-
1
-
-
84870918230
-
Ribosomally synthesized and post-translationally modified peptide natural products: Overview and recommendations for a universal nomenclature
-
Arnison, P. G., Bibb, M. J., Bierbaum, G., Bowers, A. A., Bugni, T. S., Bulaj, G., Camarero, J. A., Campopiano, D. J., Challis, G. L., Clardy, J., Cotter, P. D., Craik, D. J., Dawson, M., Dittmann, E., Donadio, S., Dorrestein, P. C., Entian, K.-D., Fischbach, M. A., Garavelli, J. S., Göransson, U., Gruber, C. W., Haft, D. H., Hemscheidt, T. K., Hertweck, C., Hill, C., Horswill, A. R., Jaspars, M., Kelly, W. L., Klinman, J. P., Kuipers, O. P., Link, A. J., Liu, W., Marahiel, M. A., Mitchell, D. A., Moll, G. N., Moore, B. S., Müller, R., Nair, S. K., Nes, I. F., Norris, G. E., Olivera, B. M., Onaka, H., Patchett, M. L., Piel, J., Reaney, M. J. T., Rebuffat, S., Ross, R. P., Sahl, H.-G., Schmidt, E. W., Selsted, M. E., Severinov, K., Shen, B., Sivonen, K., Smith, L., Stein, T., Süssmuth, R. E., Tagg, J. R., Tang, G.-L., Truman, A. W., Vederas, J. C., Walsh, C. T., Walton, J. D., Wenzel, S. C., Willey, J. M., and van der Donk, W. A. (2013) Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature Nat. Prod. Rep. 30, 108 - 160
-
(2013)
Nat. Prod. Rep.
, vol.30
, pp. 108-160
-
-
Arnison, P.G.1
Bibb, M.J.2
Bierbaum, G.3
Bowers, A.A.4
Bugni, T.S.5
Bulaj, G.6
Camarero, J.A.7
Campopiano, D.J.8
Challis, G.L.9
Clardy, J.10
Cotter, P.D.11
Craik, D.J.12
Dawson, M.13
Dittmann, E.14
Donadio, S.15
Dorrestein, P.C.16
Entian, K.-D.17
Fischbach, M.A.18
Garavelli, J.S.19
Göransson, U.20
Gruber, C.W.21
Haft, D.H.22
Hemscheidt, T.K.23
Hertweck, C.24
Hill, C.25
Horswill, A.R.26
Jaspars, M.27
Kelly, W.L.28
Klinman, J.P.29
Kuipers, O.P.30
Link, A.J.31
Liu, W.32
Marahiel, M.A.33
Mitchell, D.A.34
Moll, G.N.35
Moore, B.S.36
Müller, R.37
Nair, S.K.38
Nes, I.F.39
Norris, G.E.40
Olivera, B.M.41
Onaka, H.42
Patchett, M.L.43
Piel, J.44
Reaney, M.J.T.45
Rebuffat, S.46
Ross, R.P.47
Sahl, H.-G.48
Schmidt, E.W.49
Selsted, M.E.50
Severinov, K.51
Shen, B.52
Sivonen, K.53
Smith, L.54
Stein, T.55
Süssmuth, R.E.56
Tagg, J.R.57
Tang, G.-L.58
Truman, A.W.59
Vederas, J.C.60
Walsh, C.T.61
Walton, J.D.62
Wenzel, S.C.63
Willey, J.M.64
Van Der Donk, W.A.65
more..
-
2
-
-
84861649020
-
Discovery, biosynthesis, and engineering of lantipeptides
-
Knerr, P. J. and van der Donk, W. A. (2012) Discovery, biosynthesis, and engineering of lantipeptides Annu. Rev. Biochem. 81, 479 - 505
-
(2012)
Annu. Rev. Biochem.
