 로고
    • PROPKA3: Consistent treatment of internal and surface residues in empirical pKa predictions
    • Olsson MHM, Søndergaard CR, Rostkowski M, Jensen JH. PROPKA3: consistent treatment of internal and surface residues in empirical pKa predictions. J Chem Theory Comput. 2011; 7: 525-537. doi: 10.1021/ct100578z
    • (2011) J Chem Theory Comput , vol.7 , pp. 525-537
    • Olsson, M.H.M.1    Søndergaard, C.R.2    Rostkowski, M.3    Jensen, J.H.4
  • 40
    • 2942532422 scopus 로고    scopus 로고
    • Development and testing of a general Amber force field
    • PMID: 15116359
    • Wang J, Wolf RM, Caldwell JW, Kollman PA, Case DA. Development and testing of a general Amber force field. J Comput Chem. 2004; 25: 1157-1174. doi: 10.1002/jcc.20035 PMID: 15116359
    • (2004) J Comput Chem , vol.25 , pp. 1157-1174
    • Wang, J.1    Wolf, R.M.2    Caldwell, J.W.3    Kollman, P.A.4    Case, D.A.5
  • 41
    • 0036890178 scopus 로고    scopus 로고
    • Fast, efficient generation of high-quality atomic charges. AM1-BCC model: II. Parameterization and validation
    • PMID: 12395429
    • Jakalian A, Jack DB, Bayly CI. Fast, efficient generation of high-quality atomic charges. AM1-BCC model: II. Parameterization and validation. J Comput Chem. 2002; 23: 1623-1641. doi: 10.1002/jcc.10128 PMID: 12395429
    • (2002) J Comput Chem , vol.23 , pp. 1623-1641
    • Jakalian, A.1    Jack, D.B.2    Bayly, C.I.3
  • 43
    • 0029011701 scopus 로고
    • A second generation force field for the simulation of proteins, nucleic acids, and organic molecules
    • Cornell WD, Cieplak P, Bayly CI, Gould IR, Merz KM, Ferguson DM, et al. A second generation force field for the simulation of proteins, nucleic acids, and organic molecules. J Am Chem Soc. 1995; 117: 5179-5197. doi: 10.1021/ja00124a002
    • (1995) J Am Chem Soc , vol.117 , pp. 5179-5197
    • Cornell, W.D.1    Cieplak, P.2    Bayly, C.I.3    Gould, I.R.4    Merz, K.M.5    Ferguson, D.M.6
  • 44
    • 33748518255 scopus 로고    scopus 로고
    • Comparison of multiple Amber force fields and development of improved protein backbone parameters
    • PMID: 16981200
    • Hornak V, Abel R, Okur A, Strockbine B, Roitberg A, Simmerling C. Comparison of multiple Amber force fields and development of improved protein backbone parameters. Proteins Struct Funct Bioinforma. 2006; 65: 712-725. doi: 10.1002/prot.21123 PMID: 16981200
    • (2006) Proteins Struct Funct Bioinforma , vol.65 , pp. 712-725
    • Hornak, V.1    Abel, R.2    Okur, A.3    Strockbine, B.4    Roitberg, A.5    Simmerling, C.6
  • 45
    • 0034521981 scopus 로고    scopus 로고
    • Calculating structures and free energies of complex molecules: Combining molecular mechanics and continuum models
    • PMID: 11123888
    • Kollman PA, Massova I, Reyes C, Kuhn B, Huo S, Chong L, et al. Calculating structures and free energies of complex molecules: combining molecular mechanics and continuum models. Acc Chem Res. 2000; 33: 889-897. doi: 10.1021/ar000033j PMID: 11123888
    • (2000) Acc Chem Res , vol.33 , pp. 889-897