, vol.81
, pp. 479-505
-
-
Knerr, P.J.1
Van Der Donk, W.A.2
-
3
-
-
0942268866
-
Lacticin 481: In vitro reconstitution of lantibiotic synthetase activity
-
Xie, L., Miller, L. M., Chatterjee, C., Averin, O., Kelleher, N. L., and van der Donk, W. A. (2004) Lacticin 481: in vitro reconstitution of lantibiotic synthetase activity Science 303, 679 - 681
-
(2004)
Science
, vol.303
, pp. 679-681
-
-
Xie, L.1
Miller, L.M.2
Chatterjee, C.3
Averin, O.4
Kelleher, N.L.5
Van Der Donk, W.A.6
-
4
-
-
77953528770
-
In vitro biosynthesis of the prepeptide of type-III lantibiotic labyrinthopeptin A2 including formation of a C-C bond as a post-translational modification
-
Müller, W. M., Schmiederer, T., Ensle, P., and Süssmuth, R. D. (2010) In vitro biosynthesis of the prepeptide of type-III lantibiotic labyrinthopeptin A2 including formation of a C-C bond as a post-translational modification Angew. Chem., Int. Ed. 49, 2436 - 2440
-
(2010)
Angew. Chem., Int. Ed.
, vol.49
, pp. 2436-2440
-
-
Müller, W.M.1
Schmiederer, T.2
Ensle, P.3
Süssmuth, R.D.4
-
5
-
-
77950563372
-
Discovery of unique lanthionine synthetases reveals new mechanistic and evolutionary insights
-
Goto, Y., Li, B., Claesen, J., Shi, Y., Bibb, M. J., and van der Donk, W. A. (2010) Discovery of unique lanthionine synthetases reveals new mechanistic and evolutionary insights PLoS Biol. 8, e1000339
-
(2010)
PLoS Biol
, vol.8
, pp. 1000339
-
-
Goto, Y.1
Li, B.2
Claesen, J.3
Shi, Y.4
Bibb, M.J.5
Van Der Donk, W.A.6
-
6
-
-
84925460979
-
Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB
-
Ortega, M. A., Hao, Y., Zhang, Q., Walker, M. C., van der Donk, W. A., and Nair, S. K. (2015) Structure and mechanism of the tRNA-dependent lantibiotic dehydratase NisB Nature 517, 509 - 512
-
(2015)
Nature
, vol.517
, pp. 509-512
-
-
Ortega, M.A.1
Hao, Y.2
Zhang, Q.3
Walker, M.C.4
Van Der Donk, W.A.5
Nair, S.K.6
-
7
-
-
33644854595
-
Structure and mechanism of the lantibiotic cyclase involved in nisin biosynthesis
-
Li, B., Yu, J. P., Brunzelle, J. S., Moll, G. N., van der Donk, W. A., and Nair, S. K. (2006) Structure and mechanism of the lantibiotic cyclase involved in nisin biosynthesis Science 311, 1464 - 1467
-
(2006)
Science
, vol.311
, pp. 1464-1467
-
-
Li, B.1
Yu, J.P.2
Brunzelle, J.S.3
Moll, G.N.4
Van Der Donk, W.A.5
Nair, S.K.6
-
8
-
-
34249747857
-
Mutants of the zinc ligands of lacticin 481 synthetase retain dehydration activity but have impaired cyclization activity
-
Paul, M., Patton, G. C., and van der Donk, W. A. (2007) Mutants of the zinc ligands of lacticin 481 synthetase retain dehydration activity but have impaired cyclization activity Biochemistry 46, 6268 - 6276
-
(2007)
Biochemistry
, vol.46
, pp. 6268-6276
-
-
Paul, M.1
Patton, G.C.2
Van Der Donk, W.A.3
-
9
-
-
79952097307
-
Mechanistic studies of Ser/Thr dehydration catalyzed by a member of the LanL lanthionine synthetase family
-
Goto, Y., Ökesli, A., and van der Donk, W. A. (2011) Mechanistic studies of Ser/Thr dehydration catalyzed by a member of the LanL lanthionine synthetase family Biochemistry 50, 891 - 898
-
(2011)
Biochemistry
, vol.50
, pp. 891-898
-
-
Goto, Y.1
Ökesli, A.2
Van Der Donk, W.A.3
-
10
-
-
3843091511
-
The SapB morphogen is a lantibiotic-like peptide derived from the product of the developmental gene ramS in Streptomyces coelicolor
-
Kodani, S., Hudson, M. E., Durrant, M. C., Buttner, M. J., Nodwell, J. R., and Willey, J. M. (2004) The SapB morphogen is a lantibiotic-like peptide derived from the product of the developmental gene ramS in Streptomyces coelicolor Proc. Natl. Acad. Sci. U.S.A. 101, 11448 - 11453
-
(2004)
Proc. Natl. Acad. Sci. U.S.A.
, vol.101
, pp. 11448-11453
-
-
Kodani, S.1
Hudson, M.E.2
Durrant, M.C.3
Buttner, M.J.4
Nodwell, J.R.5
Willey, J.M.6
-
11
-
-
84868094646
-
Biosynthesis of the class III lantipeptide catenulipeptin
-
Wang, H. and van der Donk, W. A. (2012) Biosynthesis of the class III lantipeptide catenulipeptin ACS Chem. Biol. 7, 1529 - 1535
-
(2012)
ACS Chem. Biol.
, vol.7
, pp. 1529-1535
-
-
Wang, H.1
Van Der Donk, W.A.2
-
12
-
-
84892704003
-
Insights into the evolution of lanthipeptide biosynthesis
-
Yu, Y., Zhang, Q., and van der Donk, W. A. (2013) Insights into the evolution of lanthipeptide biosynthesis Protein Sci. 22, 1478 - 1489
-
(2013)
Protein Sci
, vol.22
, pp. 1478-1489
-
-
Yu, Y.1
Zhang, Q.2
Van Der Donk, W.A.3
-
13
-
-
33751204753
-
Discovery and in vitro biosynthesis of haloduracin, a two-component lantibiotic
-
McClerren, A. L., Cooper, L. E., Quan, C., Thomas, P. M., Kelleher, N. L., and van der Donk, W. A. (2006) Discovery and in vitro biosynthesis of haloduracin, a two-component lantibiotic Proc. Natl. Acad. Sci. U.S.A. 103, 17243 - 17248
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 17243-17248
-
-
McClerren, A.L.1
Cooper, L.E.2
Quan, C.3
Thomas, P.M.4
Kelleher, N.L.5
Van Der Donk, W.A.6
-
14
-
-
77953742146
-
Catalytic promiscuity in the biosynthesis of cyclic peptide secondary metabolites in planktonic marine cyanobacteria
-
Li, B., Sher, D., Kelly, L., Shi, Y., Huang, K., Knerr, P. J., Joewono, I., Rusch, D., Chisholm, S. W., and van der Donk, W. A. (2010) Catalytic promiscuity in the biosynthesis of cyclic peptide secondary metabolites in planktonic marine cyanobacteria Proc. Natl. Acad. Sci. U.S.A. 107, 10430 - 10435
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, pp. 10430-10435
-
-
Li, B.1
Sher, D.2
Kelly, L.3
Shi, Y.4
Huang, K.5
Knerr, P.J.6
Joewono, I.7
Rusch, D.8
Chisholm, S.W.9
Van Der Donk, W.A.10
-
15
-
-
84861624891
-
Structural characterization of four prochlorosins: A novel class of lantipeptides produced by planktonic marine cyanobacteria
-
Tang, W. and van der Donk, W. A. (2012) Structural characterization of four prochlorosins: a novel class of lantipeptides produced by planktonic marine cyanobacteria Biochemistry 51, 4271 - 4279
-
(2012)
Biochemistry
, vol.51
, pp. 4271-4279
-
-
Tang, W.1
Van Der Donk, W.A.2
-
16
-
-
84914150307
-
High divergence of the precursor peptides in combinatorial lanthipeptide biosynthesis
-
Zhang, Q., Yang, X., Wang, H., and van der Donk, W. A. (2014) High divergence of the precursor peptides in combinatorial lanthipeptide biosynthesis ACS Chem. Biol. 9, 2686 - 2694
-
(2014)
ACS Chem. Biol.