    • Kollman, P.A.1    Massova, I.2    Reyes, C.3    Kuhn, B.4    Huo, S.5    Chong, L.6
  • 46
    • 84865511407 scopus 로고    scopus 로고
    • The normal-mode entropy in the MM/GBSA method: Effect of system truncation, buffer region, and dielectric constant
    • PMID: 22817270
    • Genheden S, Kuhn O, Mikulskis P, Hoffmann D, Ryde U. The normal-mode entropy in the MM/GBSA method: effect of system truncation, buffer region, and dielectric constant. J Chem Inf Model. 2012; 52: 2079-2088. doi: 10.1021/ci3001919 PMID: 22817270
    • (2012) J Chem Inf Model , vol.52 , pp. 2079-2088
    • Genheden, S.1    Kuhn, O.2    Mikulskis, P.3    Hoffmann, D.4    Ryde, U.5
  • 47
    • 78049489092 scopus 로고    scopus 로고
    • Template-free 13-protofilament microtubule-MAP assembly visualized at 8 A resolution
    • PMID: 20974813
    • Fourniol FJ, Sindelar CV, Amigues B, Clare DK, Thomas G, Perderiset M, et al. Template-free 13-protofilament microtubule-MAP assembly visualized at 8 A resolution. J Cell Biol. 2010; 191: 463-470. doi: 10.1083/jcb.201007081 PMID: 20974813
    • (2010) J Cell Biol , vol.191 , pp. 463-470
    • Fourniol, F.J.1    Sindelar, C.V.2    Amigues, B.3    Clare, D.K.4    Thomas, G.5    Perderiset, M.6
  • 48
    • 84872152615 scopus 로고    scopus 로고
    • Free Energy Profile and Kinetics Studies of Paclitaxel Internalization from the Outer to the Inner Wall of Microtubules
    • Maccari G, Mori M, Rodríguez-Salarichs J, Fang W, Díaz JF, Botta M. Free Energy Profile and Kinetics Studies of Paclitaxel Internalization from the Outer to the Inner Wall of Microtubules. J Chem Theory Comput. 2013; 9: 698-706. doi: 10.1021/ct3006612
    • (2013) J Chem Theory Comput , vol.9 , pp. 698-706
    • Maccari, G.1    Mori, M.2    Rodríguez-Salarichs, J.3    Fang, W.4    Díaz, J.F.5    Botta, M.6
  • 49
    • 0030758777 scopus 로고    scopus 로고
    • Paclitaxel-resistant human ovarian cancer cells have mutant β-tubulins that exhibit impaired paclitaxel-driven polymerization
    • PMID: 9202030
    • Giannakakou P, Sackett DL, Kang Y-K, Zhan Z, Buters JTM, Fojo T, et al. Paclitaxel-resistant human ovarian cancer cells have mutant β-tubulins that exhibit impaired paclitaxel-driven polymerization. J Biol Chem. 1997; 272: 17118-17125. doi: 10.1074/jbc.272.27.17118 PMID: 9202030
    • (1997) J Biol Chem , vol.272 , pp. 17118-17125
    • Giannakakou, P.1    Sackett, D.L.2    Kang, Y.-K.3    Zhan, Z.4    Buters, J.T.M.5    Fojo, T.6
  • 50
    • 0033534629 scopus 로고    scopus 로고
    • High-resolution model of the microtubule
    • PMID: 9989499
    • Nogales E, Whittaker M, Milligan RA, Downing KH. High-resolution model of the microtubule. Cell. 1999; 96: 79-88. doi: 10.1016/S0092-8674(00)80961-7 PMID: 9989499
    • (1999) Cell , vol.96 , pp. 79-88
    • Nogales, E.1    Whittaker, M.2    Milligan, R.A.3    Downing, K.H.4
  • 51
    • 55949090064 scopus 로고    scopus 로고
    • Taxol allosterically alters the dynamics of the tubulin dimer and increases the flexibility of microtubules
    • PMID: 18621813