, vol.9
, pp. 2686-2694
-
-
Zhang, Q.1
Yang, X.2
Wang, H.3
Van Der Donk, W.A.4
-
17
-
-
84878560267
-
Ribosomally synthesized and post-translationally modified peptide natural products: New insights into the role of leader and core peptides during biosynthesis
-
Yang, X. and van der Donk, W. A. (2013) Ribosomally synthesized and post-translationally modified peptide natural products: new insights into the role of leader and core peptides during biosynthesis Chem.-Eur. J. 19, 7662 - 7677
-
(2013)
Chem. - Eur. J.
, vol.19
, pp. 7662-7677
-
-
Yang, X.1
Van Der Donk, W.A.2
-
18
-
-
84904895638
-
Mechanistic studies on the substrate-tolerant lanthipeptide synthetase ProcM
-
Mukherjee, S. and van der Donk, W. A. (2014) Mechanistic studies on the substrate-tolerant lanthipeptide synthetase ProcM J. Am. Chem. Soc. 136, 10450 - 10459
-
(2014)
J. Am. Chem. Soc.
, vol.136
, pp. 10450-10459
-
-
Mukherjee, S.1
Van Der Donk, W.A.2
-
19
-
-
84919344174
-
A price to pay for relaxed substrate specificity: A comparative kinetic analysis of the class II lanthipeptide synthetases ProcM and HalM2
-
Thibodeaux, C. J., Ha, T., and van der Donk, W. A. (2014) A price to pay for relaxed substrate specificity: a comparative kinetic analysis of the class II lanthipeptide synthetases ProcM and HalM2 J. Am. Chem. Soc. 136, 17513 - 17529
-
(2014)
J. Am. Chem. Soc.
, vol.136
, pp. 17513-17529
-
-
Thibodeaux, C.J.1
Ha, T.2
Van Der Donk, W.A.3
-
20
-
-
79952253258
-
Production of lantipeptides in Escherichia coli
-
The Dhb in the b1 and b2 ions is formed in the mass spectrometer and not by the enzyme, since the fragment is also observed in mHalA2 that has not been exposed to HalM2 (Figure S1, top spectrum). Although the mechanism of fragmentation is not known, similar fragmentation for (methyl)lanthionine rings that contain Dha/Dhb is observed for other lanthipeptides, e.g. and (), - 2341
-
The Dhb in the b1 and b2 ions is formed in the mass spectrometer and not by the enzyme, since the fragment is also observed in mHalA2 that has not been exposed to HalM2 (Figure S1, top spectrum). Although the mechanism of fragmentation is not known, similar fragmentation for (methyl)lanthionine rings that contain Dha/Dhb is observed for other lanthipeptides, e.g., Shi, Y., Yang, X., Garg, N., and van der Donk, W. A. (2011) Production of lantipeptides in Escherichia coli J. Am. Chem. Soc. 133, 2338 - 2341
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 2338
-
-
Shi, Y.1
Yang, X.2
Garg, N.3
Van Der Donk, W.A.4
-
21
-
-
84859450266
-
Geobacillins: Lantibiotics from Geobacillus thermodenitrificans
-
Garg, N., Tang, W., Goto, Y., and van der Donk, W. A. (2012) Geobacillins: lantibiotics from Geobacillus thermodenitrificans Proc. Natl. Acad. Sci. U.S.A. 109, 5241 - 5246
-
(2012)
Proc. Natl. Acad. Sci. U.S.A.
, vol.109
, pp. 5241-5246
-
-
Garg, N.1
Tang, W.2
Goto, Y.3
Van Der Donk, W.A.4
-
22
-
-
84874115767
-
The sequence of the enterococcal cytolysin imparts unusual lanthionine stereochemistry
-
Tang, W. and van der Donk, W. A. (2013) The sequence of the enterococcal cytolysin imparts unusual lanthionine stereochemistry Nat. Chem. Biol. 9, 157 - 159
-
(2013)
Nat. Chem. Biol.
, vol.9
, pp. 157-159
-
-
Tang, W.1
Van Der Donk, W.A.2
-
23
-
-
69349105507
-
Distributive and directional behavior of lantibiotic synthetases revealed by high-resolution tandem mass spectrometry
-
Lee, M. V., Ihnken, L. A., You, Y. O., McClerren, A. L., van der Donk, W. A., and Kelleher, N. L. (2009) Distributive and directional behavior of lantibiotic synthetases revealed by high-resolution tandem mass spectrometry J. Am. Chem. Soc. 131, 12258 - 12264
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 12258-12264
-
-
Lee, M.V.1
Ihnken, L.A.2
You, Y.O.3
McClerren, A.L.4
Van Der Donk, W.A.5
Kelleher, N.L.6
-
24
-
-
84906328199
-
Structural investigation of ribosomally synthesized natural products by hypothetical structure enumeration and evaluation using tandem MS
-
Zhang, Q., Ortega, M., Shi, Y., Wang, H., Melby, J. O., Tang, W., Mitchell, D. A., and van der Donk, W. A. (2014) Structural investigation of ribosomally synthesized natural products by hypothetical structure enumeration and evaluation using tandem MS Proc. Natl. Acad. Sci. U.S.A. 111, 12031 - 12036
-
(2014)
Proc. Natl. Acad. Sci. U.S.A.
, vol.111
, pp. 12031-12036
-
-
Zhang, Q.1
Ortega, M.2
Shi, Y.3
Wang, H.4
Melby, J.O.5
Tang, W.6
Mitchell, D.A.7
Van Der Donk, W.A.8
-
25
-
-
79958862780
-
Transition states and energetics of nucleophilic additions of thiols to substituted alpha,beta-unsaturated ketones: Substituent effects involve enone stabilization, product branching, and solvation
-
Krenske, E. H., Petter, R. C., Zhu, Z., and Houk, K. N. (2011) Transition states and energetics of nucleophilic additions of thiols to substituted alpha,beta-unsaturated ketones: substituent effects involve enone stabilization, product branching, and solvation J. Org. Chem. 76, 5074 - 5081
-
(2011)
J. Org. Chem.
, vol.76
, pp. 5074-5081
-
-
Krenske, E.H.1
Petter, R.C.2
Zhu, Z.3
Houk, K.N.4
-
26
-
-
27644492521
-
Lacticin 481 synthetase phosphorylates its substrate during lantibiotic production
-
Chatterjee, C., Miller, L. M., Leung, Y. L., Xie, L., Yi, M., Kelleher, N. L., and van der Donk, W. A. (2005) Lacticin 481 synthetase phosphorylates its substrate during lantibiotic production J. Am. Chem. Soc. 127, 15332 - 15333
-
(2005)
J. Am. Chem. Soc.
, vol.127
, pp. 15332-15333
-
-
Chatterjee, C.1
Miller, L.M.2
Leung, Y.L.3
Xie, L.4
Yi, M.5
Kelleher, N.L.6
Van Der Donk, W.A.7
-
27
-
-
34547137156
-
Identification of essential catalytic residues of the cyclase NisC involved in the biosynthesis of nisin
-
Li, B. and van der Donk, W. A. (2007) Identification of essential catalytic residues of the cyclase NisC involved in the biosynthesis of nisin J. Biol. Chem. 282, 21169 - 21175
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 21169-21175
-
-
Li, B.1
Van Der Donk, W.A.2
-
28
-
-
70350170630
-
Insights into the mode of action of the two-peptide lantibiotic haloduracin
-
Oman, T. J. and van der Donk, W. A. (2009) Insights into the mode of action of the two-peptide lantibiotic haloduracin ACS Chem. Biol. 4, 865 - 874
-
(2009)
ACS Chem. Biol.
, vol.4
, pp. 865-874
-
-
Oman, T.J.1
Van Der Donk, W.A.2
|