    • Mitra A, Sept D. Taxol allosterically alters the dynamics of the tubulin dimer and increases the flexibility of microtubules. Biophys J. 2008; 95: 3252-3258. doi: 10.1529/biophysj.108.133884 PMID: 18621813
    • (2008) Biophys J , vol.95 , pp. 3252-3258
    • Mitra, A.1    Sept, D.2
  • 52
    • 84901362834 scopus 로고    scopus 로고
    • High-resolution microtubule structures reveal the structural transitions in αβ-tubulin upon GTP hydrolysis
    • PMID: 24855948
    • Alushin GM, Lander GC, Kellogg EH, Zhang R, Baker D, Nogales E. High-resolution microtubule structures reveal the structural transitions in αβ-tubulin upon GTP hydrolysis. Cell. 2014; 157: 1117-1129. doi: 10.1016/j.cell.2014.03.053 PMID: 24855948
    • (2014) Cell , vol.157 , pp. 1117-1129
    • Alushin, G.M.1    Lander, G.C.2    Kellogg, E.H.3    Zhang, R.4    Baker, D.5    Nogales, E.6
  • 53
    • 20444422149 scopus 로고    scopus 로고
    • The PDBbind database: Methodologies and updates
    • PMID: 15943484
    • Wang R, Fang X, Lu Y, Yang C-Y, Wang S. The PDBbind database: methodologies and updates. J Med Chem. 2005; 48: 4111-4119. doi: 10.1021/jm048957q PMID: 15943484
    • (2005) J Med Chem , vol.48 , pp. 4111-4119
    • Wang, R.1    Fang, X.2    Lu, Y.3    Yang, C.-Y.4    Wang, S.5
  • 54
    • 51649116700 scopus 로고    scopus 로고
    • Intrinsic bending and structural rearrangement of tubulin dimer: Molecular dynamics simulations and coarse-grained analysis
    • PMID: 18515385
    • Gebremichael Y, Chu J-W, Voth GA. Intrinsic bending and structural rearrangement of tubulin dimer: molecular dynamics simulations and coarse-grained analysis. Biophys J. 2008; 95: 2487-2499. doi: 10.1529/biophysj.108.129072 PMID: 18515385
    • (2008) Biophys J , vol.95 , pp. 2487-2499
    • Gebremichael, Y.1    Chu, J.-W.2    Voth, G.A.3
  • 55
    • 66649126344 scopus 로고    scopus 로고
    • Structural mass spectrometry of the alpha beta-tubulin dimer supports a revised model of microtubule assembly
    • PMID: 19388626
    • Bennett MJ, Chik JK, Slysz GW, Luchko T, Tuszynski J, Sackett DL, et al. Structural mass spectrometry of the alpha beta-tubulin dimer supports a revised model of microtubule assembly. Biochemistry (Mosc). 2009; 48: 4858-4870. doi: 10.1021/bi900200q PMID: 19388626
    • (2009) Biochemistry (Mosc) , vol.48 , pp. 4858-4870
    • Bennett, M.J.1    Chik, J.K.2    Slysz, G.W.3    Luchko, T.4    Tuszynski, J.5    Sackett, D.L.6
  • 56
    • 77957763787 scopus 로고    scopus 로고
    • Stathmin and interfacial microtubule inhibitors recognize a naturally curved conformation of tubulin dimers
    • PMID: 20675373
    • Barbier P, Dorléans A, Devred F, Sanz L, Allegro D, Alfonso C, et al. Stathmin and interfacial microtubule inhibitors recognize a naturally curved conformation of tubulin dimers. J Biol Chem. 2010; 285: 31672-31681. doi: 10.1074/jbc.M110.141929 PMID: 20675373
    • (2010) J Biol Chem , vol.285 , pp. 31672-31681
    • Barbier, P.1    Dorléans, A.2    Devred, F.3    Sanz, L.4    Allegro, D.5    Alfonso, C.6
  • 57
    • 79952476602 scopus 로고
    • Intrinsic bending of microtubule protofilaments
    • Grafmüller A, Voth GA. Intrinsic bending of microtubule protofilaments. Struct Lond Engl 1993. 2011; 19: 409-417. doi: 10.1016/j.str.2010.12.020
    • (1993) Struct Lond Engl , vol.19 , pp. 409-417
    • Grafmüller, A.1    Voth, G.A.2
  • 58
    • 84878216080 scopus 로고    scopus 로고
    • Nucleotide-dependent lateral and longitudinal interactions in microtubules
    • PMID: 23541590
    • Grafmüller A, Noya EG, Voth GA. Nucleotide-dependent lateral and longitudinal interactions in microtubules. J Mol Biol. 2013; 425: 2232-2246. doi: 10.1016/j.jmb.2013.03.029 PMID: 23541590
    • (2013) J Mol Biol , vol.425 , pp. 2232-2246
    • Grafmüller, A.1    Noya, E.G.2    Voth, G.A.3
  • 59
    • 84874306104 scopus 로고    scopus 로고
    • Relating nucleotide-dependent conformational changes in free tubulin dimers to tubulin assembly
    • PMID: 23426572
    • Natarajan K, Mohan J, Senapati S. Relating nucleotide-dependent conformational changes in free tubulin dimers to tubulin assembly. Biopolymers. 2013; 99: 282-291. doi: 10.1002/bip.22153 PMID: 23426572
    • (2013) Biopolymers , vol.99 , pp. 282-291
    • Natarajan, K.1    Mohan, J.2    Senapati, S.3
  • 60
    • 84895761836 scopus 로고    scopus 로고
    • The free energy profile of tubulin straight-bent conformational changes, with implications for microtubule assembly and drug discovery
    • PMID: 24516374
    • Peng LX, Hsu MT, Bonomi M, Agard DA, Jacobson MP. The free energy profile of tubulin straight-bent conformational changes, with implications for microtubule assembly and drug discovery. PLoS Comput Biol. 2014; 10: e1003464. doi: 10.1371/journal.pcbi.1003464 PMID: 24516374
    • (2014) PLoS Comput Biol , vol.10
    • Peng, L.X.1    Hsu, M.T.2    Bonomi, M.3    Agard, D.A.4    Jacobson, M.P.5
  • 62
    • 84879540834 scopus 로고    scopus 로고
    • Experimental and computational study of the interaction of novel colchicinoids with a recombinant human αI/βI-tubulin heterodimer
    • PMID: 23480279
    • Mane JY, Semenchenko V, Perez-Pineiro R, Winter P, Wishart D, Tuszynski JA. Experimental and computational study of the interaction of novel colchicinoids with a recombinant human αI/βI-tubulin heterodimer. Chem Biol Drug Des. 2013; 82: 60-70. doi: 10.1111/cbdd.12132 PMID: 23480279
    • (2013) Chem Biol Drug Des , vol.82 , pp. 60-70
    • Mane, J.Y.1    Semenchenko, V.2    Perez-Pineiro, R.3    Winter, P.4    Wishart, D.5    Tuszynski, J.A.6
  • 63
    • 28844499921 scopus 로고    scopus 로고
    • Microtubule interactions with chemically diverse stabilizing agents: Thermodynamics of binding to the paclitaxel site predicts cytotoxicity
    • PMID: 16356844
    • Buey RM, Barasoain I, Jackson E, Meyer A, Giannakakou P, Paterson I, et al. Microtubule interactions with chemically diverse stabilizing agents: thermodynamics of binding to the paclitaxel site predicts cytotoxicity. Chem Biol. 2005; 12: 1269-1279. doi: 10.1016/j.chembiol.2005.09.010 PMID: 16356844
    • (2005) Chem Biol , vol.12 , pp. 1269-1279
    • Buey, R.M.1    Barasoain, I.2    Jackson, E.3    Meyer, A.4    Giannakakou, P.5    Paterson, I.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.